Éditeur(s) : HAL CCSD Taylor & Francis
Résumé : International audience
Introduction: Drug transporters are now recognized as major players involved in pharmacokinetics and toxicology. Methods for assessing their activity are important to consider, particularly owing to regulatory requirements with respect to inhibition of drug transporter activity and prediction of drug–drug interactions. In this context, the use of fluorescent-dye-based transport assays is likely to deserve attention.Areas covered: This review provides an overview of the nature of fluorescent dye substrates for ATP-binding cassette and solute carrier drug transporters. Their use for investigating drug transporter activity in cultured cells and clinical hematological samples, drug transporter inhibition, drug transporter imaging and drug transport at the organ level are summarized.Expert opinion: A wide range of fluorescent dyes is now available for use in various aspects of drug transporter studies. The use of these dyes for transporter analyses may, however, be hampered by classic pitfalls of fluorescence technology, such as quenching. Transporter-independent processes such as passive diffusion of dyes through plasma membrane or dye sequestration into subcellular compartments must also be considered, as well as the redundant handling by various distinct transporters of some fluorescent probes. Finally, standardization of dye-based transport assays remains an important on-going issue
ISSN: 1742-5255

hal-01162381
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01162381
DOI : 10.1517/17425255.2015.1053462
PUBMED : 26050735

Éditeur(s) : HAL CCSD Royal Society of Chemistry
Résumé : International audience
Abstract View references (60)Here we show the long term performance at high temperatures of a multi-tube module containing 8 membranes in 4 parallel lines with a total of 545 cm 2 area. The membranes were prepared via thin film dip coating of cobalt oxide silica (CoO xSi) sol-gel on tubular alumina supports. A preliminary study found that the sol-gel containing 20 mol% cobalt oxide formed the best microporous structure with the highest surface area and pore volume. All resulting membranes delivered permeances of ∼1 × 10 -7 mol m -2 s -1 Pa -1 at 500 °C, indicating a high repeatability for the membrane fabrication process. The permselectivities of helium (He) and hydrogen (H 2) over carbon dioxide (CO 2) and nitrogen (N 2) increased from 10-20 at 100 °C to values close to 1000 at 500 °C. Additionally, the apparent energies of activation (E act) for the smaller kinetic diameter gases He and H 2 at 12.2 and 19.5 kJ mol -1 were high and contrary to the negative values for larger gases N 2 and CO 2 at -1.8 and -7.4 kJ mol -1. These remarkable results were attributed to the molecular sieving mechanism of the microporous silica which was enhanced by the embedding of cobalt oxide into the matrix, delivering structural control with an average pore size of 3 Å. The E act for H 2 permeance was higher than that of He, indicating that the cobalt oxide played an important role in H 2 transport. Two membrane lines performed exceptionally well for binary gas mixture processing with H 2 purity reaching values close to 100% in the permeate stream for argon (Ar) concentrations of up to 80% in the retentate stream. A major finding here is that the binary gas selectivity was independent of temperature, contrary to the permselectivity observed for single gas permeance. Further, the H 2 flow rate was greatly affected by the concentration of Ar in the mixture, while the temperature dependency played only a marginal role. In particular, competitive adsorption in the percolative pathways containing pore constrictions or bottlenecks of the anisotropic CoO xSi matrix allowed Ar to impede H 2 diffusion. Finally, the CoO xSi membranes proved thermally stable and robust for 2000 h of testing for various thermal cycles up to 500 °C. © The Royal Society of Chemistry 2012.
Energy & Environmental Science

