Éditeur(s) : HAL CCSD Oxford University Press (OUP)
Résumé : International audience
Anisotropy of low-field magnetic susceptibility (AMS) of basaltic lava flows can give some clues about post-emplacement tilting occurring in volcanic sequences. Such a study has been carried out on a sequence of 19 successive lava flows from Kerguelen Archipelago. Surprisingly, two different patterns were observed. The first one - herein called normal fabric - is consistent with the lava-flow direction inferred from geological observations, whereas the second one observed for about 70 per cent of the analysed samples - herein called abnormal fabric - appears to be unrelated to the shear history of the lava flows during their emplacements. These abnormal fabrics are not strictly inverse fabric but seem to have a more complex origin. The unusual nature of these abnormal fabrics has been confirmed by lattice preferred orientation of plagioclases obtained from high-resolution electron backscattered diffraction measurements. The aim of this study is to propose a physical interpretation of these fabrics. A first step in our understanding was to clearly identify the nature and the magnetic properties of the Fe-Ti oxides assemblage. Thus, we present a comprehensive rock magnetic analysis relying on low- and high-temperature thermomagnetic curves (K-T), crossover diagrams, first-order reversal curves, ore-microscopy, Mössbauer measurements and electron backscattered images. We found that in the present case the abnormal fabrics are probably linked to a mixture of prevailing single domain (SD) strongly interacting grains population and a subsidiary multidomain grains population. SD grains are identified as small magnetite crystallized within the interstitial glass in globular aggregates along the silicate framework. Then a question arises: to what extent such SD interacting grains in globular aggregates can affect the magnetic susceptibility and its anisotropy? To answer this question, we developed a physical model in which the total energy density of an SD grain with an uniaxial anisotropy is minimized. In this model, the distribution function of the direction of the magnetic interaction field is comprised between two boundary states. It is either isotropic, which formally corresponds to the thermal demagnetized state, or it is ordered, which formally corresponds to the Alternative Field demagnetized state. We show that in both cases the degree of anisotropy decreases as the interaction field increases. Thus, we conclude that the abnormal fabric encountered in this study can be simply explained by strong magnetostatic interactions that would explain the large scattering of AMS often observed in basaltic lava flows.
ISSN: 0956-540X

hal-00716449
https://hal.archives-ouvertes.fr/hal-00716449
https://hal.archives-ouvertes.fr/hal-00716449/document
https://hal.archives-ouvertes.fr/hal-00716449/file/gji-S-12-HAL.pdf
DOI : 10.1111/J.1365-246X.2012.05421.X

Éditeur(s) : HAL CCSD
Résumé : Several major earthquakes have struck the 2500 km long Himalayan range during the past century. However, both the maximum size of such earthquakes and the probability of occurrence of a magnitude 9 megaquake are still a mater of debate. In this framework it is of key importance to investigate the lateral segmentation of the Himalayan arc in order to deepen our understanding of the mechanisms that control such events as well as their extents. Besides the remarkably uniform tectonic set-up and the fact that most studies on the Himalayas have focused on Central Nepal, several indications of along strike changes can be gathered.This thesis brings new constraints on lateral variations of crustal structure and of deformation between western Nepal (~80°E) and eastern Bhutan (~92°E).The first part of this thesis focuses on the lateral variations of crustal structure. In the past three years we have carried out four land gravity campaigns. We have established 366 new gravity measurement points to fill the data gaps in central and western Nepal as well as in Bhutan. This new dataset, together with available seismological data, is used to constrain thermo-mechanical models of the bending of the India plate underneath the Himalayas. While the inferred crustal geometry does not exhibit major along-strike variations over central and eastern Nepal, the shorter wavelength flexure of the lithosphere in Bhutan is associated with a weaker upper mantle rheology.The second part focuses on the lateral variations of recent deformation in the Himalayas. Fifteen years of paleoseismological investigations have extended the catalogue of major Himalayan events over the last millennium. Combining these information with secular loading, we assess the spatial and temporal stress changes on the Main Himalayan Thrust along the orogen over the last nine centuries. Our calculations indicate that inter-seismic loading has now nearly overcome the Coulomb stress decrease caused by the great ~1100 medieval earthquake. Our results also point out that the 1897 Shillong plateau earthquake does not have a major influence on the stress accumulated on the Main Himalayan Thrust since then. In order to better characterize active tectonics in the Bhutan Himalayas where no studies were done so far, we carried out a morphotectonic analysis in the south-central part of the kingdom. We show that the same amount of Holocene deformation is accommodated on the frontal thrust in Bhutan as on the neighbouring portions of the Himalayan arc. We also find evidences for two major (M>8) earthquakes on this thrust in the Bhutan Himalayas during the last millennium. Our results therefore show that Bhutan cannot be considered as a seismic gap. They also challenge the interpretation of one single ~1100 medieval mega-event that would have ruptured the Main Frontal Thrust from central Nepal to eastern Bhutan.
Au cours du dernier siècle, plusieurs séismes majeurs ont affecté l'Himalaya. Cependant, la taille maximale de ces événements et la probabilité d'occurrence de méga-séismes avec des magnitudes proches de 9 sont toujours matière à débat. L'étude de la segmentation de l'arc Himalayen est donc primordiale afin de comprendre les mécanismes qui contrôlent ces séismes ainsi que leur extension spatiale. La compréhension du cycle sismique en Himalaya est aujourd'hui essentiellement basée sur des études menées au Népal central, ce qui limite notre connaissance de son fonctionnement tri-dimensionnel. Ce travail de thèse permet d'apporter de nouvelles contraintes sur les variations latérales de la déformation crustale dans la zone comprise entre l'ouest Népal (~80°E) et l'est Bhoutan (~92°E). La première partie de cette thèse est consacrée à l'étude des variations latérales de la structure lithosphérique. Quatre campagnes gravimétriques ont été réalisées entre 2010 et 2012. Elles ont permis d'étendre le réseau gravimétrique Népalais jusqu'à l'ouest Népal et d'établir le premier réseau gravimétrique Bhoutanais. Ce nouveau jeu de données, combiné avec les données sismologiques disponibles, permet de contraindre des modèles thermo-mécaniques de la flexure de la plaque Indienne sous l'Himalaya. Les résultats suggèrent qu'il n'existe pas de variations latérales majeures du comportement mécanique de la lithosphère Indienne entre le centre et l'est Népal contrairement au Bhoutan où une rigidité flexurale plus faible est nécessaire pour expliquer les données.La deuxième partie de cette thèse est consacrée à l'étude des variations latérales des déformations récentes dans le prisme Himalayen. Les études paléosismologiques menées depuis 15 ans en Himalaya ont permis d'étendre le catalogue des événements majeurs sur le dernier millénaire. En intégrant à la fois les contraintes disponibles sur ces séismes majeurs et le chargement séculaire, nous étudions les variations spatiales et temporelles de l'état de contrainte du chevauchemlent Himalayen principal le long de l'arc. Nos calculs montrent que même dans la cas où un méga-séisme se serait produit en ~1100 en Himalaya, le chargement séculaire a quasiment compensé la chute de contrainte associée. Les modèles montrent aussi que le séisme du Shillong ne joue pas un rôle majeur sur les contraintes accumulées sur le chevauchement Himalayen depuis 1897 au niveau du Bhoutan. Enfin, nous présentons les premières contraintes sur la tectonique active au Bhoutan. L'étude morphotectonique réalisée au centre du Sud-Bhoutan a permis de montrer que la majeure partie de la déformation Holocène est accommodée au niveau du front Himalayen, comme au Népal. Nous montrons aussi des évidences de ruptures de surface avec des décalages verticaux de plusieurs mètres associés à deux séismes majeurs sur le dernier millénaire. Ces évidences remettent en cause l'interprétation d'un méga-séisme en ~1100.
https://tel.archives-ouvertes.fr/tel-01002381

