Éditeur(s) : HAL CCSD
Résumé : International audience
Aegean extension is a process driven by slab rollback that, since 45 Ma, shows a twostage evolution. From Middle Eocene to Middle Miocene it is accommodated by localized deformation leading to i) the exhumation of high-pressure metamorphic rocks from mantle to crustal depths, ii) the exhumation of high-temperature rocks in core complexes and iii) the deposition of Paleogene sedimentary basins. Since Middle Miocene, extension is distributed over the whole Aegean domain giving a widespread development of onshore and offshore Neogene sedimentary basins. We reconstructed this two-stage evolution in 3D at Aegean scale by using available ages of metamorphic and sedimentary processes, geometry and kinematics of ductile deformation, paleomagnetic data and available tomographic models. The restorationmodel shows that the rate of trench retreat was around 0.6 cm/y during the first 30 My and then accelerated up to 3.2 cm/y during the last 15 My. The sharp transition observed in the mode of extension, localized versus distributed, which occurred in Middle Miocene correlates with the acceleration of trench retreat and is more likely a consequence of the Hellenic slab tearing documented by mantle tomography. The development of large dextral NE-SW strike-slip faults during the second stage of Aegean extension, since Middle Miocene, is illustrated by the 450 Km-long fault, recently put in evidence, offshore from Myrthes to Ikaria and onshore from Izmir to Balikeshir, in western Anatolia. Therefore, the interaction between the Hellenic trench retreat and the westward displacement of Anatolia started in Middle Miocene,almost 10 Ma before the propagation of the North Anatolian Fault in the North Aegean. This raises a fundamental issue concerning the dynamic relationship between slab tearing and Anatolia displacement
ISSN: 0438-9557

insu-01574659
https://hal-insu.archives-ouvertes.fr/insu-01574659
https://hal-insu.archives-ouvertes.fr/insu-01574659/document
https://hal-insu.archives-ouvertes.fr/insu-01574659/file/EFFECTS_OF_SLAB_ROLLBACK_ACCELERATION_ON_AEGEAN_EX.pdf
DOI : 10.12681/bgsg.11697

Éditeur(s) : HAL CCSD SPRINGER
Résumé : International audience
A key question in evolutionary biology is the reproducibility of adaptation. This question can now be quantitatively analyzed using experimental evolution coupled to whole genome sequencing (WGS). With complete sequence data, one can assess convergence among replicate populations. In turn, convergence reflects the action of natural selection and also the breadth of the field of possible adaptive solutions. That is, it provides insight into how many genetic solutions or adaptive paths may lead to adaptation in a given environment. Convergence is both a property of an adaptive landscape and, reciprocally, a tool to study that landscape. In this chapter we present the links between convergence and the properties of adaptive landscapes with respect to two types of microbial experimental evolution. The first tries to reconstruct a full adaptive landscape using a handful of carefully identified mutations (the reductionist approach), while the second uses WGS of replicate experiments to infer properties of the adaptive landscape. Reductionist approaches have highlighted the importance of epistasis in shaping the adaptive landscape, but have also uncovered a wide diversity of landscape architectures. The WGS approach has uncovered a very high diversity of beneficial mutations that affect a limited set of genes or functions and also suggests some shortcomings of the reductionist approach. We conclude that convergence may be better defined at an integrated level, such as the genic level or even at a phenotypic level, and that integrated mechanistic models derived from systems biology may offer an interesting perspective for the analysis of convergence at all levels.
ECOLOGICAL GENOMICS: ECOLOGY AND THE EVOLUTION OF GENES AND GENOMES

ISBN : 978-94-007-7347-9; 978-94-007-7346-2
hal-01544757
https://hal.archives-ouvertes.fr/hal-01544757
DOI : 10.1007/978-94-007-7347-9__11

Éditeur(s) : HAL CCSD National Academy of Sciences
Résumé : International audience
The complexity and depth of the relationships between the three domains of life challenge the reliability of phylogenetic methods, encouraging the use of alternative analytical tools. We reconstructed a gene similarity network comprising the proteomes of 14 eukaryotes, 104 prokaryotes, 2,389 viruses and 1,044 plasmids. This network contains multiple signatures of the chimerical origin of Eukaryotes as a fusion of an archaebacterium and a eubacterium that could not have been observed using phylogenetic trees. A number of connected components (gene sets with stronger similarities than expected by chance) contain pairs of eukaryotic sequences exhibiting no direct detectable similarity. Instead, many eukaryotic sequences were indirectly connected through a ``eukaryote-archaebacterium-eubacterium-eukaryote'' similarity path. Furthermore, eukaryotic genes highly connected to prokaryotic genes from one domain tend not to be connected to genes from the other prokaryotic domain. Genes of archaebacterial and eubacterial ancestry tend to perform different functions and to act at different subcellular compartments, but in such an intertwined way that suggests an early rather than late integration of both gene repertoires. The archaebacterial repertoire has a similar size in all eukaryotic genomes whereas the number of eubacterium-derived genes is much more variable, suggesting a higher plasticity of this gene repertoire. Consequently, highly reduced eukaryotic genomes contain more genes of archaebacterial than eubacterial affinity. Connected componentswith prokaryotic and eukaryotic genes tend to include viral and plasmid genes, compatible with a role of gene mobility in the origin of Eukaryotes. Our analyses highlight the power of network approaches to study deep evolutionary events.
ISSN: 0027-8424

hal-01544798
https://hal.archives-ouvertes.fr/hal-01544798
DOI : 10.1073/pnas.1211371110

