Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Despite the importance of invertebrate resources for Pacific coral reef islands, few studies have specifically addressed the effects of harvesting on invertebrate assemblages including targeted and non-targeted species. The impacts of recreational harvesting on reef and seagrass invertebrate assemblages in New Caledonia (South Pacific) are investigated by comparing communities in non-MPA and MPA areas. Sampling was done using a standard core method on seagrasses and by visual survey along belt transects on reefs. A total of 371 species were recorded, 174 on seagrasses and 254 on reefs, with 57 common species. Reef and seagrass invertebrate communities were very different in MPA and non-MPA areas. On both habitats, MPAs were identified as undisturbed areas while non-MPAs were defined as moderately disturbed with a predominance of small-sized and opportunistic species. Fishing not only affects target species but also non-target species through secondary effects. These results highlight the necessity of a community based approach for the conservation of resources in tropical poorly known environments.
ISSN: 0165-7836

hal-01311486
http://hal.univ-reunion.fr/hal-01311486
http://hal.univ-reunion.fr/hal-01311486/document
http://hal.univ-reunion.fr/hal-01311486/file/Harvesting%20effects%20on%20tropical%20invertebrate%20assemblages%20in%20New_hal.pdf
DOI : 10.1016/j.fishres.2015.02.001

Éditeur(s) : HAL CCSD Public Library of Science
Résumé : International audience
Understanding the factors underlying the spatio-temporal distribution of infectious diseases provides useful information regarding their prevention and control. Dengue fever spatio-temporal patterns result from complex interactions between the virus, the host, and the vector. These interactions can be influenced by environmental conditions. Our objectives were to analyse dengue fever spatial distribution over New Caledonia during epidemic years, to identify some of the main underlying factors, and to predict the spatial evolution of dengue fever under changing climatic conditions, at the 2100 horizon. We used principal component analysis and support vector machines to analyse and model the influence of climate and socio-economic variables on the mean spatial distribution of 24,272 dengue cases reported from 1995 to 2012 in thirty-three communes of New Caledonia. We then modelled and estimated the future evolution of dengue incidence rates using a regional downscaling of future climate projections. The spatial distribution of dengue fever cases is highly heterogeneous. The variables most associated with this observed heterogeneity are the mean temperature, the mean number of people per premise, and the mean percentage of unemployed people, a variable highly correlated with people's way of life. Rainfall does not seem to play an important role in the spatial distribution of dengue cases during epidemics. By the end of the 21st century, if temperature increases by approximately 3°C, mean incidence rates during epidemics could double. In New Caledonia, a subtropical insular environment, both temperature and socio-economic conditions are influencing the spatial spread of dengue fever. Extension of this study to other countries worldwide should improve the knowledge about climate influence on dengue burden and about the complex interplay between different factors. This study presents a methodology that can be used as a step by step guide to model dengue spatial heterogeneity in other countries.
ISSN: 1935-2727

Droits : http://creativecommons.org/licenses/by/
pasteur-01247037
https://hal-riip.archives-ouvertes.fr/pasteur-01247037
https://hal-riip.archives-ouvertes.fr/pasteur-01247037/document
https://hal-riip.archives-ouvertes.fr/pasteur-01247037/file/journal.pntd.0004211.pdf
DOI : 10.1371/journal.pntd.0004211

Éditeur(s) : HAL CCSD Public Library of Science
Résumé : International audience
The scleractinian coral Pocillopora damicornis type β is known to present a mixed reproduction mode: through sexual reproduction, new genotypes are created, while asexual reproduction insures their propagation. In order to investigate the relative proportion of each reproduction mode in P. damicornis type β populations from Reunion Island, Indian Ocean, clonal propagation along the west coast was assessed through four sampling sites with increasing geographical distance between sites. Coral colonies were sampled either exhaustively, randomly or haphazardly within each site, and genotypic diversity was assessed using 13 microsatellite loci over a total of 510 P. damicornis type β determined a posteriori from their mtDNA haplotype (a 840 bp sequenced fragment of the Open Reading Frame). Overall, 47% of all the sampled colonies presented the same multi-locus genotype (MLG), a superclone, suggesting that asexual propagation is extremely important in Reunion Island. Within each site, numerous MLGs were shared by several colonies, suggesting local clonal propagation through fragmentation. Moreover, some of these MLGs were found to be shared among several sites located 40 km apart. While asexual reproduction by fragmentation seems unlikely over long distances, our results suggest a production of parthenogenetic larvae. Despite shared MLGs, two differentiated clusters were enclosed among populations of the west coast of Reunion Island, revealing the necessity to set up appropriate managing strategies at a local scale.
ISSN: 1932-6203

hal-01450078
http://hal.univ-reunion.fr/hal-01450078
DOI : 10.1371/journal.pone.0169692