NNT : 2013MON20074
tel-01002381
https://tel.archives-ouvertes.fr/tel-01002381
https://tel.archives-ouvertes.fr/tel-01002381/document
https://tel.archives-ouvertes.fr/tel-01002381/file/35970_BERTHET_2013_archivage_cor.pdf

Éditeur(s) : HAL CCSD
Résumé : Spatial variability of ground motion may be explained by local soil conditions; it is the so-called "site effects". Site effects are responsible for increasing duration and important amplification of strong ground motion during earthquakes and must be considered as a key parameter in local seismic hazard assessment. French West Indies are prone to strong site effects because of a particular geology, characterized by soft soil deposits and strong alteration of volcanic deposits. In this framework, and considering that French West Indies are considered as a high seismicity level zone in the French building code, part of seismic hazard mitigation policy consists in technical studies to perform identification and mapping of zones characterized by homogeneous seismic response and quantification of associated ground motion. It is the aim of seismic microzonations. In this presentation, we will expose the methodology used on the scale of municipalities for mapping homogeneous seismic areas, based on a study of geological and geotechnical conditions and some geophysical testings. Then, a study of vulnerability of buildings allows to estimate the probability of damage on various sectors for a scenario of risk corresponding to the seismic microzonation.
19ème Conférence Géologique de la Caraïbe
Le Gosier, Guadeloupe, France

hal-00614300
https://hal-brgm.archives-ouvertes.fr/hal-00614300

Éditeur(s) : HAL CCSD American Geophysical Union
Résumé : International audience
We present the results of a paleomagnetic study of seven new volcanic sections (146 flows) from Kerguelen Archipelago. For two of these sections, preliminary (;40;Ar/;39;Ar) ages are reported to aid in the calibration of the paleomagnetic results. The primary contribution of this report, however, is a compilation of these new data with those already published in order to describe statistically the characteristics of the paleomagnetic field as recorded by the Kerguelen flood basalts. In total, 258 paleomagnetic directions sampled at 13 stratigraphic sections through the lava pile are available and span an approximately 5 Ma window: from 25 to 30 Ma. The composite section represents at least 11 polarity zones that are correlated to the reference geomagnetic polarity timescale. Our approach is to investigate the average normal and reversed polarity field directions over this 5 Ma window. We calculated a paleomagnetic pole found to be located at ;λ; = 85.5°N, = 189.3°E (A;95; = 2.3°, K = 16.5, N = 233). This pole is in close agreement with the coeval paleomagnetic poles obtained from different worldwide places when analyzed in the Indo-Atlantic hot spot reference frame. In the statistical analysis we tackle the specific question: Is the secular variation isotropic? This question is directly related to the occurrence of a longitudinal confinement of the virtual geomagnetic poles, which is still a matter of debate among paleomagnetists. By means of statistical tests we show that the paleomagnetic data from Kerguelen agree with an isotropic model for paleosecular variation. Finally, we present adjustments to Camps and Prévot's (1996) statistical model, developed for some Northern Hemisphere latitudes, to the Southern Hemisphere paleomagnetic data from Kerguelen.
ISSN: 0148-0227

hal-00407636
https://hal.archives-ouvertes.fr/hal-00407636
https://hal.archives-ouvertes.fr/hal-00407636/document
https://hal.archives-ouvertes.fr/hal-00407636/file/pcamps-JGR2007.pdf
DOI : 10.1029/2006JB004648