hal-01683199
https://hal.univ-antilles.fr/hal-01683199
DOI : 10.1039/c2ee03247c

Éditeur(s) : HAL CCSD
Résumé : International audience
AIM:We aimed to study the relationships between circulating 25-hydroxyvitamin D [25(OH)D], insulin resistance and leptin-to-adiponectin (L/A) ratio in Guadeloupean children and adolescents and to analyse the changes in 25(OH)D levels after a 1-year lifestyle intervention program.METHODS:25(OH)D concentrations were measured via a chemiluminescence assay. Cardiometabolic risk factors, homoeostasis model assessment of insulin resistance (HOMA-IR), and adipokines were measured. The lifestyle intervention included dietary counselling, regular physical activity.RESULTS:Among 117 girls and boys (11–15 years old, 31.6% obese), 40% had vitamin D deficiency (25(OH)D levels < 20 ng/mL). With linear regression models where 25(OH)D and HOMA-IR acted as independent variables and age, sex, BMI, L/A ratio as covariates, 25(OH)D was significantly associated with HOMA-IR alone (P = 0.036). HOMA-IR was also associated with BMI z-score ≥ 2, L/A ratio and an interaction term BMI z-score ≥ 2*L/A ratio (P < 0.001 for all). After one year, in 78 children/adolescent, mean serum 25(OH)D increased significantly from 21.4 ± 4.9 ng/mL at baseline to 23.2 ± 6.0 after 1 year; P = 0.003 whereas BMI z-score, HOMA-IR and L/A ratio decreased significantly (P = 0.003, P < 0.001 and P = 0.012; respectively).CONCLUSION:The association between 25(OH)D and HOMA-IR, independently of obesity and the high prevalence of vitamin D deficiency should be considered in order to prevent the later incidence of T2DM. A healthy lifestyle including non-sedentary and outdoor activities could be a way for improving vitamin D status.
Open Access Macedonian Journal of Medical Sciences

hal-01427889
http://hal.upmc.fr/hal-01427889
PUBMEDCENTRAL : PMC5175505

Éditeur(s) : HAL CCSD BioMed Central
Résumé : International audience
BACKGROUND: The aryl hydrocarbon receptor (AhR) has gradually emerged as a regulator of inflammation in the lung and other tissues. AhR may interact with the p65-subunit of the nuclear factor (NF)-κB transcription factors, but reported outcomes of AhR/NF-κB-interactions are conflicting. Some studies suggest that AhR possess pro-inflammatory activities while others suggest that AhR may be anti-inflammatory. The present study explored the impact of AhR and its binding partner AhR nuclear translocator (Arnt) on p65-activation and two differentially regulated chemokines, CXCL8 (IL-8) and CCL5 (RANTES), in human bronchial epithelial cells (BEAS-2B). RESULTS: Cells were exposed to CXCL8- and CCL5-inducing chemicals, 1-nitropyrene (1-NP) and 1-aminopyrene (1-AP) respectively, or the synthetic double-stranded RNA analogue, polyinosinic-polycytidylic acid (Poly I:C) which induced both chemokines. Only CXCL8, and not CCL5, appeared to be p65-dependent. Yet, constitutively active unligated AhR suppressed both CXCL8 and CCL5, as shown by siRNA knock-down and the AhR antagonist α-naphthoflavone. Moreover, AhR suppressed activation of p65 by TNF-α and Poly I:C as assessed by luciferase-assay and p65-phosphorylation at serine 536, without affecting basal p65-activity. In contrast, Arnt suppressed only CXCL8, but did not prevent the p65-activation directly. However, Arnt suppressed expression of the NF-κB-subunit RelB which is under transcriptional regulation by p65. Furthermore, AhR-ligands alone at high concentrations induced a moderate CXCL8-response, without affecting CCL5, but suppressed both CXCL8 and CCL5-responses by Poly I:C. CONCLUSION: AhR and Arnt may differentially and independently regulate chemokine-responses induced by both inhaled pollutants and pulmonary infections. Constitutively active, unligated AhR suppressed the activation of p65, while Arnt may possibly interfere with the action of activated p65. Moreover, ligand-activated AhR suppressed CXCL8 and CCL5 responses by other agents, but AhR ligands alone induced CXCL8 responses when given at sufficiently high concentrations, thus underscoring the duality of AhR in regulation of inflammation. We propose that AhR-signaling may be a weak activator of p65-signaling that suppresses p65-activity induced by strong activators of NF-κB, but that its anti-inflammatory properties also are due to interference with additional pathways.
ISSN: 1478-811X

inserm-01085082
http://www.hal.inserm.fr/inserm-01085082
http://www.hal.inserm.fr/inserm-01085082/document
http://www.hal.inserm.fr/inserm-01085082/file/s12964-014-0048-8.pdf
PUBMED : 25201625

