Éditeur(s) : Université des Antilles et de la Guyane. Service commun de la documentation Université des Antilles et de la Guyane. Service commun de la documentation
Extrait de : Les rencontres culturelles de la BU 2014-2015. Université des Antilles
Description : "Les arts, les lieux, le rapport à l'autre...La rencontre est de tous les champs et de tous les instants, matière plurielle par excellence, "tout autant associée à l'éblouissement, à l'enthousiasme, au vertige qu'au désastre, à la catastrophe, au drame", selon le professeur Dominique Berthet, qui a fait de cette thématique l'un des axes forts de ses travaux de recherche. Cette manifestation a été l'occasion d'une rencontre des arts sous la forme d'une performance pluri-artistique intitulée "DéamBUlation". Autour de la question de l'accès au savoir (obstacles, embûches, promesses d'élévation), Jean-Hugues Miredin et Laurent Troudart (Cie Art&Fact), Yna Boulangé, Fred Lagnau, Michel Beroard et David Gumbs ont associé leurs talents créatifs de danseurs, comédienne, pianiste, plasticien et artiste du numérique en déambulant dans la Bibliothèque universitaire, mettant ainsi en exergue les formes, les symboles et les différents modes d'appropriation de ce lieu de toutes les cultures. La performance est suivie d'une communication de Dominique Berthet, auteur des textes lus par Yna Boulangé."
Siècle(s) traité(s) : 21
Droits : CC-BY-NC-ND - Attribution - Pas d'utilisation commerciale - Pas de modification
Permalien : http://www.manioc.org/fichiers/V15180
V15180
V15180

Éditeur(s) : HAL CCSD Landes Bioscience
Résumé : International audience
In 2008 we published the first set of guidelines for standardizing research in autophagy. Since then, research on this topic has continued to accelerate, and many new scientists have entered the field. Our knowledge base and relevant new technologies have also been expanding. Accordingly, it is important to update these guidelines for monitoring autophagy in different organisms. Various reviews have described the range of assays that have been used for this purpose. Nevertheless, there continues to be confusion regarding acceptable methods to measure autophagy, especially in multicellular eukaryotes. A key point that needs to be emphasized is that there is a difference between measurements that monitor the numbers or volume of autophagic elements (e.g., autophagosomes or autolysosomes) at any stage of the autophagic process vs. those that measure flux through the autophagy pathway (i.e., the complete process); thus, a block in macroautophagy that results in autophagosome accumulation needs to be differentiated from stimuli that result in increased autophagic activity, defined as increased autophagy induction coupled with increased delivery to, and degradation within, lysosomes (in most higher eukaryotes and some protists such as Dictyostelium) or the vacuole (in plants and fungi). In other words, it is especially important that investigators new to the field understand that the appearance of more autophagosomes does not necessarily equate with more autophagy. In fact, in many cases, autophagosomes accumulate because of a block in trafficking to lysosomes without a concomitant change in autophagosome biogenesis, whereas an increase in autolysosomes may reflect a reduction in degradative activity. Here, we present a set of guidelines for the selection and interpretation of methods for use by investigators who aim to examine macroautophagy and related processes, as well as for reviewers who need to provide realistic and reasonable critiques of papers that are focused on these processes. These guidelines are not meant to be a formulaic set of rules, because the appropriate assays depend in part on the question being asked and the system being used. In addition, we emphasize that no individual assay is guaranteed to be the most appropriate one in every situation, and we strongly recommend the use of multiple assays to monitor autophagy. In these guidelines, we consider these various methods of assessing autophagy and what information can, or cannot, be obtained from them. Finally, by discussing the merits and limits of particular autophagy assays, we hope to encourage technical innovation in the field.
Autophagy

