Éditeur(s) : Wiley / Blackwell
Résumé : A new marine benthic Prorocentrum species from sandy habitats of South Brittany (northwestern France), P. consutum sp. nov., is described using LM and SEM and molecular phylogenetic analyses. Cells have a subcircular to broadly ovoid shape and are plainly flattened. They are 57-61 lm long and 52-55 lm wide. A central pyrenoid is present, and the kidney-shaped nucleus is positioned in the posterior region. In right valve view, the periflagellar area is deeply excavated, and the left valve forms a prominent apical ridge. The periflagellar area consists of nine platelets, and a small narrow collar is present around the flagellar pore. The ornamentation of this new species is very peculiar and is characterized by a ring of round areolae located at the periphery of the valves, each areola containing three or four pores. Apart from this ring of areolae, the cell surface is smooth and with scattered pores. Pores are not present in the center of the right or left valve. The intercalary band is generally narrow and faintly striated horizontally. The molecular phylogenetic position of P. consutum sp. nov. was inferred using SSU and LSU rDNA. In both analyses, this species branched with high support in the clade comprising species with a symmetric shape and appeared to be a sister group to that formed by P. lima and other tropical benthic species, such as P. arenarium, P. belizeanum, P. hoffmannianum, and P. maculosum.
Journal of Phycology (0022-3646) (Wiley / Blackwell), 2010-02 , Vol. 46 , N. 1 , P. 183-194

Droits : 2010 Wiley Blackwell Publishing, Inc. Phycological Society of America
http://archimer.ifremer.fr/doc/2010/publication-7449.pdf
DOI:10.1111/j.1529-8817.2009.00774.x
http://archimer.ifremer.fr/doc/00000/7449/

Éditeur(s) : HAL CCSD
Résumé : National audience
La sédimentation en baie du Mont Saint Michel se caractérise par la mixité des apports, presque exclusivement d’origine marine, carbonatés et silicoclastiques. La question du comblement de cet environnement hypertidal et de l’évolution de son trait de côte, représenté dans le fond de baie (sud et ouest) par des barrières coquillières, se pose à l’horizon des décennies à venir. Comment ce comblement va t-il être affecté par le changement climatique global marqué entre autres par l’accélération de la remontée du niveau marin et par des modifications potentielles de faunes (habitats, espèces..etc) auxquelles peut également contribuer le développement d’activités humaines comme la conchyliculture ?Les travaux présentés ici (projet Sédibaie, DDTM35 / Région Basse Normandie) ont pour objectif de quantifier le taux de sédimentation dans le fond de baie du Mont-Saint-Michel depuis les derniers siècles, et cela afin d’appréhender les tendances à venir. Pour ce faire des carottages courts (moy. 75 cm) ont été réalisés selon 5 radiales côte-large réparties de St Benoit des Ondes (près de Cancale) à La Chapelle Ste Anne (à l’Ouest du Mt St Michel). Les carottes ont fait l’objet d’analyses variées (faciès, granulométrie, teneur en carbonate, XRF, Scopix, datations 14C...). Un échantillonnage de surface a également été réalisé afin de caractériser les assemblages faunistiques actuels (malacofaune, microfaune, vivant, mort). Parallèlement, des travaux spécifiques sont menés sur les barrières coquillières (stratigraphie THR, évolution contenu faunistique, processus d’édification..). Les enregistrements étudiés sur les carottes couvrent la sédimentation du dernier millénaire au moins. Ils mettent en évidence le passage entre un environnement de dépôt dominé par l’action des marées, à un environnement de plus haute énergie, sans doute dominé par l’action des houles (tempêtes ?). Ce changement majeur, visible sur quasiment toutes les carottes à une profondeur variant entre 30 et 50 cm, s’opère peu après 1000 ans cal. BP. (à confirmer). Il est attribué à un changement climatique d’échelle au moins régionale (Atlantique nord). La complexite de l’enregistrement sédimentaire au-dessus du passage tidal/houle met en évidence une variabilité de faciès sédimentaires à haute fréquence, probablement liée à une fluctuation du climat de houle (NAO, Petit Age Glaciaire), ainsi que dans la partie supérieure à des changements d’apports bioclastiques relatifs au développement des installations conchylicoles.
25e Réunion des Sciences de la Terre
Caen, France