Éditeur(s) : Editions de l'ORSTOM
Résumé : A research programm on the marine green turtle Chelonia mydas nesting on the two major reproduction sites for the species in the Indian Ocean, conducled over last 15 years, included intensive tagging programm. Processing of these lagging data provides estimations of adult female populations {or each site and season from two independent methods. First classical method is the ratio of total number of nests produced over a define time on the mean individual number of nests by female during the same time (November, December, January). The computed mean individual number ranges from 3 to 3.5 obtained over 2 to 3 months. The second method is the multiple capture-recapture method (JOLLY, 1965; SEBER, 1965; MANLY, 1984). Il is an original tentative of applying this method for the daily estimation of females number on a nesting site. The results obtained suggest this method to be applied for the species on other sites and to other marine turtle species. Population estimates obtained by these two independent methods are coherent Roughly, the two populations through seasonal nesting activity appear in wealthy state with a mean estimation number of 850 to 1100 females for Tromelin and more variable eslimations ranging from 2000 lo 11 000 females by season for Europa, considering lhe three major nesting months: November to January
Un programme d'observations sur les populations de tortue verte marine Chelonia mydas pondant sur les deux sites de ponte majeurs de l'espèce dans l'océan Indien, Tromelin et Europa, comportait notamment un programme intensif de marquage. L'exploitation de ces données de marquage a permis de réaliser des estimations du nombre de femelles pondant sur chaque site par deux méthodes différentes. La première méthode est celle, classiquement utilisée, du rapport entre le nombre total de pontes déposées pour une période donnée et le nombre moyen de pontes par femelle durant le même temps. On démontre que le nombre moyen individuel de ponte est de l'ordre de 3 à 3,5 pontes par saison. La deuxième méthode est celle des estimations par marquages-recaptures multiples (J OLL Y -SEBER, 1965; MANLY, 1984). C'est une utilisation originale de cette méthode pour l'estimation journalière des populations de tortues femelles sur un site de ponte, qui doit pouvoir être appliquée sur d'autres sites pour la même espèce et pour d'autres espèces de tortues marines. Les résultats obtenus par ces deux méthodes différentes sont cohérents. Schématiquement, on peut conclure à deux populations abondantes de 850 à 1 ZOO femelles sur Tromelin par saison et des estimations moyennes variant de 2 000 à Il 000 tortues par saison pour l'ensemble des plages d'Europa pour les trois mois principaux de ponte par saison: novembre à janvier.
Océanographie tropicale (0245-9418) (Editions de l'ORSTOM), 1986 , Vol. 21 , N. 1 , P. 3-22

Droits : ORSTOM
http://archimer.ifremer.fr/doc/00113/22406/20103.pdf
http://archimer.ifremer.fr/doc/00113/22406/

Résumé : La conchyliculture connaît depuis une trentaine d'années une progression régulière de ses productions à travers le monde. Elle représente une activité économique importante avec plus de 240 000 tonnes de coquillage produit annuellement en France. Cependant le développement de cette activité peut être limité par des mortalités parfois massives dues à des maladies infectieuses. L'augmentation des productions peut être expliquée par l'amélioration des méthodes d'élevage grâce à une meilleure connaissance de la biologie des bivalves et des processus physiologiques liés à leur reproduction : l'apparition de l'élevage larvaire en écloserie a permis de pallier le caractère aléatoire et souvent insuffisant du captage naturel. Ces nouvelles techniques ont permis d'acquérir une certaine indépendance vis-à-vis des pontes naturelles, mais ont entraîné une augmentation des transferts d'animaux entre les bassins conchylicoles, une augmentation des densités de mollusques et le développement d'une espèce cible par bassin. Ces actions ont contribué à l'apparition et à la dissémination de nouvelles maladies entraînant de très fortes pertes pour la conchyliculture. De plus, la palourde, comme tous les mollusques marins, présente des caractéristiques biologiques qui laissent peu de possibilités d'actions pour protéger une production vis-à-vis de maladies infectieuses: la culture de ces espèces en milieu ouvert rend tout traitement impossible du fait des quantités de substance à utiliser, et de la forte probabilité de contamination des animaux. Cette méthode peut être appliquée dans le cas d'élevages intensifs : écloseries, nurseries. Le système immunitaire des mollusques est primitif, ils ne possèdent pas de lymphocytes B et lymphocytes T, ce qui empêche toute réponse immune spécifique et rend la vaccination impossible. L'absence d'anticorps spécifique complique la recherche d'agent pathogène, celle-ci n'est possible que par un diagnostic direct, essentiellement réalisé grâce à l'histologie ou à la microscopie.

