Éditeur(s) : HAL CCSD Society for Range Management
Résumé : Grasslands and agroecosystems occupy one-third of the terrestrial area, but their contribution to the global carbon cycle remains uncertain. We used a set of 316 site-years of CO(2) exchange measurements to quantify gross primary productivity, respiration, and light-response parameters of grasslands, shrublands/savanna, wetlands, and cropland ecosystems worldwide. We analyzed data from 72 global flux-tower sites partitioned into gross photosynthesis and ecosystem respiration with the use of the light-response method (Gilmanov, T. G., D. A. Johnson, and N. Z. Saliendra. 2003. Growing season CO(2) fluxes in a sagebrushsteppe ecosystem in Idaho: Bowen ratio/energy balance measurements and modeling. Basic and Applied Ecology 4:167-183) from the RANGEFLUX and WORLDGRASSAGRIFLUX data sets supplemented by 46 sites from the FLUXNET La Thuile data set partitioned with the use of the temperature-response method (Reichstein, M., E. Falge, D. Baldocchi, D. Papale, R. Valentini, M. Aubinet, P. Berbigier, C. Bernhofer, N. Buchmann, M. Falk, T. Gilmanov, A. Granier, T. Grunwald, K. Havrankova, D. Janous, A. Knohl, T. Laurela, A. Lohila, D. Loustau, G. Matteucci, T. Meyers, F. Miglietta, J.M. Ourcival, D. Perrin, J. Pumpanen, S. Rambal, E. Rotenberg, M. Sanz, J. Tenhunen, G. Seufert, F. Vaccari, T. Vesala, and D. Yakir. 2005. On the separation of net ecosystem exchange into assimilation and ecosystem respiration: review and improved algorithm. Global Change Biology 11: 1.424-1439). Maximum values of the quantum yield (alpha = 75 mmol.mol(-1)), photosynthetic capacity (A(max) = 3.4 mg CO(2) . m(-2).s-1), gross photosynthesis (P(g,max) = 1.16 g CO(2) . m(-2).d(-1)), and ecological light-use efficiency (epsilon(ecol) = 59 mmol . mol(-1)) of managed grasslands and high-production croplands exceeded those of most forest ecosystems, indicating the potential of nonforest ecosystems for uptake of atmospheric CO(2). Maximum values of gross primary production (8 600 g CO(2) . m(-2).yr(-1)), total ecosystem respiration (7 900 g CO(2) . m(-2).yr(-1)), and net CO(2) exchange (2 400 g CO(2) . m(-2).yr(-1)) were observed for intensively managed grasslands and high-yield crops, and are comparable to or higher than those for forest ecosystems, excluding some tropical forests. On average, 80% of the nonforest sites were apparent sinks for atmospheric CO(2), with mean net uptake of 700 g CO(2) . m(-2).yr(-1) for intensive grasslands and 933 g CO(2) . m(-2).d(-1) for croplands. However, part of these apparent sinks is accumulated in crops and forage, which are carbon pools that are harvested, transported, and decomposed off site. Therefore, although agricultural fields may be predominantly sinks for atmospheric CO(2), this does not imply that they are necessarily increasing their carbon stock.
ISSN: 1550-7424

hal-01190754
https://hal.archives-ouvertes.fr/hal-01190754
DOI : 10.2111/rem-d-09-00072.1
PRODINRA : 214043

Éditeur(s) : HAL CCSD Springer-Verlag
Résumé : International audience
With hull-mounted multibeam echosounder data, wereport for the first time along the active Ecuadorian margin,acoustic signatures of water column fluid emissions and seep-relatedstructures on the seafloor. In total 17 flare-shaped acousticanomalies were detected from the upper slope (1250 m) to the shelfbreak (140 m). Nearly half of the flare-shaped acoustic anomaliesrise 200–500 m above the seafloor. The base of the flares is generallyassociated with high-reflectivity backscatter patchescontrasting with the neighboring seafloor. We interpret these flaresas caused by fluid escape in the water column, most likely gases.High-resolution seismic profiles show that most flares occur closeto the surface expression of active faults, deformed areas, slopeinstabilities or diapiric structures. In two areas tectonic deformationdisrupts a Bottom Simulating Reflector (BSR), suggesting thatburied frozen gas hydrates are destabilized, thus supplying free gasemissions and related flares. This discovery is important as it opensthe way to determine the nature and origin of the emitted fluids andtheir potential link with the hydrocarbon system of the forearcbasins along the Ecuadorian margin.
ISSN: 0033-4533

insu-01267238
https://hal-insu.archives-ouvertes.fr/insu-01267238
DOI : 10.1007/s00024-015-1230-7