Éditeur(s) : HAL CCSD Société géologique de France
Résumé : New-Caledonia island consists of an ultramafic nappe thrusted over a continental and arc-derived basement as the result of the closure of a back-arc basin during the upper Eocene. The morphology of New-Caledonia is mostly characterized by its elongated shape and rectilinear coastline. Indeed, the western and eastern edges of the island are delineated by N140 trending normal faults that are well imaged on seismic lines. Major tectonic lineaments onland, including the scarps corresponding to the main boundary of the ultramafic nappe, also trend N140 suggesting a morphotectonic control by faults having similar kinematics (longitudinal flexure-fault of previous authors). We provide detailed observations from some of these scarps demonstrating indeed that these are not erosional features in origin. We explore the possibility that such surfaces do represent major tectonic limits that accommodated extension and significant tectonic thinning of both the peridotite nappe and its basement. Remnants of a complex extensional fault zone, 200 m wide, are still preserved along the western scarp of the Mont Dore mountain, close to Noumea city. The deformed zone is composed of an early shallow dipping detachment fault, some decimeters thick, offset by a group of late high angle normal faults and is bounded by cataclastic breccias that progressively pass into the fractured host peridotite. The late high angle fault zones have been the site of important syn-tectonic fluid circulation and are underlined by cm-thick silica infills bearing vertical striae. Typical morphology of the main scarps with break of slope is related to the combination of high angle normal faults and low angle detachment. Similar shallow dipping detachment surfaces have been observed along the east coast of southern New-Caledonia as well as within the ultramafic nappe itself and its basement. This study confirms that N140 oriented, large fault zones, with pure-normal to transtensional component of displacement, controlled the morphotectonic evolution of New-Caledonia at the regional scale, after the obduction of ophiolite nappe at the end of the Eocene. Such a fact has to be taken into account when attempting to reconstruct the post-obduction evolution of the island and more particularly when considering the development and distribution of the Ni-rich lateritic surfaces.
EISSN: 1777-5817

hal-00411855
https://hal.archives-ouvertes.fr/hal-00411855
DOI : 10.2113/gssgfbull.179.3.315

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
In oblique collision settings, parallel and perpendicular components of the relative plate motion can be partitioned into different structures of deformation and may be localized close to the plate boundary, or distributed on a wider region. In the Southern Alps of New Zealand, it has been proposed that one-third of the regional convergence is distributed in a broad area along the Southern Alps orogenic wedge. To better document and understand the regional dynamics of such systems, reliable markers of the horizontal tectonic motion over geological time scales are needed. River networks are able to record a large amount of distributed strain and they can thus be used to reconstruct the mode and rate of distribution away from major active structures. To explore the controls on river resilience to deformation, we develop an experimental model to investigate river pattern evolution over a doubly-vergent orogenic wedge growing in a context of oblique convergence. We use a rainfall system to activate erosion, sediment transport and river development on the model surface. At the end of the experiment, the drainage network is statistically rotated clockwise, confirming that rivers can record the distribution of motion along the wedge. Image analysis of channel time-space evolution shows how the fault-parallel and fault-perpendicular components of motion decrease toward the fault and impose rotation to the main trunk valleys. However, rivers do not record the whole imposed rotation rate, which suggest that the natural lateral channel dynamics can alter the capacity of rivers to act as passive markers of deformation.
ISSN: 0040-1951

hal-01467564
https://hal.archives-ouvertes.fr/hal-01467564
DOI : 10.1016/j.tecto.2016.04.016

Éditeur(s) : HAL CCSD Wiley/Blackwell
Résumé : Whole genome sequencing is helping generate robust phylogenetic hypotheses for a range of taxonomic groups that were previously recalcitrant to classical molecular phylogenetic approaches. As a case study, we performed a shallow shotgun sequencing of eight species in the tropical tree family Chrysobalanaceae to retrieve large fragments of high-copy number DNA regions and test the potential of these regions for phylogeny reconstruction. We were able to assemble the nuclear ribosomal cluster (nrDNA), the complete plastid genome (ptDNA) and a large fraction of the mitochondrial genome (mtDNA) with approximately 1000x, 450x and 120x sequencing depth respectively. The phylogenetic tree obtained with ptDNA resolved five of the seven internal nodes. In contrast, the tree obtained with mtDNA and nrDNA data were largely unresolved. This study demonstrates that genome skimming is a cost-effective approach and shows potential in plant molecular systematics within Chrysobalanaceae and other under-studied groups.
ISSN: 1755-098X

hal-01204217
https://hal.archives-ouvertes.fr/hal-01204217
DOI : 10.1111/1755-0998.12246
PRODINRA : 283530