Droits : 2006 IUT La Rochelle, Ifremer
http://archimer.ifremer.fr/doc/00033/14457/11759.pdf
http://archimer.ifremer.fr/doc/00033/14457/

Éditeur(s) : HAL CCSD Nature Publishing Group
Résumé : International audience
Cell death of hepatocytes is a prominent characteristic in the pathogenesis of liver disease, while hepatolysis is a starting point of inflammation in hepatitis and loss of hepatic function. However, the precise molecular mechanisms of hepatocyte cell death, the role of the cytokines of hepatic microenvironment and the involvement of intracellular kinases, remain unclear. Tumor necrosis factor alpha (TNF-α) is a key cytokine involved in cell death or survival pathways and the role of RIPK1 has been associated to the TNF-α-dependent signaling pathway. We took advantage of two different deficient mouse lines, the RIPK1 kinase dead knock-in mice (Ripk1K45A) and the conditional knockout mice lacking RIPK1 only in liver parenchymal cells (Ripk1LPC-KO), to characterize the role of RIPK1 and TNF-α in hepatitis induced by concanavalin A (ConA). Our results show that RIPK1 is dispensable for liver homeostasis under steady-state conditions but in contrast, RIPK1 kinase activity contributes to caspase-independent cell death induction following ConA injection and RIPK1 also serves as a scaffold, protecting hepatocytes from massive apoptotic cell death in this model. In the Ripk1LPC-KO mice challenged with ConA, TNF-α triggers apoptosis, responsible for the observed severe hepatitis. Mechanism potentially involves both TNF-independent canonical NF-κB activation, as well as TNF-dependent, but canonical NF-κB-independent mechanisms. In conclusion, our results suggest that RIPK1 kinase activity is a pertinent therapeutic target to protect liver against excessive cell death in liver diseases. © The Author(s) 2016.
ISSN: 2041-4889

hal-01414916
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01414916
DOI : 10.1038/cddis.2016.362
PUBMED : 27831558

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Endocrine disrupting chemicals and especially oestrogen receptor (ER) agonists have been extensively studied over the years due to their potential effects on sexual development and reproduction in vertebrates, notably fish. As ER agonists can exist as complex mixtures in the aquatic environment, evaluating the impact of combined exposure on oestrogenic effects has become increasingly important. Use of predictive models such as concentration addition (CA) and independent action (IA) has allowed assessment of combined estrogenic effects of complex multi-compound mixtures of ER agonists in various fish in vitro and in vivo experimental models. The present work makes use of a transgenic zebrafish strain, tg(cyp19a1b-GFP), which expresses the green fluorescent protein (GFP) under the control of the cyp19a1b (brain aromatase or aromatase B) gene to determine the oestrogenic potency of ER agonists alone or in mixtures. In these studies, tg(cyp19a1b-GFP) zebrafish embryos were exposed for four days (from one to five days post fertilization) to five different oestrogenic chemicals; 17α-ethinylestradiol (EE2), 17β-estradiol (E2), estrone (E1), bisphenol A (BPA) and 4-tert-octylphenol (OP), and three mixtures of up to four of these compounds. The mixture of BPA, OP and E2 was also tested with primary cultures of rainbow trout hepatocytes by analysing the ER-mediated induction of the oestrogenic biomarker vitellogenin in order to compare the performance of the two methods for assessing oestrogenic effects of complex mixtures. The three tested mixtures were predominantly acting in an additive manner on the expression of GFP. Additivity was indicated by the overlap of the 95% confidence interval of the concentration response curves for the observed data with the CA and IA prediction models, and model deviation ratios within a factor of two for a majority of the mixture concentrations. However, minor deviations determined as more than additive effects for the mixture of EE2, E1 and E2 and less than additive effects for the mixture of BPA, OP, EE2 and E1 were observed at the higher mixture concentrations tested. The successful prediction of additivity by CA and IA in tg(cyp19a1b-GFP) zebrafish embryos and deviations at high mixture concentrations seemed to correspond well to results obtained in the rainbow trout hepatocyte assay. The present results clearly show the usefulness of combining predictive modelling and use of in vitro bioassays for rapid screening of oestrogenic effects of complex mixtures and environmental samples.
ISSN: 0166-445X

hal-00877351
https://hal.archives-ouvertes.fr/hal-00877351
DOI : 10.1016/j.aquatox.2013.05.001
PUBMED : 23721851