hal-00735751
https://hal.archives-ouvertes.fr/hal-00735751
PUBMED : 22966490

Éditeur(s) : HAL CCSD BioMed Central
Résumé : International audience
Background: HCV treatment uptake has drastically increased in HIV-HCV coinfected patients in France since direct-acting antiviral (DAA) treatment approval, resulting in HCV cure in 63% of all HIV-HCV patients by the end of 2015. We investigated the impact of scaling-up DAA on HCV prevalence in the whole HIV population and in various risk groups over the next 10 years in France using a transmission dynamic compartmental model.Methods: The model was based on epidemiological data from the French Dat’AIDS cohort. Eight risk groups wereconsidered, including high-risk (HR) and low-risk (LR) men who have sex with men (MSM) and male/female heterosexuals,intra-venous drug users, or patients from other risk groups. The model was calibrated on prevalence and incidence dataobserved in the cohort between 2012 and 2015.Results: On January 1, 2016, 156,811 patients were registered as infected with HIV in France (24,900 undiagnosedpatients) of whom 7938 (5.1%) had detectable HCV-RNA (722 undiagnosed patients). Assuming a treatmentcoverage (TC) rate of 30%/year (i.e., the observed rate in 2015), model projections showed that HCV prevalenceamong HIV patients is expected to drop to 0.81% in 2026. Sub-analyses showed a similar decrease of HIV-HCVprevalence in most risk groups, including LR MSM. Due to higher infection and reinfection rates, predicted prevalencein HR MSM remained stable from 6.96% in 2016 to 6.34% in 2026. Increasing annual TC rate in HR MSM to 50/70%would decrease HCV prevalence in this group to 2.35/1.25% in 2026. With a 30% TC rate, undiagnosed patients wouldaccount for 34% of HCV infections in 2026.Conclusions: Our model suggests that DAA could nearly eliminate coinfection in France within 10 years for most riskgroups, including LR MSM. Elimination in HR MSM will require increased TC.
ISSN: 1741-7015

Droits : info:eu-repo/semantics/OpenAccess
inserm-01685739
http://www.hal.inserm.fr/inserm-01685739
http://www.hal.inserm.fr/inserm-01685739/document
http://www.hal.inserm.fr/inserm-01685739/file/2017%2C%20Virlogeux%20-%20Modeling%20HIV-HCV%20coinfection.pdf
DOI : 10.1186/s12916-017-0979-1

Éditeur(s) : HAL CCSD Wiley
Résumé : International audience
Aim To examine variation in the phylogenetic diversity (PD) of tree communities across geographical and environmental gradients in Amazonia.Location Two hundred and eighty-three c.1ha forest inventory plots from across Amazonia.Methods We evaluated PD as the total phylogenetic branch length across species in each plot (PDss), the mean pairwise phylogenetic distance between species (MPD), the mean nearest taxon distance (MNTD) and their equivalents standardized for species richness (ses.PDss, ses.MPD, ses.MNTD). We compared PD of tree communities growing (1) on substrates of varying geological age; and (2) in environments with varying ecophysiological barriers to growth and survival.Results PDss is strongly positively correlated with species richness (SR), whereas MNTD has a negative correlation. Communities on geologically young- and intermediate-aged substrates (western and central Amazonia respectively) have the highest SR, and therefore the highest PDss and the lowest MNTD. We find that the youngest and oldest substrates (the latter on the Brazilian and Guiana Shields) have the highest ses.PDss and ses.MNTD. MPD and ses.MPD are strongly correlated with how evenly taxa are distributed among the three principal angiosperm clades and are both highest in western Amazonia. Meanwhile, seasonally dry tropical forest (SDTF) and forests on white sands have low PD, as evaluated by any metric.Main conclusions High ses.PDss and ses.MNTD reflect greater lineage diversity in communities. We suggest that high ses.PDss and ses.MNTD in western Amazonia results from its favourable, easy-to-colonize environment, whereas high values in the Brazilian and Guianan Shields may be due to accumulation of lineages over a longer period of time. White-sand forests and SDTF are dominated by close relatives from fewer lineages, perhaps reflecting ecophysiological barriers that are difficult to surmount evolutionarily. Because MPD and ses.MPD do not reflect lineage diversity per se, we suggest that PDss, ses.PDss and ses.MNTD may be the most useful diversity metrics for setting large-scale conservation priorities.
ISSN: 1366-9516

hal-01557462
https://hal.univ-lorraine.fr/hal-01557462
DOI : 10.1111/ddi.12357

Éditeur(s) : HAL CCSD Nature Publishing Group
Résumé : While Amazonian forests are extraordinarily diverse, the abundance of trees is skewed strongly towards relatively few 'hyperdominant' species. In addition to their diversity, Amazonian trees are a key component of the global carbon cycle, assimilating and storing more carbon than any other ecosystem on Earth. Here we ask, using a unique data set of 530 forest plots, if the functions of storing and producing woody carbon are concentrated in a small number of tree species, whether the most abundant species also dominate carbon cycling, and whether dominant species are characterized by specific functional traits. We find that dominance of forest function is even more concentrated in a few species than is dominance of tree abundance, with only ≈1% of Amazon tree species responsible for 50% of carbon storage and productivity. Although those species that contribute most to biomass and productivity are often abundant, species maximum size is also influential, while the identity and ranking of dominant species varies by function and by region.
ISSN: 2041-1723

hal-01204225
https://hal.archives-ouvertes.fr/hal-01204225
DOI : 10.1038/ncomms7857
PRODINRA : 305614
PUBMED : 25919449

