Éditeur(s) : HAL CCSD Cushman Foundation for Foraminiferal Research
Résumé : International audience
This study proposes a new method for fast and inexpensive extraction of a large number of living foraminifera for laboratory cultures. The method is a significant improvement over current extraction methods, which are highly time-consuming. Several treatments were designed to test the method. Sediment bearing foraminifera from Brouage Mudflat (Atlantic coast of France) was washed through a 50-µm sieve and distributed in glass Petri dishes with 20, 40 and 80 specimens of Hydrobia ulvae, a common gastropod from European intertidal mudflats. As a control experiment, one dish was treated similarly but maintained without Hydrobia. After two days, most of the sediment in the Hydrobia treatments was compacted into small cylindrical gastropod feces and the tests of living benthic foraminifera (Ammonia tepida and Haynesina germanica) were clean and easily visible. Additional experiments showed that the foraminifera were not ingested by Hydrobia ulvae, and could be picked quickly and easily.
ISSN: 0096-1191

hal-01248034
https://hal.archives-ouvertes.fr/hal-01248034
https://hal.archives-ouvertes.fr/hal-01248034/document
https://hal.archives-ouvertes.fr/hal-01248034/file/rossignol%20et%20al%202007.pdf
DOI : 10.2113/gsjfr.37.1.8

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
To quantify the relationships between anisotropy. S-wave splitting and tectonics, we determined the seismic properties of lower-crustal and upper-mantle rocks outcropping in the lvrea Zone (Northem Italy). We obtained P-and S-wave seismic velocities by laboratory direct velocity measurements and/or by calculations based on the modal compositions of the rocks, the lattice preferred orientations (LPOs), and the single crystal stiffness coefficients. Measured P-and S-wave velocities (6.0-7 .5 km s-1 and 3.6-4.2 km s-1) are typical of the lower crust. The P-wave anisotropy is in the range 0-l 0%. Shear-wave birefringence is in the range 0.0-0.6 km s-1 , with typical values between 0.0 and 0.2 km s-1 • In many cases, the birefringence is clearly related to fabric elements (foliation, lineation). Mafic rocks such as anorthosite or pyroxene-bearing gabbros exhibit low P-wave anisotropies (< 5%) and low shear-wave birefringences (less than 0.1 km s-1). In contrast, the seismic properties of felsic rocks such as biotite-bearing gneisses and mafic rocks such as amphibolites display high V P anisotropy (10%) and strong birefringence (0.3 km s-1). Biotite and amphibole preferred orientations clearly control seismic anisotropy and particularly shear-wave splitting. In these rocks, maximum splitting is observed in directions parallel to the foliation with the fast split shear wave polarized parallel to the foliation plane. To have an overview of the seismic properties of this lower-crustal section at a broader scale, we calculated from our data the anisotropie seismic properties of several hypothetical samples that are perhaps more representative of the regional anisotropy than each sample individually. For instance, the average lower-crustal sample displays an anisotropy of 5.5% for P waves and a birefringence around 0.14 km s I for S waves propagating parallel to the foliation. We observe little splitting for waves propagating at high angle to the foliation.
ISSN: 0031-9201

hal-01389712
http://hal.univ-reunion.fr/hal-01389712
http://hal.univ-reunion.fr/hal-01389712/document
http://hal.univ-reunion.fr/hal-01389712/file/Barruol_Kern-PEPI96_hal.pdf
DOI : 10.1016/0031-9201(95)03124-3

