Éditeur(s) : HAL CCSD
Résumé : International audience
In French Polynesia the cases of leprosy are individually severe, like in Asia, but the endemy always stood under a relatively low level. A strong campaign of chemiotherapy has been conducted for 25 years. Unfortunatly the actions of systematic detection of new cases are not sufficient and the sanitary education is almost non existent. The territory is actualy reached by deep demographic and social upsettings and chemiotherapy used alone is not enough efficient to obtain a definitive decrease of the endemy or even to avoid, for a long time, a new increase. However a significant decrease of the age of advent of the decrease must be credited to the action of chemiotherapy.
Bull Soc Pathol Exot Filiales

hal-00715415
https://hal.univ-antilles.fr/hal-00715415
PUBMED : 1037614

Éditeur(s) : HAL CCSD Oxford University Press (OUP): Policy C - Option B
Résumé : International audience
We report the characterization of a DNA primase/ polymerase protein (PolpTN2) encoded by the pTN2 plasmid from Thermococcus nautilus. Sequence analysis revealed that this protein corresponds to a fusion between an N-terminal domain homologous to the small catalytic subunit PriS of heterodimeric archaeal and eukaryotic primases (AEP) and a C-terminal domain related to their large regulatory subunit PriL. This unique domain configuration is not found in other virus-and plasmid-encoded primases in which PriS-like domains are typically fused to different types of helicases. PolpTN2 exhibited primase, polymerase and nucleotidyl transferase activities and specifically incorporates dNTPs, to the exclusion of rNTPs. PolpTN2 could efficiently prime DNA synthesis by the T. nautilus PolB DNA polymerase, suggesting that it is used in vivo as a primase for pTN2 plasmid replication. The N-terminal PriS-like domain of PolpTN2 exhibited all activities of the full-length enzyme but was much less efficient in priming cellular DNA polymerases. Surprisingly, the N-terminal domain possesses reverse transcriptase activity. We speculate that this activity could reflect an ancestral function of AEP proteins in the transition from the RNA to the DNA world.
ISSN: 0305-1048

Droits : http://creativecommons.org/licenses/by/
hal-01332620
http://hal.upmc.fr/hal-01332620
http://hal.upmc.fr/hal-01332620/document
http://hal.upmc.fr/hal-01332620/file/Nucl.%20Acids%20Res.-2014-Gill-3707-19.pdf
DOI : 10.1093/nar/gkt1385

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : International audience
Acquiring information is indisputably energy-consuming and conversely, the availability of information permits greater efficiency. Strangely, the scientific community long remained reluctant to establish a physical equivalence between the abstract notion of information and sensible thermodynamics. However, certain physicists such as Szilard and Brillouin proposed: (i) to give to information the status of a genuine thermodynamic entity (k B T ln2 joules/bit) and (ii) to link the capacity of storing information inferred from correlated systems, to that of indefinitely increasing organization. This positive feedback coupled to the self-templating molecular potential could provide a universal basis for the spontaneous rise of highly organized structures, typified by the emergence of life from a prebiotic chemical soup. Once established, this mechanism ensures the longevity and robustness of life envisioned as a general system, by allowing it to accumulate and optimize microstate-reducing recipes, thereby giving rise to strong nonlinearity, decisional capacity and multistability. Mechanisms possibly involved in priming this cycle are proposed.
ISSN: 0169-6149

inserm-00826658
http://www.hal.inserm.fr/inserm-00826658
http://www.hal.inserm.fr/inserm-00826658/document
http://www.hal.inserm.fr/inserm-00826658/file/OLEB-2013.pdf
DOI : 10.1007/s11084-013-9329-2

