Éditeur(s) : HAL CCSD
Résumé : In a perfect-deficit approach (Yi, 2012), the daily maximum carbon storage capacity (CPC) of a given ecosystem for each year defines the perfect annual CPC curve. Deficits are the differences in the daily observational data for a given year against a perfect curve. The area between this curve and instantaneous canopy photosynthetic rates represents the potential productivity. Using an 11-year (2004 – 2014) eddy covariance flux and meteorological data, this perfect-deficit approach was used to examine the relationship between potential productivity and droughts occurring in 2005 and 2010 in a tropical rainforest of French Guiana, South America. Surprisingly, CPC deficits were only reduced by 24% (2005) and 19% (2010) from their respective perfect CPCs, indicating a subtle effect of drought to ecosystem productivity. Highest precipitation occurred in 2010 but precipitation deficits dropped drastically during this year (71% reduction from its perfect value) which reflects a drought condition. However, its deficits showed no correlation annually and seasonally. Soil water content (SWC) appeared to be the single driver for CPC deficits during long dry periods but is weakly correlated (r = 0.30; P <0.01 and r = 0.31; P <0.01, in 2005 and 2010, respectively). These results indicate that soil water is not a major limiting factor for productivity of this ecosystem during drought periods. In contrast, global radiation (Rg) corresponds to the peak of CPC deficits in 2010, but only 19% had been reduced from its ideal value. Yet, highest gross primary production (GPP) of 4106±231 gCm−2yr−1 occurred this year (mean 3753±231 gCm−2yr−1). Therefore, smaller deficits in Rg coupled with sufficient water may have induced higher productivity in 2010. Nevertheless, weaker correlations between potential productivity and climatic drivers may imply that other controlling aspects such as biological constraints may also have an effect to the dynamics of potential productivity during drought events, hence, must also be considered.
AGU Fall Meeting 2015
San Francisco, United States

hal-01269439
https://hal.archives-ouvertes.fr/hal-01269439
PRODINRA : 338570

Éditeur(s) : HAL CCSD Wiley
Résumé : absent
ISSN: 1354-1013

hal-01204212
https://hal.archives-ouvertes.fr/hal-01204212
PRODINRA : 261473
PUBMED : 23996917

Éditeur(s) : HAL CCSD Cambridge University Press (CUP)
Résumé :  
Large seasonal variation in the rate of change in girth of tropical rain-forest tree species has been described, but its origin is still under debate. We tested whether this variation might be related to variation in atmospheric relative humidity through its influence on bark water content and thickness. Variation in trunk circumference of 182 adult trees was measured about twice a month in an undisturbed tropical rain forest over 18mo using dendrometers. Furthermore, a laboratory experiment was conducted to test the direct influence of relative air humidity on bark water content and thickness. In the field, most trees displayed highly positive rates of change in girth at the onset of the wet season, while a quarter of the trees displayed negative changes during long dry seasons, whatever their total annual growth. This variation was correlated with environmental conditions, particularly with atmospheric relative humidity. Trees with high bark water content and thickness displayed a stronger decrease in girth during the dry season. In the chamber experiment, desiccation induced a decrease in the diameter of the trunk sections in tandem with a decrease in bark water content. As a result, seasonal variation in the rate of change in girth of tropical rain-forest trees reflects variation in trunk biophysical properties, through the influence of relative humidity on bark properties, but not directly variation in secondary growth.
ISSN: 0266-4674

hal-01032186
https://hal.archives-ouvertes.fr/hal-01032186
DOI : 10.1017/S0266467410000155

Éditeur(s) : HAL CCSD Elsevier
Résumé : Vegetation phenology is the study of the timing of seasonal events that are considered to be the result of adaptive responses to climate variations on short and long time scales. In the field of remote sensing of vegetation phenology, phenological metrics are derived from time series of optical data. For that purpose, considerable effort has been specifically focused on developing noise reduction and cloud-contaminated data removal techniques to improve the quality of remotely-sensed time series. Comparative studies between time series composed of satellite data acquired under clear and cloudy conditions and from radiometric data obtained with high accuracy from ground-based measurements constitute a direct and effective way to assess the operational use and limitations of remote sensing for predicting the main plant phenological events. In the present paper, we sought to explicitly evaluate the potential use of MODerate resolution Imaging Spectroradiometer (MODIS) remote sensing data for monitoring the seasonal dynamics of different types of vegetation cover that are representative of the major terrestrial biomes, including temperate deciduous forests, evergreen forests, African savannah, and crops. After cloud screening and filtering, we compared the temporal patterns and phenological metrics derived from in situ NDVI time series and from MODIS daily and 16-composite products. We also evaluated the effects of residual noise and the influence of data gaps in MODIS NDVI time series on the identification of the most relevant metrics for vegetation phenology monitoring. The results show that the inflexion points of a model fitted to a MODIS NDVI time series allow accurate estimates of the onset of greenness in the spring and the onset of yellowing in the autumn in deciduous forests (RMSE <= one week). Phenological metrics identical to those provided with the MODIS Global Vegetation Phenology product (MDC12Q2) are less robust to data gaps, and they can be subject to large biases of approximately two weeks or more during the autumn phenological transitions. In the evergreen forests, in situ NDVI time series describe the phenology with high fidelity despite small temporal changes in the canopy foliage. However, MODIS is unable to provide consistent phenological patterns. In crops and savannah, MODIS NDVI time series reproduce the general temporal patterns of phenology, but significant discrepancies appear between MODIS and ground-based NDVI time series during very localized periods of time depending on the weather conditions and spatial heterogeneity within the MODIS pixel. In the rainforest, the temporal pattern exhibited by a MODIS 16-day composite NDVI time series is more likely due to a pattern of noise in the NDVI data structure according to both rainy and dry seasons rather than to phenological changes. More investigations are needed, but in all cases, this result leads us to conclude that MODIS time series in tropical rainforests should be interpreted with great caution. (C) 2013 Elsevier Inc. All rights reserved.
ISSN: 0034-4257