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Estrogen receptor alpha (ERα) is generally considered to be a good prognostic marker because almost 70% of ERα-positive tumors respond to anti-hormone therapies. Unfortunately, during cancer progression, mammary tumors can escape from estrogen control, resulting in resistance to treatment. In this study, we demonstrate that activation of the actin/megakaryoblastic leukemia 1 (MKL1) signaling pathway promotes the hormonal escape of estrogen-sensitive breast cancer cell lines. The actin/MKL1 signaling pathway is silenced in differentiated ERα-positive breast cancer MCF-7 and T47D cell lines and active in ERα-negative HMT-3522 T4-2 and MDA-MB-231 breast cancer cells, which have undergone epithelial-mesenchymal transition. We showed that MKL1 activation in MCF-7 cells, either by modulating actin dynamics or using MKL1 mutants, down-regulates ERα expression and abolishes E2-dependent cell growth. Interestingly, the constitutively active form of MKL1 represses PR and HER2 expression in these cells and increases the expression of HB-EGF, TGFβ, and amphiregulin growth factors in an E2-independent manner. The resulting expression profile (ER-, PR-, HER2-) typically corresponds to the triple-negative breast cancer expression profile.
ISSN: 0303-7207

hal-01061363
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01061363
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01061363/document
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01061363/file/Activationsur the_MKL1actin_Kerdivel_et_al._text_Figures.pdf
DOI : 10.1016/j.mce.2014.03.009

Éditeur(s) : HAL CCSD Nature Publishing Group
Résumé : International audience
Collisional mountain belts grow as a consequence of continental plate convergence and eventuallydisappear under the combined effects of gravitational collapse and erosion. Using a decade ofGPS data, we show that the western Alps are currently characterized by zero horizontal velocityboundary conditions, offering the opportunity to investigate orogen evolution at the time ofcessation of plate convergence. We find no significant horizontal motion within the belt, but GPS andlevelling measurements independently show a regional pattern of uplift reaching ~2.5 mm/yr in thenorthwestern Alps. Unless a low viscosity crustal root under the northwestern Alps locally enhancesthe vertical response to surface unloading, the summed effects of isostatic responses to erosion andglaciation explain at most 60% of the observed uplift rates. Rock-uplift rates corrected from transientglacial isostatic adjustment contributions likely exceed erosion rates in the northwestern Alps. In theabsence of active convergence, the observed surface uplift must result from deep-seated processes.
ISSN: 2045-2322

hal-01357450
https://hal.archives-ouvertes.fr/hal-01357450
https://hal.archives-ouvertes.fr/hal-01357450/document
https://hal.archives-ouvertes.fr/hal-01357450/file/noquet2016.pdf
DOI : 10.1038/srep28404

Éditeur(s) : HAL CCSD Royal Society, The
Résumé : International audience
Bathymodiolin mussels occur at hydrothermal vents and cold seeps, where they thrive thanks to symbiotic associations with chemotrophic bacteria. Closely related genera Idas and Adipicola are associated with organic falls, ecosystems that have been suggested as potential evolutionary 'stepping stones' in the colonization of deeper and more sulphide-rich environments. Such a scenario should result from specializations to given environments from species with larger ecological niches. This study provides molecular-based evidence for the existence of two mussel species found both on sunken wood and bones. Each species specifically harbours one bacterial phylotype corresponding to thioautotrophic bacteria related to other bathymodiolin symbionts. Phylogenetic patterns between hosts and symbionts are partially congruent. However, active endocytosis and occurrences of minor symbiont lineages within species which are not their usual host suggest an environmental or horizontal rather than strictly vertical transmission of symbionts. Although the bacteria are close relatives, their localization is intracellular in one mussel species and extracellular in the other, suggesting that habitat choice is independent of the symbiont localization. The variation of bacterial densities in host tissues is related to the substrate on which specimens were sampled and could explain the abilities of host species to adapt to various substrates.
ISSN: 0950-1193

hal-00755293
https://hal.univ-antilles.fr/hal-00755293
DOI : 10.1098/rspb.2008.1101

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
In the southeastern corner of the Tyrrhenian basin, in the central Mediterranean Sea, a tight alignment of earthquakes along a well-defined Benioff zone marks one of the narrowest active trenches worldwide, where one of the last fragment of the former Tethys ocean is consumed. Seismic tomography furnishes snapshot images of the present-day position of this slab, and seismic anisotropy allows to reconstruct the past kinematics of the subduction process. Using seismic anisotropy fast directions as a proxy for the present and past mantle flow, we look backward for the seismic traces of the slab motion through the western-central Mediterranean mantle, from the starting locus of subduction toward its present day position. The result of combining independent data sets provides a coherent pattern of anisotropy that illustrates an example of slab rollback from its initiation point to its present-day position.
ISSN: 0012-821X

hal-01389115
http://hal.univ-reunion.fr/hal-01389115
http://hal.univ-reunion.fr/hal-01389115/document
http://hal.univ-reunion.fr/hal-01389115/file/Lucente_medit_EPSL2006_hal.pdf
DOI : 10.1016/j.epsl.2005.10.041