Éditeur(s) : Université des Antilles Études caribéennes
Résumé : Le marché de services écotouristiques se dévoile aujourd'hui comme un des principaux défis de gestion dans certains territoires protégés. Le parc amazonien Amacayacu, en Amazonie colombienne, appartient à l’un de ces territoires où le besoin d’amélioration des infrastructures de gestion et des services écotouristiques devient indispensable pour garantir la continuité de ce territoire protégé et la survie économique des groupes humains locaux. Pour cela, depuis 2005, le dispositif mis en place par le gouvernement colombien a consisté à donner en concession la gestion des services écotouristiques de ce parc au secteur privé. En premier lieu, cette recherche cherche à identifier, à tous les niveaux scalaires (local, régional, national), les étapes et les dispositifs mis en place dans ce processus de concession. En second lieu, il s’agira de mettre en évidence les impacts de ce nouveau modèle de cogestion territoriale sur les patrimoines naturels et culturels ainsi que sur les populations amérindiennes qui habitent le territoire. Enfin, nous questionnerons l’efficacité du dispositif de concession du parc Amacayacu et de ses zones de confluence, en nous attachant plus particulièrement à l’étude de la communauté Ticuna de Mocagua.
The market of ecotourism services comes to light as one of the main challenges of management in certain protected territories today. The Amazonian park Amacayacu, in Colombian Amazonia, belongs to one of these territories where the need of improvement of the infrastructures of management and the ecotourism services becomes indispensable to guarantee the continuity of management of this protected territory and the economic survival of the local human groups. For that purpose, since 2005, the device set up by the Colombian government consisted in giving in concession the management of the ecotourism services of this park to the private sector. First of all, this research tries to identify, at every level (local, regional, national), the stages and the devices set up in this process of concession. Secondly, it will be a question of bringing to light the impacts of this new model of territorial joint management on the natural and cultural heritages as well as on the Amerindian populations which live in the territory. Finally, we shall question the efficiency of the device of concession of the management of the park Amacayacu and its zones of confluence, by attaching us more particularly to the study of the community Ticuna de Mocagua.
Colombie

Droits : info:eu-repo/semantics/openAccess
urn:doi:10.4000/etudescaribeennes.5414
http://journals.openedition.org/etudescaribeennes/5414

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Cyanobacteria and their toxins are known as a health hazard in recreative and distributed waters. Monitoring data from 2004 to 2011 were collected at regional scale to characterize exposition parameters to microcystins in Brittany (Western France). The data show that cyanobacteria populations are experiencing a composition shift leading to a longer duration of cell densities higher than WHO alert levels 2 and 3. Microcystins however appear to be more frequently detected with subacute concentrations in low cell density samples than in high cell density samples or during bloom episodes. Positive relations are described between microcystin concentrations, detection frequencies and cyanobacteria biovolumes, allowing for a novel definition of alert levels and decision framework following WHO recommendations
ISSN: 1438-4639

hal-01255825
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01255825
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01255825/document
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01255825/file/Improving%20microcystin%20monitoring%20relevance%20in%20recreative%20waters%20A%20regional%20case-study%20%28Brittany%2C%20Western%20France%2C%20Europe%29.pdf
DOI : 10.1016/j.ijheh.2015.12.004

Éditeur(s) : HAL CCSD
Résumé : International audience
Alkaloids extract of Aspidosperma album was tested as corrosion inhibitor for C38 steel in 1 M HCl by using polarization and electrochemical impedance spectroscopy (EIS). Potentiodynamic polarization curves indicated that the plant extract behaves as mixed-type inhibitors. Impedance measurements showed that the double-layer capacitance decreased and charge-transfer resistance increased with increase in the inhibitors concentration and hence increasing in inhibition efficiency. The effect of temperature on the corrosion behavior of C38 steel in 1 M HCl with and without addition of plant extract was studied in the temperature range 25 – 55 °C. The adsorption of the inhibitor molecules was in accordance with the Langmuir adsorption isotherm. The results obtained show that this plant extract could serve as an effective inhibitor for the corrosion of C38 steel in hydrochloric acid.
International journal of electrochemical science