Éditeur(s) : HAL CCSD Pacific-credo Publications
Résumé : International audience
Les sciences humaines et sociales dans le Pacifique Sud, terrain questions et méthodes

ISBN : 978-2-9537485-2-9
hal-01342961
https://hal-univ-perp.archives-ouvertes.fr/hal-01342961

Éditeur(s) : HAL CCSD American Association for the Advancement of Science
Résumé :  
Amazon forests are a key but poorly understood component of the global carbon cycle. If, as anticipated, they dry this century, they might accelerate climate change through carbon losses and changed surface energy balances. We used records from multiple long-term monitoring plots across Amazonia to assess forest responses to the intense 2005 drought, a possible analog of future events. Affected forest lost biomass, reversing a large long-term carbon sink, with the greatest impacts observed where the dry season was unusually intense. Relative to pre-2005 conditions, forest subjected to a 100-millimeter increase in water deficit lost 5.3 megagrams of aboveground biomass of carbon per hectare. The drought had a total biomass carbon impact of 1.2 to 1.6 petagrams (1.2 × 1015 to 1.6 × 1015 grams). Amazon forests therefore appear vulnerable to increasing moisture stress, with the potential for large carbon losses to exert feedback on climate change.
ISSN: 0036-8075

hal-01032111
https://hal.archives-ouvertes.fr/hal-01032111
DOI : 10.1126/science.1164033

Éditeur(s) : HAL CCSD Inter-Research
Résumé : Precise knowledge of lifetime migrations is vital in exploited fish species, since all essential habitats must be protected to maintain sustainable stock levels. The present study used multi-element otolith fingerprints of the gilthead sea bream Sparus aurata (L.) to discriminate its main juvenile and adult habitats in the Languedoc-Roussillon region (Gulf of Lions, northwest Mediterranean) and infer the lifetime migrations of 12 individuals from the area (11 from the present day and 1 from the Roman era). This allowed for the first time the identification of key habitats for the successful completion of the species' life cycle in the Gulf of Lions, and the connectivity between them. Our results revealed that lagoon use by S. aurata is probably ancient (>2500 yr) and confirmed its current commonness. Yet, although most observed migration patterns were in accordance with the migratory behavior previously described for the species, strong inter-individual variations and new patterns in habitat use were detected. At the juvenile stage, a preference for shallow lagoons with low salinities was evidenced. Nevertheless, the first year of life can also be successfully completed in marine conditions. At the adult stage, lagoon use was shown to occur until at least age 4 yr, with periods of lagoon residency of up to 11 mo in a year, often including winter months. Because overwintering in the lagoons was previously thought to be impossible for S. aurata due to low temperatures, this finding has important implications for future stock management, especially since the species breeds in winter.
Marine Ecology Progress Series

hal-00682003
https://hal.archives-ouvertes.fr/hal-00682003
DOI : 10.3354/meps09444

Éditeur(s) : Pergamon-elsevier Science Ltd
Résumé : In the present work, a biophysical dispersal model is used to understand the role of the physical environment in determining reef fish larval dispersal patterns in the South-West Lagoon of New Caledonia. We focus on a reef fish species, the humbug damselfish Dascyllus aruanus, to investigate seasonal variability of simulated larval retention at the scale of a reef patch and at the scale of the lagoon, and to explore links between larval retention and wind variability. The model shows that retention exhibits considerable temporal variability and periodically reaches values much larger than anticipated. Non-zero larval settlement occurs over a large part of the lagoon. Nevertheless, settlement values decrease quickly away from the natal reef and mean dispersal distances are of order 25-35 km. Cross-correlation analyses indicate that weather conditions characterized by strong south east trade winds lead to low retention rates at both local (reef) and regional (lagoon) scales. By contrast, subtropical weather conditions characterized by weak winds result in high retention rates. These results suggest that large-scale weather regimes can be used as proxies for larval retention of the humbug damselfish in the South-West Lagoon of New Caledonia. Nevertheless, relatively small mean dispersal distances suggest that meta-population dynamics occur on relatively small spatial scales.
Progress In Oceanography (0079-6611) (Pergamon-elsevier Science Ltd), 2014-03 , Vol. 122 , P. 105-115