Éditeur(s) : HAL CCSD
Résumé : International audience
BackgroundTree above ground biomass (AGB) is currently estimated by tree-level allometrical models that take into account, tree volume estimated from proxy variables of tree size (DBH) and species average wood specific gravity (WSG). These methods are common and realistic from a practical point of view. However, they do not take into account deviance from fixed allometrical trajectories and species or tree level WSG variations. Here, we present Xtrawood software that allows computation of tree AGB according to structure and WSG variations.MethodXtrawood reconstructs tree structure and integrates WSG variations by merging tree structure and WSG data measured at different position in trees, leading to the computation of global AGB and visualization of WSG variation along tree structure. Tree structure is measured according to stem dimensions (length, diameter) and positions within tree, and encoded in Multiscale Tree Graph format (MTG). WSG data is made of radial WSG profiles (1 measure each 0,5 cm from pith to bark) sampled at different heights within whole tree. Xtrawood output are illustrated using a dataset collected on an Amazonian forest ‘biomass dominant species’, Dicorynia guianensis Amsh., also known to exhibit substantial WSG gradients along both radial and vertical axis. 9 trees ranging from 15 to 60 cm DBH were measured by climbers. Each tree was felled and samples were collected at different positions (3 in trunk, 1 to 5 in crown) to record WSG radial profiles.ResultsXtrawood allows computation of tree volume, but also visualization of WSG variations in tree as well as inference of WSG radial profiles at different heights. Output variables are decomposed according to different tree scale and locations (axis, trunk/crown) and easy to extract. Xtrawood results will be compared to those of standard estimation method and can be used to identify positions in trees where WSG value leads to the better estimate of tree AGB.Conclusion/perspectiveXtrawood produces AGB estimate with data from intensive measurements practices. The sampling protocol, used here, remains destructive and time-consuming because Xtrawood is not directly dedicated to forest managers, but to help calibration of realistic sampling strategies. Moreover, Xtrawood offers a way to understand relationships between tree development, WSG variations within tree structure and biomass accumulation in the context of natural forests or plantations. A software demo is available at coffee break.
53rd Annual Meeting of the Association for Tropical Biology and Conservation (ATBC 2016)
Montpellier, France

Droits : http://creativecommons.org/licenses/by/
hal-01349613
https://hal.archives-ouvertes.fr/hal-01349613

Éditeur(s) : La recherche face aux pêches artisanales
Résumé : Each of nine people agreed to write a summary regarding changes in research on small-scale fishing in a large region of the world. These summaries that will be presented to you focus respectively on changes in research in Southeast Asia, in the South Pacific along the western coast of Latin America, in West Africa, in the Mediterranean, in Northwest Europe, and in North America. In order to help you reconstruct their actions in the halieutic context of the regions about which they are talking, Serge Garcia will first present us with a panorama of small-scale fishing. By asking them to do this study, we wished to be able to place the symposium's study within an overall framework and in an historical perspective. The objective was to relativise the conclusions that could be drawn from analyses of local situations, or, on the contrary, to allow them to be generalised by using bases of comparison. The summaries are far from being able to offer a planetary geographical coverage, just as they do not really include the evolution of all disciplines. The means available to the organisers did not allow for going up to that point. We must at this point thank the authors who agreed to do this complex work of summarisation, because they succeeded in showing the richness of such a step, which the participants will be able to appreciate in their reports. In this analysis of geographical syntheses, we would like to draw a few comparisons able to fuel the symposium's debates. We will examine how small-scale fishing became a subject of research, and the difficulty of defining it. Then we will see how the various disciplines became mutually involved, then specialised, depending upon the stages through which the research passed on this subject. The role of institutions and the weight of the contextual environment will be examined. Finally, we will propose a few possible directions for the debates on various themes of the symposium. Some outside contributions to the summaries also focus on the evolution of the research and we have taken that into account in this presentation. Limited to one country (Yahaya Jahara) or to one province (Maneschy and Furtado), they are useful complements to the summaries.
(OCR non controlé) Neuf personnes ont accepté de rédiger chacune une synthèse concernant l'évolution des recherches sur les pêches artisanales dans une grande région du monde. Les synthèses qui vont vous être présentées portent respectivement sur l'évolution des recherches en Asie du Sud-Est, dans le Pacifique-sud sur la façade occidentale de l'Amérique Latine, en ,Afrique de l'Ouest, en Méditerranée, en Europe du Nord- Ouest, en Amérique du Nord. Pour vous permettre de resituer leurs interventions dans le contexte halieutique des régions dont ils nous parlent, Serge Garcia nous présentera en premier lieu un panorama des pêches artisanales. En leur demandant ce travail, nous avons souhaité pouvoir replacer les travaux du symposium dans un cadre global et dans une perspective historique. L'objectif était de relativiser les conclusions qui pourraient être tirées d'analyses de situations locales, ou, au contraire, de permettre leur généralisation en disposant de bases de comparaison. Les synthèses sont loin d'offrir une couverture géographique planétaire, tout comme elles n'intègrent pas vraiment l'évolution de toutes les disciplines. Les moyens à la disposition des organisateurs ne permettaient pas d'aller jusque là. Il nous faut remercier ici les auteurs qui ont consenti à faire ce travail complexe de synthèse, car ils ont réussi à démontrer la richesse d'une telle démarche, ainsi que les participants pourront l'apprécier à travers leurs exposés. Dans cette analyse des synthèses géographiques, nous voudrions tenter quelques comparaisons de nature à alimenter les débats du symposium. Nous examinerons comment est née la pêche artisanale en tant qu'objet de recherche, et la difficulté de la définir. Puis nous verrons, en fonction des étapes par lesquelles sont passées les recherches sur ce sujet, comment les différentes disciplines se sont mutuellement impliquées, puis se sont spécialisées. Le rôle des institutions et le poids des contextes seront examinés. Enfin nous proposerons quelques orientations possibles pour les débats sur les différents thèmes du symposium. Certaines contributions extérieures aux synthèses portent aussi sur l'évolution des recherches et nous en avons tenu compte dans cette présentation. Limitées à un pays (Yahaya Jahara) ou à une province (Maneschy et Furtado), elles complètent utilement les synthèses.

