Éditeur(s) : Elsevier
Résumé : To improve the knowledge of the survival of enteric viruses in a marine environment, the influence of physico-chemical parameters (temperature, UV, salinity) on the survival of infectious poliovirus 1 and hepatitis A Virus (HAV) in seawater was first studied, the influence of suspended solids (SS) on poliovirus adsorption and survival in seawater was then evaluated and the detection of rotavirus genome in environmental samples (shellfish, river water, treated wastewater) was finally investigated. The results show that temperature has a major impact on virus survival in seawater as the time necessary to inactivate 90 % of the virus (T-90) is 671 days at 4 degrees C and only 25 days at 25 degrees C. Ultraviolet light (42 mW s cm(-2)) rapidly inactivates viruses but HAV is more resistant (T-90 = 2.6 min) than the poliovirus 1 (T-90 = 1.3 min). By contrast, seawater salinity has no effect on virus survival. In presence of SS, 90 % to 99.9 % of the viruses were adsorbed. This adsorption does not provide any protection for viruses with low SS concentrations (3 and 15 mg L-1) but a slight increase in virus survival was observed with a high SS concentration (500 mg L-1). Finally environmental sample analysis indicated that 20 % shellfish, about 40 % river water and 40 % treated wastewater tested positive for the rotavirus genome.
Ce travail a pour but de mieux comprendre le devenir des virus en milieu marin. Dans ce cadre, l'influence de certains paramètres physicochimiques (température, UV et salinité) sur le pouvoir infectieux du poliovirus 1 et du virus de l'hépatite A (VHA) en eau de mer a été évalué, puis l'adsorption du poliovirus 1 sur les matières en suspension (MES) a été étudié, ainsi que les conséquences sur le pouvoir infectieux du virus et enfin le génome des rotavirus a été recherché en milieu naturel (eaux et coquillages). Les résultats montrent que la température est un paramètre important pour la survie des virus puisque le temps nécessaire à inactiver 90 % des virus (T90) en eau de mer est de 671 j à 4 °C alors qu'il est seulement de 25 j à 25 °C. Le rayonnement ultraviolet (42 mW s cm−2) testé en pilote expérimental, permet d'obtenir une inactivation rapide du poliovirus 1 (T90 = 1,3 min). Le VHA est plus résistant avec un T90 = 2,6 min. En revanche la salinité de l'eau de mer n'a pas d'influence sur la survie des virus. En ce qui concerne l'influence des MES, les résultats montrent qu'en présence de 3, 15 et 500 mg L−1 de Na-montmorillonite la majorité des virus est adsorbée (90 à 99,9 %). Cet état adsorbé ne procure aucune protection aux virus pour les faibles concentrations de MES (3 et 15 mg L−1) alors qu'une augmentation significative de survie est observée pour les fortes concentrations (500 mg L−1). Enfin, l'analyse d'échantillon de l'environnement a montré que 20 % des fruits de mer, environ 40 % des eaux de rivière et environ 40 % des eaux usées traitées testées contenaient du génome de rotavirus.
Oceanologica Acta (0399-1784) (Elsevier), 1998-11 , Vol. 21 , N. 6 , P. 983-992

Droits : 1998 Ifremer / CNRS / IRD - Published by Elsevier SAS
http://archimer.ifremer.fr/doc/1998/publication-846.pdf
DOI:10.1016/S0399-1784(99)80020-6
http://archimer.ifremer.fr/doc/00000/846/