Éditeur(s) : HAL CCSD National Shellfisheries Association
Résumé : International audience
Monitoring gonad maturation for protandrous and functional hermaphrodite species such as the giant clam Tridacna maxima is difficult due to the juxtaposition and relative proportion of male and female tissues in the gonad [gonadal sex ratio (GSR)]. Here, the relevance of the widely used gonadosomatic index (GSI) as proxy of giant clam gonad maturation is tested with a large dataset (n ¼ 265). Gonadosomatic index is compared with other indices, namely the proportion of the male part harboring spermatozoids, the proportion of empty oocyte follicles, the mean oocyte diameter, and the oocyte elongation. At gonad scale, high index variability highlighted partial spawning. At individual scale, male and female maturation proxies were contrasted, showing either asynchronous emissions of male and female gametes or contrasted spermatogenesis and oogenesis duration. The GSI was mostly driven by the number and diameter of oocytes and therefore it is recommended here as primary proxy for female maturity. Except for the oocyte elongation, all indices were affected by the GSR, which ruled out drawing conclusions at population scale. These results highlight the need for maturation stage proxies that are optimized for functional hermaphrodite species.
ISSN: 0730-8000

hal-01613648
https://hal.archives-ouvertes.fr/hal-01613648
https://hal.archives-ouvertes.fr/hal-01613648/document
https://hal.archives-ouvertes.fr/hal-01613648/file/Gaertner-Mazouni-2016-eio.pdf
DOI : 10.2983/035.035.0107

Éditeur(s) : HAL CCSD Oxford University Press (OUP)
Résumé : International audience
The newly-desribed Centropyge cocosensis has long been considered a variant of the lemonpeel pygmy angelfish C. flavissima because of their overall similarity in color patterns. DiBattista and co-authors [J. Hered. 107 (2016) 647–653] recently contested the validity of C. cocosensis, based on arguments that are challenged here.
ISSN: 0022-1503

ird-01525431
http://hal.ird.fr/ird-01525431
http://hal.ird.fr/ird-01525431/document
http://hal.ird.fr/ird-01525431/file/Letter%20to%20Editor_JHered%20p%20haL.pdf
DOI : 10.1093/jhered/esx008

Éditeur(s) : HAL CCSD Springer-Verlag
Résumé : International audience
With hull-mounted multibeam echosounder data, wereport for the first time along the active Ecuadorian margin,acoustic signatures of water column fluid emissions and seep-relatedstructures on the seafloor. In total 17 flare-shaped acousticanomalies were detected from the upper slope (1250 m) to the shelfbreak (140 m). Nearly half of the flare-shaped acoustic anomaliesrise 200–500 m above the seafloor. The base of the flares is generallyassociated with high-reflectivity backscatter patchescontrasting with the neighboring seafloor. We interpret these flaresas caused by fluid escape in the water column, most likely gases.High-resolution seismic profiles show that most flares occur closeto the surface expression of active faults, deformed areas, slopeinstabilities or diapiric structures. In two areas tectonic deformationdisrupts a Bottom Simulating Reflector (BSR), suggesting thatburied frozen gas hydrates are destabilized, thus supplying free gasemissions and related flares. This discovery is important as it opensthe way to determine the nature and origin of the emitted fluids andtheir potential link with the hydrocarbon system of the forearcbasins along the Ecuadorian margin.
ISSN: 0033-4533

insu-01267238
https://hal-insu.archives-ouvertes.fr/insu-01267238
DOI : 10.1007/s00024-015-1230-7