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/1990/acte-2464.pdf
http://archimer.ifremer.fr/doc/00000/2464/

Éditeur(s) : HAL CCSD National Research Council Canada
Résumé : International audience
Back-arc extension in the Aegean, which was driven by slab rollback since 45 Ma, is described here for the first time in two stages. From Middle Eocene to Middle Miocene, deformation was localized leading to i) the exhumation of high-pressure metamorphic rocks to crustal depths, ii) the exhumation of high-temperature metamorphic rocks in core complexes and iii) the deposition of sedimentary basins. Since Middle Miocene, extension distributed over the whole Aegean domain controlled the deposition of onshore and offshore Neogene sedimentary basins. We reconstructed this two-stage evolution in 3D and four steps at Aegean scale by using available ages of metamorphic and sedimentary processes, geometry and kinematics of ductile deformation, paleomagnetic data and available tomographic models. The restoration model shows that the rate of trench retreat was around 0.6 cm/y during the first 30 My and then accelerated up to 3.2 cm/y during the last 15 My. The sharp transition observed in the mode of extension, localized versus distributed, in Middle Miocene correlates with the acceleration of trench retreat and is likely a consequence of the Hellenic slab tearing documented by mantle tomography. The development of large dextral NE-SW strike-slip faults, since Middle Miocene, is illustrated by the 450 Km-long fault zone, offshore from Myrthes to Ikaria and onshore from Izmir to Balikeshir, in western Anatolia. Therefore, the interaction between the Hellenic trench retreat and the westward displacement of Anatolia started in Middle Miocene, almost 10 Ma before the propagation of the North Anatolian Fault in the North Aegean.
ISSN: 0008-4077

insu-01271296
https://hal-insu.archives-ouvertes.fr/insu-01271296
https://hal-insu.archives-ouvertes.fr/insu-01271296/document
https://hal-insu.archives-ouvertes.fr/insu-01271296/file/Brun%20etal%20CJES%202016.pdf
DOI : 10.1139/cjes-2015-0203

Éditeur(s) : HAL CCSD
Résumé : National audience
Nocardiosis is an infectious disease with wide range of clinical features, which can eventually lead to death. The agent responsible belongs to the genus Nocardia that includes about fifty different species. Nocardiosis occurs mainly in immunocompromised hosts. We report here three cases of disseminated nocardiosis misdiagnosed initially as cerebral metastatic lung cancer. These patients, including two immunocompetent hosts, presented with both pulmonary and cerebral lesions. In all three patients, the diagnosis was based on magnetic resonance imaging with diffusion sequence, apparent diffusion coefficient reconstruction and neurosurgical cerebral biopsies. Treatment with an appropriate antibiotic regimen was prolonged for several months. Progress was favorable with full resolution of the neurological symptoms and the radiological abnormalities. These three cases emphasize the diagnostic challenge of nocardiosis, especially in disseminated disease.
Revue Des Maladies Respiratoires

hal-01659440
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01659440
DOI : 10.1016/j.rmr.2017.08.002
PUBMED : 28918971

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
In this contribution we present a reconstruction of the overall lithotectonic architecture, from inner zones to external ones, of the Paleoproterozoic Trans North China Orogen, within the North China Craton. Moreover, forward thermobarometrical modeling on a kyanite-bearing gneiss yields a reliable prograde P-T-t-D path. In addition, 40Ar/39Ar dating on rocks from distinct litho-tectonic units helps us to distinguish several tectono-metamorphic events during the orogenic development. Considering these results, we propose a geodynamic model involving three cratonic blocks, namely the Western, Fuping and Eastern Blocks, separated by two oceans, the Lüliang and Taihang Oceans. The opening of oceanic basins occurred around 2.2-2.3 Ga. After the westward subductions of oceanic lithosphere, the Trans-North-China Orogen was built up through a polyphase tectonic evolution within the period 1900-1800 Ma. The first event (D1) corresponded to the emplacement of lower and upper nappes herein called the Orthogneiss-and-Volcanites Unit (OVU) and the Low-Grade-and-Mafic Unit (LGMU), respectively. The syn-metamorphic D1 deformation (1880 ± 10 Ma) is characterized by a NW-SE stretching and mineral lineation with a top-to-the SE sense of shear. During ongoing compression of the thickening orogenic crust, a second deformation event D2 (1850 ± 10 Ma) was responsible for (1) syn-anatectic lateral flow and exhumation of the orogenic root and (2) folding of the middle and upper parts of the orogenic wedge that consequently acquired a fan-type geometry. The late D3 (1830 ± 10 Ma) and D4 (1810 ± 10 Ma) events are related to late-orogenic normal and strike-slip shearing, respectively. In our present state of knowledge, the Paleoproterozoic Trans-North China Orogen might be regarded as the assemblage of two continent-continent collisional belts, both of which are characterized by nappe stacking accommodated by top-to-the E/SE ductile shearing. Continental subduction, crustal thickening, partial melting of overthickened crust, exhumation of HP rocks and deposition of syn-orogenic detrital basins are typical features of modern collisional-type orogens.
ISSN: 0301-9268

Droits : info:eu-repo/semantics/OpenAccess
insu-00628119
https://hal-insu.archives-ouvertes.fr/insu-00628119
https://hal-insu.archives-ouvertes.fr/insu-00628119/document
https://hal-insu.archives-ouvertes.fr/insu-00628119/file/Trap-PrecambrianResearch-2011.pdf
DOI : 10.1016/j.precamres.2011.09.008