Droits : 2013 Elsevier Ltd. All rights reserved.
http://archimer.ifremer.fr/doc/00170/28115/26326.pdf
DOI:10.1016/j.pocean.2013.12.006
http://archimer.ifremer.fr/doc/00170/28115/

Éditeur(s) : Oxford Univ Press
Résumé : The interrogation of genetic markers in environmental meta-barcoding studies is currently seriously hindered by the lack of taxonomically curated reference data sets for the targeted genes. The Protist Ribosomal Reference database (PR2, http://ssurrna. org/) provides a unique access to eukaryotic small sub-unit (SSU) ribosomal RNA and DNA sequences, with curated taxonomy. The database mainly consists of nuclear-encoded protistan sequences. However, metazoans, land plants, macrosporic fungi and eukaryotic organelles (mitochondrion, plastid and others) are also included because they are useful for the analysis of hightroughput sequencing data sets. Introns and putative chimeric sequences have been also carefully checked. Taxonomic assignation of sequences consists of eight unique taxonomic fields. In total, 136 866 sequences are nuclear encoded, 45 708 (36 501 mitochondrial and 9657 chloroplastic) are from organelles, the remaining being putative chimeric sequences. The website allows the users to download sequences from the entire and partial databases (including representative sequences after clustering at a given level of similarity). Different web tools also allow searches by sequence similarity. The presence of both rRNA and rDNA sequences, taking into account introns (crucial for eukaryotic sequences), a normalized eight terms ranked-taxonomy and updates of new GenBank releases were made possible by a long-term collaboration between experts in taxonomy and computer scientists.
Nucleic Acids Research (0305-1048) (Oxford Univ Press), 2013-01 , Vol. 41 , N. D1 , P. D597-D604

Droits : The Author(s) 2012. Published by Oxford University Press.
http://archimer.ifremer.fr/doc/00114/22492/20174.pdf
DOI:10.1093/nar/gks1160
http://archimer.ifremer.fr/doc/00114/22492/

Éditeur(s) : SPC
Fisheries Newsletter (0248-076X) (SPC), 2011-09 , Vol. 136 , P. 35-45

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/00115/22657/20383.pdf
http://archimer.ifremer.fr/doc/00115/22657/20384.pdf
http://archimer.ifremer.fr/doc/00115/22657/

Éditeur(s) : HAL CCSD Nature Publishing Group
Résumé : International audience
Treacher Collins/Franceschetti syndrome (TCS; OMIM 154500) is a disorder of craniofacial development belonging to the heterogeneous group of mandibulofacial dysostoses. TCS is classically characterized by bilateral mandibular and malar hypoplasia, downward-slanting palpebral fissures, and microtia. To date, three genes have been identified in TCS:,TCOF1, POLR1D, and POLR1C. We report a clinical and extensive molecular study, including TCOF1, POLR1D, POLR1C, and EFTUD2 genes, in a series of 146 patients with TCS. Phenotype-genotype correlations were investigated for 19 clinical features, between TCOF1 and POLR1D, and the type of mutation or its localization in the TCOF1 gene. We identified 92/146 patients (63%) with a molecular anomaly within TCOF1, 9/146 (6%) within POLR1D, and none within POLR1C. Among the atypical negative patients (with intellectual disability and/or microcephaly), we identified four patients carrying a mutation in EFTUD2 and two patients with 5q32 deletion encompassing TCOF1 and CAMK2A in particular. Congenital cardiac defects occurred more frequently among patients with TCOF1 mutation (7/92, 8%) than reported in the literature. Even though TCOF1 and POLR1D were associated with extreme clinical variability, we found no phenotype-genotype correlation. In cases with a typical phenotype of TCS, 6/146 (4%) remained with an unidentified molecular defect.
ISSN: 1098-3600

hal-01134364
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01134364
DOI : 10.1038/gim.2015.29
PUBMED : 25790162

