Éditeur(s) : HAL CCSD American Association for the Advancement of Science
Résumé : International audience
Most eukaryotic organisms are arthropods. Yet, their diversity in rich terrestrial ecosystems is still unknown. Here we produce tangible estimates of the total species richness of arthropods in a tropical rainforest. Using a comprehensive range of structured protocols, we sampled the phylogenetic breadth of arthropod taxa from the soil to the forest canopy in the San Lorenzo forest, Panama. We collected 6144 arthropod species from 0.48 hectare and extrapolated total species richness to larger areas on the basis of competing models. The whole 6000-hectare forest reserve most likely sustains 25,000 arthropod species. Notably, just 1 hectare of rainforest yields >60% of the arthropod biodiversity held in the wider landscape. Models based on plant diversity fitted the accumulated species richness of both herbivore and nonherbivore taxa exceptionally well. This lends credence to global estimates of arthropod biodiversity developed from plant models.
ISSN: 0036-8075

hal-00817285
https://hal.archives-ouvertes.fr/hal-00817285
https://hal.archives-ouvertes.fr/hal-00817285/document
https://hal.archives-ouvertes.fr/hal-00817285/file/1226727Revisedtext.pdf
DOI : 10.1126/science.1226727

Éditeur(s) : Elsevier
Résumé : We present new results from the MARADJA'03 cruise depicting the geological structures offshore central and western Algeria. Using swath bathymetry and seismic reflection data, we map and discuss the offshore limits of the Internal Zones corresponding to relics of the AIKaPeCa domain that drifted and collided the African plate during the Miocene. We identify large reverse faults and folds that reactivate part of these limits and are still active today. The morphology of the westernmost NE-SW margin suggests a former strike-slip activity accommodating a westward block translation responsible for the shift of the Internal Zones towards the Moroccan Rif.
Nous présentons les résultats récents de la campagne MARADJA'03, qui visent à mettre en évidence les structures géologiques dans le domaine marin au nord-ouest de l'Algérie. Grâce aux données de bathymétrie multifaisceau et de sismique réflexion, nous cartographions et discutons les limites en mer des Zones internes correspondant aux reliques du domaine AlKaPeCa qui a dérivé, puis est entré en collision avec la plaque africaine au Miocène. De grandes failles inverses et plis, actifs dans le champ de contrainte actuel, réactivent certaines de ces limites. La marge ouest-algérienne, orientée NE¿SW, indique la présence d'une ancienne activité en décrochement ayant accommodé la translation des Zones internes vers l'ouest.
Comptes Rendus Geoscience (1631-0713) (Elsevier), 2006 , Vol. 338 , N. 1-2 , P. 80-91

Droits : 2005 Académie des sciences Published by Elsevier SAS
http://archimer.ifremer.fr/doc/2006/publication-1211.pdf
DOI:10.1016/j.crte.2005.11.009
http://archimer.ifremer.fr/doc/00000/1211/

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : Plant litter diversity effects on decomposition rates are frequently reported, but with a strong bias towards temperate ecosystems. Altered decomposition and nutrient recycling with changing litter diversity may be particularly important in tree species-rich tropical rainforests on nutrient-poor soils. Using 28 different mixtures of leaf litter from 16 Amazonian rainforest tree species, we tested the hypothesis that litter mixture effects on decomposition increase with increasing functional litter diversity. Litter mixtures and all single litter species were exposed in the field for 9 months using custom-made microcosms with soil fauna access. In order to test the hypothesis that the long-term presence of tree species contributing to the litter mixtures increases mixture effects on decomposition, microcosms were installed in a plantation at sites including the respective tree species composition and in a nearby natural forest where these tree species are absent. We found that mixture decomposition deviated from predictions based on single species, with predominantly synergistic effects. Functional litter diversity, defined as either richness, evenness, or divergence based on a wide range of chemical traits, did not explain the observed litter mixture effects. However, synergistic effects in litter mixtures increased with the long-term presence of tree species contributing to these mixtures as the home field advantage hypothesis assumes. Our data suggest that complementarity effects on mixed litter decomposition may emerge through long-term interactions between aboveground and belowground biota.
ISSN: 0029-8549

hal-01032393
https://hal.archives-ouvertes.fr/hal-01032393
DOI : 10.1007/s00442-011-1966-4