Éditeur(s) : HAL CCSD Oxford University Press (OUP): Policy B
Résumé : International audience
AIMS: Indications for surgery in acute infective endocarditis (IE) are detailed in guidelines, but their application is not well known. We analysed the agreement between the patient's attending physicians and European Society of Cardiology guidelines regarding indications for surgery. We also assessed whether surgery was performed in patients who had an indication. METHODS AND RESULTS: From the 2008 prospective population-based French survey on IE, 303 patients with definite left-sided native IE were identified. For each case, we prospectively recorded (i) indication for surgery according to the attending physicians and (ii) indication for surgery according to guidelines. Surgery was indicated in 194 (65%) patients according to attending physicians and in 221 (73%) according to guidelines, while 139 (46%) underwent surgery. Agreement was moderate between attending physicians and guidelines (kappa 0.41-0.59) and between indication according to guidelines and the performance of surgery (kappa 0.38). Of the 90 (30%) patients not operated despite indication, contraindication to surgery was reported by the attending physicians in 42 (47%), and indication was not identified in 48 (53%). One-year survival was 76% in patients with indication and surgery performed (n = 131), 69% in patients without indication and no surgery (n = 74), 56% in patients with identified indication and contraindication to surgery (n = 42), and 60% in patients with no identified indication (n = 48; P = 0.059). CONCLUSION: Cardiac surgery during acute IE was recommended in almost three out of four patients, although fewer than half were actually operated. Indication was not acknowledged by the attending physicians in one out of six patients
ISSN: 0195-668X

hal-01255874
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01255874
DOI : 10.1093/eurheartj/ehv650
PUBMED : 26685134

Éditeur(s) : HAL CCSD Pôle de Recherche pour l'Organisation et la diffusion de l'Information Géographique
Résumé : International audience
The Amazon has recently experienced a dramatic decline in deforestation coupled with economic development. However, this process is uneven. While large and medium-sized producers are intensifying and diversifying their production systems in the already cleared areas, thus apparently abandoning expansion strategies at the moment, family farming remains aloof from this decoupling between production and deforestation. In this article, the commitments of public authorities and sectors, their effects on deforestation and inequalities of adaptation are analyzed at the scale of the Legal Amazon and in a municipality considered as a model because involved in a Município Verde initiative: Paragominas, in the Eastern Amazon.
L’Amazonie a amorcé depuis quelques années une baisse de la déforestation couplée à un développement économique. Le processus est cependant inégal. Si les grands et moyens producteurs font évoluer leurs systèmes de production vers l’intensification et la diversification dans les espaces déjà ouverts, délaissant en apparence les stratégies d’expansion, l’agriculture familiale reste à l’écart du découplage entre production et déforestation. Dans cet article, les engagements des pouvoirs publics et des filières, leurs effets en matière de déforestation et les inégalités d’adaptation sont analysés à l’échelle de l’Amazonie Légale et à celle d’une municipalité considérée comme un modèle car à l’initiative d’une démarche de Município Verde : Paragominas, en Amazonie orientale.
ISSN: 1963-1197

halshs-01609039
https://halshs.archives-ouvertes.fr/halshs-01609039
DOI : 10.4000/echogeo.15035