Éditeur(s) : HAL CCSD Wiley
Résumé : International audience
Climatic niche conservatism, the tendency of species-climate associations to remain unchanged across space and time, is pivotal for forecasting the spread of invasive species and biodiversity changes. Indeed, it represents one of the key assumptions underlying species distribution models (SDMs), the main tool currently available for predicting range shifts of species. However, to date, no comprehensive assessment of niche conservatism is available for the marine realm. We use the invasion by Indo-Pacific tropical fishes into the Mediterranean Sea, the world's most invaded marine basin, to examine the conservatism of the climatic niche. We show that tropical invaders may spread far beyond their native niches and that SDMs do not predict their new distributions better than null models. Our results suggest that SDMs may underestimate the potential spread of invasive species and call for prudence in employing these models in order to forecast species invasion and their response to environmental change.
ISSN: 1461-023X

hal-01136126
https://hal.archives-ouvertes.fr/hal-01136126
DOI : 10.1111/ele.12401

Éditeur(s) : HAL CCSD
Résumé : International audience
In this paper, we investigate image segmentation by region merging. Given any similarity measure between regions , satisfying some weak constraints, we give a general predicate for answering if two regions are to be merged or not during the segmentation process. Our predicate is generic and has six properties. The first one is its inde-pendance with respect to the similarity measure, that leads to a user-independant and adaptative predicate. Second, it is non-parametric, and does not rely on any assumption concerning the image. Third, due to its weak constraints, knowledge may be included in the predicate to fit better to the user's behaviour. Fourth, provided the similarity is well-chosen by the user, we are able to upperbound one type of error made during the image segmentation. Fifth, it does not rely on a particular segmentation algorithm and can be used with almost all region-merging algorithms in various application domains. Sixth, it is calculated quickly, and can lead with appropriated algorithms to very efficient segmentation.
10th IEEE International Conference on Tools with Artificial Intelligence
Taipei, Taiwan

lirmm-01168371
https://hal-lirmm.ccsd.cnrs.fr/lirmm-01168371
https://hal-lirmm.ccsd.cnrs.fr/lirmm-01168371/document
https://hal-lirmm.ccsd.cnrs.fr/lirmm-01168371/file/FioNocICTAI98_Image%20Segmentation%20Using.pdf
DOI : 10.1109/TAI.1998.744885

Éditeur(s) : HAL CCSD
Résumé : International audience
Abstract : Since 2011, the organization of linguistic education for foreigners has changed in France. Now, the FLI concept controls the integration of foreigners in the french society by a transmission of french language and republican values. Our paper is about the questions coming from the West Indies context, specifically in Guadeloupe, and it is looking at the educational matters closed to Haitians natives' people. We are asking questions about the code switching phenomena and are trying to find, out of the blue, how some contextual specific experiments can help the students in being proud of their culture and in changing their vision of scholar and learning system. Feedback from those oral original sessions are aimed at offering solutions to establish a suitable teaching method named FLR.
Depuis 2011, la loi française a renforcé sa politique linguistique en faveur d'une intégration des migrants, mettant en place l'enseignement du français langue d'intégration (FLI). Notre contribution considère dans ce cadre épistémologique les particularités sociolinguistiques et migratoires du territoire de la Guadeloupe et s'intéresse à une didactique contextualisée, notamment en ce qui concerne le public des migrants venus d'Haïti. Les effets de contexte sont interrogés à travers une analyse du dispositif de formation, des postures des formateurs, des écarts observés entre objectifs attendus et réalisés et de l'influence des représentations des apprenants. Nous interrogeons le rôle du contact entre les langues créoles et le français dans les apprentissages. Cette note propose également un projet de remédiation pédagogique adapté aux difficultés relevées et pose les bases d'une approche didactique idoine caractérisée par un travail centré sur la réassurance affective et culturelle.Mots clés : Insécurité linguistique, diglossie, créole haïtien, confiance en soi, langue vernaculaire, langue véhiculaire, outils pédagogiques, didactique contextualisée, didactique sociolinguistique, andragogie, remédiation pédagogique, réassurance.
Troubles du langage, Langue d'enseignement et rendement scolaire. Essai de diagnostic du système éducatif haïtien dans le département de l'Artibonite, Ouvrage collectif (Coordination : Rochambeau LAINY), 2016, L'Harmattan, Paris , 320 pages.

hal-01673268
https://hal.univ-antilles.fr/hal-01673268
https://hal.univ-antilles.fr/hal-01673268/document
https://hal.univ-antilles.fr/hal-01673268/file/FINAL%20ARTICLE%20Fr%C3%A9d%C3%A9ric%20Beaubrun%20communication%20-%20Colloque%20%20Ha%C3%AFti%20pathologies%20du%20langage%20et%20rendement%20scolaire.pdf