hal-01097107
https://hal-agroparistech.archives-ouvertes.fr/hal-01097107

Éditeur(s) : HAL CCSD Public Library of Science
Résumé : International audience
Pre-association of CD95 at the plasma membrane is mandatory for efficient death receptor signaling. This homotrimerization occurs through self-association of an extracellular domain called the pre-ligand assembly domain (PLAD). Using novel molecular and cellular tools, we confirmed that CD95-PLAD is necessary to promote CD95 multimerization and plays a pivotal role in the transmission of apoptotic signals. However, while a human CD95 mutant deleted of the previously described PLAD domain (amino acids 1 to 66) fails to interact with its wild-type counterpart and trigger autonomous cell death, deletion of amino acids 1 to 42 does not prevent homo- or hetero (human/mouse)-oligomerization of CD95, and thus does not alter transmission of the apoptotic signal. Overall, these findings indicate that the region between amino acids 43 to 66 corresponds to the minimal motif involved in CD95 homotypic interaction and is necessary to convey an efficient apoptotic signal. Interfering with this PLAD may represent a new therapeutic strategy for altering CD95-induced apoptotic and non-apoptotic signals.
ISSN: 1932-6203

hal-00873708
https://hal.archives-ouvertes.fr/hal-00873708
https://hal.archives-ouvertes.fr/hal-00873708/document
https://hal.archives-ouvertes.fr/hal-00873708/file/Precise_Mappingsur the_CD95-accepted.pdf
DOI : 10.1371/journal.pone.0046236

Résumé : La tuberculose, maladie très ancienne, est plus que jamais présentée sur la scène sanitaire mondiale avec 9 millions de nouveaux cas par an. Cette maladie, qui demeure une cause majeure de mortalité, est un des problèmes les plus difficiles à résoudre en santé publique et à échelle internationale. Les diverses programmes de lutte, lancés par l’Organisation Mondiale de la Santé (OMS), pour prévenir et garantir la guérison des patients tuberculeux, se heurtent à des difficultés qui hypothèquent leur efficacité. En effet, l'expansion du virus de rinimunodéficience humaine (VIII) et son influence néfaste sur la susceptibilité à la tuberculose, l'accroissement rapide de la tuberculose multirésistante, la pauvreté ainsi que la croissance démographique, sont un ensemble de facteurs préjudiciables à l'application des mesures préventives et curatives. Les contextes économiques difficiles conduisant indubitablement au cumul de ces facteurs, ont fait une césure entre les pays riches et les pays pauvres quant à l'incidence et la révolution de la tuberculose à échelle mondiale. Pour atténuer la disparité des résultats des luttes antituberculeuses, les méthodologies employées en épidémiologie de la tuberculose doivent s'inscrire dans une démarche d'efficacité. Les marqueurs moléculaires, indispensables à l'identification et à la classification des souches appartenant au complexe Mycobacterium tuberculosis (MTC) ont chacun des potentialités qui leur sont propres dont il convient de cerner pour une utilisation adéquate dans les études épidémiologiques et phylogénétiques. Le but de cette thèse consiste à extraire des connaissances nouvelles des résultats de génotypage stockées dans les bases de données, connaissances relatives au polymorphisme du support génomique pour estimer la contribution de chaque marqueur dans la classification de MTC. Le recours à différentes méthodes de reconstruction phylogénétique et de modélisation des données fut indispensable. A la lumière des résultats obtenus, cette thèse propose une nouvelle méthodologie de classification, pour rétablissement d'une phylogéographie robuste de MTC en relation avec l'histoire des migrations humaines qui aurait débutée en Afrique subsaharienne. Chaque méthode de génotypage ayant une efficience et un cout propres, qu'il convient de mesurer par rapport aux moyens disponibles et aux résultats escomptes, il est donc intéressant de renforcer la connaissance des marqueurs et de proposer différentes alternatives menant à la classification des mycobactéries. Ainsi, les résultats obtenus dans cette thèse apportent plus de cohérence aux solutions proposées pour la caractérisation des clones de MTC circulant dans le monde.
Tuberculosis, very old disease, is more than ever presented on the global health scene with 9 million new cases per year. This disease, which remains a major cause of mortality is one of the most intractable public health and international issues. The various control programs, launched by the World Health Organization (WHO) to prevent and guarantee the cure of tuberculosis patients face difficulties that undermine their effectiveness. Indeed, the expansion of human virus rinimunodéficience (VIII) and its negative influence on susceptibility to tuberculosis, the rapid growth of multidrug-resistant tuberculosis, poverty and population growth, are a set of factors detrimental to application of preventive and curative measures. The difficult economic circumstances undoubtedly leading to accumulation of these factors have a break between rich and poor countries about the impact and the revolution of tuberculosis worldwide. To address the disparity of the results of tuberculosis struggles, the methodologies used in epidemiology of tuberculosis must be part of a process efficiency. Molecular indispensable to the identification and classification of strains belonging to the Mycobacterium tuberculosis complex (MTC) markers each have their own potentials that need to be identified for proper use in epidemiological and phylogenetic studies. The purpose of this thesis is to extract new knowledge of the results of genotyping data stored in databases, knowledge of the polymorphism of genomic carrier to estimate the contribution of each marker in the classification of TCM. The use of different methods of phylogenetic reconstruction and modeling data was essential. In light of the results obtained, the thesis proposes a new classification methodology for a robust recovery phylogeography of TCM in connection with the history of human migration have started in sub-Saharan Africa. Each genotyping method with cost efficiency and equity, should be measured in relation to the resources available and discounts results, it is interesting to strengthen the knowledge of markers and propose alternatives leading to the classification of mycobacteria. Thus, the results obtained in this thesis bring more coherence to the proposed characterization of clones MTC circulating worldwide solutions.