Éditeur(s) : HAL CCSD Public Library of Science
Résumé : International audience
Here we show that Daceton armigerum, an arboreal myrmicine ant whose workers are equipped with hypertrophied trap-jaw mandibles, is characterized by a set of unexpected biological traits including colony size, aggressiveness, trophobiosis and hunting behavior. The size of one colony has been evaluated at ca. 952,000 individuals. Intra- and interspecific aggressiveness were tested and an equiprobable null model used to show how D. armigerum colonies react vis-à-vis other arboreal ant species with large colonies; it happens that D. armigerum can share trees with certain of these species. As they hunt by sight, workers occupy their hunting areas only during the daytime, but stay on chemical trails between nests at night so that the center of their home range is occupied 24 hours a day. Workers tend different Hemiptera taxa (i.e., Coccidae, Pseudococcidae, Membracidae and Aethalionidae). Through group-hunting, short-range recruitment and spread-eagling prey, workers can capture a wide range of prey (up to 94.12 times the mean weight of foraging workers).
ISSN: 1932-6203

hal-00825759
https://hal.archives-ouvertes.fr/hal-00825759
https://hal.archives-ouvertes.fr/hal-00825759/document
https://hal.archives-ouvertes.fr/hal-00825759/file/Dejean2012_TheEcology.pdf
DOI : 10.1371/journal.pone.0037683

Éditeur(s) : HAL CCSD
Résumé :  
absent
9. Journées d'Ecologie Fonctionnelle
Biarritz, France

hal-01032071
https://hal.archives-ouvertes.fr/hal-01032071

Éditeur(s) : HAL CCSD Wiley
Résumé :  
Distinct ecosystem level carbon : nitrogen : phosphorus (C : N : P) stoichiometries in forest foliage have been suggested to reflect ecosystem-scale selection for physiological strategies in plant nutrient use. Here, this hypothesis was explored in a nutrient-poor lowland rainforest in French Guiana. * Variation in C, N and P concentrations was evaluated in leaf litter and foliage from neighbour trees of 45 different species, and the litter concentrations of major C fractions were also measured. * Litter C ranged from 45.3 to 52.4%, litter N varied threefold (0.68-2.01%), and litter P varied seven-fold (0.009-0.062%) among species. Compared with foliage, mean litter N and P concentrations decreased by 30% and 65%, respectively. Accordingly, the range in mass-based N : P shifted from 14 to 55 in foliage to 26 to 105 in litter. Resorption proficiencies indicated maximum P withdrawal in most species, but with a substantial increase in variation in litter P compared with foliage. * These data suggest that constrained ecosystem-level C : N : P ratios do not preclude the evolution of highly diversified strategies of nutrient use and conservation among tropical rainforest tree species. The resulting large variation in litter quality will influence stoichiometric constraints within the decomposer food web, with potentially far-ranging consequences on nutrient dynamics and plant-soil feedbacks.
ISSN: 0028-646X

hal-01032108
https://hal.archives-ouvertes.fr/hal-01032108
DOI : 10.1111/j.1469-8137.2008.02438.x

Éditeur(s) : HAL CCSD Springer Verlag
Résumé :  
The high spatial variability of soil respiration in tropical rainforests is well evaluated, but influences of biotic factors are not clearly understood. This study underlines the influence of tree species characteristics on soil respiration across a 16-monospecific plot design in a tropical plantation of French Guiana. A large variability of soil CO2 fluxes was observed among plots (i.e. 2.8 to 6.8 μmol m−2 s −1 ) with the ranking being constant across seasons. There were no significant relationships between soil respiration and soil moisture or soil temperature, neither spatially, nor seasonally. The variability of soil respiration was mainly explained by quantitative factors such as leaf litterfall and basal area. Surprisingly, no significant relationship was observed between soil respiration and root biomass. However, the influence of substrate quality was revealed by a strong relationship between soil respiration and litterfall P (and litterfall N, to a lesser extent).
ISSN: 0032-079X

hal-01032069
https://hal.archives-ouvertes.fr/hal-01032069
DOI : 10.1007/s11104-008-9866-z