Éditeur(s) : Copernicus Gesellschaft Mbh
Résumé : The sea surface salinity (SSS) measured from space by the Soil Moisture and Ocean Salinity (SMOS) mission has recently been revisited by the European Space Agency first campaign reprocessing. We show that, with respect to the previous version, biases close to land and ice greatly decrease. The accuracy of SMOS SSS averaged over 10 days, 100 x 100 km(2) in the open ocean and estimated by comparison to ARGO (Array for Real-Time Geostrophic Oceanography) SSS is on the order of 0.3-0.4 in tropical and subtropical regions and 0.5 in a cold region. The averaged negative SSS bias (-0.1) observed in the tropical Pacific Ocean between 5 degrees N and 15 degrees N, relatively to other regions, is suppressed when SMOS observations concomitant with rain events, as detected from SSM/Is (Special Sensor Microwave Imager) rain rates, are removed from the SMOS-ARGO comparisons. The SMOS freshening is linearly correlated to SSM/Is rain rate with a slope estimated to -0.14 mm(-1) h, after correction for rain atmospheric contribution. This tendency is the signature of the temporal SSS variability between the time of SMOS and ARGO measurements linked to rain variability and of the vertical salinity stratification between the first centimeter of the sea surface layer sampled by SMOS and the 5 m depth sampled by ARGO. However, given that the whole set of collocations includes situations with ARGO measurements concomitant with rain events collocated with SMOS measurements under no rain, the mean -0.1 bias and the negative skewness of the statistical distribution of SMOS minus ARGO SSS difference are very likely the mean signature of the vertical salinity stratification. In the future, the analysis of ongoing in situ salinity measurements in the top 50 cm of the sea surface and of Aquarius satellite SSS are expected to provide complementary information about the sea surface salinity stratification.
Ocean Science (1812-0784) (Copernicus Gesellschaft Mbh), 2013 , Vol. 9 , N. 1 , P. 183-192

Droits : Author(s) 2013. CC Attribution 3.0 License.
http://archimer.ifremer.fr/doc/00139/25073/23161.pdf
DOI:10.5194/os-9-183-2013
http://archimer.ifremer.fr/doc/00139/25073/

Éditeur(s) : Springer
Résumé : While it is well known that the ocean is one of the most important component of the climate system, with a heat capacity 1,100 times greater than the atmosphere, the ocean is also the primary reservoir for freshwater transport to the atmosphere and largest component of the global water cycle. Two new satellite sensors, the ESA Soil Moisture and Ocean Salinity (SMOS) and the NASA Aquarius SAC-D missions, are now providing the first space-borne measurements of the sea surface salinity (SSS). In this paper, we present examples demonstrating how SMOS-derived SSS data are being used to better characterize key land–ocean and atmosphere–ocean interaction processes that occur within the marine hydrological cycle. In particular, SMOS with its ocean mapping capability provides observations across the world’s largest tropical ocean fresh pool regions, and we discuss from intraseasonal to interannual precipitation impacts as well as large-scale river runoff from the Amazon–Orinoco and Congo rivers and its offshore advection. Synergistic multi-satellite analyses of these new surface salinity data sets combined with sea surface temperature, dynamical height and currents from altimetry, surface wind, ocean color, rainfall estimates, and in situ observations are shown to yield new freshwater budget insight. Finally, SSS observations from the SMOS and Aquarius/SAC-D sensors are combined to examine the response of the upper ocean to tropical cyclone passage including the potential role that a freshwater-induced upper ocean barrier layer may play in modulating surface cooling and enthalpy flux in tropical cyclone track regions.
Surveys In Geophysics (0169-3298) (Springer), 2014-05 , Vol. 35 , N. 3 , P. 681-722

Droits : Springer Science+Business Media Dordrecht 2013
http://archimer.ifremer.fr/doc/00152/26334/24430.pdf
DOI:10.1007/s10712-013-9244-0
http://archimer.ifremer.fr/doc/00152/26334/