http://www.theses.fr/2012AGUY0518/document

Éditeur(s) : HAL CCSD
Résumé : International audience
The aim of this study is to suggest two automated techniques able to help medical staff to detect earlier than usual some diseases using wireless sensor networks (WSNs). In this context, a patient is equipped with physical sensors (for temperature, pressure, ..). This WSN will perform some computations and will run an alarm when a disease is suspected. The first technique uses a population protocol to handle data exchanged between motes and provides an efficient algorithm to suggest that a disease is diagnosed on a patient. The algorithm is distributed, i.e., the decision may be done by any mote dealing with the disease detection. The second technique uses a token algorithm where, some motes, denoted as masters. Each of them is in charge of deciding if a specific disease occurs. This technique is not totally distributed but enhances the network efficiency regarding to the energy consumption, the time execution and the number of exchanged messages.
Proceedings of The Ninth IEEE International Symposium on Networking Computing and Applications
Cambridge, MA, United States

hal-00519599
https://hal.archives-ouvertes.fr/hal-00519599

Éditeur(s) : HAL CCSD Springer Verlag/EDP Sciences
Résumé : International audience
Key message: Genetic diversity appears to be unaffected by disturbance in a stand of the light-demanding Neotropical treeV. michelii. Although spatial genetic structure is modified in post-disturbance cohorts, mixing of seeds from different mother trees in canopy gaps appears to efficiently maintain genetic admixture. Context: The interplay between genetic and demographic processes has major consequences on population viability. Population size affects demographic trends, while genetic diversity insures viability by reducing risks of inbreeding depression and by maintaining adaptive potential. Yet, the consequences of increases in census size (as opposed to effective size) on genetic diversity of forest populations are poorly known. Aims: We have studied the structure of genetic diversity in populations of saplings of the light-responsive tree, Virola michelii (Myristicaceae, the nutmeg family), in two plots having undergone different levels of canopy-gap opening disturbance. This allowed us to test the “intermediate disturbance” hypothesis, which generally applies to species diversity, at the intra-specific scale. Methods: Levels and distribution of genetic diversity were compared between plots and between life stages. Sapling parentage was analysed to infer each adult tree’s contribution to regeneration. Results: Genetic diversity was higher, and spatial genetic structure was stronger in the post-disturbance than in the control seedling population. Parentage analysis suggested that a limited number of parents contributed to most of the regeneration, but that efficient mixing of their progeny may have enhanced the diversity of saplings occupying canopy gaps. Conclusion: A mixture of demo-genetic processes may contribute to maintain genetic diversity in spite of, or possibly due to, ecosystem disturbance in V. michelii.
ISSN: 1286-4560