Éditeur(s) : Pergamon-elsevier Science Ltd
Résumé : We report rare earth element (REE) and neodymium (Nd) isotope data for the organic fraction of sediments collected from various depositional environments, i.e. rivers (n=25), estuaries (n=18), open-ocean settings (n=15), and cold seeps (n=12). Sedimentary Organic Matter (SOM) was extracted using a mixed hydrogen peroxide/nitric acid solution (20%-H2O2 – 0.02M-HNO3), after removal of carbonate and oxy-hydroxide phases with dilute hydrochloric acid (0.25M-HCl). A series of experimental tests indicate that extraction of sedimentary organic compounds using H202 may be complicated occasionally by partial dissolution of sulphide minerals and residual carbonates. However, this contamination is expected to be minor for REE because measured concentrations in H2O2 leachates are about two-orders of magnitude higher than in the above mentioned phases. The mean REE concentrations determined in the H2O2 leachates for samples from rivers, estuaries, coastal seas and open-ocean settings yield relatively similar levels, with ΣREE = 109 ± 86 ppm (mean ± s; n=58). The organic fractions leached from cold seep sediments display even higher concentration levels (285 ± 150 ppm; mean ± s; n=12). The H2O2 leachates for most sediments exhibit remarkably similar shale-normalized REE patterns, all characterized by a mid-REE enrichment compared to the other REE. This suggests that the distribution of REE in leached sedimentary organic phases is controlled primarily by biogeochemical processes, rather than by the composition of the source from which they derive (e.g. pore, river or sea- water). The Nd isotopic compositions for organic phases leached from river sediments are very similar to those for the corresponding detrital fractions. In contrast, the SOM extracted from marine sediments display εNd values that typically range between the εNd signatures for terrestrial organic matter (inferred from the analysis of the sedimentary detrital fractions) and marine organic matter (inferred from the analysis of local surface seawater). A notable exception is the case of organic matter (OM) fractions leached from cold seep sediment samples, which sometimes exhibit εNd values markedly different from both terrigenous and surface seawater signatures. This suggests that a significant fraction of organic compounds in these sediments may be derived from chemosynthetic processes, recycling pore water REE characterized by a distinct isotopic composition. Overall, our results confirm that organic matter probably plays an important role in the oceanic REE budget, through direct scavenging and remineralization within the water column. Both the high REE abundances and the shape of shale-normalized patterns for leached SOM also suggest that OM degradation in sub-surface marine sediments during early diagenesis could control, to a large extent, the distribution of REE in pore waters. Benthic fluxes of organic-bound REE could hence substantially contribute to the exchange processes between particulates and seawater that take place at ocean margins. Neodymium isotopes could provide useful information for tracing the origin (terrestrial versus marine) and geographical provenance of organic matter, with potential applications in paleoceanography. In particular, future studies should further investigate the potential of Nd isotopes in organic compounds preserved in sedimentary records for reconstructing past variations of surface ocean circulation.
Geochimica Et Cosmochimica Acta (0016-7037) (Pergamon-elsevier Science Ltd), 2014-09 , Vol. 140 , P. 177-198

Droits : 2014 Elsevier Ltd. All rights reserved.
http://archimer.ifremer.fr/doc/00191/30250/28682.pdf
DOI:10.1016/j.gca.2014.05.016
http://archimer.ifremer.fr/doc/00191/30250/

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Reef positions record the interaction between eustasy and tectonics, and have been used worldwide to characterize vertical deformations of upper-plates at different time-scales and constrain the seismic behavior of megathrusts. Along the Lesser Antilles volcanic arc, high-resolution marine geophysical data were collected on the 2–20 km wide eastern Martinique reef platform to reconstruct its stratigraphic and morphologic history, and understand the influence of local normal faulting, volcanism and plate-scale subduction processes on Holocene and Late Pleistocene reef development. The subsiding Martinique platform's stratigraphy is composed of multiple superimposed sea-level highstand deposits separated by subaerial exposure surfaces of sea-level low stands. The carbonate platform consists of two laterally-extensive carbonate units (unit U2 overlying unit U3) that extend to the platform edge to a depth of − 95 m MSL (mean sea level), and form two morphologic terraces, M2 and M3 respectively. The landward portion of unit U2 is partially overlain between 0 and − 60 m MSL by the living reef tract U1. The current reef is composed of a landward fringing reef, a lagoon and a seaward barrier reef, the latter forming a double-bank barrier around the Caravelle Peninsula. In near-shore multi-channel seismic profiles, a distinct reflector at ~− 35 m MSL, probably a subaerial exposure surface E1, separates the reef sequence formed during the last transgression from a Pleistocene fossil reef tract forming unit U2. Offshore of Mount Pelée volcano (Late Pleistocene), the Holocene reef did not develop above unit U2, whose upper surface is incised by channels and apparent sinkholes. During the Holocene transgression, the possibility of excessive turbidity due to volcanic activity may have inhibited reef development in this area. The un-dated unit U2 probably developed 120–130 ka ago during the last interglacial (MIS 5.5) + 6 m MSL highstand as thick, extensive reefs deposited all along the Lesser Antilles arc. Due to subsidence, MIS 5.5 reefs are not represented by onshore facies, except along the southern Sainte Anne Peninsula where normal faulting and uplift balances island-scale subsidence. Based on unit U2's present elevation and assuming an MIS 5.5 age and + 6 m MSL sea level, Martinique has subsided at maximum 0.3 m/ky, likely due to subduction processes that question the coupling state of the megathrust.
ISSN: 0025-3227

hal-01307036
https://hal.archives-ouvertes.fr/hal-01307036
DOI : 10.1016/j.margeo.2015.08.001