Éditeur(s) : HAL CCSD
Résumé : Does the language in which the instructions are formulat- ed affect the execution of a bilingual's motor task? The first experiment studies whether the language used for the instructions influences the motor performances among bilingual children in situation of learning. Eighty bilin-gual French/Creole children (age means 10.4) were distributed into two experimental groups to learn how to perform a motor task. One group received instructions in French and the other one in Creole. The data suggest that the language of presentation affects the execution of a motor task. Both groups had the same performance level at the beginning of the experiment. We noticed that the group taught in Creole obtained better performances than the group taught in French at the end of the learning situation. The results are discussed in terms of their implications to physical education and motor rehabilitation of bilinguals. The two following experiments reported in the present paper concern (i) the differential imagery value of French and Creole and (ii) the influence of language on the recall of sequences of patterned movements in a bilingual population. Creole words were obtained a higher imagery value than French words, certainly because Creole is an oral and vernacular language. Motor recall scores were better when the sequence was presented in Creole compared to French. The generation of visual images by Creole would facilitate the memorization and recall of new sequences of movements. The effect of language on imagery value of words and motor recall among bilingual French–Creole subjects was discussed in terms of nature of information encoding in each language. The goal of the fourt and last study tries to know the language impact on the movement imagery ability of guadeloupean children. A person is able to represent verbal information with an image (Denis, 1989; Paivio, 1986). The language can he influence this ability on bilingual individuals? If Creole has more to do with image than French (Michelot, 2000), this survey considers a distinct language influence on the mental images vividness specified by guadeloupean children. 123 secondary school pupils (average age 13.45) altogether accepted to fill in the Movement Imagery Questionnaire of Hall and Pongrac (1983). This test enables to measure the rapidity of visual and kinaesthetic images. The “Creole” group (59 children; average age 13. 43) got the MIQ translated in Creole and the “French” group (64 children; average age 13.46) the French version of the test. Finally, language does not generally influence the movement imagery capacity. Yet, the kinaesthetic images are more vivid in French than in Creole for the subjects tested, aged from 11 to 13. The subjects aged from 14 to 16 have, only in Creole, more vivid visual images than the subjects aged from 11 to 13. The language affects the movement imagery ability with age of this guadeloupean children.
L'exécution d'une tâche motrice chez des bilingues est-elle affectée par la langue dans laquelle les consignes sont formulées ? Une première expérience a été menée en vue d'analyser si la langue de présentation des consignes influence les performances motrices d'enfants bilingues en situation d'apprentissage. Quatre-vingt bilingues français/créole (âge moyen : 10,4 ans) ont été répartis dans deux groupes expérimentaux afin d'apprendre à réaliser une tâche motrice, l'un recevant les consignes en français et l'autre en créole. Les données suggèrent que la langue de présentation affecte l'exécution d'une tâche motrice. Le groupe enseigné en créole obtient de meilleures performances en fin d'apprentissage comparativement à celles obtenues par le groupe enseigné en français, alors que les deux groupes ont au départ un niveau comparable. Ces résultats sont discutés sur le plan de leur implication pour l'éducation physique et la réadaptation motrice des bilingues. Les deux expérimentations suivantes évaluent (i) la valeur d'imagerie de mots et (ii) le rappel moteur d'enchaînements auprès de bilingues français–créole en faisant varier la langue de présentation. Les mots en créole, supposés susciter plus facilement des images mentales visuelles, car le créole est une langue orale et vernaculaire, ont effectivement obtenu une cote plus élevée que les mots français sur l'échelle de valeur d'imagerie. L'évocation d'images visuelles facilitant la mémorisation et la planification de séquences de mouvements, les performances de rappel obtenues à partir des consignes en créole ont été supérieures à celles obtenues en français. Les effets de la langue de présentation sur la valeur d'imagerie des mots et le rappel moteur d'enchaînements de morphocinèses auprès des participants bilingues sont discutés en termes de nature d'encodage de l'information verbale dans chacune des langues. L'objectif de cette quatrième et dernière recherche est de connaître l'impact de la langue sur la capacité d'imagerie du mouvement d'enfants guadeloupéens. Un individu peut se représenter des informations verbales sous une forme imagée (Denis, 1989; Paivio, 1986). La langue peut-elle influencer cette capacité chez des individus bilingues ? Le créole étant plus imagé que le français (Michelot, 2000), nous prévoyons une influence distincte de la langue sur le degré de vivacité des images mentales. Cent-vingt-trois collégiens guadeloupéens (âge moyen 13.45) ont rempli un questionnaire d'imagerie du mouvement (MIQ de Hall et Pongrac, 1983) mesurant la vivacité d'images visuelles et kinesthésiques. Un groupe «créole» (59 enfants; âge moyen 13.43) l'a passé en créole et un groupe «français» (64 enfants; âge moyen 13.46) en français. Finalement, la langue n'influence pas la capacité d'imagerie mentale de notre échantillon. Mais la vivacité des images kinesthésiques est supérieure en français chez les sujets de 11 à 13 ans et celle des images visuelles des sujets de 14 à 16 ans est supérieure à celle des sujets de 11 à 13 ans seulement en créole. La langue semble influencer la capacité d'imagerie mentale des sujets en fonction de l'âge.
https://tel.archives-ouvertes.fr/tel-00441944

Droits : info:eu-repo/semantics/OpenAccess
tel-00441944
https://tel.archives-ouvertes.fr/tel-00441944
https://tel.archives-ouvertes.fr/tel-00441944/document
https://tel.archives-ouvertes.fr/tel-00441944/file/These_Anciaux_2003_L_enfant_le_creole_et_l_EPS.pdf

Éditeur(s) : HAL CCSD Archaeopress
Résumé : International audience
The first formative occupation of the West Indies was by continental populations, moving up from their place of origin in the Orinoco Basin, shortly before our era. In Martinique these groups, attached to the cedrosan saladoid sub-series, have been well studied and for a considerable time. It is upon this work that we have attempted to build an overall analysis of this phase of the prehistory of the Islands. The research drew upon the results of unpublished field work. This led to a more precise understanding of the nature and constitution of these archeological strata and, in turn, of the organisation of the Amerindian villages and their management of the island space. A review of their artisanal production ( ceramics, stone tools, personal adornment) has given us a closer understanding of these populations. It also provides the basis for a future paleo-ethnographic study. Further, an analysis of the origin of the lithic materials has enabled us to place the ancient saladoid occupation of Martinique both in the geography of the West Indian Arc and in the Carribean Basin as a whole. Progressively a picture was thus put together of pioneer agro-ceramicist groups characterised by a high degree of organisation and by the spiritual concepts expressed in their artisanal production.
Les premières occupations formatives des Antilles sont liées à la migration, peu avant le début de notre ère, de populations continentales originaires du bassin de l'Orénoque. En Martinique, l'étude de ces groupes, rattachés à la sous-série saladoïde cedrosane, a une histoire riche et ancienne. C'est fort de ces acquis que nous avons tenté de réaliser une analyse globale de cette phase de la préhistoire des Antilles. Notre recherche s'appuie sur l'analyse des résultats d'un ensemble d'opérations de terrain inédites. Les informations ainsi obtenues nous permettent d'étudier la nature et le mode de constitution de ces gisements archéologiques. On commence alors à distinguer l'organisation de ces villages amérindiens et le mode de gestion de l'espace insulaire qui s'y rattache. L'analyse de différents types de productions artisanales (céramique, outillage en pierre, parure) nous permet d'accéder à une connaissance plus intime de ces populations. Elle offre aussi les moyens nécessaires à la réalisation d'une future étude palethnographique. Par ailleurs, l'analyse de l'origine géographique des matières premières lithiques nous permet de réintégrer l'occupation saladoïde ancienne de la Martinique dans l'espace géographique qui est le sien!: l'arc antillais et plus largement le bassin caraïbe. Ainsi, se dégage progressivement l'image de groupes pionniers agro-céramistes caractérisés par un très haut degré d'organisation et par la matérialisation permanente de leurs conceptions spirituelles au travers de leur production artisanale.
https://hal.univ-antilles.fr/hal-00966882