Éditeur(s) : Amer Assoc Advancement Science
Science (0036-8075) (Amer Assoc Advancement Science), 2013-05 , Vol. 340 , N. 6134 , P. 810-811

Droits : 2013 American Association for the Advancement of Science. All Rights Reserved.
http://archimer.ifremer.fr/doc/00139/25068/23186.pdf
DOI:10.1126/science.340.6134.810-b
http://archimer.ifremer.fr/doc/00139/25068/

Éditeur(s) : HAL CCSD BioMed Central
Résumé :  
absent
ISSN: 1471-2148

hal-01032078
https://hal.archives-ouvertes.fr/hal-01032078
DOI : 10.1186/1471-2148-10-202

Éditeur(s) : HAL CCSD Consejo Superior de Investigaciones Científicas
Résumé : International audience
The temporal variation in carbon and nitrogen isotopic compositions (noted as δ 13 C and δ 15 N) was investigated in the convict surgeonfish (Acanthurus triostegus) at Moorea (French Polynesia). Over a period of 24 days, juveniles were reared in aquaria and subjected to two different feeding treatments: granules or algae. The dynamics of δ 13 C and δ 15 N in two muscles (the adductor mandibulae complex and the epaxial musculature) having different functions were compared. At the end of experiments, a steady-state isotopic system in each muscle tissue was not reached. Especially for the algal treatment, we found different patterns of variation in isotopic compositions over time between the two muscles. The turnovers of δ 13 C showed opposite trends for each muscle but differences are mitigated by starvation and by the metamorphosis. Our study highlighted that the metabolism of coral reef fish may be subjected to catabolism or anabolism of non-protein precursors at settlement, inducing variation in isotopic compositions that are not linked to diet change. Comparación de la dinámica de variación isotópica en dos músculos de un pez de arrecife de coral durante la fase de asentamiento Resumen: La variación temporal en la composiciones isotópicas del carbono y nitrógeno (δ 13 C y δ 15 N) fue investigada en el pez cirujano Acanthurus triostegus en Moorea (Polinesia Francesa). Durante un período de 24 días, peces juveniles se mantuvieron en acuarios y se sometieron a dos tratamientos de alimentación: gránulos o algas. Se compararon las dinámicas de cambio δ 13 C y δ 15 N en dos músculos con diferentes funciones (complejo aductor mandibular y musculatura epiaxial). Al final de los experimentos, no se alcanzó un sistema isotópico de estado estacionario en ningún tejido. Especialmente para el tratamiento de algas, encontramos distintos patrones de variación en composiciones isotópicas en el tiempo entre los dos músculos. Las variaciones en δ 13 C mostraron tendencias opuestas para cada músculo, pero las diferencias fueron mitigadas por la inanición y la metamorfosis. Nuestro estudio destaca que el metabolismo de los peces de arrecife puede ser sometido a catabolismo o anabolismo por los precursores no proteicos durante el asentamiento, induciendo variación en las composi-ciones isotópicas que no están vinculados al cambio de dieta.
ISSN: 0214-8358

Droits : http://creativecommons.org/licenses/by-nc/
hal-01212253
https://hal-univ-perp.archives-ouvertes.fr/hal-01212253
https://hal-univ-perp.archives-ouvertes.fr/hal-01212253/document
https://hal-univ-perp.archives-ouvertes.fr/hal-01212253/file/1598-3145-1-PB.pdf
DOI : 10.3989/scimar.04225.31A