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Alpine Corsica consists of a stack of variably metamorphosed units of continental and Tethys-derived rocks. It represents an excellent example of high-pressure (HP) orogenic belt, such as the Western Alps, exposed over a small and accessible area. Compared to the Western Alps, the geology of Alpine Corsica is poorly unraveled. During the 1970s-80s, based on either lithostratigraphic or metamorphic field observations, various classifications of the belt have been proposed, but these classifications have been rarely matched together. Furthermore, through time, the internal complexity of large domains has been progressively left aside in the frame of large-scale geodynamic reconstructions. As a consequence, major open questions on the internal structure of the belt have remained unsolved. Apart from a few local studies, Alpine Corsica has not benefited of modern developments in petrology and basin research. This feature results in several uncertainties when combining lithostratigraphic and metamorphic patterns and, consequently, in the definition of an exhaustive architecture of the belt. In this paper we provide a review on the geology of Alpine Corsica, paying particular attention to the available lithostratigraphic and metamorphic classifications of the metamorphic terranes. These data are completed by a new and exhaustive metamorphic dataset obtained by means of thermometry based on Raman Spectroscopy of Carbonaceous Material (RSCM). This technique provides reliable insights on the peak temperature of the metamorphic history for CM-bearing metasediments. A detailed metamorphic characterization of metasediments, which have been previously largely ignored due to retrogression or to the lack of diagnostic mineralogy, is thus obtained and fruitfully coupled with the available lithostratigraphic data. Nine main tectono-metamorphic units are defined, from subgreenschist (ca. 280-300 °C) to the lawsonite-eclogite-facies (ca. 500-550 °C) condition. These units are homogeneous in metamorphism, laterally continuous and have characteristic lithostratigraphic features. This study also suggests a direct link between the pre-orogenic extensional setting and the present-day compressional structure of Alpine Corsica, indicating that large sections of subducted lithosphere were subducted and exhumed as coherent domains. These features provide important insight on the mechanism of stacking and exhumation of HP rocks, and make Alpine Corsica a unique reference for mountain-building processes in Tethyan-type orogens.
ISSN: 0012-8252

hal-00814433
https://hal.archives-ouvertes.fr/hal-00814433
DOI : 10.1016/j.earscirev.2012.10.003

Éditeur(s) : Elsevier Science Bv
Résumé : The late Quaternary paleoceanography and paleoenvironment in the Okinawa Trough, East China Sea, have been well reconstructed over the last decade, while in contrast the provenance of terrigenous sediments that have accumulated there remains enigmatic. In this study, rare earth elements (REE) were used to investigate provenance changes in sediments from Core DGKS9604, taken from the middle Okinawa Trough. Discrimination plots based on REE fractionation parameters suggest that the cored sediments have variable provenances over the last 30 ka, with the lower part (ca. 31-8.2 ka) ultimately originating mostly from the Changjiang (Yangtze River) and the upper part (7.1-0 ka) primarily from Taiwan. During the Last Glacial Maximum and early deglacial period, sea level was low and the main stream of the Kuroshio Current was deflected to the east of the Ryukyu Islands. As a result the Changjiang-derived sediments might have dominated sedimentation of the middle Okinawa Trough. However, since about 7 ka the main stream of the Kuroshio Current strengthened in the area of the trough, as sea level approximated the modern position. This caused near-bottom transport of fine-grained sediments from the continental margin to the trough to become weak and instead, Taiwan-derived terrigenous sediments dominated in the middle trough. The changing provenances of terrigenous sediments into the middle Okinawa Trough are closely related to the evolution of oceanic circulation and sea level in the East China Sea. Two tephra layers in the core have distinct REE compositions and correlate well with two volcanic eruptions at 7.6 and 25.8 ka in southern Japan. (C) 2010 Published by Elsevier B.V.
Marine Geology (0025-3227) (Elsevier Science Bv), 2010-09 , Vol. 275 , N. 1-4 , P. 212-220

Droits : 2010 Published by Elsevier B.V.
http://archimer.ifremer.fr/doc/00013/12459/9402.pdf
DOI:10.1016/j.margeo.2010.06.002
http://archimer.ifremer.fr/doc/00013/12459/

Éditeur(s) : HAL CCSD
Résumé : In a recent study based on a retrospective reconstruction of growth, we showed for Cecropia sciadophylla that branching and flowering processes, as well as alternation of long and short nodes were regularly spaced by ~23 nodes. We also found that this strong periodicity was related to an annual cycle of growth. Adult trees are successful individuals that have reached the canopy and our previous results were found in adult trees, suggesting that variability in the number of nodes produced per year is underestimated, because the degree of variation decreases with age. Here, we hypothesized that growth periodicity could be related to rainfall and we focus on two C. sciadophylla populations with contrasting precipitation seasonality. During 19 months and for 69 saplings, we measured growth at regular monthly intervals to test the intra-annual variability in the number of nodes produced per month and per year. We also characterized the intra-annual fluctuations in the number of present leaves in the main axis and internode lengths among months. We found that node elongation and number of present leaves in the main axis vary among months in the population subjected to a strong seasonal precipitation. In contrast, the population subjected to a non-seasonal precipitation showed smaller variation in node elongation and no variation in the number of leaves presented in the main axis among months. Regardless the population of origin, we also found that ~23 was the number of nodes produced per year and that the time required to produce a new node was ~15 days at any month of the year. The strong stability in the average number of nodes produced per month and per year among populations, suggests a genetically controlled trait. In spite of a strong genetic determination on the number of nodes produced per year, several environmental factors, including rainfall, could be the cause of the observed variation in elongation and number of present leaves in the main axis.INRAUM2
Botany 2010
Rhode Island, United States