Éditeur(s) : HAL CCSD
Résumé : The Earth's magnetic field shows a large range of temporal variations from the year to several million years. I studied during my PhD thesis several aspects of these fluctuations, from recent secular variations to reversals. The first part of my manuscript deals with archeomagnetism, a discipline that allows to track the temporal variations of the Earth's magnetic field through millennia, mainly from archeological materials. I studied two sets of samples , one from Greece (Neolithic period 6800-3200 B.C.) and the other from Mexico (Palenque, Maya Classic period 320-840 A.D.), to acquire new archeointensity data in order to better constrain the secular variation of the geomagnetic field. By comparing my data with those available in the literature and with the various global and regional models, I showed that the secular variations during the Neolithic in Greece and during the first millennium in Central America are poorly defined. My data suggest that local components, not described by global models, may exist in these regions. They reinforce the importance of developing specific regional models. As a consequence, the acquisition of new high quality data is of main importance. The second part presents the description of a geomagnetic field reversal. This work was based on two points : first by studying transitional directions to provide new constraints on the possible preferred longitudinal paths of virtual geomagnetic poles (VGPs) and second by checking transitional paleointensities obtained on a volcanic sequence in Akaroa volcano (New Zealand). Indeed the transitional field intensity is significantly higher than the field intensity before and after the reversal. We re-sampled this sequence, and the directional results show a complex sequence of N-T-R-T-N-T-R polarity. The transitional VGPs obtained are clustered in two longitudinal bands through Australia and America. This observation seems to reinforce the assumption of a core-mantle interaction over several million years. Following a rock magnetic study, I selected samples that could provide a value for the Thellier and multispecimen paleointensity methods. The obtained paleointensity are relatively low (about 20 μT) during the polarity change and strong at the end of the sequence. Based both on the field strength values and on the radiochronological ages, showing that the sequence was erupted in a very short time, I suggest that only the C4AR.1n-C4Ar.1r reversal was recorded in this sequence. In this assumption, the reversal shows a complex path comparable to other reversals recorded in the northern hemisphere (for example the Steens Mountain ), including a rebound before stabilizing. Finally the last part is devoted to the development of a new methodology and a new apparatus to determine absolute paleointensity. Following the low success rate of paleointensity experiments from the previous study, I decided to test the multispecimen protocol, which can be applied to samples yielding a predominant multidomaine behavior. The main technical drawback of this method lies in the application of the laboratory field along the natural remanent magnetization, a difficult task to perform accurately in standard paleointensity ovens. Thus, we decided to adapt sample holders from our standard oven in order to allow the sample orientation in space and to develop an ultra-fast heating oven prototype particularly well-suited for this method, allowing to apply the laboratory field in the 3 dimensions. I checked the different multispecimen protocols on historical lavas from Reunion and Etna volcano, yielding very different magnetic mineralogies. For all flows, I obtained paleointensities very close from the expected values, regardless from the magnetic mineralogy, revealing the feasibility of our apparatus and the promising interest of the method. The application of various corrections on the statistical estimation of the intensity value or on the cooling rate had no significant impact on my results.