ISBN : 1 84171 649 9
hal-00966882
https://hal.univ-antilles.fr/hal-00966882

Éditeur(s) : HAL CCSD Public Library of Science
Résumé : International audience
BACKGROUND: Estrogens are thought to play a critical role in prostate carcinogenesis. It has been suggested that polymorphisms of genes encoding enzymes involved in estrogen metabolism are risk factors for prostate cancer. However, few studies have been performed on populations of African ancestry, which are known to have a high risk of prostate cancer.OBJECTIVE: We investigated whether functional polymorphisms of CYP17, CYP19, CYP1B1, COMT and UGT1A1 affected the risk of prostate cancer in two different populations of African ancestry.METHODS: In Guadeloupe (French West Indies), we compared 498 prostate cancer patients and 565 control subjects. In Kinshasa (Democratic Republic of Congo), 162 prostate cancer patients were compared with 144 controls. Gene polymorphisms were determined by the SNaPshot technique or short tandem repeat PCR analysis. Logistic regression was used to estimate adjusted odds ratios (OR) and 95% confidence intervals (CI).RESULTS: The AA genotype and the A allele of rs4680 (COMT) appeared to be inversely associated with the risk of prostate cancer in adjusted models for both Afro-Caribbean and native African men. For the A allele, a significant inverse association was observed among cases with low-grade Gleason scores and localized clinical stage, in both populations.CONCLUSIONS: These preliminary results support the hypothesis that polymorphisms of genes encoding enzymes involved in estrogen metabolism may modulate the risk of prostate cancer in populations of African ancestry.
ISSN: 1932-6203

hal-01668333
https://hal.univ-antilles.fr/hal-01668333
DOI : 10.1371/journal.pone.0153609
PUBMED : 27074016

Éditeur(s) : Inter-Research
Résumé : The green turtle Chelonia mydas is classified as endangered because of global declines over the past few centuries due to human exploitation and habitat destruction, particularly the loss of nesting areas. We used the number of tracks as an indicator of breeding female abundance at their nesting sites to study the seasonality and trends of turtles breeding at 3 islands in the SW Indian Ocean: Europa, Tromelin and Grande Glorieuse, over 20 yr. On Tromelin, tracks were counted along the entire nesting beach, but on Europa and Grande Glorieuse counts were limited to a proportion of the island. Europa and Tromelin exhibited similar seasonal patterns, with a well-defined peak during the wet season (November–February), compared to a dry season peak for Grande Glorieuse (March–June). The main season was significantly longer on Grande Glorieuse (288 ± 43 d) than on Europa (218 ± 60 d), with Tromelin intermediate (252 ± 43 d). There was greater variation in the start of a season compared to the median and end at all sites throughout the study. Approximately 7178 ± 3053 (n = 19) tracks were recorded annually on the entire nesting beach on Tromelin, compared with 1480 ± 666 (n = 19) on 16% of nesting beaches on Grande Glorieuse and 1361 ± 903 (n = 23) on 26% of beaches on Europa. The number of tracks has increased significantly on Europa (3% yr–1) and Grande Glorieuse (6% yr–1). The increasing number of nesting turtles illustrates the effectiveness of conservation measures on sites formerly exploited by humans.
Endangered Species Research (1613-4796) (Inter-Research), 2007-08-15 , Vol. 3 , P. 217-227

Droits : 2007 Inter-Research
http://archimer.ifremer.fr/doc/00018/12917/9874.pdf
DOI:10.3354/esr003217
http://archimer.ifremer.fr/doc/00018/12917/

Éditeur(s) : HAL CCSD American Chemical Society
Résumé : International audience
Chlordecone is an organochlorine pesticide that was extensively used in the French West Indies to fight weevils in banana plantations from 1973 to 1993. This has led to a persistent pollution of the environment and to the contamination of the local population for several decades with effects demonstrated on human health. Chlordecone accumulates mainly in the liver where it is known to potentiate the action of hepatotoxic agents. However, there is currently no information on its in situ localization in the liver. We have thus evaluated a matrix-assisted laser desorption ionization (MALDI) imaging quantification method based on labeled normalization for the in situ localization and quantification of chlordecone. After validating the linearity and the reproducibility of this method, quantitative MALDI imaging was used to study the accumulation of chlordecone in the mouse liver. Our results revealed that normalized intensities measured by MALDI imaging could be first converted in quantitative units. These quantities appeared to be different from absolute quantities of chlordecone determined by gas chromatography (GC), but they were perfectly correlated (R(2) = 0.995). The equation of the corresponding correlation curve was thus efficiently used to convert quantities measured by MALDI imaging into absolute quantities. Our method combining labeled normalization and calibration with an orthogonal technique allowed the in situ absolute quantification of chlordecone by MALDI imaging. Finally, our results obtained on the pathological mouse liver illustrate the advantages of quantitative MALDI imaging which preserves information on in situ localization without radioactive labeling and with a simple sample preparation.
ISSN: 0003-2700

hal-01118103
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01118103
PUBMED : 24837422
DOI : 10.1021/ac500313s