hal-01191343
https://hal.archives-ouvertes.fr/hal-01191343
PRODINRA : 178581

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
In pre-drift reconstructions, the central and southern parts of the Borborema Province, northeastern Brazil, belong to a large Brasiliano-Pan-African orogenic realm situated to the north of the São Francisco-Congo Craton. In order to better understand the timing and geodynamic setting under which this orogenic system developed, a structural, geochemical and geochronological study was conducted across the east Pernambuco shear zone (EPSZ) system, which separates the Pernambuco-Alagoas Domain (PEAL) from the Central Domain. A sample of the Pinhões orthogneiss (GE-1), in the Central Domain, one sample of a syenitic orthogneiss (CA-34) wrapped by the EPSZ, and one sample of orthogneiss named Altinho (CA-40), in the northern portion of the PEAL, were dated by LA-ICP-MS. The Pinhões orthogneiss yielded an age of 869 ± 9 Ma, interpreted as the emplacement age of the protolith during a late Tonian magmatic episode. Samples CA-40 and CA-34 yielded 206Pb/238U weighted mean ages of 652 ± 6 Ma and 636 ± 3 Ma, respectively, which are interpreted as dating emplacement and crystallization of the magmatic protoliths. However, it is also possible that these rocks were formed during the same magmatic event in view of the identical ages of 646 ± 13 Ma and 646 ± 11 Ma, respectively, given by the less precise upper intercept of the discordia lines. The metaluminous and magnesian nature of the Altinho orthogneiss is akin to the calc-alkalic suite. However, some samples plot in the intraplate field in tectonic discrimination diagrams and the Nd TDM model age of 1.36 Ga is unlike that of juvenile magmas in convergent settings. The Altinho orthogneiss is quite similar in terms of trace elements geochemistry to the syenitic orthogneiss, which has a clearer intraplate affinity, and the dated samples have identical initial Sr isotope ratios (0.7047). Therefore, emplacement in an extensional setting is preferred over a convergent one. Two samples of paragneisses (SB-1 and BB-9) from the PEAL were also dated. The ages of the youngest zircon grains in sample BB-9 (655–642 Ma) overlap the crystallization age of the Altinho orthogneiss, implying that sedimentation is younger than or, at best, synchronous with magmatism. The age of low Th/U grains in samples CA-34 (615 ± 8 Ma) and SB-1 (587 ± 12 Ma) are related to a subsequent metamorphic overprint, which is loosely constrained between 580 and 620 Ma. These observations, combined with evidence provided by previous studies, suggest that the change from an extensional to a contracional setting occurred at ca. 640–630 Ma. In contrast with most collisional orogens, where a long period of oceanic subduction precedes collision, the inferred tectonic evolution suggests that the Brasiliano Orogeny resulted from inversion of continental and/or proto oceanic rifts.
ISSN: 0895-9811

hal-01174182
https://hal.archives-ouvertes.fr/hal-01174182
DOI : 10.1016/j.jsames.2014.06.004

Éditeur(s) : HAL CCSD BMJ Publishing Group
Résumé : International audience
OBJECTIVES: Social position and social mobility are associated with cancer incidence and mortality, yet little is known about their association with mediating factors such as occupational exposures to carcinogens. Our aim was to assess the association between the type of professional trajectory and multiple occupational exposure profiles. METHOD: Data were extracted from the Giscop93 study (n = 1 009), which is a cohort of cancer patients with (mainly) respiratory tumours. Job histories were reconstructed through interview, then a multi-disciplinary expert group examined the probability of occupational exposure to a list of 54 potentially carcinogenic agents. The typology of professional trajectories was built based on employment stability, employment continuity, job qualification trend, and multiple skills through Multiple Correspondence Analysis followed by Ascending Hierarchical Classification. Association with multiple-exposure profiles was then assessed through multiple logistic regression. RESULTS: Men and women differed in terms of predominant job category over the lifecourse (68,2% of blue-collar-workers among men, 57,3% of employees among women, p extless 0.0001). Professional trajectories were grouped in four classes as "stable qualified, employee" (21,3%), "stable manual, independent blue-collar-worker" (24,4%), "stable tiring, no gain in qualification" (30,5%), and "very unstable, precarious" (23,8%). Among men, the last two categories were associated with exposure to at least five different occupational carcinogens (ORstable_tiring/stable_qualified=2,0 [1,3;3,1], ORvery_unstable/stable_qualified=2,6 [1,6;4,2]). No such association was found among women. CONCLUSIONS: The association found between the type of professional trajectory and multiple occupational exposures among men should be replicated among people not suffering cancer. Forthcoming analysis will investigate the gendered differences observed.
ISSN: 1351-0711

hal-01063899
https://hal.archives-ouvertes.fr/hal-01063899
DOI : 10.1136/oemed-2014-102362.266