Éditeur(s) : HAL CCSD Geological Society of America
Résumé : International audience
On the New Jersey shelf (offshore North America), the presence of pore water fresher than seawater is known from a series of boreholes completed during the 1970s and 1980s. To account for this fresh water, a fi rst hypothesis involves possible present-day active dynamic connections with onshore aquifers, while a second involves meteoritic and/or sub- ice-sheet waters during periods of lowered sea level. Expedition 313 drilled three boreholes on the middle shelf, offering a unique opportunity for the internal structure of the siliciclastic system to be accessed, at scales ranging from the depositional matrix to the continental margin. This enables the stratigraphic architecture to be correlated with the spatial distribution and salinity of saturating fl uids. Expedition 313 revealed both very low salinities (<3 g/L) at depths exceeding 400 m below the seafl oor and evidence for a multilayered reservoir organization, with freshand/ or brackish-water intervals alternating vertically with salty intervals. In this study we present a revised distribution of the salinity beneath the middle shelf. Our observations suggest that the processes controlling salinity are strongly infl uenced by lithology, porosity, and permeability. Saltier pore waters generally occur in coarse-grained intervals and fresher pore waters occur in fi ne-grained intervals. The transition from fresher to saltier intervals is often marked by cemented horizons that probably act as permeability barriers. In the lowermost parts of two holes, the salinity varies independently of lithology, suggesting different mechanisms and/or sources of salinity. We present an interpretation of the sedimentary facies distribution, derived from core, logs, and seismic profi le analyses, that is used to discuss the marginscale two-dimensional reservoir geometry and permeability distribution. These proposed geometries are of primary importance when considering the possible pathways and emplacement mechanisms for the fresh and salty water below the New Jersey shelf.
EISSN: 1553-040X

insu-00858241
https://hal-insu.archives-ouvertes.fr/insu-00858241
DOI : 10.1130/GES00855.1

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : International audience
Studies on the periodicity of wood formation provide essential data on tree age and factors related to the control of tree growth. The aim of this work was to investigate the cambial phenology and its relation with leaf phenology and climatic seasonality in two tropical rainforest species belonging to the genus Parkia known for having a contrasted leaf phenology. From wood samples collected at 15 day intervals from April 2009 to February 2012 in five trees of both species, we quantified cambial activity by counting layers of cells in cambial zone, enlarging cells zone and wall thickening cells zone from wood prepared anatomical micro sections. In the same time, we observed leaf shedding behaviors in the crown of the studied trees. In both species, cambial activity was significantly reduced during leafless period. However, the cambial activity of P. velutina was not affected by seasonality while in P. nitida, we found a significant positive effect of the dry season on cambial activity. This diminution of activity associated to leaf shedding occurred annually during the dry season in P. nitida whereas the trees were not synchronous in time for P. velutina. On the contrary that is often admitted, the rest cambial period can be independent of environmental restriction such as dry season. Leaf phenology remains the best proxy to estimate cambial activity.
ISSN: 0931-1890

hal-01135166
https://hal.archives-ouvertes.fr/hal-01135166
https://hal.archives-ouvertes.fr/hal-01135166/document
https://hal.archives-ouvertes.fr/hal-01135166/file/Art_Morel_al_Seasonal_variations_phenological_traits_2015.pdf
DOI : 10.1007/s00468-015-1177-4

Éditeur(s) : Springer
Résumé : The light response curve methodology for microphytobenthic biofilms was studied by comparing the two most usual approaches used in pulse amplitude modulated (PAM) fluorometry. The non-sequential light curve (N-SLC) method is characterized by independent measures of the photosynthetic activity across a light gradient whereas the rapid light curve (RLC) method consists of successive measures on the same sample exposed to a stepwise increase of light intensities. Experiments were carried out on experimental microphytobenthic biofilms prepared from natural assemblages and acclimated to dark conditions. In preliminary experiments, N-SLCs were constructed from fluorescence induction curves performed at 12 different photon flux densities (PFDs). A minimum of 50 s of illumination was necessary to reach a stable light response curve; shorter illumination times resulted in underestimating the physiological parameters (alpha the light utilization coefficient in light-limited conditions and rETR(max) the maximum rate of photosynthesis efficiency) of the light response curve. For the comparison between N-SLCs and RLCs, the same time of illumination (50 s) was used for each light step of RLCs so that N-SLCs differed from RLCs only by the way the amount of light was delivered, i.e., a light dose accumulation for RLC. The experimental results showed the difference between the two photobiological response curves. In the lower range of PFDs, RLCs exhibited a larger value of alpha; in this light-limited part of the response curve the incremental increase of PFDs limited the development of NPQ and resulted in a better optimization of electron transport rate for RLC. In the higher range of PFDs, the trend was reversed and the RLC showed a lower value of rETR(max) than the N-SLC did; this is attributed to the light dose accumulation which likely led to a more efficient dispersion of energy, as illustrated by a higher non-photochemical quenching (NPQ). In conclusion, these results confirm that parameters derived from both methods differ in their value and do not bear the same physiological information.
Marine Biology (0025-3162) (Springer), 2007-11 , Vol. 153 , N. 1 , P. 91-101

