Éditeur(s) : Society for General Microbiology
Résumé : A novel piezotolerant, mesophilic, facultatively anaerobic, organotrophic, polarly flagellated bacterium (strain LT13a(T)) was isolated from a deep sediment layer in the Nankai Trough (Leg 190, Ocean Drilling Program) off the coast of Japan. This organism used a wide range of organic substrates as sole carbon and energy sources: pyruvate, glutamate, succinate, fumarate, lactate, citrate, peptone and tryptone. Oxygen, nitrate, fumarate, ferric iron and cystine were used as electron acceptors. Maximal growth rates were observed at a hydrostatic pressure of 10 MPa. Hydrostatic pressure for growth was in the range 0.1-50 MPa. Predominant cellular fatty acids were 16:1 omega7c, 15: 0 iso, 16: 0 and 13: 0 iso. The G + C content of the DNA was 44.9 mol%. On the basis of 16S rRNA gene sequences, strain LT13a(T) was shown to belong to the gamma-Proteobacteria, being closely related to Shewanella putrefaciens (98%), Shewanella oneidensis (97%) and Shewanella baltica (96 %). Levels of DNA homology between strain LT13a(T) and S. putrefaciens, S. oneidensis and S. baltica were < 20 %, indicating that strain LT13a(T) represents a novel species. Genetic evidence and phenotypic characteristics showed that isolate LT13a(T) constitutes a novel species of the genus Shewanella, Because of the deep origin of the strain, the name Shewanella profunda sp. nov. is proposed, with LT13a(T) (= DSM 15900(T)-JCM 12080(T)) as the type strain.
International journal of systematic and evolutionary microbiology (1466-5026) (Society for General Microbiology), 2004-11 , Vol. 54 , N. 6 , P. 1943-1949

Droits : 2004 International Union of Microbiological Societies
http://archimer.ifremer.fr/doc/2004/publication-590.pdf
DOI:10.1099/ijs.0.03007-0
http://archimer.ifremer.fr/doc/00000/590/

Résumé : Chapters in Volume 1: - Law of the sea and international straits - Trends in the French merchant fleet - International shipping - Safety and rescue at sea, the case of yachting - Marine research and economic development - The respective roles played at sea by the state and local authorities - Social trends in populations linked to the sea: commercial seafarers - Future perspectives for marine leisure activities - French ports, outlook for the year 2000 Chapters in Volume 2: - European organisation in terms of seafood - The role of the sea in the development of the DOM/TOM (French overseas départements and territories) - France's international policy and naval and maritime resources - Naval strategies of the major powers - Europe's security in the Mediterranean, the example of the Balkans - Nuclear-weapon-free areas and peace zones at sea - France and geopolitical balances in the South Pacific - The North-west of the Indian Ocean and the world energy supply
Rapports des dix-sept groupes de séminaires de la promotion "Liberté, égalité, fraternité" de l'Ecole nationale d'administration, février à juillet 1988: Chapitres du Tome1: - Le droit de la mer et les détroits internationaux - L'évolution de la flotte de commerce française - Les transports maritimes internationaux - Sécurité et sauvetage en mer, le cas de la plaisance - Recherche en mer et développement économique - Les rôles respectifs de l'État et des collectivités locales en mer - L'évolution sociale des populations attachées à la mer : les marins de commerce - Les perspectives d'avenir des loisirs de la mer - Les ports français, perspectives pour l'an 2000 Chapitres du Tome2: - Organisation européenne en matière de produit de la mer - Le rôle de la mer dans le développement des DOM/TOM - La politique internationale de la France et les moyens navals et maritimes - Les stratégies navales des grandes puissances - La sécurité de l'Europe en Méditerranée, l'exemple des Balkans - Les zones exemptes d'armes nucléaires et les zones de paix en mer - La France et les équilibres géopolitiques dans le Pacifique Sud - Le Nord-Ouest de l'océan Indien et l'approvisionnement énergétique mondial