hal-01413154
https://hal.archives-ouvertes.fr/hal-01413154

Éditeur(s) : Elsevier
Résumé : The ability of captive-reared turtles to survive in the wild is not precisely known, nor are movements of immature turtles in the open ocean. To provide information on these issues, a satellite tracking experiment was conducted in the western Indian Ocean to monitor oceanic movements of immature green turtles. Two wild turtles and four captive-reared individuals were tracked. The latter had been displaced after birth from nesting sites to a distant rearing site. Wild turtles survived after release, but did not move far away from release site. We hypothesize that this resident behaviour may be explained by stage-specific habitat requirements. Captive-reared turtles survived after release and migrated over thousands of kilometres. Among these, the oldest immature turtles retrieved the foraging sites of their native population, with movement patterns similar to those displayed by adults. Observed movements may be linked to hydrographic conditions such as general oceanic circulation, sea temperature and thermal fronts. (C) 2003 Editions scientifiques et medicales Elsevier SAS and Ifremer/IRD/Inra/Cemagref. All rights reserved.
Aquatic Living Resources (0990-7440) (Elsevier), 2003 , Vol. 16 , N. 1 , P. 35-41

Droits : 2003 Ifremer/IRD/Inra/Cemagref. Published by Elsevier, Paris
http://archimer.ifremer.fr/doc/2003/publication-573.pdf
DOI:10.1016/S0990-7440(03)00005-6
http://archimer.ifremer.fr/doc/00000/573/

Résumé : Le cycle biologique du principal stock de crevettes pénéïdes (Penaeus subtilis) exploité sur le plateau continental guyanais est court (18 mois environ). Les variabilités intra et inter annuelles de l'abondance des individus appartenant aux différentes composantes des premières phases du cycle (larves, post-larves, juvéniles) sont considérées comme très fortes, ce phénomène étant exacerbé par le double changement de milieu au cours du cycle, passage d'un habitat en eau salée à celui en eau douce, puis retour au premier. La pêcherie de la flottille crevettière guyanaise est ainsi basée sur un stock au renouvellement rapide et variable, aussi l'optimisation de sa gestion implique une meilleure compréhension des mécanismes de recrutement des crevettes et notamment leur facteurs de variation. Ainsi, depuis octobre 1992 une étude est conduite pour analyser ces mécanismes de recrutement. Elle s'intègre dans un programme de coopération régionale entre l'IFREMER et le Ministère de l'Agriculture, de l'Elevage et des Pêches du Surinam financé par des fonds FEDER et du FIC, et elle est menée par l'IFREMER dans la Zone Economique Exclusive française et par le laboratoire du Département des pêches du Surinam sur le plateau surinamien. Le programme prévoit une série de huit campagnes en mer qui seront conduites en parallèle par chacun des deux laboratoires Français et Surinarnien sur les plateaux de Guyane (campagnes RESUBGUY) et du Surinam (campagnes RESUBSUR) afin d'analyser le phénomène de recrutement sur la plus large échelle possible d'observation (plateau guyano-surinamien). Deux campagnes annuelles ont été programmées pour chaque pays, en mai et en octobre. La périodicité de ces campagnes est fonction des résultats des travaux conduits par l'IFREMER et l'ORSTOM sur la phase pré-recrutée de Penaeus subtilis qui ont mis en évidence deux principales périodes annuelles distinctes de recrutement (avril-mai; septembre-octobre). Cette campagne est la quatrième de la série initiée en octobre 1992. L'étude n'est pas limitée à l'examen des seules captures de crevettes Penaeus subtilis, puisqu'elle incluse également l'analyse de la composition des prises accessoires des crevettiers. Les "by-catches" considérées dans ce travail sont surtout représentées par la crevette "sea-bob", Xiphopenaeus kroyeri, ainsi que par les principales espèces de poissons d'intérêt commercial (ou ayant une forte probabilité de le devenir dans un futur proche). Enfin, une attention particulière a également été portée sur les captures accidentelles de tortues marines afin d’en estimer l’importance réelle.

