Éditeur(s) : HAL CCSD IRD
Résumé : International audience
Malaria remains a major health problem in French Guiana despite the decrease in the number of cases since 2010. A previous study in Camopi, an Amerindian village on the Oyapock River, revealed that Plasmodium falciparum malaria incidence was significantly related to landscape features and that its spatial distribution exhibited some obvious patterns. In the present study, we first identified the spatial patterns that exhibit a significant Moran's index of spatial auto-correlation and that significantly explain P. falciparum malaria incidence within the multiple linear regression framework. Secondly, we linked these patterns with remotely sensed environmental features. The selected model is composed of five spatial components: three patterns, representing 50.7% of the total variance, are associated with large scale variations of the incidence, and the remaining patterns are associated with local scale variations and represent 28.7% of the total variance. Different hamlet clusters that have specificities in terms of P. falciparum malaria incidence rate, environmental characteristics and mosquito control strategies have been identified. The methodology proposed in the present study can provide useful knowledge on the spatial distribution of the P. falciparum malaria incidence in Camopi at different scales and on possible explanation of such distribution, as a function of the scale.
Symposium of the Latin American Society for Remote Sensing and Spatial Information Systems (SELPER)
Cayenne, French Guiana

ird-00797353
http://hal.ird.fr/ird-00797353
http://hal.ird.fr/ird-00797353/document
http://hal.ird.fr/ird-00797353/file/Roux_et_al_SELPER_2012.pdf
IRD : fdi:010058342

Éditeur(s) : Ieee-inst Electrical Electronics Engineers Inc
Résumé : The synthetic aperture radar (SAR) Doppler centroid has been used to estimate the scatter line-of-sight radar velocity. In weak to moderate ocean surface current environment, the SAR Doppler centroid is dominated by the directionality and strength of wave-induced ocean surface displacements. In this paper, we show how this sea state signature can be used to improve surface wind retrieval from SAR. Doppler shifts of C-band radar return signals from the ocean are thoroughly investigated by colocating wind measurements from the ASCAT scatterometer with Doppler centroid anomalies retrieved from Envisat ASAR. An empirical geophysical model function (CDOP) is derived, predicting Doppler shifts at both VV and HH polarization as function of wind speed, radar incidence angle, and wind direction with respect to radar look direction. This function is used into a Bayesian inversion scheme in combination with wind from a priori forecast model and the normalized radar cross section (NRCS). The benefit of Doppler for SAR wind retrieval is shown in complex meteorological situations such as atmospheric fronts or low pressure systems. Using in situ information, validation reveals that this method helps to improve the wind direction retrieval. Uncertainty of the calibration of Doppler shift from Envisat ASAR hampers the inversion scheme in cases where NRCS and model wind are accurate and in close agreement. The method is however very promising with respect of future SAR missions, in particular Sentinel-1, where the Doppler centroid anomaly will be more robustly retrieved.
Ieee Transactions On Geoscience And Remote Sensing (0196-2892) (Ieee-inst Electrical Electronics Engineers Inc), 2012-07 , Vol. 50 , N. 7 , P. 2901-2909

Droits : 2012 IEEE
http://archimer.ifremer.fr/doc/00088/19896/17554.pdf
DOI:10.1109/TGRS.2011.2174998
http://archimer.ifremer.fr/doc/00088/19896/

Éditeur(s) : HAL CCSD BioMed Central
Résumé : International audience
The natural history of pulmonary Langerhans cell histiocytosis (PLCH) has been unclear due to the absence of prospective studies. The rate of patients who experience an early progression of their disease is unknown. Additionally, conflicting effects of smoking cessation on the outcome of PLCH have been reported. In this prospective, multicentre study, 58 consecutive patients with newly diagnosed PLCH were comprehensively evaluated over a two-year period. Our objectives were to estimate the incidence of early progression of the disease and to evaluate the impact of smoking status on lung function outcomes. Lung function deterioration was defined as a decrease of at least 15% in FEV1 and/or FVC and/or DLCO, compared with baseline values. At each visit, smoking status was recorded based on the patients' self-reports and urinary cotinine measurements that were blinded for the patients. The cumulative incidence of lung function outcomes over time was estimated using the non-parametric Kaplan-Meier method. Multivariate Cox models with time-dependent covariates were used to calculate the hazards ratios of the lung function deterioration associated with smoking status with adjustment for potential confounders. The cumulative incidence of lung function deterioration at 24 months was 38% (22% for FEV1 and DLCO, and 9% for FVC). In the multivariate analysis, smoking status and PaO2 at inclusion were the only factors associated with the risk of lung function deterioration. The patients' smoking statuses markedly changed over time. Only 20% of the patients quit using tobacco for the entire study period. Nevertheless, being a non-smoker was associated with a decreased risk of subsequent lung function deterioration, even after adjustment for baseline predictive factors. By serial lung computed tomography, the extent of cystic lesions increased in only 11% of patients. Serial lung function evaluation on a three- to six-month basis is essential for the follow-up of patients with recently diagnosed PLCH to identify those who experience an early progression of their disease. These patients are highly addicted to tobacco, and robust efforts should be undertaken to include them in smoking cessation programs. ClinicalTrials.gov: No: NCT01225601 .
ISSN: 1750-1172

hal-01146047
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01146047
PUBMED : 25887097
DOI : 10.1186/s13023-015-0249-2