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/1988/rapport-1027.pdf
http://archimer.ifremer.fr/doc/1988/sup-1027.pdf
http://archimer.ifremer.fr/doc/00000/1027/

Éditeur(s) : Neidine editeurs
Résumé : The publication draws up a balance sheet about the natural marine assets of New Caledonia by distinguishing the coast and the intertidal zones, the coral reefs and lagoons, the open sea or "deep blue". A set of assets relative to the living and mineral natural resources, to the characteristics of the shallow and deep marine biodiversity, to the potential marine energy resources are discussed. This publication, edited in a Consumer directed free magazine, draws up a set of perspectives relative to a blue economy to be built in a country still very centred on its ground resources, essentially the nickel mining industry.
Le dossier dresse un bilan des atouts naturels de la nouvelle-Calédonie en matière marine en distinguant le littoral et l'intertidal, les récifs et lagons, la mer ouverte ou "grand bleu". Sont discutés un ensemble d'atouts relatifs aux ressources naturelles vivantes et minérales, aux caractéristiques de la biodiversité marine peu profonde et semi profonde, aux ressources énergétiques potentielles.Cette publication, éditée dans une revue orientée Grand Public, dresse un ensemble de perspectives relatives à une économie bleue à construire dans un pays encore très axé sur ses ressources terrestres, essentiellement l'industrie minière de nickel.
Taï Kona (2269-7535) (Neidine editeurs), 2013-03 , N. 1 , P. 12-25

Droits : Tai Kona
http://archimer.ifremer.fr/doc/00142/25350/23432.pdf
http://archimer.ifremer.fr/doc/00142/25350/

Éditeur(s) : Pêche thonière et dispositifs de concentration de poissons, Caribbean-Martinique, 15-19 Oct 1999
Résumé : Hawaii was one of the first locations to adapt the Philippine payao concept for use in high energy, deep-water environments. Initial experimental fad deployments were made by the National Marine Fisheries Service in 1977. In 1980, the State of Hawaii started deploying FADs in a programme that has since expanded to its current status of 52 approved surface fad sites. Funding is primarily derived from federal US programmes and the FADs are primarily focused on the sport fishing community. fad sites were selected to expedite access by sport fishermen; specific sites were chosen after consultation with fishermen at public hearings. Since 1997, the FAD system has been managed on a collaborative basis between the State of Hawaii and the University of Hawaii. Hawaiian FADs evolved through two previous designs before the current system of single-sphere spar-buoy was adopted. Today's FADs have an "inverse catenary" mooring system comprised of sections of floating and sinking rope attached to a "tripod" concrete block anchor system. fad sites range between 3.2 km and 46 km from shore. Mooring depths range between 200 and 3,000 metres. Average on-site longevity is 31 months; there is no correlation between longevity and depth of mooring. Windward locations have significantly shorter lifespans than leeward locations. Ten to twenty fads are replaced each year. Each FAD costs approximately us$ 7,500 to build and deploy. Hawaiian fads are heavily used by private and commercial sport fishermen and by small-scale artisanal and commercial fishermen. Commercial pole-and-line boats occasionally use the FADs to capture skipjack tuna. Hawaiian FADs will continue to be used for various types of pelagic fisheries research.

Droits : Ifremer
http://archimer.ifremer.fr/doc/00042/15280/12666.pdf
http://archimer.ifremer.fr/doc/00042/15280/