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
The Karukéra spur is an easternmost submerged rise of the Lesser Antilles fore-arc in the Guadeloupe archipelago, culminating about 4000 m above the fore-arc basin 150 km west of the deformation front. The analysis of 3500 km 2D high-resolution multichannel seismic reflection and multibeam bathymetric data, and the study of 14 core samples, allow for the first time to reconstruct its sedimentary anatomy and tectonic evolution. Seven seismic units (US1 to US7) are evidenced, organised into four major depositional sequences separated by erosional surfaces. Units US1 to US4 thicken to the south-southeast on the spur. The sedimentary deposits rest upon a deeply eroded metamorphic basement of the Caribbean Plate as in La Désirade Island. Sequence 1 (units US1 and US2) remains unknown in its lower part because it does not outcrop. Its upper part comprises early Miocene shallow water carbonates. Sequence S2 (Unit US3) only comprises an upper Miocene transgressive systems tract deposited into basinal environment. It is bounded by major erosional surfaces SB2 and SB3. Sequence 3 (US4 to US6) is Zanclean to Pleistocene. It is dominantly composed of shallow water, reefal deposits. Sequence 4 corresponds to recent deposits. The Karukéra spur experienced three main extensional episodes with alternations between uplift and subsidence periods. Uplifts are responsible for emersions and erosions. Subsidence severely drowned shallow water deposits. The first extensional episode led to the formation of horsts and grabens in the basement, prior to early Miocene deposits. The second extensional episode occurred during upper Miocene, in accordance with data in surrounding islands. The third tectonic episode developed since Calabrian. Noticeable is the constant reactivation of N130°–N150°, N150°–N180° and N40° trending faults since early Miocene and the neoformation of E–W trending faults since Calabrian. Our results suggest that at the latitude of Guadeloupean archipelago the Lesser Antilles subduction zone is an erosional margin because of the successive sweepings of the Santa Lucia then Tiburon Ridges.
ISSN: 0025-3227

hal-01172231
https://hal.archives-ouvertes.fr/hal-01172231
DOI : 10.1016/j.margeo.2015.02.007

Éditeur(s) : HAL CCSD
Résumé : The effects of climate change on extreme events are difficult to assess because extremes present large variability and consequently, it is difficult to identify significant trends in relation to the lack of instrumental long time series. Here we present a record of these extreme storm events in the French Mediterrannean coast over the past 7000 years based on a long sediment core from lagoonal environment in Gulf of Lions. Using a high resolution multiproxies approach on core associating grain size, faunal to reconstruct Mid to Late Holocene history of backbarrier deposits in relation to landfalling activity. Even if change in lagoon geomorphological setting over the Holocene does not allow to compare storm events in terms of intensity trough time, we have recorded six periods of increase in storm activity at 6200, 5500, 4400, 3200, 1500 yr cal B.P. and over the LIA (450 and 100 yr cal B.P.). These evidences of changes in coastal hydrodynamic, inversely correlated to periods of aridification in Western Mediterranean region, are in phase with those observed over the North Atlantic and correspond to Holocene cooling events. This increase in storm activity during Holocene cold events over Mediterranean region was probably due to thermal gradient increase leading to enhanced lower tropospheric baroclinicity over a large Central Atlantic-European domain. This study demonstrates that temperatures in North Atlantic region influence the severe storm activity and therefore the Mediterranean climate at Holocene timescale.
Les effets du changement climatique sur les événements extrêmes sont difficiles à estimer car ces phénomènes présentent une large variabilité, et par conséquent il est délicat d'identifier des tendances significatives compte tenu de l'absence de longues séries de données instrumentales. Dans cette étude, nous présentons un enregistrement de ces tempêtes extrêmes sur la côte Méditerranéenne française au cours des 7000 dernières années à partir de carottes sédimentaires prélevées dans un système lagunaire du Golfe du Lion. L'utilisation d'une approche multi-traceur à haute résolution avec des analyses granulométriques, faunistiques, géochimiques (XRF), en minéraux argileux associées à des données chronologiques de radiocarbone et de 210Pb, 137Cs ; nous a permis de reconstruire l'histoire, au cours de l'Holocène, des dépôts lagunaires en relation avec l'activité des tempêtes. Bien que les paramètres morphologiques de cet environnement lagunaire aient changé durant l'Holocène, ne permettant pas de comparer ces événements au cours du temps en terme d'intensité, nous enregistrons six périodes d'augmentation de l'activité des tempêtes datées à 6200, 5500, 4400, 3200, 1500 an cal B.P. et durant le Petit Age Glaciaire (de 450 à 100 an cal B.P.). Ces changements de l'activité hydrodynamique côtière, en antiphase avec les périodes d'aridifications en Méditerranée de l'Ouest, sont corrélées avec celles observées dans le bassin Nord Atlantique et correspondent aux événements de refroidissement Holocène. L'augmentation de l'activité des tempêtes dans la cette région de la Méditerranée durant les périodes froides, associée à une diminution des températures au pôle Nord, est probablement liée à l'augmentation du gradient thermique qui, par interaction barocline, favorise les cycles d'évolution des tempêtes dans toute l'Europe et la Méditerranée de l'Ouest. Cette étude démontre ainsi que la température dans la région Nord Atlantique influence l'activité des tempêtes extrêmes et donc du climat Méditerranéen à l'échelle de l'Holocène.
https://tel.archives-ouvertes.fr/tel-00437757

tel-00437757
https://tel.archives-ouvertes.fr/tel-00437757
https://tel.archives-ouvertes.fr/tel-00437757/document
https://tel.archives-ouvertes.fr/tel-00437757/file/Sabatier_these.pdf