Résumé : Cet atlas de sensibilité du littoral aux pollutions marines a été produit dans le cadre du projet "Elaboration des Atlas Polmar et DCE" confié par l'Etat (DEAL - La Réunion) au laboratoire universitaire LETG-Brest Géomer de Brest en lien avec la délégation IFREMER océan Indien. Le dispositif spécifique Polmar constitue un volet spécifique du dispositif opérationnel ORSEC départemental. Théoriquement révisé tous les cinq ans, il doit notamment fournir "un inventaire précis et hiérarchisé des zones à protéger en priorité". Etabli sous la forme d'un atlas de sensibilité des littoraux, annexe obligatoire du dispositif spécifique Polmar-Terre, cet inventaire est un document synthétique d'aide à la décision dans le contexte préparatoire et opérationnel de la lutte anti-pollution. L'opération confiée au laboratoire LETG-Brest Géomer, s'est organisée en 3 phases : •Phase 1 : Inventaire des données pertinentes pour produire l’atlas de sensibilité. Cette étape a consisté tout particulièrement à rassembler et à exploiter l’information géographique produite et diffusée par les services de l’Etat et par ses partenaires dans le cadre de leurs missions sur le littoral. Des données complémentaires ont également été recherchées dans la documentation ou sur le terrain. L'inventaire reprend la méthodologie développée pour la production des atlas de Haute et de Basse Normandie dans le cadre de la MIMEL. Pour chaque jeu de données, le travail a consisté à identifier les sources (propriétaires et contacts), les formats, les modalités d'acquisition, de diffusion et de mise à jour. Les données disponibles ont ensuite été collectées et structurées conformément aux principes d'archivages et de catalogages normalisés par la directive européenne INSPIRE pour les infrastructures de données. •Phase 2 : Structuration de l’information géographique. L’ensemble des données et des informations exploitées ou produites a été intégré dans le serveur de cartographie SEXTANT et ainsi mis à disposition de l'ensemble des partenaires, afin d'améliorer l'approche globale et partagée des milieux marins et littoraux. Le SIG créé permettra de garantir une mise à jour en continu de l'atlas de l'île de La Réunion. Sa pérennité nécessitera cependant une démarche partenariale et la mise en oeuvre d'un suivi. •Phase 3 : Exploitation de l’information géographique pour produire l’atlas de sensibilité du littoral réunionnais. L’atlas de sensibilité a été produit dans un format numérique accessible à partir de la Base de Données SEXTANT Remata de l'Ifremer. A terme, il sera intégré au serveur de cartographie CARMEN permettant d’accéder aux données employées pour la production des atlas afin de pouvoir éditer à la demande des cartes au contenu et à l’échelle personnalisés. L’intérêt de cette version numérique réside également dans sa capacité de diffusion largement accrue. Une version PDF de l’atlas et son édition papier ont également été préparées. Une déclinaison numérique sur un portail Sextant dédié (http://www.ifremer.fr/sextant/fr/web/POLMAR_REUNION) a été développé par la Délégation Ifremer Océan Indien. L'intérêt majeure de cette version WEB et de garantir une réactualisation immédiate des cartes de l'ATLAS dès qu'une mise à jour de données sera effective sur Sextant.

Droits : 2012 Ifremer, DEAL La Réunion - Direction de l'Environnement, de l'Aménagement et du Logement, IUEM, UBO
http://archimer.ifremer.fr/doc/00144/25479/23632.pdf
http://archimer.ifremer.fr/doc/00144/25479/

Éditeur(s) : Amer Soc Biochemistry Molecular Biology Inc
Résumé : Scleractinian corals are the most basal eumetazoan taxon and provide the biological and physical framework for coral reefs, which are among the most diverse of all ecosystems. Over the past three decades and coincident with climate change, these phototrophic symbiotic organisms have been subject to increasingly frequent and severe diseases, which are now geographically widespread and a major threat to these ecosystems. Although coral immunity has been the subject of increasing study, the available information remains fragmentary, especially with respect to coral antimicrobial responses. In this study, we characterized damicornin from Pocillopora damicornis, the first scleractinian antimicrobial peptide (AMP) to be reported. We found that its precursor has a segmented organization comprising a signal peptide, an acidic proregion, and the C-terminal AMP. The 40-residue AMP is cationic, C-terminally amidated, and characterized by the presence of six cysteine molecules joined by three intramolecular disulfide bridges. Its cysteine array is common to another AMP and toxins from cnidarians; this suggests a common ancestor, as has been proposed for AMPs and toxins from arthropods. Damicornin was active in vitro against Gram-positive bacteria and the fungus Fusarium oxysporum. Damicornin expression was studied using a combination of immunohistochemistry, reverse phase HPLC, and quantitative RT-PCR. Our data show that damicornin is constitutively transcribed in ectodermal granular cells, where it is stored, and further released in response to nonpathogenic immune challenge. Damicornin gene expression was repressed by the coral pathogen Vibrio coralliilyticus. This is the first evidence of AMP gene repression in a host-Vibrio interaction.
Journal Of Biological Chemistry (0021-9258) (Amer Soc Biochemistry Molecular Biology Inc), 2011-06 , Vol. 286 , N. 25 , P. 22688-22698