hal-01032407
https://hal.archives-ouvertes.fr/hal-01032407
DOI : 10.1016/j.rse.2013.01.010

Éditeur(s) : HAL CCSD Elsevier
Résumé : absent
ISSN: 0034-4257

hal-01019844
https://hal.archives-ouvertes.fr/hal-01019844
DOI : 10.1016/j.rse.2012.03.012

Éditeur(s) : HAL CCSD
Résumé : absent
Xèmes Journées d'Ecologie fonctionnelle
La Grande Motte, France

hal-01032384
https://hal.archives-ouvertes.fr/hal-01032384

Éditeur(s) : HAL CCSD
Résumé :  
absent
Programme National coordonné ANR " ECCO "
Toulouse, France

hal-01032072
https://hal.archives-ouvertes.fr/hal-01032072

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : Though the root biomass of tropical rainforest trees is concentrated in the upper soil layers, soil water uptake by deep roots has been shown to contribute to tree transpiration. A precise evaluation of the relationship between tree dimensions and depth of water uptake would be useful in tree-based modelling approaches designed to anticipate the response of tropical rainforest ecosystems to future changes in environmental conditions. We used an innovative dual-isotope labelling approach (deuterium in surface soil and oxygen at 120-cm depth) coupled with a modelling approach to investigate the role of tree dimensions in soil water uptake in a tropical rainforest exposed to seasonal drought. We studied 65 trees of varying diameter and height and with a wide range of predawn leaf water potential (I-pd) values. We confirmed that about half of the studied trees relied on soil water below 100-cm depth during dry periods. I-pd was negatively correlated with depth of water extraction and can be taken as a rough proxy of this depth. Some trees showed considerable plasticity in their depth of water uptake, exhibiting an efficient adaptive strategy for water and nutrient resource acquisition. We did not find a strong relationship between tree dimensions and depth of water uptake. While tall trees preferentially extract water from layers below 100-cm depth, shorter trees show broad variations in mean depth of water uptake. This precludes the use of tree dimensions to parameterize functional models.
ISSN: 0029-8549

hal-01032433
https://hal.archives-ouvertes.fr/hal-01032433
DOI : 10.1007/s00442-013-2724-6

Éditeur(s) : HAL CCSD
Résumé : Biogenic volatile organic compound (BVOCs) emissions play an important role in regional air quality and global atmospheric chemistry. In addition, these natural VOC emissions serve important biological functions including attracting and repelling pollinators and herbivores. Some biological organisms use ambient air as a communication medium and the oxidation of these compounds brings about the concentration gradients sensed by insects and other organisms. Isoprene is the predominant BVOC emitted by vegetation and tropical forests are the dominant global source. This compound is very reactive in the atmosphere and contributes to the reactions that control tropospheric oxidant concentrations and thus the concentrations and lifetimes of longer-lived species. This paper presents a study on the seasonal variations in isoprene and some other significant BVOCs such as µ-pinene, µ-pinene, limonene, e-µ ocimene and longifolene, measured at the Guyaflux Tower located in a wet tropical forest in Paracou French Guiana (5o16´54´´N, 52o54´44´´W), during the year of 2011, using the Relaxed Eddy Accumulation technique at approximately 20 meters high above the canopy. The results show a lower concentration of isoprene during the month of February and March which correspond to the wet season with an average of 0,545 µg/m3 and 0,341 µg/m3, respectively followed by a slight increase in middle April (still wet season) and a higher concentration later in mid-June. The same behavior was observed for µ-pinene with higher concentrations for the same periods as isoprene however with a smaller increase. All the other compounds had concentrations below 1 µg/m3during the whole year: The monoterpene, e-µ ocimene, was observed and is known as a stress compound but the vegetation at the site did not face any known severe stress condition such as excessive drought or flooding. Concerning the fluxes, the results showed that just a small amount of BVOCs were deposited by wet or dry process and the majority of them were released in the atmosphere. Isoprene was by far the biogenic volatile organic compound with the highest concentration and flux, followed by alpha-pinene. The lowest concentration and flux rate for all the studied compounds was observed during the months of March and late July and beginning of August indicating a lower production of those BVOCs by vegetation during those periods. Previous limited studies in Amazonia and the Congo suggested that a higher concentration and flux rate of isoprene and µ-pinene should be expected during the dry season with lower emissions during the wet season, which is in relative agreement with what was observed at this tropical forest site in French Guiana. The exceptions were observed in April and June which correspond to a long wet period in which the concentration of isoprene and µ-pinene increased more than it was expected for this time of the year. The observations will be compared to output from the global chemistry transport model CAM-chem, which includes the MEGAN biogenic emissions model.
10th EGU General Assembly
vienne, Austria