Éditeur(s) : HAL CCSD
Résumé : International audience
Up-to-date estimates of the health outcomes of preterm children are needed for assessing perinatal care, informing parents, making decisions about care, and providing evidence for clinical guidelines. To determine survival and neonatal morbidity of infants born from 22 through 34 completed weeks' gestation in France in 2011 and compare these outcomes with a comparable cohort in 1997. The EPIPAGE-2 study is a national, prospective, population-based cohort study conducted in all maternity and neonatal units in France in 2011. A total of 2205 births (stillbirths and live births) and terminations of pregnancy at 22 through 26 weeks' gestation, 3257 at 27 through 31 weeks, and 1234 at 32 through 34 weeks were studied. Cohort data were collected from January 1 through December 31, 1997, and from March 28 through December 31, 2011. Analyses for 1997 were run for the entire year and then separately for April to December; the rates for survival and morbidities did not differ. Data are therefore presented for the whole year in 1997 and the 8-month and 6-month periods in 2011. Survival to discharge and survival without any of the following adverse outcomes: grade III or IV intraventricular hemorrhage, cystic periventricular leukomalacia, severe bronchopulmonary dysplasia, retinopathy of prematurity (stage 3 or higher), or necrotizing enterocolitis (stages 2-3). A total of 0.7% of infants born before 24 weeks' gestation survived to discharge: 31.2% of those born at 24 weeks, 59.1% at 25 weeks, and 75.3% at 26 weeks. Survival rates were 93.6% at 27 through 31 weeks and 98.9% at 32 through 34 weeks. Infants discharged home without severe neonatal morbidity represented 0% at 23 weeks, 11.6% at 24 weeks, 30.0% at 25 weeks, 47.5% at 26 weeks, 81.3% at 27 through 31 weeks, and 96.8% at 32 through 34 weeks. Compared with 1997, the proportion of infants surviving without severe morbidity in 2011 increased by 14.4% (P < .001) at 25 through 29 weeks and 6% (P < .001) at 30 through 31 weeks but did not change appreciably for those born at less than 25 weeks. The rates of antenatal corticosteroid use, induced preterm deliveries, cesarean deliveries, and surfactant use increased significantly in all gestational-age groups, except at 22 through 23 weeks. The substantial improvement in survival in France for newborns born at 25 through 31 weeks' gestation was accompanied by an important reduction in severe morbidity, but survival remained rare before 25 weeks. Although improvement in survival at extremely low gestational age may be possible, its effect on long-term outcomes requires further studies. The long-term results of the EPIPAGE-2 study will be informative in this regard.
ISSN: 2168-6211

hal-01258705
http://hal.univ-brest.fr/hal-01258705
PUBMED : 25621457
DOI : 10.1001/jamapediatrics.2014.3351

Éditeur(s) : HAL CCSD Landes Bioscience
Résumé : International audience
In 2008 we published the first set of guidelines for standardizing research in autophagy. Since then, research on this topic has continued to accelerate, and many new scientists have entered the field. Our knowledge base and relevant new technologies have also been expanding. Accordingly, it is important to update these guidelines for monitoring autophagy in different organisms. Various reviews have described the range of assays that have been used for this purpose. Nevertheless, there continues to be confusion regarding acceptable methods to measure autophagy, especially in multicellular eukaryotes. A key point that needs to be emphasized is that there is a difference between measurements that monitor the numbers or volume of autophagic elements (e.g., autophagosomes or autolysosomes) at any stage of the autophagic process vs. those that measure flux through the autophagy pathway (i.e., the complete process); thus, a block in macroautophagy that results in autophagosome accumulation needs to be differentiated from stimuli that result in increased autophagic activity, defined as increased autophagy induction coupled with increased delivery to, and degradation within, lysosomes (in most higher eukaryotes and some protists such as Dictyostelium) or the vacuole (in plants and fungi). In other words, it is especially important that investigators new to the field understand that the appearance of more autophagosomes does not necessarily equate with more autophagy. In fact, in many cases, autophagosomes accumulate because of a block in trafficking to lysosomes without a concomitant change in autophagosome biogenesis, whereas an increase in autolysosomes may reflect a reduction in degradative activity. Here, we present a set of guidelines for the selection and interpretation of methods for use by investigators who aim to examine macroautophagy and related processes, as well as for reviewers who need to provide realistic and reasonable critiques of papers that are focused on these processes. These guidelines are not meant to be a formulaic set of rules, because the appropriate assays depend in part on the question being asked and the system being used. In addition, we emphasize that no individual assay is guaranteed to be the most appropriate one in every situation, and we strongly recommend the use of multiple assays to monitor autophagy. In these guidelines, we consider these various methods of assessing autophagy and what information can, or cannot, be obtained from them. Finally, by discussing the merits and limits of particular autophagy assays, we hope to encourage technical innovation in the field.
Autophagy