hal-01502942
https://hal-agroparistech.archives-ouvertes.fr/hal-01502942
https://hal-agroparistech.archives-ouvertes.fr/hal-01502942/document
https://hal-agroparistech.archives-ouvertes.fr/hal-01502942/file/art_10.1007_s13595-015-0508-3-1_%7B869D58F4-272C-491F-A903-DAD6CDBDC042%7D.pdf
DOI : 10.1007/s13595-015-0508-3

Éditeur(s) : Université des Antilles Études caribéennes
Résumé : Le pouvoir d’attraction des îles n’est plus à démontrer, entre la puissance des ressources intangibles nourries par des représentations construites au fil du temps et les ressources naturelles et culturelles spécifiques de ces territoires de confins. Le tourisme apparait alors comme une opportunité indéniable. Néanmoins le contexte territorial singulier qui fait l’île doit être pris en considération pour bien mesurer les enjeux du développement touristique et l’ouverture sur le monde. Dans ce contexte, il convient de se doter d’indicateurs efficients pour mesurer la soutenabilité du projet touristique sans oublier que le développement du secteur touristique n’est qu’une étape (et non une fin en soi) dans le processus d’ouverture de l’île.
The power of attraction of the islands is well established, between the power of intangible resources fed by representations built over time and specific natural and cultural resources of these territories borders. Tourism then appears as an undeniable opportunity. However, the singular territorial context that the island must be considered to weigh the issues of tourism development and opening to the world. In this context it is necessary to develop efficient indicators to measure the sustainability of the tourism project as well as the development of the tourism sector which is only one step (and not an end in itself) in the opening process the island.

Droits : info:eu-repo/semantics/openAccess
http://journals.openedition.org/etudescaribeennes/6363

Éditeur(s) : HAL CCSD IGI Global
Résumé : International audience
Standard data mining techniques have been applied and adapted for eliciting knowledge from social networks, by achieving classical tasks such as classification, search for frequent patterns or link prediction. Most works have exploited only the network topological structure, and therefore cannot be used to answer questions involving nodes features. For instance, the frequent pattern discovery task generally refers to the search for sub-networks frequently found in a single network or in a set of networks. In the same area, this paper focuses on the concept of frequent link that stands as a regularity found in a network on links between node groups that share common characteristics. The extraction of such links from a social network is a particularly challenging and computationally intensive problem, since it is much dependent on the number of links and attributes. In this study, we propose a solution for reducing the search space of frequent links, by filtering the nodes features on a criterion of frequency. We make the assumption that frequent links occur between sets of features that are themselves frequent. This property is used to reduce the search space and speed up the extraction process. We empirically show that it is well founded. We discuss the efficiency of the solution in terms of computation time and number of frequent patterns found depending on several frequency thresholds.
ISSN: 1947-8186

hal-00786166
https://hal.archives-ouvertes.fr/hal-00786166

Résumé : The full exploitation of the world fishery resources has drastically modified the prospects and conditions for progress in fisheries. It was detenninant in the change of the Ocean Regime. Moreover, it widened considerably the range of issues which have to be addressed for an efficient use of marine living resources. Assessment approaches for complex fisheries, carrying capacity of basins and management of bivalve mollusc stocks, natural variability of fish stocks and management implications, methods for access regulation, economic rent, resources and use rights allocation, nature of aitisanal fisheries, strategies for fishery development in Third World countries, international dimensions of fisheries, etc. are among the issues reviewed in this book by scientists of international repute.
La pleine exploitation des ressources halieutiques mondiales a profondément modifié les perspectives et les conditions de progrès de la pêche. Elle a pesé lourd dans l'acccptalion du nouveau régime des océans. Surtout, elle a considérablement élargi le champ des questions à aborder pour mieux valoriser les ressources vivantes de l'océan. Méthodes d'évaluation de pêcheries complexes, capacité biotique des bassins et aménagement des cheptels coquilliers, variabilité naturelle des stocks et conséquences pour l'aménagement des pêches, méthodes de régulation de l'accès, rente économique, allocation de ressources communes et de droits d'usage, spécificité des pêches artisanales, stratégies de développement de la pêche dans les pays du Tiers Monde, dimensions internationales de la pêche, etc. figurent parmi les thèmes qu'abordent dans cet ouvrage des spécialistes de notoriété mondiale.