Droits : 1994 Ifremer
http://archimer.ifremer.fr/doc/00076/18750/16321.pdf
http://archimer.ifremer.fr/doc/00076/18750/

Éditeur(s) : Elsevier Science Bv
Résumé : Underwater video techniques are increasingly used in marine ecology studies. Technological progress regarding video cameras, sensors (such as sounders), battery life and information storage make these techniques now accessible to a majority of users. However, diver-based underwater visual censuses, and catch and effort data, remain the most commonly used for observing coastal biodiversity and species. In this paper, we review the underwater video techniques that have been developed since the 1950s to investigate and/or monitor coastal biodiversity. Techniques such as remote underwater video, whether baited or not, diver-operated video and towed video are described, along with corresponding applications in the field. We then analyse the complementary of techniques, first from studies comparing video techniques with other observation techniques, whether video-based or not, and second by documenting their respective cost efficiencies. These findings are discussed with respect to current challenges in monitoring and investigating coastal biodiversity. Video should be more often considered and used, either in addition to or as an alternative to diver-based, fishing and acoustic techniques, as it may be particularly suited for monitoring coastal biodiversity in a variety of areas and on larger scales than hitherto and within an ecosystem-based approach to management and conservation.
Fisheries Research (0165-7836) (Elsevier Science Bv), 2014-06 , Vol. 154 , P. 44-62

Droits : 2014 Elsevier B.V. All rights reserved.
http://archimer.ifremer.fr/doc/00181/29274/27901.pdf
DOI:10.1016/j.fishres.2014.01.019
http://archimer.ifremer.fr/doc/00181/29274/

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : International audience
Marine organisms are under threat globally from a suite of anthropogenic sources, but the current emphasis on global climate change has deflected the focus from local impacts. While the effect of increased sedimentation on the settlement of coral species is well studied, little is known about the impact on larval fish. Here, the effect of a laterite “red soil” sediment pollutant on settlement behaviour and post-settlement performance of reef fish was tested. In aquarium tests that isolated sensory cues, we found significant olfaction-based avoidance behaviour and disruption of visual cue use in settlement-stage larval fish at 50 mg L−1, a concentration regularly exceeded in situ during rain events. In situ light trap catches showed lower abundance and species richness in the presence of red soil, but were not significantly different due to high variance in the data. Prolonged exposure to red soil produced altered olfactory cue responses, whereby fish in red soil made a likely maladaptive choice for dead coral compared to controls where fish chose live coral. Other significant effects of prolonged exposure included decreased feeding rates and body condition. These effects on fish larvae reared over 5 days occurred in the presence of a minor drop in pH and may be due to the chemical influence of the sediment. Our results show that sediment pollution of coral reefs may have more complex effects on the ability of larval fish to successfully locate suitable habitat than previously thought, as well as impacting on their post-settlement performance and, ultimately, recruitment success.
ISSN: 0029-8549

hal-01270670
https://hal-univ-perp.archives-ouvertes.fr/hal-01270670
DOI : 10.1007/s00442-015-3367-6

Éditeur(s) : Elsevier
Résumé : Bioaccumulation is difficult to document because responses differ among chemical compounds, with environmental conditions, and physiological processes characteristic of each species. We use a mechanistic model, based on the Dynamic Energy Budget (DEB) theory, to take into account this complexity and study factors impacting accumulation of organic pollutants in fish through ontogeny. The bioaccumulation model proposed is a comprehensive approach that relates evolution of hake PCB contamination to physiological information about the fish, such as diet, metabolism, reserve and reproduction status. The species studied is the European hake (Merluccius merluccius, L. 1758). The model is applied to study the total concentration and the lipid normalised concentration of 4 PCB congeners in male and female hakes from the Gulf of Lions (NW Mediterranean sea) and the Bay of Biscay (NE Atlantic ocean). Outputs of the model compare consistently to measurements over the life span of fish. Simulation results clearly demonstrate the relative effects of food contamination, growth and reproduction on the PCB bioaccumulation in hake. The same species living in different habitats and exposed to different PCB prey concentrations exhibit marked difference in the body accumulation of PCBs. At the adult stage, female hakes have a lower PCB concentration compared to males for a given length. We successfully simulated these sex-specific PCB concentrations by considering two mechanisms: a higher energy allocation to growth for females and a transfer of PCBs from the female to its eggs when allocating lipids from reserve to eggs. Finally, by its mechanistic description of physiological processes, the model is relevant for other species and sets the stage for a mechanistic understanding of toxicity and ecological effects of organic contaminants in marine organisms.
Journal of Sea Research (1385-1101) (Elsevier), 2009-10 , Vol. 62 , N. 2-3 , P. 124-134