Éditeur(s) : Nature Publishing Group
Résumé : Vibrio nigripulchritudo is an emerging pathogen of farmed shrimp in New Caledonia and other regions in the Indo-Pacific. The molecular determinants of V. nigripulchritudo pathogenicity are unknown; however, molecular epidemiological studies have suggested that pathogenicity is linked to particular lineages. Here, we performed high-throughput sequencing-based comparative genome analysis of 16 V. nigripulchritudo strains to explore the genomic diversity and evolutionary history of pathogen-containing lineages and to identify pathogen-specific genetic elements. Our phylogenetic analysis revealed three pathogen-containing V. nigripulchritudo clades, including two clades previously identified from New Caledonia and one novel clade comprising putatively pathogenic isolates from septicemic shrimp in Madagascar. The similar genetic distance between the three clades indicates that they have diverged from an ancestral population roughly at the same time and recombination analysis indicates that these genomes have, in the past, shared a common gene pool and exchanged genes. As each contemporary lineage is comprised of nearly identical strains, comparative genomics allowed differentiation of genetic elements specific to shrimp pathogenesis of varying severity. Notably, only a large plasmid present in all highly pathogenic (HP) strains encodes a toxin. Although less/non-pathogenic strains contain related plasmids, these are differentiated by a putative toxin locus. Expression of this gene by a non-pathogenic V. nigripulchritudo strain resulted in production of toxic culture supernatant, normally an exclusive feature of HP strains. Thus, this protein, here termed 'nigritoxin', is implicated to an extent that remains to be precisely determined in the toxicity of V. nigripulchritudo.
Isme Journal (1751-7362) (Nature Publishing Group), 2013-10 , Vol. 7 , N. 10 , P. 1985-1996

Droits : 2013 International Society for Microbial Ecology All rights reserved 1751-7362/13
http://archimer.ifremer.fr/doc/00160/27117/28369.pdf
DOI:10.1038/ismej.2013.90
http://archimer.ifremer.fr/doc/00160/27117/

Éditeur(s) : HAL CCSD American Society of Hematology
Résumé : International audience
Zika fever is an Aedes-borne disease caused by a flavivirus (Zika virus, ZIKV, genus Flavivirus). During the past years ZIKV spread in Polynesia, South-America and the Caribbean. Most ZIKV infections are asymptomatic or result in mild febrile disease with rash and conjunctivitis. Attention was recently drawn to non-vectored ZIKV transmission, including sexual, probable blood-borne and mother-to-fetus transmission, and to severe forms such as Guillain-Barré syndrome, acute neurological infections and fetal abnormalities (including microcephaly). Many aspects of Zika fever natural history remain unknown, e.g. the proportion of asymptomatic cases and the duration of viremia. Estimating the prevalence of Zika infections is difficult because a large proportion of infected individuals do not seek medical attention and seroprevalence studies are hampered by antigenic cross-reactivity with other flaviviruses, e.g. dengue virus. Here, we present a study of ZIKV infection in blooddonors from Martinique island (French West Indies, Caribbean region), with novel epidemiological, biological and clinical information that refine the picture of Zika fever in adults.
ISSN: 0006-4971

inserm-01415646
http://www.hal.inserm.fr/inserm-01415646
http://www.hal.inserm.fr/inserm-01415646/document
http://www.hal.inserm.fr/inserm-01415646/file/2016%2C%20Gallian%20et%20al%20-%20Zika%20virus%20in%20asymptomatic%20blood%20donors%2C%20Martinique%20%281%29.pdf
DOI : 10.1182/blood-2016-09-737981

Éditeur(s) : HAL CCSD Oxford University Press (OUP)
Résumé : International audience
To estimate the seismic hazard, the geometry (dip, length and orientation) and the dynamics (type of displacements and amplitude) of the faults in the area of interest need to be understood. In this paper, in addition to geomorphologic observations, we present the results of two ground penetrating radar (GPR) campaigns conducted in 2010 and 2011 along the Emeelt fault in the vicinity of Ulaanbaatar, capital of Mongolia, located in an intracontinental region with low deformation rate that induces long recurrence time between large earthquakes. As the geomorphology induced by the fault activity has been highly smoothed by erosion processes since the last event, the fault location and geometry is difficult to determine precisely. However, by using GPR first, a non-destructive and fast investigation, the fault and the sedimentary deposits near the surface can be characterized and the results can be used for the choice of trench location. GPR was performed with a 50 MHz antenna over 2-D lines and with a 500 MHz antenna for pseudo-3-D surveys. The 500 MHz GPR profiles show a good consistency with the trench observations, dug next to the pseudo-3-D surveys. The 3-D 500 MHz GPR imaging of a palaeochannel crossed by the fault allowed us to estimate its lateral displacement to be about 2 m. This is consistent with a right lateral strike-slip displacement induced by an earthquake around magnitude 7 or several around magnitude 6. The 2-D 50 MHz profiles, recorded perpendicular to the fault, show a strong reflection dipping to the NE, which corresponds to the fault plane. Those profiles provided complementary information on the fault such as its location at shallow depth, its dip angle (from 23 • to 35 •) and define its lateral extension. Central Asia is known for its high level of seismic hazards, especially Mongolia, which has been one of the most seismically active intracontinental regions in the world with four large earthquakes (magnitude around 8) along its active faults in the western part of the country during the last century (Khilko et al. 1985). The deformation in Mongolia is located between compressive structures related to the collision and penetration of the Indian plate into the Eurasian plate and extensive structures in the north of the country related with the Baykal rift (Tapponnier & Molnar 1979; Baljinnyam et al. 1993; Schlupp 1996; Bayasgalan & Jackson 1999). The seismic activity observed in the vicinity of Ulaanbaatar (UB), capital of Mongolia, is relatively low compared to the activity observed in western Mongolia. Nevertheless, since 2005, the seismic activity around UB not only has increased, but is also organized (see Fig. 1) at the west of UB along two perpendicular directions, which determine two active faults: Emeelt fault, discovered in 2008 (NNW-SSE direction, 25-km-long minimum and situated about 10 km W of UB) and Hustai fault (WSW–ENE direction, 80 km long, with its NE tip at less than 20 km west of UB); their length and morphology indicate that they can produce earthquakes of magnitude 6.5–7.5 (Schlupp et al. 2012). Most of the Mongolian population (1.2 million over 3 million) is concentrated at UB, which is the main political and economical centre of the country. Hence, the study of seismic hazard and the estimation of the probability of future destructive earthquakes are of primary importance for the country (Dugarmaa et al. 2006). Since the last large earthquake, the faults geomorphology has been highly smoothed by erosional processes and the exact location of the fault plane surface rupture is thus hidden within a several metre wide strip. The GPR method has been proven to give good and useful results to characterize faults by identifying offsets of radar reflections (Malik et al. 2007; Christie et al. 2009; Yalçiner et al. 2013) and
ISSN: 0956-540X