Droits : Institut français de recherche pour l'exploitation de la mer, IFREMER, 1989
http://archimer.ifremer.fr/doc/1989/rapport-1511.pdf
http://archimer.ifremer.fr/doc/00000/1511/

Éditeur(s) : HAL CCSD Public Library of Science
Résumé : International audience
The development of inflammatory granulomas around infected Kupffer cells is necessary for hepatic parasite clearance during visceral leishmaniasis. Invariant NKT (iNKT) cells are predominant T cells in the mouse liver and can synthesize large quantities of IL-4 and IFN-γ, two cytokines involved in granuloma formation. This study analyzed the role of iNKT cells in the hepatic immune response during Leishmania donovani infection, using a murine model of wild-type (WT) and iNKT cell-deficient (Jα18⁻/⁻) C57BL/6 mice sacrificed 15, 30 or 60 days post-infection. We recorded hepatic parasite loads, cytokine expression, and analyzed granulomatous response by immunohistochemistry and hepatic immune cell infiltration by flow cytometry. Whereas WT animals rapidly controlled the infection and developed an inflammatory response associated with a massive influx of iNKT cells observed by flow cytometry, Jα18⁻/⁻ mice had significantly higher parasitic loads on all time points. This lack of control of parasite burden was associated with a delay in granuloma maturation (28.1% of large granulomas at day 60 versus 50.7% in WT). Cytokine transcriptome analysis showed that mRNA of 90/101 genes encoding chemokines, cytokines and their receptors, was underexpressed in Jα18⁻/⁻ mice. Detection of IL-4 and TNF-α by ELISA in liver extracts was also significantly lower in Jα18⁻/⁻ mice. Consistent with flow cytometry analysis, cytokinome profile in WT mice showed a bias of expression towards T cell-chemoattractant chemokines on D15, and displayed a switch towards expression of granulocytes and/or monocytes -chemoattractant chemokines on D60. In Jα18⁻/⁻ mice, the significantly lower expression of CXCL5, MIP-2 and CCL2 mRNA was correlated with a defect in myeloperoxidase positive-cell attraction observed by immunohistochemistry and with a lower granulocyte and monocyte infiltration in the liver, as shown by flow cytometry. These data indicate that iNKT cells play a role in early and sustained pro-inflammatory cytokine response warranting efficient organization of hepatic granulomas and parasite clearance.
ISSN: 1932-6203

hal-00696897
https://hal.archives-ouvertes.fr/hal-00696897
https://hal.archives-ouvertes.fr/hal-00696897/document
https://hal.archives-ouvertes.fr/hal-00696897/file/Invariant_NKT_Cells_Drive-accepted.pdf
DOI : 10.1371/journal.pone.0033413

Éditeur(s) : HAL CCSD Springer
Résumé : International audience
This paper presents a spiking neural network simulator suitablefor biologically plausible large neural networks, named DAMNEDfor “Distributed And Multi-threaded Neural Event-Driven”. The simulatoris designed to run efficiently on a variety of hardware. DAMNEDmakes use of multi-threaded programming and non-blocking communicationsin order to optimize communications and computations overlap.This paper details the even-driven architecture of the simulator. Someoriginal contributions are presented, such as the handling of a distributedvirtual clock and an efficient circular event queue taking into accountspike propagation delays. DAMNED is evaluated on a cluster of computersfor networks from 103 to 105 neurons. Simulation and networkcreation speedups are presented. Finally, scalability is discussed regardingnumber of processors, network size and activity of the simulated NN.
Engineering Applications of Neural Networks: 11th International Conference, EANN 2009
London, United Kingdom

hal-01437753
https://hal.archives-ouvertes.fr/hal-01437753
DOI : 10.1007/978-3-642-03969-0_33