Éditeur(s) : HAL CCSD Wiley-Blackwell
Résumé : International audience
Archaea may be involved in global energy cycles, and are known for their ability to interact with eukaryotic species (sponges, corals and ascidians) or as archaeal-bacterial consortia. The recently proposed phylum Thaumarchaeota may represent the deepest branching lineage in the archaeal phylogeny emerging before the divergence between Euryarchaeota and Crenarchaeota. Here we report the first characterization of two marine thaumarchaeal species from shallow waters that consist of multiple giant cells. One species is coated with sulfur-oxidizing g-Proteobacteria. These new uncultured thaumarchaeal species are able to live in the sulfide-rich environments of a tropical mangrove swamp, either on living tissues such as roots or on various kinds of materials such as stones, sunken woods, etc. These archaea and archaea/bacteria associations have been studied using light microscopy, transmission electron microscopy and scanning electron microscopy. Species identification of archaeons and the putative bacterial symbiont have been assessed by 16S small subunit ribosomal RNA analysis. The sulfur-oxidizing ability of the bacteria has been assessed by genetic investigation on alpha-subunit of the adenosine-5_- phosphosulfate reductase/oxidase's (AprA). Species identifications have been confirmed by fluorescence in situ hybridization using specific probes designed in this study. In this article, we describe two new giant archaeal species that form the biggest archaeal filaments ever observed. One of these species is covered by a specific biofilm of sulfur-oxidizing g-Proteobacteria. This study highlights an unexpected morphological and genetic diversity of the phylum Thaumarchaeota.
ISSN: 1462-2912

hal-00715219
https://hal.univ-antilles.fr/hal-00715219
DOI : 10.1111/j.1462-2920.2010.02309.x

Résumé : Les biofilms électroactifs (EA) sont des consortia bactériens mono ou pluri-espèces, qui ont la faculté d’échanger des électrons provenant de leur métabolisme avec les surfaces solides conductrices des électrodes. Cette découverte est à l’origine d’un nouveau dispositif énergétique : la pile à combustible microbienne (PACM). Depuis les années 2000, la littérature scientifique sur les biofilms EA et sur les PACM explose, notamment grâce à la découverte de bactéries capables de transférer par voie directe – par des pili ou protéines transmembranaires – des électrons vers les électrodes. Plusieurs sources de bactéries EA ont été à ce jour découvertes, allant de cultures pures à des communautés bactériennes plus complexes. Ces dernières sont issues de milieux aqueux naturels (milieux marins ou d’eau douce), industriels ou urbains (effluents d’industrie, eaux usées domestiques). La plupart de ces sources bactériennes proviennent d’environnements de climat tempéré. Dans ce travail de thèse, plusieurs sols de milieux humides de la Guyane ont été identifiés comme étant de sources de bactéries EA. Les expériences menées sous potentiel d’électrode imposé et constant ont permis d’étudier l’adhésion à la surface d’électrode des biofilms EA issus de la flore endogène des milieux sélectionnés. La formation de bioanodes et de biocathodes a été possible en présence respectivement d’acétate et d’oxygène dans les milieux. Une étude par voltammétrie cyclique a mis en évidence les pics d’oxydo-réduction en lien avec les échanges électroniques du biofilm EA et de l’électrode. En optimisant la procédure de formation des biofilms EA par chronoampérométrie (surface d’électrode plus importante, apport en continu et progressif du substrat), une densité de courant maximale de 12 A/m2 et un rendement faradique de 24 % ont été obtenus. Une autre méthode pour former des biofilms EA à partir d’un milieu choisi, la mangrove, a consisté à utiliser deux prototypes de PACM : une pile à compartiment unique et à cathode à air, et une pile benthique. Dans les deux cas, les biofilms EA ont pu être formés et étudiés, complétant certaines observations faites sous potentiel imposé. La PACM benthique s’est avérée être la plus proche d’une application à grande échelle puisqu’elle a été complètement autonome : anode et cathode utilisant uniquement le milieu pour fonctionner. Elle a pu être étudiée en laboratoire comme sur le terrain.
Electroactive biofilms (EA) are mono or multi-species bacterial consortia, which have the ability to exchange electrons from their metabolism with solid surfaces of conductive electrodes. This discovery is the basis for a device of energy production: microbial fuel cell (MFC). Since the 2000s, the scientific literature on EA biofilms and MFC explodes, thanks to the discovery of bacteria that are able to transfer directly – by pili or trans-membrane proteins – electrons to electrodes. Several sources of EA bacteria were discovered to date, ranging from pure cultures to more complex bacterial communities. Those last are from natural (marine and freshwater), industrial or urban (industrial effluents, domestic wastewater) aqueous environments. However, the vast majority of these are from temperate environments.In this thesis, several wetland soils of French Guiana have been identified as sources of EA bacteria. Experiments under poised and constant electrode potential were used to examine adherence to the electrode surface of EA biofilms from the endogenous flora of selected environments. Formation of bioanodes and biocathodes was possible in the presence respectively of acetate and oxygen in the media. A study by cyclic voltammetry showed the redox peaks related to electronic exchanges between EA biofilm and electrode. By optimizing the process of EA biofilm formation by chronoamperometry (larger electrode surface, providing continuous and progressive substrate), a maximum current density of 12 A/m2 and a coulombic efficiency of 24% were obtained.Another method to form EA biofilms from a chosen medium (mangrove) was to use two MFC prototypes: a single compartment and air cathode one, and a benthic one. In both cases, the EA biofilms have been trained and studied supplementing certain observations made under poised polarization. MFC benthic proved to be the closest to a wide application since it was completely autonomous, anode and cathode only using the medium to function. It has been studied in the laboratory and in the field.