hal-01342629
https://hal.archives-ouvertes.fr/hal-01342629
https://hal.archives-ouvertes.fr/hal-01342629/document
https://hal.archives-ouvertes.fr/hal-01342629/file/Dujardin_Bano_etal_Geoph.%20J.%20Int._2014_final.pdf
DOI : 10.1093/gji/ggu130

Éditeur(s) : HAL CCSD Nature Publishing Group
Résumé : International audience
Although coral reefs support the largest concentrations of marine biodiversity worldwide, the extent to which the global system of marine-protected areas (MPAs) represents individual species and the breadth of evolutionary history across the Tree of Life has never been quantified. Here we show that only 5.7% of scleractinian coral species and 21.7% of labrid fish species reach the minimum protection target of 10% of their geographic ranges within MPAs. We also estimate that the current global MPA system secures only 1.7% of the Tree of Life for corals, and 17.6% for fishes. Regionally, the Atlantic and Eastern Pacific show the greatest deficit of protection for corals while for fishes this deficit is located primarily in the Western Indian Ocean and in the Central Pacific. Our results call for a global coordinated expansion of current conservation efforts to fully secure the Tree of Life on coral reefs.
ISSN: 2041-1723

hal-01282920
https://hal-univ-perp.archives-ouvertes.fr/hal-01282920
https://hal-univ-perp.archives-ouvertes.fr/hal-01282920/document
https://hal-univ-perp.archives-ouvertes.fr/hal-01282920/file/ncomms10359.pdf
DOI : 10.1038/ncomms10359

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
The Eastern Hoggar is by far the least well known part of the Tuareg Shield. It is composed, from west to east, of the Aouzegueur, Edembo and Djanet Terranes. The Djanet Terrane is the easternmost Hoggar terrane and comprises a greenschist-facies clastic sedimentary sequence, the Djanet Group, intruded by granitoids. Laser ablation (LA-) ICP-MS U-Pb zircon ages of detrital zircons from these sediments yield a large range of ages similar to ages known in Central and Western Hoggar; the youngest is 590 +/- 10 Ma (2 sigma), which is the maximum age of deposition of the Djanet Croup. The Djanet Group is intruded by the Djanet Batholith (571 +/- 16 Ma), by high-level subcircular plutons such as the Tin Bedjane Pluton (568 +/- 5 Ma) and finally by the felsic Tin Amali Dyke Swarm (558 +/- 5 Ma), all ages being SHRIMP U-Pb zircon. The deposition and metamorphism of the Djanet Group thus occurred between 590 Ma (the age of the youngest detrital zircons analyzed in the Djanet Group) and c. 570 Ma (the age of intrusive granitoids). Nd T-DM two-stage model ages (1.30-2.03 Ga), initial Sr-87/Sr-86 ratios (0.7035-0.7095) and epsilon(Nd) (-3 to -11) of the three intrusive suites, all being high-K calc-alkaline in composition, indicate mainly an old, Rb-depleted continental source. Migmatization in the adjacent Edembo Terrane is dated at 568 +/- 4 Ma (U-Pb zircon SHRIMP age), contemporaneous with the intrusion of the Djanet plutons. Rocks and events in the Edembo and Djanet Terranes are all intracontinental. We propose that the Djanet Terrane lies on the boundary of a craton located to the north-east, that we defined here as the Murzuq craton. The existence of the Murzuq craton is supported by sedimentary and geophysical data. We suggest that the deformation of Eastern Hoggar occurred 575-555 Ma, due to the indentation of the Murzuq craton and has no link with the older convergence with the West African craton as was the case for the central and western parts of the Tuareg Shield. This determines a late Ediacaran intracontinental Murzukian event that probably also occurred to the east in the Tibesti area.
ISSN: 0301-9268

hal-00512833
https://hal.archives-ouvertes.fr/hal-00512833
DOI : 10.1016/j.precamres.2010.05.011