hal-01204214
https://hal.archives-ouvertes.fr/hal-01204214
PRODINRA : 276525

Éditeur(s) : HAL CCSD Wiley
Résumé : Seasonal variations in environmental conditions influence the functioning of the whole ecosystem of tropical rain forests, but as yet little is known about how such variations directly influence the leaf gas exchange and transpiration of individual canopy tree species. We examined the influence of seasonal variations in relative extractable water in the upper soil layers on predawn leaf water potential, saturated net photosynthesis, leaf dark respiration, stomatal conductance, and tree transpiration of 13 tropical rain forest canopy trees (eight species) over 2yr in French Guiana. The canopies were accessed by climbing ropes attached to the trees and to a tower. Our results indicate that a small proportion of the studied trees were unaffected by soil water depletion during seasonal dry periods, probably thanks to efficient deep root systems. The trees showing decreased tree water status (i.e., predawn leaf water potential) displayed a wide range of leaf gas exchange responses. Some trees strongly regulated photosynthesis and transpiration when relative extractable water decreased drastically. In contrast, other trees showed little variation, thus indicating good adaptation to soil drought conditions. These results have important applications to modeling approaches: indeed, precise evaluation and grouping of these response patterns are required before any tree-based functional models can efficiently describe the response of tropical rain forest ecosystems to future changes in environmental conditions.
ISSN: 0006-3606

hal-01032411
https://hal.archives-ouvertes.fr/hal-01032411
DOI : 10.1111/j.1744-7429.2012.00902.x

Éditeur(s) : HAL CCSD Wiley
Résumé :  
The lack of information on the ways seasonal drought modifies the CO2 exchange between Neotropical rainforest ecosystems and the atmosphere and the resulting carbon balance hinders our ability to precisely predict how these ecosystems will respond as global environmental changes force them to face increasingly contrasting conditions in the future. To address this issue, seasonal variations in daily net ecosystem productivity (NEPd) and two main components of this productivity, daily total ecosystem respiration (REd) and daily gross ecosystem productivity (GEPd), were estimated over 2 years at a flux tower site in French Guiana, South America (511605400N, 5215404400W). We compared seasonal variations between wet and dry periods and between dry periods of contrasting levels of intensity (i.e. mild vs. severe) during equivalent 93-day periods. During the wet periods, the ecosystem was almost in balance with the atmosphere (storage of 9.0 gCm_2). Seasonal dry periods, regardless of their severity, are associated with higher incident radiation and lower REd combined with reduced soil respiration associated with low soil water availability. During the mild dry period, as is normally the case in this region, the amount of carbon stored in the ecosystem was 32.7 gCm_2. Severe drought conditions resulted in even lower REd, whereas the photosynthetic activity was only moderately reduced and no change in canopy structure was observed. Thus, the severe dry period was characterized by greater carbon storage (64.6 gCm_2), emphasizing that environmental conditions, such as during a severe drought, modify the CO2 exchange between Neotropical rainforest ecosystems and the atmosphere and potentially the resulting carbon balance.
ISSN: 1354-1013

hal-01032067
https://hal.archives-ouvertes.fr/hal-01032067
DOI : 10.1111/j.1365-2486.2008.01610.x