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Seismic anisotropy originating within the continental crust is used to determine kinematic flow lines within active mountain belts and is widely attributed to regionally aligned mica. However, naturally deformed micaceous rocks commonly show composite (e.g. S-C) fabrics. It is necessary therefore to understand how both varying mica content and differing intensities of multiple foliations impact on seismic interpretations in terms of deformation fields. An outcrop analogue for granitic mid-crustal deformed zones is used here to calibrate the seismic response against both parameters. Seismic responses are modelled using crystallographic preferred orientations for polymineralic, micaceous granitic gneisses, measured using Electron Back-Scatter Diffraction. The sample results are generalised by modelling the effects of variations in modal composition and the relative importance of deformation fabrics of variable orientation, so-called rock and fabric recipes. The maximum P- and S-anisotropy are calculated at 16.6% and 23.9% for single-foliation gneisses but for mixed (i.e. S-C) foliation gneisses these values reduce to 5.8% and 7.5% respectively. Furthermore, mixtures of multiple foliations generate significant variations in the geometry of the seismic anisotropy. This effect, coupled with the geographical orientation of fabrics in nature. can generate substantial variations in the orientation and magnitude of seismic anisotropy (especially for shear waves) as measured for the continental crust using existing receiver function and teleseismic near-vertical incidence methods. Thus, maps of seismic anisotropy varying with depth in deforming continents need not imply necessarily depth-varying deformation kinematics and tectonic decoupling.
ISSN: 0012-821X

hal-00445247
https://hal.archives-ouvertes.fr/hal-00445247
DOI : 10.1016/j.epsl.2009.09.035

Éditeur(s) : HAL CCSD Wiley
Résumé : International audience
ISSN: 0021-8901

hal-01093618
https://hal-agroparistech.archives-ouvertes.fr/hal-01093618
DOI : 10.1111/j.1365-2664.2010.01826.x

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
We developed a new granular material (MatIV) to study experimentally landscape evolution in active mountain belt piedmonts. Its composition and related physical properties have been determined using empirical criteria derived from the scaling of deformation, erosion-transport and sedimentation natural processes. MatIV is a water-saturated composite material made up with 4 granular components (silica powder, glass microbeads, plastic powder and graphite) whose physical, mechanical and erosion-related properties were measured with different laboratory tests. Mechanical measurements were made on a modified Hubbert-type direct shear apparatus. Erosion-related properties were determined using an experimental set-up that allows quantifying the erosion/sedimentation budget from tilted relaxation topographies. For MatIV, we also investigated the evolution of mean erosion rates and stream power erosion law exponents in 1D as a function of slope.;Our results indicate that MatIV satisfies most of the defined criteria. It deforms brittlely according to the linear Mohr-Coulomb failure criterion and localizes deformation along discrete faults. Its erosion pattern is characterized by realistic hillslope and channelized processes (slope diffusion, mass wasting, channel incision). During transport, eroded particles are sorted depending on their density and shape, which results in stratified alluvial deposits displaying lateral fades variations. To evaluate the degree of similitude between model and nature, we used a new experimental device that combines accretionary wedge deformation mechanisms and surface runoff erosion processes. Results indicate that MatIV succeeded in producing detailed morphological and sedi-mentological features (drainage basin, channel network, terrace, syntectonic alluvial fan). Geometric, kinematic and dynamic similarity criteria have been investigated to compare precisely model to nature. Although scaling is incomplete, it yields particularly informative orders of magnitude. With all these characteristics, MatIV appears as a very promising material to investigate experimentally a wide range of scientific questions dealing with relief dynamics and interactions between tectonics, erosion and sedimentation processes.
ISSN: 0040-1951

hal-00669904
https://hal.archives-ouvertes.fr/hal-00669904
DOI : 10.1016/j.tecto.2011.09.029

Éditeur(s) : HAL CCSD Kluwer Academic Publishers
Résumé : International audience
The interlocking leaves of tank-forming bromeliads (Bromeliaceae) collect rainwater and detritus, thus creating a freshwater habitat for specialized organisms. Their abundance and the possibility of quantifying communities with accuracy give us unparalleled insight into how changes in local to regional environments influence community diversity in small water bodies. We sampled 365 bromeliads (365 invertebrate communities) along a southeastern to northwestern range in French Guiana. Geographic locality determined the species pool for bromeliad invertebrates, and local environments determined the abundance patterns through the selection of traits that are best adapted to the bromeliad habitats. Patterns in community structure mostly emerged from patterns of predator species occurrence and abundance across local-regional environments, while the set of detritivores remained constant. Water volume had a strong positive correlation with invertebrate diversity, making it a biologically relevant measure of the pools' carrying capacity. The significant effects of incoming detritus and incident light show that changes in local environments (e.g., the conversion of forest to cropping systems) strongly influence freshwater communities. Because changes in local environments do not affect detritivores and predators equally, one may expect functional shifts as sets of invertebrates with particular traits are replaced or complemented by other sets with different traits.
Hydrobiologia