Droits : 2007 Springer
http://archimer.ifremer.fr/doc/2007/publication-3331.pdf
DOI:10.1007/s00227-007-0787-9
http://archimer.ifremer.fr/doc/00000/3331/

Éditeur(s) : HAL CCSD Nature Publishing Group
Résumé : International audience
Activation of cell signaling by reactive chemicals and pollutants is an important issue for human health. It has been shown that lipophilic nitro-benzoxadiazole (NBD) compounds rapidly move across the plasma membrane and enhance Epidermal Growth Factor Receptor (EGFR) tyrosine phosphorylation in cancer cells. Unlike ligand-dependent activation, the mechanism of this induction relies on the generation of hydrogen peroxide, which is involved in the activation of the catalytic site of the receptor and the inactivation of protein tyrosine phosphatase PTP-1B. Production of H2O2 during redox transformation of NBD compounds is associated with the transition of a monomeric form of Cu/Zn superoxide dismutase 1 (SOD1) to stable dimers. The highly stable and functionally active SOD1 dimer, in the absence of adequate activities in downstream reactions, promotes the disproportionate production and accumulation of intracellular hydrogen peroxide shortly after exposure to NBD compounds. The intrinsic fluorescence of small compounds was used to demonstrate their binding to SOD1. Our data indicate that H2O2 and concomitantly generated electrophilic intermediates behave as independent entities, but all contribute to the biological reactivity of NBD compounds. This study opens a promising path to identify new biomarkers of oxidative/electrophilic stress in the progression of cancer and other diseases
ISSN: 2045-2322

hal-01279094
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01279094
DOI : 10.1038/srep21088
PUBMED : 26883293

Éditeur(s) : HAL CCSD Hindawi Publishing Corporation
Résumé : During the 1982-1984 bradyseismic crises in the Campi Flegrei area (Italy), the University of Wisconsin deployed a network of seismological stations to record local earthquakes. In order to analyse the potential of the recorded data in terms of tomographic imaging, a blind test was recently set up and carried out in the framework of a research project. A model representing a hypothetical 3D structure of the area containing the Campi Flegrei caldera was also set up, and a synthetic dataset of time arrivals was in turn computed. The synthetic dataset consists of several thousand P- and S-time arrivals, computed at about fourteen stations. The tomographic inversion was performed by four independent teams using different methods. The teams had no knowledge of either the input velocity model or the earthquake hypocenters used to create the synthetic dataset. The results obtained by the different groups were compared and analysed in light of the true model. This work provides a thorough analysis of the earthquake tomography potential of the dataset recording the seismic activity at Campi Flegrei in the 1982-1984 period. It shows that all the tested earthquake tomography methods provide reliable low-resolution images of the background velocity field of the Campi Flegrei area, but with some differences. However, none of them succeeds in detecting the hypothetical structure details (i.e. with a size smaller than about 1.5-2 km), such as a magmatic chamber 4 km deep and especially the smaller, isolated bodies, which represent possible magmatic chimneys and intrusions.
ISSN: 1687-885X

hal-00795584
https://hal.archives-ouvertes.fr/hal-00795584
DOI : 10.1155/2012/505286

Éditeur(s) : HAL CCSD Public Library of Science
Résumé : International audience
Many studies have reported proliferative, differentiating or protective effects of estradiol, notably through estrogen receptor alpha (ERα). On the contrary, the ligand-independent action of ERα is currently poorly documented notably in cell protection. The stable transfection of wild type, substituted or truncated form of ERα in PC12 cells (ERα negative cell line) lead the specific study of its ligand-independent action. Hence, we demonstrate here that, in the absence of E2, the expression of ERα prevents cells from apoptosis induced by serum deprivation. This protection is not due to an ERE-mediated transcription and does not require either AF-1 or AF-2 transactivation functions. It is afforded to the Y537 residue of ERα and activation of c-Src/Stat3 signaling pathway.
ISSN: 1932-6203

inserm-00865332
http://www.hal.inserm.fr/inserm-00865332
http://www.hal.inserm.fr/inserm-00865332/document
http://www.hal.inserm.fr/inserm-00865332/file/PMID_23825704.pdf
DOI : 10.1371/journal.pone.0069081