Éditeur(s) : HAL CCSD INRA
Résumé : Afin de mesurer en continu la respiration du sol, deux laboratoires de l'INRA ont développé deux systèmes automatiques basés sur des designs et automatismes très similaires. Le choix de la mesure des échanges gazeux s'est porté sur les deux principes bien connus des méthodes dynamiques, à savoir, le système ouvert ou fermé (Field et al. 1989). Ces deux méthodes présentent chacune leurs avantages et leurs inconvénients et chaque équipe a fait ses choix en fonction du matériel disponible, des conditions environnementales de mesure, des budgets ou des techniques maîtrisées. La prise en compte poussée (calculs préalables, vérification a postériori) des problèmes potentiels de mesure rapportés dans la littérature a conduit à réaliser deux systèmes correctement dimensionnés.
ISSN: 0762-7339

hal-01032041
https://hal.archives-ouvertes.fr/hal-01032041

Éditeur(s) : HAL CCSD Wiley
Résumé : International audience
Leaf dark respiration (R-dark) represents an important component controlling the carbon balance in tropical forests. Here, we test how nitrogen (N) and phosphorus (P) affect R-dark and its relationship with photosynthesis using three widely separated tropical forests which differ in soil fertility.R-dark was measured on 431 rainforest canopy trees, from 182 species, in French Guiana, Peru and Australia. The variation in R-dark was examined in relation to leaf N and P content, leaf structure and maximum photosynthetic rates at ambient and saturating atmospheric CO2 concentration.We found that the site with the lowest fertility (French Guiana) exhibited greater rates of R-dark per unit leaf N, P and photosynthesis. The data from Australia, for which there were no phylogenetic overlaps with the samples from the South American sites, yielded the most distinct relationships of R-dark with the measured leaf traits.Our data indicate that no single universal scaling relationship accounts for variation in R-dark across this large biogeographical space. Variability between sites in the absolute rates of R-dark and the R-dark : photosynthesis ratio were driven by variations in N- and P-use efficiency, which were related to both taxonomic and environmental variability.
ISSN: 0028-646X

hal-01559483
https://hal.univ-lorraine.fr/hal-01559483
DOI : 10.1111/nph.13992

Éditeur(s) : HAL CCSD Springer Verlag/EDP Sciences
Résumé : Key messageWe review the recent findings on the influence of drought on tree mortality, growth or ecosystem functioning in tropical rainforests. Drought plays a major role in shaping tropical rainforests and the response mechanisms are highly diverse and complex. The numerous gaps identified here require the international scientific community to combine efforts in order to conduct comprehensive studies in tropical rainforests on the three continents. These results are essential to simulate the future of these ecosystems under diverse climate scenarios and to predict the future of the global earth carbon balance.[br/]ContextTropical rainforest ecosystems are characterized by high annual rainfall. Nevertheless, rainfall regularly fluctuates during the year and seasonal soil droughts do occur. Over the past decades, a number of extreme droughts have hit tropical rainforests, not only in Amazonia but also in Asia and Africa. The influence of drought events on tree mortality and growth or on ecosystem functioning (carbon and water fluxes) in tropical rainforest ecosystems has been studied intensively, but the response mechanisms are complex.[br/]AimsHerein, we review the recent findings related to the response of tropical forest ecosystems to seasonal and extreme droughts and the current knowledge about the future of these ecosystems.[br/]ResultsThis review emphasizes the progress made over recent years and the importance of the studies conducted under extreme drought conditions or in through-fall exclusion experiments in understanding the response of these ecosystems. It also points to the great diversity and complexity of the response of tropical rainforest ecosystems to drought.[br/]ConclusionThe numerous gaps identified here require the international scientific community to combine efforts in order to conduct comprehensive studies in tropical forest regions. These results are essential to simulate the future of these ecosystems under diverse climate scenarios and to predict the future of the global earth carbon balance.
ISSN: 1286-4560

hal-01269438
https://hal.archives-ouvertes.fr/hal-01269438
DOI : 10.1007/s13595-015-0522-5
PRODINRA : 338568

Éditeur(s) : HAL CCSD Wiley
Résumé : Understanding the mechanisms generating species distributions remains a challenge, especially in hyperdiverse tropical forests. We evaluated the role of rainfall variation, soil gradients and herbivory on seedling mortality, and how variation in seedling performance along these gradients contributes to habitat specialisation. In a 4-year experiment, replicated at the two extremes of the Amazon basin, we reciprocally transplanted 4638 tree seedlings of 41 habitat-specialist species from seven phylogenetic lineages among the three most important forest habitats of lowland Amazonia. Rainfall variation, flooding and soil gradients strongly influenced seedling mortality, whereas herbivory had negligible impact. Seedling mortality varied strongly among habitats, consistent with predictions for habitat specialists in most lineages. This suggests that seedling performance is a primary determinant of the habitat associations of adult trees across Amazonia. It further suggests that tree diversity, currently mostly harboured in terra firme forests, may be strongly impacted by the predicted climate changes in Amazonia.
ISSN: 1461-023X

hal-01531751
https://hal.archives-ouvertes.fr/hal-01531751
DOI : 10.1111/ele.12661
PRODINRA : 387284