http://www.theses.fr/2012AGUY0560/document

Éditeur(s) : Elsevier
Résumé : During the SEDIFAN 1 cruise we surveyed the bathymetry and the acoustic properties of the surface sediment of the Celtic Deep Sea Fan. We also collected Kullenberg cores in order to study recent sedimentary processes. From the bathymetry survey it is relatively easy to recognize the main areas of modern fan. The upper fan included a large sedimentary ridge which constitutes the right levee of the prominent meandering Whittard valley. After its confluence with the Shamrock valley the course of the Whittard valley is abruptly deflected to the south. At a short distance to the south the valley divides into two upper-fan channels, the Celtic channel to the west being the deeper one. This point constitutes the centre of a radiating pattern which is developed on a 150 degrees quadrant and a radius of about 100 km. The acoustic imagery displays contrasted features, related to change in lithology within the first metre beneath the sea bottom and to the sea floor roughness. The Austell ridge exhibits a contrasted pattern of elongated areas with high and low acoustic backscattering levels. This pattern is related to the development of abyssal dunes, the amplitude of which is of metric order. Particularly remarkable is a lobe-shaped low back-scattering area in the western part of the middle fan, also noteworthy are a lineated facies to the west and a braided facies to the east of the fan. The laminated silty-clayey sequences deposited on the Whittard ridge and on the Trevelyan levee were deposited during the deglaciation. We interpret these as turbidity currents overflow deposits from the Whittard valley. At the end of isotopic stage 3 and during stage 2, the English Channel was a large plain flooded by the Channel River. During this period a broad delta developed at 100 m below the present-day depth and a wide spectrum of material was bound to be supplied to the deep sea and contributed particularly to the deposition of the Whittard ridge silty-clayey sequences. The stage 2 deposits are characterized by rhythmic levels enriched in monosulfides. These types of deposits are common in areas affected by fluvial discharges. Excluding the sedimentary ridge and the channel levees the surface deposits sampled with the Kullenberg corer are sandy. These sands are deposited in various contexts on the interfluve between the western and eastern channels and at channel mouths. They were emplaced during high sea level stands as a result of high energy gravity processes. The precise sources of these sands have not yet been identified, however benthic foraminifers from included ooze pebbles have living depths of between 500 and 1 000 m. The gravity processes which eroded this marry ooze may have been triggered on the upper slope. The Celtic shelf is presently a high energy platform where the conjunction of storms and spring tides call lead to enhanced sediment transport from near-shore to the deep sea. The relict or palimpsest deposits of the glacial delta also constitute a large reservoir of sandy material which can also be subject to reworking.
Le programme Enam 2 (European North Atlantic Margin) concerne l'étude des processus sédimentaires quaternaires du Spitzberg au golfe de Gascogne. Dans le cadre de ce programme, la reconnaissance de l'Éventail profond celtique était l'objectif de la campagne Sedifan 1 au cours de laquelle nous avons établi la morphologie de l'éventail et obtenu une image acoustique des fonds sédimentaires. La morphologie permet de mettre en évidence une organisation en éventail. On note aussi le développement remarquable d'une ride sédimentaire au niveau de l'éventail supérieur. Les sédiments prélevés révèlent la présence de dépôts sableux, témoins d'une activité récente qui pourrait être liée à l'importance de l'hydrodynamisme sur les Grands Bancs de la plate-forme celtique.
Oceanologica Acta (0399-1784) (Elsevier), 2000 , Vol. 23 , N. 1 , P. 109-116