Éditeur(s) : HAL CCSD Oxford University Press
Résumé : International audience
The BioMart Community Portal (www.biomart.org) is a community-driven effort to provide a unified interface to biomedical databases that are distributed worldwide. The portal provides access to numerous database projects supported by 30 scientific organizations. It includes over 800 different biological datasets spanning genomics, proteomics, model organisms, cancer data, ontology information and more. All resources available through the portal are independently administered and funded by their host organizations. The BioMart data federation technology provides a unified interface to all the available data. The latest version of the portal comes with many new databases that have been created by our ever-growing community. It also comes with better support and extensibility for data analysis and visualization tools. A new addition to our toolbox, the enrichment analysis tool is now accessible through graphical and web service interface. The BioMart community portal averages over one million requests per day. Building on this level of service and the wealth of information that has become available, the BioMart Community Portal has introduced a new, more scalable and cheaper alternative to the large data stores maintained by specialized organizations.
ISSN: 0305-1048

hal-01146849
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01146849
DOI : 10.1093/nar/gkv350
PUBMED : 25897122

Éditeur(s) : HAL CCSD Météo et Climat
Résumé : International audience
Les risques hydrométéorologiques sont au coeur du programme de recherche HyMeX sur le cycle de l'eau en Méditerranée. HyMeX a pour ambition d'améliorer leur prévision, de mieux connaître leur variabilité à l'échelle pluriannuelle et de renseigner sur leur évolution, dans le contexte du changement climatique. À cette fin, deux campagnes de mesures dédiées à ces événements extrêmes (SOP1 : pluies intenses et crues rapides ; SOP2 : vents forts et formation d'eaux denses) sont organisées en Méditerranée nord-occidentale, entre septembre 2012 et mars 2013.
ISSN: 0026-1181

hal-00829760
https://hal.archives-ouvertes.fr/hal-00829760
DOI : 10.4267/2042/48793

Éditeur(s) : HAL CCSD Taylor & Francis
Résumé : International audience
To analyze the characteristics and outcome of infective endocarditis (IE) according to the time interval between IE first symptoms and diagnosis.
Among the IE cases of a French population-based epidemiological survey, patients having early-diagnosed IE (diagnosis of IE within 1 month of first symptoms) were compared with those having late-diagnosed IE (diagnosis of IE more than 1 month after first symptoms).
Among the 486 definite-IE, 124 (25%) had late-diagnosed IE whereas others had early-diagnosed IE. Early-diagnosed IE were independently associated with female gender (OR = 1.8; 95% CI [1.0-3.0]), prosthetic valve (OR= 2.6; 95% CI [1.4-5.0]) and staphylococci as causative pathogen (OR = 3.7; 95% CI [2.2-6.2]). Cardiac surgery theoretical indication rates were not different between early and late-diagnosed IE (56.3% vs 58.9%), whereas valve surgery performance was lower in early-diagnosed IE (41% vs 53%; p = .03). In-hospital mortality rates were higher in early-diagnosed IE than in late-diagnosed IE (25.1% vs 16.1%; p < .001).
The time interval between IE first symptoms and diagnosis is closely related to the IE clinical presentation, patient characteristics and causative microorganism. Better prognosis reported in late-diagnosed IE may be related to a higher rate of valvular surgery. KEY MESSAGES Infective endocarditis, which time interval between first symptoms and diagnosis was less than one month, were mainly due to Staphylococcus aureus in France. Staphylococcus aureus infective endocarditis were associated with septic shock, transient ischemic attack or stroke and higher mortality rates than infective endocarditis due to other bacteria or infective endocarditis, which time interval between first symptoms and diagnosis was more than one month. Infective endocarditis, which time interval between first symptoms and diagnosis was more than one month, were accounting for one quarter of all infective endocarditis in our study and were associated with vertebral osteomyelitis and a higher rate of cardiac surgery performed for hemodynamic indication than other infective endocarditis.
ISSN: 0785-3890

