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<identifier>oai:HAL:hal-01480348v1</identifier>
<datestamp>2018-01-11</datestamp>
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<metadata><dc>
<publisher>HAL CCSD</publisher>
<title lang=en>Bipartite graph analyses reveal interdomain LGT involving ultrasmall prokaryotes and their divergent, membrane-related proteins</title>
<creator>Jaffe, Alexander L.</creator>
<creator>Corel, Eduardo, </creator>
<creator>Pathmanathan, Jananan Sylvestre</creator>
<creator>Lopez, Philippe, </creator>
<creator>Bapteste, Eric, </creator>
<contributor>Evolution Paris Seine ; Université des Antilles et de la Guyane (UAG) - Université Pierre et Marie Curie - Paris 6 (UPMC) - Université Nice Sophia Antipolis (UNS) ; Université Côte d'Azur (UCA) - Université Côte d'Azur (UCA) - Centre National de la Recherche Scientifique (CNRS)</contributor>
<description>International audience</description>
<source>ISSN: 1462-2912</source>
<source>EISSN: 1462-2920</source>
<source>Environmental Microbiology</source>
<publisher>Wiley-Blackwell</publisher>
<identifier>hal-01480348</identifier>
<identifier>http://hal.upmc.fr/hal-01480348</identifier>
<identifier>http://hal.upmc.fr/hal-01480348/document</identifier>
<identifier>http://hal.upmc.fr/hal-01480348/file/emi13477.pdf</identifier>
<source>http://hal.upmc.fr/hal-01480348</source>
<source>Environmental Microbiology, Wiley-Blackwell, 2016, 18 (12), pp.5072 - 5081. 〈10.1111/1462-2920.13477〉</source>
<identifier>DOI : 10.1111/1462-2920.13477</identifier>
<relation>info:eu-repo/semantics/altIdentifier/doi/10.1111/1462-2920.13477</relation>
<language>en</language>
<subject>[SDV] Life Sciences [q-bio]</subject>
<type>info:eu-repo/semantics/article</type>
<type>Journal articles</type>
<description lang=en>Based on their small size and genomic properties, ultrasmall prokaryotic groups like the Candidate Phyla Radiation have been proposed as possible symbionts dependent on other bacteria or archaea. In this study, we use a bipartite graph analysis to examine patterns of sequence similarity between draft and complete genomes from ultrasmall bacteria and other complete prokaryotic genomes, assessing whether the former group might engage in significant gene transfer (or even endosymbioses) with other community members. Our results provide preliminary evidence for many lateral gene transfers with other prokaryotes, including members of the archaea, and report the presence of divergent, membrane-associated proteins among these ultrasmall taxa. In particular, these divergent genes were found in TM6 relatives of the intracellular parasite Babela massiliensis.</description>
<rights>http://creativecommons.org/licenses/by/</rights>
<date>2016-12</date>
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