Résumé : Les mattes de procaryotes constituent une niche écologique diversifiée. peu étudié!<..en mangrove et jamais décrjte dans les Antilles. L'objectif de cette thèse est de décrire les procaryotes filamenteux reposant sur le sédiment marin et de caractériser les interactions entre la matte, milieu et entre les différents micro-organismes. Nous avons d'abord caractérisé les micro-organismes majoritaires de la matte par le séquençage de l'ADNr 16S et des hybridations moléculaires (FISH). Il a ainsi été possible de décrire deux nouvelles espèces de Beggiatoaceae dont la structure a été étudiée par microscopie électronique. De plus, afin de caractériser l'environnement chimique de ces bactéries, des capteurs potentiométriques ont été utilisés. Ils ont permis de démontrer que les Beggiaotaceae oxydaient les sulfures en prélevant l'oxygène du milieu, tandis que des analyses de microscopie couplées à de l'EDX ont mis en évidence des réserves de soufre intracellulaires dans ces bactéries. Le séquençage de l'ADNr 16S des cyanobactéries filamenteuses a mis en évidence quatre nouvelles espèces de l'ord~e des Oscillatoriales. Deux d'entre elles, du genre Planktothricoides ont révélé une toxicité positive sur les Artemia sp:, les deux autres ont été identifiées comme proches d'Oscillatoria spongeliae, une espèce symbiotique d'éponge, bien que les coupes uItrafines d'une de ces souches aient montré une morphologie interne proche des Tychonema. L'analyse des données a permis d'étoffer les connaissances sur les communautés microbiennes de mangrove et constitue une base intéressante de travail sur la contribution des micro-organismes au fonctionnement de l'écosystème mangrove dans son ensemble
Procaryotic mats are ecological niches, occuring in many ecosystems. Those structures are little studied in marine mangrove sediment and have never been described in West Indies. The purpose ofthis thesis is to characterize the interactions between the mat and the environment, and between the different filamentous micro-organisms living into the mat. In a first place, we characterized the mainly micro-organisrns of the mat by sequencing 16S rDNA. We confirmed these sequences by molecular hybridization (FISH) with specific probes designed from sequences obtained. Thus, it was possible to describe two new Beggiatoaceae strains, whose structure has been studied by electronic microscopy. Furthemore, we used potentiometric captors in situ and in laboratory, by creating a mesocosm, in order to define the chemical environment where involved these bacteria. These experiences proved that the Beggiatoaceae of the mat oxidized the sulfur taking the oxygen from the medium, while the microscopic analysis coupled with EDX showed intracellular sulfur granules into the bacteria. The study of the filamentous cyanobacteria of the mat highlighted four new cyanobacteria strains, all studied by electronic rmcroscopy. Two of them belongs to Planktothrlcoides genus and showed positive toxicity on Artemia salina. The others species are close to Oscillatorla spongeliae, a sponge symbiont, nevertheless, one ofthem showed an intemal morphology close to Tychonema. The analysis of the different results adduces sorne knowledge about mangrove microbial communities. Furthermore, this study can be used as an interesting base to study the micro-organisms contribution in functioning mangrove ecosystem

http://www.theses.fr/2013AGUY0614/document

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
We sought transversotrematid trematodes from French Polynesian fishes by examining 304 individual scaled fishes of 53 species from seven families known to harbour the family elsewhere. A single species was found at two locations in the Tuamotus Archipelago on two species of Chaetodontidae (Chaetodon auriga and Chaetodon ephippium) and one species of Lutjanidae (Lutjanus gibbus). The species closely resembles Transversotrema borboleta Hunter & Cribb, 2012 from chaetodontids and lutjanids of the northern Great Barrier Reef (GBR) but differs from it consistently in 8 base positions of ITS2 rDNA. This level of variation exceeds that between some clearly morphologically distinct pairs of species of Transversotrema and the form from French Polynesia is thus interpreted as a distinct, though cryptic, species and named Transversotrema polynesiae n. sp. The new species forms part of a complex of species, here characterised as the T. borboleta complex, associated with chaetodontids and lutjanids in the tropical Indo-West Pacific. Most of the putative species within this complex are yet to be described. Comparison of identical numbers of matched samples of fishes from French Polynesia, Heron Island (southern GBR) and Lizard Island (northern GBR) revealed 1, 4 and 10 species of Transversotrema respectively suggesting that the French Polynesian fauna is depauperate for this family. In addition to those species apparently missing from suitable hosts in French Polynesia, several species from further west infect fishes (especially Nemipteridae) that are themselves absent from French Polynesia. This dramatic east–west decline in richness contrasts strongly with what is known for monogeneans, which appear to maintain their richness over the same scale, and is more precipitate than is known for other groups of trematodes. The decline might be explained in part by the absence of the as yet unknown first intermediate hosts in French Polynesia. However, we predict that it is explained by other life cycle traits. We hypothesise that the characters of large short-lived cercariae, short-lived miracidia, the absence in the life-cycle of second intermediate hosts that are capable of transporting the species, and definitive and first intermediate hosts that have limited vagility combine to give marine Transversotrematidae limited dispersal capacity and a propensity for localised speciation.
ISSN: 1383-5769

hal-01333467
https://hal-univ-perp.archives-ouvertes.fr/hal-01333467
DOI : 10.1016/j.parint.2013.11.009

Éditeur(s) : Elsevier
Résumé : This paper examines the fishing of blackfin tuna (Thunnus atlanticus) around Fish Aggregating Devices (FADs) in Martinique (French West Indies). It is based on the compared analysis of catches from monthly experimental fishing surveys and sampling of commercial landings. The data collected in these two different ways allowed comparison of blackfin tuna length frequencies. A large part of the commercial landings were made up of young immature tuna with a fork length of less than 40 cm, whereas the experimental longline catches were mainly made up of fish with a fork length ranging between 55 and 75 cm. We give evidence that these discrepancies were mostly due to the fishing technique used. Indeed, contrarily to the experimental surveys, Martinican fishermen only fish during daytime and usually on the surface by trolling. This way, fishermen do not have access to the largest fish, which are found deeper. Out results suggested that a new fishing technique such as vertical longlining, could improve commercial catches of big blackfin tuna under FADs. (C) 2000 Ifremer/CNRS/INRA/IRD/Cemagerf/Editions scientifiques et medicales Elsevier SAS.
Aquatic Living Resources (0990-7440) (Elsevier), 2000-07 , Vol. 13 , N. 4 , P. 259-262

Droits : 2000 Ifremer/CNRS/INRA/IRD/Cemagref/Éditions scientifiques et médicales Elsevier SAS
http://archimer.ifremer.fr/doc/2000/publication-1392.pdf
DOI:10.1016/S0990-7440(00)01056-1
http://archimer.ifremer.fr/doc/00000/1392/