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
The Gibraltar arc, spans a complex portion of the Africa-Eurasia plate boundary marked by slow oblique convergence and intermediate and deep focus seismicity. The seemingly contradictory observations of a young extensional marine basin surrounded by an arcuate fold-and-thrust belt, have led to competing geodynamic models (delamination and subduction). Geophysical data acquired in the past decade provide a test for these models and support a narrow east-dipping, subduction zone. Seismic refraction studies indicate oceanic crust below the western Gulf of Cadiz. Tomography of the upper mantle reveals a steep, east-dipping high P-wave velocity body, beneath Gibraltar. The anisotropic mantle fabric from SKS splitting shows arc-parallel "fast directions", consistent with toroidal flow around a narrow, westward retreating subducting slab. The accompanying WSW advance of the Rif-Betic mountain belt has constructed a thick pile of deformed sediments, an accretionary wedge, characterized by west-vergent thrust anticlines. Bathymetric swath‐mapping images an asymmetric embayment at the deformation front where a 2 km high basement ridge has collided. Subduction has slowed significantly since 5 Ma, but deformation of recent sediments and abundant mud volcanoes suggest ongoing activity in the accretionary wedge. Three possible origins for this deformation are discussed; gravitational spreading, overall NW-SE convergence between Africa and Iberia and finally a WSW tectonic push from slow, but ongoing roll-back subduction. In the absence of arc volcanism and shallow dipping thrust type earthquakes, evidence in favor of present-day subduction can only be indirect and remains the object of debate. Continued activity of the subduction offers a possible explanation for great (M > 8.5) earthquakes known to affect the area, like the famous 1755 Great Lisbon earthquake. Recent GPS studies show SW motion of stations in N Morocco at velocities of 3-6 mm/yr indicating the presence of an independent block, a "Rif-Betic-Alboran" microplate, situated between Iberia and Africa.
ISSN: 0040-1951

insu-00769762
https://hal-insu.archives-ouvertes.fr/insu-00769762
DOI : 10.1016/j.tecto.2012.08.038

Éditeur(s) : Public Library Science
Résumé : Background: Resolving threats to widely distributed marine megafauna requires definition of the geographic distributions of both the threats as well as the population unit(s) of interest. In turn, because individual threats can operate on varying spatial scales, their impacts can affect different segments of a population of the same species. Therefore, integration of multiple tools and techniques - including site-based monitoring, genetic analyses, mark-recapture studies and telemetry - can facilitate robust definitions of population segments at multiple biological and spatial scales to address different management and research challenges. Methodology/Principal Findings: To address these issues for marine turtles, we collated all available studies on marine turtle biogeography, including nesting sites, population abundances and trends, population genetics, and satellite telemetry. We georeferenced this information to generate separate layers for nesting sites, genetic stocks, and core distributions of population segments of all marine turtle species. We then spatially integrated this information from fine-to coarse-spatial scales to develop nested envelope models, or Regional Management Units (RMUs), for marine turtles globally. Conclusions/Significance: The RMU framework is a solution to the challenge of how to organize marine turtles into units of protection above the level of nesting populations, but below the level of species, within regional entities that might be on independent evolutionary trajectories. Among many potential applications, RMUs provide a framework for identifying data gaps, assessing high diversity areas for multiple species and genetic stocks, and evaluating conservation status of marine turtles. Furthermore, RMUs allow for identification of geographic barriers to gene flow, and can provide valuable guidance to marine spatial planning initiatives that integrate spatial distributions of protected species and human activities. In addition, the RMU framework - including maps and supporting metadata - will be an iterative, user-driven tool made publicly available in an online application for comments, improvements, download and analysis.
Plos One (1932-6203) (Public Library Science), 2010-12 , Vol. 5 , N. 12 , P. -

Droits : 2010 Plos One
http://archimer.ifremer.fr/doc/00028/13926/11308.pdf
DOI:10.1371/journal.pone.0015465
http://archimer.ifremer.fr/doc/00028/13926/