Éditeur(s) : HAL CCSD IOS Press
Résumé : International audience
The hematocrit-to-viscosity ratio (HVR) has been widely used has an estimate of red blood cell (RBC) oxygen transport effectiveness into the microvasculature or as an oxygen delivery index. However, no study investigated the possibility of HVR to truly reflect RBC oxygen transport effectiveness or to be an oxygen delivery index. We measured blood viscosity at high shear rate (225 s −1), hematocrit, HVR, as well as the microvascular oxyhemoglobin saturation (TOI; tissue oxygen index) by spatial resolved near-infrared spectroscopy (NIRS) at cerebral and muscle levels in three population known to have various degrees of hemorheological abnormalities: healthy subjects (AA), patients with sickle cell SC disease (SC) characterized by moderate anemia and patients with sickle cell anemia (SS) marked by severe anemia. At both the cerebral and muscle level, HVR was positively correlated with TOI (r = 0.28; p = 0.03 and r = 0.38; p = 0.003, at the cerebral and muscle level, respectively). These findings suggest that HVR probably play a key role in blood flow and hemodynamic regulation in the microvasculature, hence modulating the amount of oxygen available for tissues. Nevertheless, the strengths of the associations are weak (R 2 < 0.50), suggesting that other determinants modulate microvascular blood flow and oxygenation, such as vascular geometry and vasomotor reserve.
ISSN: 1386-0291

hal-01163460
https://hal.univ-antilles.fr/hal-01163460
DOI : 10.3233/CH-131742

Éditeur(s) : Amer Geophysical Union
Résumé : At its seasonal peak the Amazon/Orinoco plume covers a region of 10^6 km2 in the western tropical Atlantic with more than 1m of extra freshwater, creating a near-surface barrier layer (BL) that inhibits mixing and warms the sea surface temperature (SST) to >29oC. Here new sea surface salinity (SSS) observations from the Aquarius/SACD and SMOS satellites help elucidate the ocean response to hurricane Katia, which crossed the plume in early fall, 2011. Its passage left a 1.5psu high haline wake covering >10^5 km2 (in its impact on density, the equivalent of a 3.5oC cooling) due to mixing of the shallow BL. Destruction of this BL apparently decreased SST cooling in the plume, and thus preserved higher SST and evaporation than outside. Combined with SST, the new satellite SSS data provide a new and better tool to monitor the plume extent and quantify tropical cyclone upper ocean responses with important implications for forecasting.
Geophysical Research Letters (0094-8276) (Amer Geophysical Union), 2012-10 , Vol. 39 , N. L20603 , P. 1-8

Droits : 2012. American Geophysical Union. All Rights Reserved.
http://archimer.ifremer.fr/doc/00094/20540/18943.pdf
DOI:10.1029/2012GL053335
http://archimer.ifremer.fr/doc/00094/20540/

Éditeur(s) : Amer Geophysical Union
Résumé : An analysis is presented for the spatial and intensity distributions of North Atlantic extreme atmospheric events crossing the buoyant Amazon-Orinoco freshwater plume. The sea surface cooling amplitude in the wake of an ensemble of storm tracks traveling in that region is estimated from satellite products for the period 1998-2012. For the most intense storms, cooling is systematically reduced by approximate to 50% over the plume area compared to surroundings open-ocean waters. Historical salinity and temperature observations from in situ profiles indicate that salt-driven vertical stratification, enhanced oceanic heat content, and barrier-layer presence within the plume waters are likely key oceanic factors to explain these results. Satellite SMOS surface salinity data combined with in situ observations are further used to detail the oceanic response to category 4 hurricane Igor in 2010. Argo and satellite measurements confirm the haline stratification impact on the cooling inhibition as the hurricane crossed the river plume. Over this region, the SSS mapping capability is further tested and demonstrated to monitor the horizontal distribution of the vertical stratification parameter. SMOS SSS data can thus be used to consistently anticipate the cooling inhibition in the wake of TCs traveling over the Amazon-Orinoco plume region.
Journal Of Geophysical Research-oceans (0148-0027) (Amer Geophysical Union), 2014-12 , Vol. 119 , N. 12 , P. 8271-8295

Droits : 2014. American Geophysical Union. All Rights Reserved.
http://archimer.ifremer.fr/doc/00252/36326/34855.pdf
http://archimer.ifremer.fr/doc/00252/36326/34856.pdf
DOI:10.1002/2014JC010107
http://archimer.ifremer.fr/doc/00252/36326/