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
This paper discusses and analyses the productivity of solar home systems in isolated areas in French Guiana, a region characterized by specific human and environmental conditions.Its aim is a better understanding of the attitudes, expectations, and relationship of the users towards the solar home system. The data collected made it possible to make suggestions for adapting the photovoltaic systems to their environment by taking into account social, cultural, and geoclimatic specificities. Analysis of on-site productivity provides valuable information on energy profiles and types of use. Field surveys made it possible to associate users’ perception of the energy production equipment and their degree of satisfaction with operating efficiency and on-site maintenance. This aspect is essential for analyzing the actual rate of use of the energy that is theoretically available.Parallel to these surveys, the results of the study carried out on the performance of the solar home systems made it possible to learn the quantitative aspects of the energy produced and consumed as well as the qualitative aspects of the parameters that condition the performance of the photovoltaic systems.After keyboarding, the subjective, qualitative as well as the quantitative variables were processed using a statistical analysis program in order to determine the correlations between them and to prepare the final conclusions.
ISSN: 1364-0321

hal-01304585
https://hal.archives-ouvertes.fr/hal-01304585
https://hal.archives-ouvertes.fr/hal-01304585/document
https://hal.archives-ouvertes.fr/hal-01304585/file/article%20RSER%20Hal.pdf
DOI : 10.1016/j.rser.2009.06.015

Éditeur(s) : HAL CCSD Institute for Scientific Computing and Information
Résumé : International audience
In this paper, we solve a problem describing the mechanical deformations of a porous medium in the presence of a monophasic linear flow or a two phase nonlinear flow with the purpose of modelizing subsidence of hydrocarbon reservoirs. An essential characteristics of this problem is that the mechanical deformation and the flow have different time scales. In petroleum industry, one uses different very efficient simulators for the flow problem and the mechanical deformations, which enables to handle complex models. Therefore it is necessary to be able to combine as efficiently as possible the exploitation of these simulators. We propose two alternative splitting approaches. The first one is the staggered algorithm used by engineers, which amounts to a Gauss-Seidel method in the one phase linear case. The second approach is based upon the preconditioned conjugate gradient method. We use a numerical multi-scale method in both of these algorithms. We compare these two approaches and we show that the preconditioned conjugate gradient algorithm is faster and more robust than the staggered algorithm. Applying the preconditioned conjugate gradient algorithm therefore seems to compensate for the fact that the inf-sup condition for the mixed discretization method is not satisfied when combining the simulators for the mechanical deformations and for the flow computations.
ISSN: 1705-5105

Droits : http://creativecommons.org/licenses/by/
hal-01449039
https://hal.archives-ouvertes.fr/hal-01449039
https://hal.archives-ouvertes.fr/hal-01449039/document
https://hal.archives-ouvertes.fr/hal-01449039/file/DHLE.pdf