La première partie de ma thèse porte sur l'archéomagnétisme, discipline qui permet de retracer l'évolution temporelle du champ magnétique terrestre au travers des derniers millénaires, principalement à partir des matériaux archéologiques. J'ai étudié deux jeux d'échantillons provenant pour l'un de la Grèce (période néolithique, 6800-3200 avant J.C.) et pour l'autre du Mexique (Palenque, période Maya Classique 320-840 après J.C.), dans le but d'acquérir de nouvelles données d'archéointensité et de mieux contraindre la variation séculaire du champ magnétique terrestre. La comparaison de mes données avec celles disponibles dans la bibliographie et avec les différents modèles globaux et régionaux a mis en évidence que les variations séculaires au Néolithique en Grèce et au cours du premier millénaire en Amérique Centrale sont très mal définies. Mes données suggèrent que des composantes locales, non prisent en compte dans les modèles globaux peuvent exister au niveau de ces régions. Elles renforcent l'intérêt de développer des modèles régionaux précis. Pour ce faire, l'acquisition de nouvelles données de haute qualitéest un élément majeur. La deuxième partie traite de la description d'un renversement du champ magnétique terrestre. Cette étude a été basée sur deux points précis : étudier les directions transitionnelles afin d'apporter de nouvelles contraintes sur le possible confinement longitudinal des pôles géomagnétiques virtuels (PGV) d'une part, et d'autre part vérifier des paléointensités transitionnelles obtenues sur la séquence volcanique d'Akaroa (Nouvelle Zélande), dont l'intensité est significativement supérieure à celles des intensités avant et après le renversement. Nous avons ré-échantillonné cette séquence, et l'évolution directionnelle obtenue pour ce renversement est une succession complexe de polarités N-T-R-T-N-T-R. Les PGV obtenus semblent se regrouper sous deux bandes longitudinales sous l'Australie et l'Amérique, ce qui renforce l'hypothèse d'une interaction entre le manteau et le noyau sur plusieurs millions d'années. Suite à une étude de minéralogie magnétique, j'ai sélectionné les échantillons susceptibles de fournir une valeur de paléointensité par les méthodes de Thellier et du multispecimen. Les paléointensités obtenues sont relativement faibles (environ 20 μT) au cours du changement de polarité et forte à la fin de la séquence. Mon interprétation, basée à la fois sur les valeurs de l'intensité du champ et sur les données radiochronologiques montrant que la séquence s'est mise en place très rapidement, est de considérer que seul le renversement C4Ar.1n-C4Ar.1r a été enregistré dans cette séquence. Dans cette hypothèse, le renversement montre un cheminement complexe comparable à d'autres renversements enregistrés dans l'hémisphère nord (comme celui de la Steens Mountain par exemple), incluant un phénomène de rebond avant de se stabiliser. La troisième partie de ma thèse est consacrée au développement d'une nouvelle méthodologie et d'un nouvel appareillage pour déterminer des paléointensités. Le faible taux de réussite des expériences de paléointensité de l'étude précédente m'a poussé à m'intéresser au protocole multispecimen, qui peut s'appliquer aux échantillons possédant un comportement polydomaine. L'inconvénient technique majeur de cette méthode réside dans l'application du champ le long de l'aimantation naturelle, difficile à réaliser avec précision dans les fours standards. Pour ce faire, nous avons décidé de développer des porte-échantillons permettant d'orienter les échantillons dans l'espace pour le four standard et un prototype de four à chauffage ultra-rapide particulièrement bien adapté avec la possibilité d'orienter le champ appliqué dans les 3 dimensions. J'ai testé les différents protocoles de la méthode sur des laves historiques de la Réunion et de l'Etna, possédant des minéralogies très différentes. Pour l'ensemble des coulées étudiées, j'ai obtenu des paléointensités très proches des valeurs attendues, et ce indépendamment de la minéralogie, révélant ainsi le faisabilité de notre appareillage et le côté prometteur de la méthode. L'application de diverses corrections sur la statistique d'estimation de la valeur de l'intensité ou sur le taux de refroidissement n'ont eu aucun impact notable sur mes résultats.
https://tel.archives-ouvertes.fr/tel-00719380