Éditeur(s) : HAL CCSD IOS Press
Résumé : International audience
Sickle cell anemia (SCA or SS homozygous sickle cell disease) is an inherited blood disorder caused by single 12 nucleotide substitution in the ␤-globin gene that renders their hemoglobin (HbS) much less soluble than normal hemoglobin 13 (HbA) when deoxygenated. The polymerization of HbS upon deoxygenation is the basic pathophysiologic event leading to 14 RBC sickling, hemolysis, vasoocclusion and ultimately to chronic organ damage. The metabolic changes imposed by exercise 15 may initiate sickling and vaso-occlusive episodes. Further, in patients with SCA, exercise limitation may be related to anemia 16 or chronic complications such as pulmonary vascular disease, congestive heart failure and chronic parenchymal lung disease. 17 Few studies have investigated the cardiorespiratory responses of patients with SCA during either symptom-limited maximal 18 exercise test on cyclo-ergometer or during a six minute walk test. Therefore, patients are advised to start exercise slowly and 19 progressively, to maintain adequate hydration during and after exercise, to avoid cold exposure or sudden change in temperature, 20 and to avoid sports associated with mechanical trauma. There are, however, lack of evidence to allow practitioners to prescribe 21 an exercise program for patients with SCA, and individuals are usually encouraged to exercise on a symptom-limited basis. 22 Finally, this review will also highlight the basic principles that are often used for exercise practice and could be used for exercise 23 prescription and rehabilitation in patients with sickle cell anemia.
ISSN: 1386-0291

hal-01163966
https://hal.univ-antilles.fr/hal-01163966
DOI : 10.3233/CH-2011-1465

Éditeur(s) : HAL CCSD
Résumé : International audience
Hemoglobin electrophoresis realised as a routine screening test on 1 500 gabonese individuals revealed the existence of a sickle cell abnormality n 24.40% cases (22.27% were AS heterozygotous and 2.1% were SS homozygotous). Bapounov and Fang ethnies appeared to be the most involved. The importance of such disturbance (I gabonese individual out of 4 is concerned) could justify the creation of Prenatal Counseling Centers mainly dealing with this genetic problem.
Bull Soc Pathol Exot Filiales

hal-00717071
https://hal.univ-antilles.fr/hal-00717071
PUBMED : 7460122

Éditeur(s) : HAL CCSD American Geophysical Union
Résumé : International audience
We present Contact Dynamics discrete element simulations of the earthquake-triggered Jiufengershan avalanche, which mobilized a 60 m thick, 1.5 km long sedimentary layer, dipping similar to 22 degrees SE toward a valley. The dynamic behavior of the avalanche is simulated under different assumptions about rock behavior, water table height, and boundary shear strength. Additionally, seismic shaking is introduced using strong motion records from nearby stations. We assume that seismic shaking generates shearing and frictional heating along the surface of rupture, which, in turn, may induce dynamic weakening and avalanche triggering; a simple "slip-weakening'' criterion was adopted to simulate shear strength drop along the rupture surface. We investigate the mechanical processes occurring during triggering and propagation of an avalanche mobilizing shallowly dipping layers. Incipient deformation forms a pop-up structure at the toe of the dip slope. As the avalanche propagates, the pop-up deforms into an overturned fold, which overrides the surface of separation along a decollement. Simultaneously, uphill layers slide at high velocity (125 km/h) and are folded and disrupted as they reach the toe of the dip slope. The avalanche foot forms a wedge that is pushed forward as deformed rocks accrete at its rear. We simulated five cross sections across the Jiufengershan avalanche, which differ in the geometry of the surface of separation. Topographic and simulated surface profiles are similar. The friction coefficient at the surface of separation determined from back analysis is abnormally low (mu(SS) = 0.2), possibly due to lubrication by liquefied soils. The granular deposits of simulated earthquake- and rain-triggered avalanches are similar.
ISSN: 0148-0227

hal-00420882
https://hal.archives-ouvertes.fr/hal-00420882
DOI : 10.1029/2008JF001075