Droits : 2009 Elsevier B.V. All rights reserved.
http://archimer.ifremer.fr/doc/2009/publication-6789.pdf
DOI:10.1016/j.seares.2009.02.006
http://archimer.ifremer.fr/doc/00000/6789/

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : International audience
Marine organisms are under threat globally from a suite of anthropogenic sources, but the current emphasis on global climate change has deflected the focus from local impacts. While the effect of increased sedimentation on the settlement of coral species is well studied, little is known about the impact on larval fish. Here, the effect of a laterite “red soil” sediment pollutant on settlement behaviour and post-settlement performance of reef fish was tested. In aquarium tests that isolated sensory cues, we found significant olfaction-based avoidance behaviour and disruption of visual cue use in settlement-stage larval fishat 50 mg L−1, a concentration regularly exceeded in situ during rain events. In situ light trap catches showed lower abundance and species richness in the presence of red soil, but were not significantly different due to high variance in the data. Prolonged exposure to red soil produced altered olfactory cue responses, whereby fish in red soil made a likely maladaptive choice for dead coral compared to controls where fish chose live coral. Other significant effects of prolonged exposure included decreased feeding rates and body condition. These effects on fish larvae reared over 5 days occurred in the presence of a minor drop in pH and may be due to the chemical influence of the sediment. Our results show that sediment pollution of coral reefs may have more complex effects on the ability of larval fish to successfully locate suitable habitat than previously thought, as well as impacting on their post-settlement performance and, ultimately, recruitment success.
ISSN: 0029-8549

hal-01346933
https://hal-uvsq.archives-ouvertes.fr/hal-01346933
https://hal-uvsq.archives-ouvertes.fr/hal-01346933/document
https://hal-uvsq.archives-ouvertes.fr/hal-01346933/file/ms%20O%27Connor%20et%20al%20%202014%20%28Oecologia%29.pdf
PUBMED : 26080759

Éditeur(s) : Elsevier
Résumé : Changes in biodiversity may disrupt the ecological functions performed by species assemblages. Hence, we urgently need to examine the implications of biodiversity loss not only in terms of species conservation but also in terms of sustainability of ecosystem services. The ability of protected areas to maintain local species richness has been clearly demonstrated. However, preserving goods and services provided by ecosystems requires not only the conservation of species richness but also the conservation of the most 'original' species, i.e. the ones with the highest average rarity of their attributes which are likely to perform some unique functions in ecosystems. We proposed a new conservation of biological originality (CBO) index as well as associated randomization tests to quantify the ability of piotected areas to maintain viable populations for the most original species. As an application, we used long-term fisheries data collected in the Bonifacio Strait Natural Reserve (BSNR) to determine the species which benefited from the protection reinforcement in 1999. We also estimated a set of 14 ecomorphological functional traits on the 37 fish species caught in the BSNR and we obtained a functional originality value for each species. As a result, we found that functional originality was significantly protected in the fish assemblage of the BSNR: species with the most original functional trait combinations became more abundant after 1999. Our finding suggests that protecting most original species is an insurance against functional diversity erosion in the BSNR. More generally, our new index can be used to test whether protected areas may protect preferentially the most original species and whether restorative management promotes the reestablishment of the most original species with particular habitat requirements. (c) 2008 Elsevier Ltd. All rights reserved.
Biological Conservation (0006-3207) (Elsevier), 2008-06 , Vol. 141 , N. 6 , P. 1569-1580

Droits : 2008 Elsevier Ltd All rights reserved.
http://archimer.ifremer.fr/doc/2008/publication-4480.pdf
DOI:10.1016/j.biocon.2008.04.002
http://archimer.ifremer.fr/doc/00000/4480/