tel-00719380
https://tel.archives-ouvertes.fr/tel-00719380
https://tel.archives-ouvertes.fr/tel-00719380/document
https://tel.archives-ouvertes.fr/tel-00719380/file/thesefanjat2012.pdf

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Alkali feldspar thermochronologic modeling with the 40Ar/39Ar method has generated marked advances in knowledge of the mechanisms for argon diffusion in feldspars. While the goal in many cases has been to extrapolate the observed and modeled argon behavior in feldspars to natural geological settings, scientific debate surrounding the true feasibility of such extrapolations and indeed, the validity of thermochronologic modeling in itself, have provided much impetus to improve laboratory techniques to test, and increase basic understanding of, argon diffusion. Two cornerstones for the debate over the feasibility of alkali feldspar thermochronology for modeling natural, geologic processes have been: 1. is volume diffusion the main mechanism for argon movement in feldspars? and 2. if volume diffusion is a viable mechanism, does argon then reside in discrete ‘domains' within the feldspar lattice? We describe a study of alkali feldspars from a profile through a well-controlled brittle fault zone in western Norway; the feldspars document argon loss during deformation and strongly suggest the existence of argon ‘domains' within the feldspars, at least during laboratory step heating. The progressive change in the character of argon diffusion is recognizable in the logr/ro diffusion data from the feldspars and is mimicked by physical changes observed optically in the feldspars through progressive degrees of brittle deformation. Modeling results indicate a reduction in size of the biggest domains and the appearance of smaller domains during the strongest stages of deformation. Whether or not this reveals the existence and the transformation of the domain structure in naturo is difficult to prove from our data alone, but interestingly, this behaviour corresponds directly to the physical (optical) appearance of more intense crack networks and subgrains in progressively more brecciated feldspars. Because the thermochronologic histories derived from modeling the feldspar data conform very well to the known tectonic history of the area, the feldspars appear to have successfully retained physical (optical and isotopic) records of episodic tectonic processes operating from ductile through lowtemperature brittle regimes in rocks with a Caledonian history overprinted by several later (younger) geologic events. However, because the ‘cold' brecciation is the last tectonothermal event recorded by these rocks, it is impossible to truly test for the existence of diffusion domains in naturo. Argon loss appears to have been effective only in the most highly brecciated (deformed) samples where the combination of the connected crack network, increased fluid flow and higher temperatures enhanced diffusion via fast diffusion pathways and thus, volume diffusion from the lattice. Only minor argon loss occurred in zones of lower brittle strain, although some development of cracks and brittle features is evident. Independent of the existence of diffusion domains, this study highlights the possible pitfalls when cooling histories are deduced from brecciated feldspars in which age and diffusion charateristics have been decoupled: while the geochronological memory has survived and is identical to that of nonbrecciated feldspars (suggesting no loss and minor effects of deformation), the diffusion characteristics have been completely transposed by brecciation and the appearance of new domains. Modeling feldspars with these latter characteristics would effectively utilise a new feldspar diffusion structure with an ‘old' (relict) age memory.
ISSN: 0016-7037

hal-00198283
https://hal.archives-ouvertes.fr/hal-00198283
https://hal.archives-ouvertes.fr/hal-00198283/document
https://hal.archives-ouvertes.fr/hal-00198283/file/KsparBreccia_Arnaud_Eide_GCA_2000.pdf

Éditeur(s) : HAL CCSD Elsevier
Résumé : DNA metabarcoding on soil samples is increasingly used for large-scale and multi-taxa biodiversity studies. However, DNA extraction may be a major bottleneck for such wide uses. It should be cost/time effective and allow dealing with large sample volumes so as to maximise the representativeness of both micro- and macro-organisms diversity. Here, we compared the performances of a fast and cheap extracellular DNA extraction protocol with a total DNA extraction method in retrieving bacterial, eukaryotic and plant diversity from tropical soil samples of ca. 10 g. The total DNA extraction protocol yielded more high-quality DNA. Yet, the extracellular DNA protocol provided similar diversity assessments although it presented some differences in clades relative abundance and undersampling biases. We argue that extracellular DNA is a good compromise between cost, labor, and accuracy for high throughput DNA metabarcoding studies of soil biodiversity.
ISSN: 0038-0717

hal-01532638
https://hal.archives-ouvertes.fr/hal-01532638
DOI : 10.1016/j.soilbio.2016.01.008
PRODINRA : 384522

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
There are emerging concerns about potential effects on child health and development of early-life exposure to substances such as brominated flame retardants (BFRs), perfluorinated compounds (PFCs), phthalates and phenols (including bisphenol A (BPA)); pregnancy and birth cohort studies are ideally designed to study such concerns prospectively. As part of the ENRIECO project, we evaluated existing human biomonitoring data for these substances in European birth cohorts and develop recommendations for more harmonized methods that will enable combination and comparison of cohort data in the future. The ENRIECO inventory shows that 20 European birth cohorts have measured or are measuring BFRs (N=10), PFCs (N=11), phthalates (N=16) or phenols (N=8). Generally, samples were collected prenatally or at birth and measurements involved few subjects in each cohort (a few hundred maximum). Biological matrices, timing, and analytical methods of the measurements varied between cohorts. Few cohorts have measured at multiple time points or in children. In European cohorts, levels of BFRs were very low and at least 10-fold lower than in US; levels of PFCs and phthalates have decreased over the last decade since the phasing out of certain of these compounds; concentrations of phenols are comparable to those in the US. Although there is little published data in the cohorts now, many measurements are ongoing and we recommend that cohorts start working towards combined and comparison studies. Specific recommendations for use of existing data include the development of conversion models for the different media used for measurement of persistent chemicals, and inter-laboratory comparisons and calibrations. Recommendations for further data collection include more evaluation of exposure to these chemicals in children; repeated measurements of non-persistent chemicals; validation and harmonisation of questionnaires; and the development of mechanisms for fast European birth cohort response for the detection and prioritisation of new chemicals of concern.
ISSN: 1438-4639