hal-00845572
https://hal.archives-ouvertes.fr/hal-00845572

Éditeur(s) : HAL CCSD Wiley
Résumé : The intensification of the hydrological cycle, with an observed and modeled increase in drought incidence and severity, underscores the need to quantify drought effects on carbon cycling and the terrestrial sink. FLUXNET, a global network of eddy covariance towers, provides dense data streams of meteorological data, and through flux partitioning and gap filling algorithms, estimates of net ecosystem productivity (FNEP), gross ecosystem productivity (P), and ecosystem respiration (R). We analyzed the functional relationship of these three carbon fluxes relative to evaporative fraction (EF), an index of drought and site water status, using monthly data records from 238 micrometeorological tower sites distributed globally across 11 biomes. The analysis was based on relative anomalies of both EF and carbon fluxes and focused on drought episodes by biome and climatic season. Globally P was ≈50% more sensitive to a drought event than R. Network-wide drought-induced decreases in carbon flux averaged −16.6 and −9.3 g C m−2 month−1 for P and R, i.e., drought events induced a net decline in the terrestrial sink. However, in evergreen forests and wetlands drought was coincident with an increase in P or R during parts of the growing season. The most robust relationships between carbon flux and EF occurred during climatic spring for FNEP and in climatic summer for P and R. Upscaling flux sensitivities to a global map showed that spatial patterns for all three carbon fluxes were linked to the distribution of croplands. Agricultural areas exhibited the highest sensitivity whereas the tropical region had minimal sensitivity to drought. Combining gridded flux sensitivities with their uncertainties and the spatial grid of FLUXNET revealed that a more robust quantification of carbon flux response to drought requires additional towers in all biomes of Africa and Asia as well as in the cropland, shrubland, savannah, and wetland biomes globally.
ISSN: 1354-1013

hal-01032076
https://hal.archives-ouvertes.fr/hal-01032076
DOI : 10.1111/j.1365-2486.2009.01991.x

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
This paper provides a synthesis of current data and interpretations on the crustal structure of the Pyrenean-Cantabrian orogenic belt, and presents new tectonic models for representative transects. The Pyrenean orogeny lasted from Santonian (~84 Ma) to early Miocene times (~20 Ma), and consisted of a spatial and temporal succession of oceanic crust/exhumed mantle subduction, rift inversion and continental collision processes at the Iberia-Eurasia plate boundary. A good coverage by active-source (vertical-incidence and wide-angle reflection) and passive-source (receiver functions) seismic studies, coupled with surface data have led to a reasonable knowledge of the present-day crustal architecture of the Pyrenean-Cantabrian belt, although questions remain. Seismic imaging reveals a persistent structure, from the central Pyrenees to the central Cantabrian Mountains, consisting of a wedge of Eurasian lithosphere indented into the thicker Iberian plate, whose lower crust is detached and plunges northwards into the mantle. For the Pyrenees, a new scheme of relationships between the southern upper crustal thrust sheets and the Axial Zone is here proposed. For the Cantabrian belt, the depth reached by the N-dipping Iberian crust and the structure of the margin are also revised.The common occurrence of lherzolite bodies in the northern Pyrenees and the seismic velocity and potential field record of the Bay of Biscay indicate that the precursor of the Pyrenees was a hyperextended and strongly segmented rift system, where narrow domains of exhumed mantle separated the thinned Iberian and Eurasian continental margins since the Albian-Cenomanian. The exhumed mantle in the Pyrenean rift was largely covered by a Mesozoic sedimentary lid that had locally glided along detachments in Triassic evaporites. Continental margin collision in the Pyrenees was preceded by subduction of the exhumed mantle, accompanied by the pop-up thrust expulsion of the off-scraped sedimentary lid above. To the west, oceanic subduction of the Bay of Biscay under the North Iberian margin is supported by an upper plate thrust wedge, gravity and magnetic anomalies, and 3D inclined sub-crustal reflections. However, discrepancies remain for the location of continent-ocean transitions in the Bay of Biscay and for the extent of oceanic subduction. The plate-kinematic evolution during the Mesozoic, which involves issues as the timing and total amount of opening, as well as the role of strike-slip drift, is also under debate, discrepancies arising from first-order interpretations of the adjacent oceanic magnetic anomaly record.
ISSN: 0040-1951

insu-01683989
https://hal-insu.archives-ouvertes.fr/insu-01683989
https://hal-insu.archives-ouvertes.fr/insu-01683989/document
https://hal-insu.archives-ouvertes.fr/insu-01683989/file/teixell-tectono-2018.pdf
DOI : 10.1016/j.tecto.2018.01.009