Éditeur(s) : HAL CCSD
Résumé : International audience
OBJECTIVES: Semen composition is influenced by HIV-1 infection, yet the impact of semen components on HIV infection of primary target cells has only been studied in samples from HIV-uninfected donors. DESIGN: We compared the effect of seminal plasma from chronically HIV-infected (SP+) versus uninfected donors (SP-) on HIV-1 infection of PBMCs and CD4+T cells. METHODS: Primary cells were infected with HIV-1 in the presence of SP+ or SP- and analyzed for infection level, metabolic activity, HIV receptor expression, proliferation and activation. SP+ and SP- were compared for infection-enhancing peptides, cytokines and prostaglandin E2 levels. RESULTS: SP- efficiently enhanced HIV-1 R5 infection of CD4+ T cells, whereas SP+ enhancing activity was significantly reduced. RANTES concentrations were elevated in SP+ relative to SP-, while the concentrations of infectivity-enhancing peptides (SEVI, SEM1, SEM2) were similar. CCR5 membrane expression levels were reduced on CD4+T cells shortly post-exposure to SP+ compared with SP- and correlated to R5-tropic HIV-1 infection levels, and CCR5 ligands' concentrations in semen. SP+ and SP- displayed similar enhancing activity on PBMC infection by X4-tropic HIV-1. Addition/depletion of RANTES from seminal plasmas modulated their effect on PBMC infection by R5-tropic HIV-1. CONCLUSIONS: Semen from HIV-infected donors exhibit a significantly reduced enhancing potential on CD4+ T cell infection by R5-tropic HIV-1 when compared with semen from uninfected donors. Our data indicate that elevated seminal concentrations of RANTES in HIV+ men can influence the ability of semen to enhance infection.This is an open-access article distributed under the terms of the Creative Commons Attribution-Non Commercial-No Derivatives 4.0 License, where it is permissible to download and share the work provided it is properly cited. The work cannot be changed in any way or used commercially. http://creativecommons.org/licenses/by-nc-nd/4.0
AIDS

hal-01274885
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01274885
DOI : 10.1097/QAD.0000000000001048
PUBMED : 26854806

Éditeur(s) : HAL CCSD
Résumé : International audience
The main biological function of reaction wood is to act as “muscle” for trees, enabling them to control their posture and right stems when they are permanently disturbed from their set-point inclination by gravity or winds. The key property to achieve this function is the development of high mechanical stress during the formation of reaction wood cells, called “maturation strains”. Moreover, this function is basically performed through the asymmetric formation of wood (in quantity or quality) around the tree circumference. This asymmetry enables stems to bend upward or to compensate for the downward bending induced by gravity, as an asymmetric force associated to maturation strains creates a bending moment (i.e. one side of the stem “pulls” the other one). We will discuss the traits (cross sectional size and shape, wood features as G fibers or microfibril angle, eccentric growth even in usual or extreme cases as buttresses, total biomass growth and height of center of mass, stem lean and set-point angle) involved to understand how the posture control works. We will give simple formulas to estimate a “muscle efficiency” from biomechanical modeling. We will give practical methods to estimate all the involved traits, especially maturation strains from direct and indirect measurements, in peripheral functional wood or by retrospective dendrochronological analysis. Then, we will illustrate how tree stem tropisms and especially gravitropism, widely studied by physiologists, are key processes in natural ecosystems, through practical examples from tropical rainforest tree communities and regeneration of European mixed beech forests. Using the previous definition of postural control efficiency, we will show that the cross section size is rapidly a limiting factor, opposing the extreme strategies of flexible small stems, which bend easily but also right themselves quickly, to stiff big stems. Lastly, as wood in living trees ensures general storage, defence, vascular and skeletal functions, we will ask general questions about synergies and trade-offs between posture control and other functions.
Botany 2014 : new frontiers in botany
Boise, United States

hal-01627031
https://hal.archives-ouvertes.fr/hal-01627031

Éditeur(s) : HAL CCSD
Résumé : International audience
Corrosion inhibition effect of alkaloids extract from Palicourea guianensis plant (AEPG) on C38 steel in 1 M HCl medium has been investigated by potentiodynamic polarization and electrochemical impedance spectroscopy. The polarization studies showed that AEPG acts as mixed-type inhibitor. The electrochemical impedance spectroscopy showed that the charge transfer resistance increases and the double layer capacitance decreases on increasing plant extract concentration. The inhibition efficiency of the extract obtained from impedance and polarization measurements was in a good agreement and was found to increase with increasing concentration of the extract. Inhibition efficiency of 89% was achieved with 100 mg L-1 of AEPG at 25 °C. The obtained results showed that, the Palicourea guianensis extract could serve as an effective inhibitor for the corrosion of steel in acid media. The adsorption of AEPG obeys the Langmuir adsorption isotherm.
International journal of electrochemical science

hal-01096655
https://hal-agroparistech.archives-ouvertes.fr/hal-01096655