hal-01118579
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01118579
DOI : 10.1016/j.ijheh.2012.05.009
PUBMED : 22795704

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
The Oman ophiolite includes both a fossil fast spreading axis, defined by five mantle diapirs, and an off-axis mantle diapir emplaced 30 km from the axis, providing a natural laboratory for the study of off-axis magmatic processes. We compare field and petrological observations coupled with geochemical and isotopic analyses of samples from the off-axis diapir with those of the nearest on-axis diapir, with a particular focus on the Moho Transition Zone (MTZ). Both diapirs are defined by the presence of steeply plunging lineations, but in the on-axis case, these lineations rotate gradually into parallelism with the horizontal magmatic lineations of the overlying crust, while in the off-axis case, a shear zone separates the steeply plunging lineations from the horizontal lineations of the surrounding mantle. In the on-axis diapir, the MTZ is 50 to 500 m thick and composed of dunite with layered gabbro lenses whereas in the off-axis diapir, the MTZ is thicker and composed of dunite with massive (∼20% of MTZ) clinopyroxenite lenses and a notable absence of plagioclase. Moreover, the off-axis diapir is associated with amphibole-bearing intrusions, consisting of Mg-rich gabbroic sills in the mantle peripheral to the diapir, and microgabbroic lenses of broadly basaltic composition in the overlying crust. The ε Nd values of the pyroxenites in the MTZ of the off-axis diapir fully overlap with those of the intrusions in the surrounding mantle and crust, suggesting that they are genetically related. Calculated rare earth element (REE) abundances of liquids in equilibrium with clinopyroxene imply that the magmas that traversed the MTZ of the off-axis diapir were more depleted in highly incompatible elements than their counterparts in the MTZ of the on-axis diapir. On the other hand, Nd isotopic compositions of the off-axis samples (εNd=6.2–7.9εNd=6.2–7.9 in 18 of 19 samples) indicate derivation of their parental magmas from a less depleted source than that which produced the magma associated with the on-axis gabbro (εNd=7.8–9.2εNd=7.8–9.2, 10 analyses).To explain these observations, we suggest that the earliest magmas in the uprising off-axis diapir formed from the partial melting of pyroxenite veins with less radiogenic Nd isotopic compositions than those of the ambient peridotite. As the diapir traversed the cool, hydrated lithosphere these early melts interacted with depleted harzburgites, lowering the incompatible element contents of the melt products while having little effect on their Nd isotopic compositions. The great abundance of clinopyroxene in the off-axis MTZ might be explained by the high pyroxene component in the original melt but perhaps also by the presence of water in the lithosphere, which would favor the crystallization of clinopyroxene while inhibiting that of plagioclase. The intrusions in the overlying crust could represent, to first order, the secondary melts produced by the melt–harzburgite reaction, while the sills in the surrounding mantle may be cumulates from such secondary melts.These results shed light on processes occurring during interaction between rising off-axis material and depleted, hydrated lithospheric mantle. Furthermore, if our interpretation is correct, the low εNd values of the off-axis samples contribute to the growing body of evidence for the presence of pyroxenite veins in the MORB mantle source.
ISSN: 0012-821X

hal-01306575
https://hal.archives-ouvertes.fr/hal-01306575
DOI : 10.1016/j.epsl.2015.12.005