Éditeur(s) : HAL CCSD Oxford University Press (OUP)
Résumé : International audience
Deciphering the evolutionary processes driving nucleotide variation in multiallelic genes is limited by the number of genetic systems in which such genes occur. The complementary sex determiner (csd) gene in the honey bee Apis mellifera is an informative example for studying allelic diversity and the underlying evolutionary forces in a well-described model of balancing selection. Acting as the primary signal of sex determination, diploid individuals heterozygous for csd develop into females, whereas csd homozygotes are diploid males that have zero fitness. Examining 77 of the functional heterozygous csd allele pairs, we established a combinatorical criteria that provide insights into the minimum number of amino acid differences among those pairs. Given a data set of 244 csd sequences, we show that the total number of csd alleles found in A. mellifera ranges from 53 (locally) to 87 (worldwide), which is much higher than was previously reported (20). Using a coupon-collector model, we extrapolate the presence of in total 116-145 csd alleles worldwide. The hypervariable region (HVR) is of particular importance in determining csd allele specificity, and we provide for this region evidence of high evolutionary rate for length differences exceeding those of microsatellites. The proportion of amino acids driven by positive selection and the rate of nonsynonymous substitutions in the HVR-flanking regions reach values close to 1 but differ with respect to the HVR length. Using a model of csd coalescence, we identified the high originating rate of csd specificities as a major evolutionary force, leading to an origin of a novel csd allele every 400,000 years. The csd polymorphism frequencies in natural populations indicate an excess of new mutations, whereas signs of ancestral transspecies polymorphism can still be detected. This study provides a comprehensive view of the enormous diversity and the evolutionary forces shaping a multiallelic gene.
ISSN: 0737-4038

hal-01544758
https://hal.archives-ouvertes.fr/hal-01544758
DOI : 10.1093/molbev/mst207

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Deep crustal and mantle rocks are exhumed in core complex mode of extension in three types of structures: metamorphic core complexes, oceanic core complexes and magma poor passive margins. Using available analogue and numerical models and their comparison with natural examples, the present paper reviews the mechanical processes involved in these different types of extensional setting. Three main aspects are considered: i) the primary role of lithosphere rheology, ii) the lithosphere-scale patterns of progressive deformation that lead to the exhumation of deep metamorphic or mantle rocks and iii) the initiation and development of detachment zones. Crustal core complexes develop in continental lithospheres whose Moho temperature is higher than 750 °C with “upper crust-dominated” strength profiles. Contrary to what is commonly believed, it is argued from analogue and numerical models that detachments that accommodate exhumation of core complexes do not initiate at the onset of extension but in the course of progressive extension when the exhuming ductile crust reaches the surface. In models, convex upward detachments result from a rolling hinge process. Mantle core complexes develop in either the oceanic lithosphere, at slow and ultra-slow spreading ridges, or in continental lithospheres, whose initial Moho temperature is lower than 750 °C, with “sub-Moho mantle-dominated” strength profiles. It is argued that the mechanism of mantle exhumation at passive margins is a nearly symmetrical necking process at lithosphere scale without major and permanent detachment, except if strong strain localization could occur in the lithosphere mantle. Distributed crustal extension, by upper crust faulting above a décollement along the ductile crust increases toward the rift axis up to crustal breakup. Mantle rocks exhume in the zone of crustal breakup accommodated by conjugate mantle shear zones that migrate with the rift axis, during increasing extension.
ISSN: 0040-1951

insu-01610186
https://hal-insu.archives-ouvertes.fr/insu-01610186
https://hal-insu.archives-ouvertes.fr/insu-01610186/document
https://hal-insu.archives-ouvertes.fr/insu-01610186/file/brun-tect-2017.pdf
DOI : 10.1016/j.tecto.2017.09.017

Éditeur(s) : HAL CCSD
Résumé : International audience
XX

hal-01283581
https://hal.archives-ouvertes.fr/hal-01283581

Éditeur(s) : HAL CCSD
Résumé : International audience
This work presents a synthesis of the present-day knowledge on both emerged and submerged carbonate platforms of the Guadeloupe archipelago. Onshore and offshore data acquired during the KaShallow project are presented. Since the early Zanclean, some isolated platforms developed onto a Jurassic to Tortonian basement which displayed reliefs inherited from a major extensional tectonic episode dated from −8 to −5 Ma. Marie-Galante, Grande Terre and the southern shelf of Grande-Terre show strong similarities with Zanclean to Gelasian red-algal facies upward changing into early Calabrian coral facies. A major erosional unconformity (SB2) was recognized and allows to distinguish two early Calabrian formations (Calcaires à Agaricia Formation and Calcaires à Acropora Formation). The final emersion of these platforms is late Calabrian. The La Désirade platform displays Zanclean to early Piacenzian red-algal facies upward changing into coral facies. This platform emerged as soon as in the late Piacenzian. The island subsided again in relation with later extensional tectonic episode and early Calabrian reef platform then unconformably deposited. The Colombie bank deposits comprise Pliocene basinal deposits overlain by late Calabrian coral reefs. The Flandre bank might have emerged synchronously with La Désirade but was drowned only in the late Pleistocene-Holocene interval. Four extensional tectonic episodes have been identified in the late Miocene-Recent interval. Their effects depend on the location of the platforms within the fore-arc.
Bulletin Société Géologique de France

insu-00816463
https://hal-insu.archives-ouvertes.fr/insu-00816463
DOI : 10.2113/gssgfbull.184.1-2.99

Éditeur(s) : HAL CCSD Société Géologique de France
Résumé : Les fluides géologiques dans les bassins sédimentaires
ISSN: 0037-9409

hal-01685491
https://hal.archives-ouvertes.fr/hal-01685491
DOI : 10.1051/bsgf/2017200

Éditeur(s) : HAL CCSD Société géologique de France
Résumé : International audience
EISSN: 1777-5817

hal-01672822
https://hal-amu.archives-ouvertes.fr/hal-01672822
DOI : 10.1051/bsgf/2017183