Droits : 2000 Ifremer/CNRS/IRD/Editions scientifiques et medicales Elsevier SAS
http://archimer.ifremer.fr/doc/2000/publication-525.pdf
DOI:10.1016/S0399-1784(00)00116-X
http://archimer.ifremer.fr/doc/00000/525/

Éditeur(s) : Gauthier-Villars
Résumé : Global changes in marine geochemistry, on scales between one thousand and one million years permit the detailed correlation of sedimentary sequences in different ocean basins. The condition is that the geochemical signals are at least approximately dated by biostratigraphy (and magnetostratigraphy, where applicable). Through mutual reenforcement of chemostratigraphy and biostratigraphy unusually high stratigraphic resolution can be obtained. The integration of chemostratigraphy and biostratigraphy opens new avenues for analyzing the record-producing system within the framework of systemic stratigraphy. This type of stratigraphy focuses on global change in sea level, climate, and general geologic setting. It attempts to identify the underlying causes of global stratigraphic signals by considering 1) changes in input of matter and energy ; 2) changes in spatial distribution of sediments ; and 3) temporary changes in the partitioning of materials between active geochemical reservoirs. Examples from Pleistocene and Neogene deep-sea records illustrate the concepts and tools of this type of analysis.
Oceanologica Acta, Special issue (0399-1784) (Gauthier-Villars), 1981

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/00246/35689/34197.pdf
http://archimer.ifremer.fr/doc/00246/35689/

Éditeur(s) : Elsevier
Résumé : The discovery of deep-sea hydrothermal vent fauna, kilometres deep in the oceans, is a great achievement of 20th-century marine biology. The deep-sea hydrothermal food web does not directly depend on the sun's energy. Vent communities rely primarily on trophic associations between chemoautotrophic bacteria and consumers A small. number of endemic taxa are adapted to the inhospitable vent environments that are distributed along ridge crests. Where these vent communities originated and how they dispersed are among the important questions ecologists must answer. Here, by statistical analysis of the most comprehensive database ever assembled about deep-sea hydrothermal fauna, we delineate six major hydrothermal provinces in the world ocean and identify seven possible dispersal pathways between adjacent provinces. Our model suggests that the East-Pacific Rise may have played a pivotal role as a centre of dispersal for the hydrothermal fauna. Our data-driven conclusion will have to be tested by phylogenetic studies and completed by surveys of less-explored fields.
Deep Sea Research Part I: Oceanographic Research Papers (0967-0637) (Elsevier), 2009-08 , Vol. 56 , N. 8 , P. 1371-1378

Droits : 2009 Elsevier Ltd All rights reserved.
http://archimer.ifremer.fr/doc/2009/publication-6936.pdf
http://archimer.ifremer.fr/doc/2009/sup-6936.xls
DOI:10.1016/j.dsr.2009.01.009
http://archimer.ifremer.fr/doc/00000/6936/