hal-01509563
https://hal.archives-ouvertes.fr/hal-01509563
PUBMED : 27607562

Éditeur(s) : HAL CCSD AGU and the Geochemical Society
Résumé : International audience
Continental rifts and passive continental margins show fundamental along-axis segmentation patterns that have been attributed to one or a number of different processes: extensional fault geometry, variable stretching along strike, preexisting lithospheric compositional and structural heterogeneities, oblique rifting, and the presence or absence of eruptive volcanic centers. The length and width scales of the rift stage fault-bounded basin systems change during the late evolution of the new plate boundary, and the role of magmatism may increase as rifting progresses to continental rupture. Along obliquely spreading ridges, first-order mid-ocean ridge geometries originate during the synrift stage, indicating an intimate relationship between magma production and transform fault spacing and location. The Gulf of Aden rift is a young ocean basin in which the earliest synrift to breakup structures are well exposed onshore and covered by thin sediment layers offshore. This obliquely spreading rift is considered magma-poor and has several large-offset transforms that originated during late stage rifting and control the first-order axial segmentation of the spreading ridge. Widely spaced geophysical transects of passive margins that produce only isolated 2-D images of crust and uppermost mantle structure are inadequate for evaluation of competing rift evolution models. Using closely spaced new geophysical and geological observations from the Gulf of Aden we show that rift sectors between transforms have a large internal variability over short distances (∼10 km): the ocean-continent transition (OCT) evolves from a narrow magmatic transition to wider zones where continental mantle is probably exhumed. We suggest that this small-scale variability may be explained (1) by the distribution of volcanism and (2) by the along-strike differences in time-averaged extension rate of the oblique rift system. The volcanism may be associated with (1) the long-offset Alula-Fartak Fracture Zone, which may enhance magma production on its younger side, or (2) channeled flow from the Afar plume material along the newly formed OCT and the spreading ridge. Oblique extension and/or hot spot interactions may thereby have a significant control on the styles of rifting and continental breakup and on the evolution of many magma-poor margins.
ISSN: 1525-2027

hal-00504866
https://hal.archives-ouvertes.fr/hal-00504866
https://hal.archives-ouvertes.fr/hal-00504866/document
https://hal.archives-ouvertes.fr/hal-00504866/file/G3-Leroy_al-2010.pdf
DOI : 10.1029/2009GC002963

Éditeur(s) : HAL CCSD
Résumé : International audience
Sedimentary basins, through the sedimentary successions and the nature of the deposits, reflect the geology of thearea from which the sediments were derived and thus provide valuable record of hinterland tectonism. As the collisionbetween the South China and the Indochina blocks (i.e. the Indosinian orogeny) is still the object of a numberof controversies regarding, for instance, its timing and the polarity of the subduction, the sedimentary basins associatedwith this mountain belt are likely to provide clues to reconstruct its geodynamic evolution. However, boththe Sam Nua Basin (located to the south of the inner zones of the Indosinian orogeny and the Song Ma ophiolites)and the Song Da Basin (located to the north of the inner zones), northern Vietnam, are still lacking importantinformation regarding the depositional environments and the ages of the main formations that they contain.Using sedimentological and dating analyses (foraminifers biostratigraphy and U-Pb dating on detrital zircon), weprovide a new stratigraphic framework for these basins and propose a geodynamic evolution of the present-daynorthern Vietnam.During the Early Triassic, the Sam Nua Basin was mainly supplied by volcaniclastic sediments originating froman active volcanic activity. Geochemical investigations, combined with sedimentological and structural analyses,support an arc-related setting for this magmatism. This magmatic arc resulted from the subduction of a south dippingoceanic slab that once separated the South China from the Indochina blocks. During the Middle to the LateTriassic, the Sam Nua Basin underwent erosion that lead to the formation of a major unconformity, termed theIndosinian unconformity. This unconformity is interpreted to result from the erosion of the Indosinian mountainbelt, built after the continental collision between the South China and the Indochina blocks. Later, during the LateTriassic, the Sam Nua Basin experienced the deposition of very coarse material, emplaced under continental settingand representing the product of the erosion of the Indosinian mountain belt.To the North, the Song Da Basin is characterized by strongly diachronous deposits over a basal unconformitydeveloped at the expense of volcanic and volcaniclastic deposits related to the Emeishan Large Igneous Province.The sedimentary succession indicates a foreland setting during the Early to the Middle Triassic, which contrastswith the commonly assumed rift setting for these sediments. Thus, the Song Da Basin documents the formation ofthe Indosinian thrust belt, located immediately to the South of the basin.
European Geosciences Union General Assembly 2017
Vienne, Austria

insu-01510331
https://hal-insu.archives-ouvertes.fr/insu-01510331