Droits : 2011 by The American Society for Biochemistry and Molecular Biology, Inc.
http://archimer.ifremer.fr/doc/00039/14996/12433.pdf
DOI:10.1074/jbc.M110.216358
http://archimer.ifremer.fr/doc/00039/14996/

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : International audience
This paper presents a synthesis of a multidisciplinary study carried out along the Nîmes Roman aqueduct, located in the southeast part of France. The study was motivated by archaeologists attempting to explain the partial destructions of only one aerial bridge of the aqueduct (Pont de la Lône). Given its close proximity to the Nîmes seismically active fault, a possible seismic origin for the destructions was invoked. Seismologists and structural engineers thus carried out a variety of field and numerical investigations to test the seismic hypothesis. Supporting field evidence was found first along the aerial bridge section of the aqueduct: broken stalactites, arch warping, cracks and destruction of the bridge just above a breast wall shortly after its construction. Secondly, the underground part of the canal was analysed: irregularity in the thickness of calcite deposits of the canal walls, presence of numerous cracks, horizontal shift of the otherwise linear structure of the canal and presence of calcite twins in the deposits, found only where the canal crosses the Nîmes fault system. Numerical modelling and experimental results show that (1) only the Pont de la Lône would have suffered serious damage under seismic solicitation (assuming an M6 earthquake at 10 km distance). The second aerial bridge, the three levels arches Pont du Gard, an historical monument still standing today, would have suffered less damage, due to its very different fundamental frequency of around 0.4 Hz, far from the amplified seismic near-field spectrum; (2) the numerical models also show that a fall of the canal wall would require a higher magnitude event (M > 6); (3) the presence of calcite twinning requires a differential static stress of 4 MPa or greater, which can only be achieved very close to the fault rupture of a M > 6 earthquake; (4) finally, local surface rupturing of such a fault would also corroborate the hypothesis that the observed offset of the canal may be partly seismically induced. Although other possible origins for each individual evidence may not be excluded, the observed spatiotemporal concentration of architectural/geological anomalies together with the numerical results allow us to support a possible co-seismic origin for these disorders, indirectly attesting to the potential seismic activity (M > 6) of the nearby Nîmes fault. Furthermore, following the conclusions of archaeological studies, the disorders occurred between 250 and 350 year AD, thus providing timing for this possible seismic event, an essential parameter in seismic hazard analysis. These results validate the archaeo-seismological approach as a tool that may help improve the knowledge of major infrequent earthquakes in areas of moderate seismic activity.
ISSN: 0921-030X

hal-00379064
https://hal.archives-ouvertes.fr/hal-00379064
DOI : 10.1007/s11069-008-9276-9

Éditeur(s) : HAL CCSD
Résumé : 00000
International audience
Australian Journal of Chemistry - an International Journal for Chemical Science publishes research papers from all fields of chemical science.
Australian Journal of Chemistry

hal-01483154
https://hal.archives-ouvertes.fr/hal-01483154
DOI : 10.1071/CH16455

Éditeur(s) : HAL CCSD American Association for the Advancement of Science
Résumé : International audience
Most eukaryotic organisms are arthropods. Yet, their diversity in rich terrestrial ecosystems is still unknown. Here we produce tangible estimates of the total species richness of arthropods in a tropical rainforest. Using a comprehensive range of structured protocols, we sampled the phylogenetic breadth of arthropod taxa from the soil to the forest canopy in the San Lorenzo forest, Panama. We collected 6144 arthropod species from 0.48 hectare and extrapolated total species richness to larger areas on the basis of competing models. The whole 6000-hectare forest reserve most likely sustains 25,000 arthropod species. Notably, just 1 hectare of rainforest yields >60% of the arthropod biodiversity held in the wider landscape. Models based on plant diversity fitted the accumulated species richness of both herbivore and nonherbivore taxa exceptionally well. This lends credence to global estimates of arthropod biodiversity developed from plant models.
ISSN: 0036-8075

hal-00817285
https://hal.archives-ouvertes.fr/hal-00817285
https://hal.archives-ouvertes.fr/hal-00817285/document
https://hal.archives-ouvertes.fr/hal-00817285/file/1226727Revisedtext.pdf
DOI : 10.1126/science.1226727