hal-00735751
https://hal.archives-ouvertes.fr/hal-00735751
PUBMED : 22966490

Éditeur(s) : HAL CCSD
Résumé : Diffusion du document : INRA Antilles-Guyane, UMR ECOFOG, 97387 Kourou, Guyane (France)Diplôme : Maîtrise
il s'agit d'un type de produit dont les métadonnées ne correspondent pas aux métadonnées attendues dans les autres types de produit : DISSERTATION
Nous avons analysé la composition chimique de feuilles matures et sénescentes de 21 espèces d'arbres de forêt tropicale humide. Ces arbres ont été plantés il y a 20 ans, sur un sol uniforme pour tous, sous forme de jeunes plants. Cette plantation est organisée sous forme de placeaux mono-spécifiques et estsituée près de Kourou, en Guyane française. Les mesures de concentration d’azote, de phosphore, de carbone et des polyphénols ont été réalisées et ont permis de calculer le rapport C/N et la résorption desnutriments. Les compositions chimiques varient radicalement entre les espèces à la fois pour les feuilles matures et sénescentes : dans les feuilles matures les concen- trations en N et P varient de 1.03% à 2.69% et de 0,037% à 0,115%, respectivement. La concentration d'N dans les feuilles sénescentes varie de 0,72% à 2.03% et pour le P de 0,0 13% à 0.074%. La vitesse de croissance est positivement corrélée avec laconcentration d'N dans les feuilles. La résorption est le phénomène suivant lequel les plantes réabsorbent les nutriments des feuilles avant la période d'abscission pour les redistribuer à travers ses tissus.L'efficience de résorption varie fortement en fonction des espèces et est plus élevée pour le P que pour l'N. La résorption de l'N varie de -9,84% à 57.22% (moyenne ~30.7%) et celle du P varie de -15,75% à 79,56% (moyenne ~47.64%). Une analyse par corrélation montre que les résorptions de N et P sont signifi- cativement et positivement corrélés. Il y a aussi une corrélation significative et positive entre l'efficience de résorption et i) les concentrations en nutriment dans les feuilles vertes et ii) le coût de construction des feuilles et la vitesse de croissance.Parmi les espèces, une forte relation positive est trouvée entre le C/N de la litière et la résorption de l’N,suggérant que celle-ci est un élément déterminant de la qualité de la litière. Une forte résorption entraîne une faible qualité de litière et par conséquent une mauvaise décomposition. La résorption et la décomposition sont liés dans le recyclage des nutriments dans les écosystèmes, et sont négativement corrélés. Il semble que la connaissance de la résorption seule ou de la décomposition seule peut fausser la compréhension du fonctionnement de l’écosystème ou des espèces.
https://hal.archives-ouvertes.fr/hal-01189262

hal-01189262
https://hal.archives-ouvertes.fr/hal-01189262
PRODINRA : 21212

Éditeur(s) : HAL CCSD Springer Verlag (Germany)
Résumé : absent
Oecologia

hal-01032392
https://hal.archives-ouvertes.fr/hal-01032392
DOI : 10.1007/s00442-011-1966-4