Éditeur(s) : HAL CCSD
https://hal.archives-ouvertes.fr/hal-01629922

hal-01629922
https://hal.archives-ouvertes.fr/hal-01629922

Éditeur(s) : HAL CCSD Instituto Oswaldo Cruz, Ministério da Saúde
Résumé : International audience
Leishmania are protozoan parasites that show remarkable diversity, as revealed by the various clinical forms of leishmaniasis,which can range from mild skin lesions to severe metastatic cutaneous/mucosal lesions. The exact nature andextent of Leishmania phenotypic diversity in establishing infection is not fully understood. In order to try to understandsome aspects of this diversity, we subcutaneously infected BALB/c mice with first and second generation subclones of aL. amazonensis strain isolated from a patient (BA125) and examined in vivo lesion growth rate and antimony susceptibility.In vivo fast-, medium- and slow-growing subclones were obtained; moreover, fast-growing subclones could generateslow-growing subclones and inversely, revealing the continuous generation of diversity after passage into mice. Noantimony-resistant subclone appeared, probably a rare occurrence. By tagging subclone cells with a L. amazonensisgenomic cosmid library, we found that only a very small number of founding cells could produce lesions. Leishmaniaclones transfected with in vivo selected individual cosmids were also diverse in terms of lesion growth rate, revealing thecosmid-independent intrinsic characteristics of each clone. Our results suggest that only a few of the infecting parasitesare able to grow and produce lesions; later, within the cell mixture of each lesion, there coexist several parasite populationswith different potentialities to grow lesions during the next infection round. This may reflect a sort of programmedheterogeneity of individual parasites, favoring the survival of some individuals in various environmental conditions.
ISSN: 0074-0276

hal-01557855
https://hal-univ-perp.archives-ouvertes.fr/hal-01557855
DOI : 10.1590/0074-02760160280

Éditeur(s) : HAL CCSD Biopress Limited
Résumé : International audience
Obligately epizoic diatoms (Bacillariophyta) on vertebrates were first described from cetaceans, but turtles, both freshwater and marine, also host very specific floras. Several scrapings of juvenile Chelonia mydas have allowed the description of two new diatom taxa whose valves are asymmetrical about the transapical axis, Tripterion societatis sp. nov. and Chelonicola caribeana sp. nov. These taxa are very small and show some morphological plasticity. Such plasticity might suggest their inclusion in genera with slightly different characteristics from Tripterion and Chelonicola as originally delimited. Based on our observations, an emended diagnosis is proposed for Chelonicola.
ISSN: 2159-8347

hal-01500418
https://hal.archives-ouvertes.fr/hal-01500418
DOI : 10.1080/0269249X.2017.1299042

Éditeur(s) : HAL CCSD Springer
Résumé : International audience
With the development of genetics methods, it becomes possible to study the population structure and some aspects of the reproductive behaviour of endangered sharks. Here we describe the isolation of 20 polymorphic microsatellite markers in the bull shark Carcharhinus leucas (Carcharhinidae) and their characteristics. Two to 10 alleles per locus were detected. Observed and expected heterozygosities ranged from 0.00 to 0.78 and from 0.05 to0.80, respectively. Four markers showed deviations from Hardy–Weinberg equilibrium; among them, three showed presence of null alleles. No linkage disequilibrium was detected among any of the loci. Moreover, four, 11 and 19 of these 20 markers successfully cross-amplified in the tiger shark Galeocerdo cuvier, the sandbar shark Carcharhinus plumbeus and the dusky shark Carcharhinus obscurus, respectively.
ISSN: 1877-7252

hal-01253773
https://hal.archives-ouvertes.fr/hal-01253773
https://hal.archives-ouvertes.fr/hal-01253773/document
https://hal.archives-ouvertes.fr/hal-01253773/file/Pirog%20et%20al.%20-%202015%20-%20Isolation%20and%20characterization%20of%2020%20microsatellit_hal.pdf
DOI : 10.1007/s12686-014-0308-3

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Despite the increasing dominance of turf algae in coral reefs, few studies have investigated their physiological and ecological responses to changes in abiotic factors. We tested the effects of depth and ultraviolet radiation on turf algae at different levels of successional stages using two experiments. Depth-related differences were found for all turf algal communities, characterized by a higher amount of the cyanobacteria taxon Dichothrix and the red filamentous genera Poly-/Herposiphonia in the shallow and the appearance of oscillating cyanobacteria in deeper waters. In the first experiment, cross-depth transplantation of 153 days old communities influenced percentage cover, biomass and taxa composition. Downward transplantation lowered overall biomass and abundance of the foraminifera Sorites, whereas the crustose green alga Pringsheimiella and filamentous cyanobacteria colonized the communities. A nearly reverse pattern was observed in upward transplanted communities. Overall we distinguished between sensitive taxa, like Oscillatoria, and taxa able to acclimate to alterations in their environment, like Pringsheimiella, Poly/Herposiphonia and Dichothrix. In the second experiment, algae grown for 285 days at 5 m were exposed together with a set of sterile settlement tiles to three UVR regimes at 2 m for 22 days. UVR had no effect on turf algal communities regardless of successional stage. This study highlights the presence of high light and UV tolerant species. The high UV tolerance of turf communities may confer a competitive advantage over other more sensitive coral reef biota, such as corals. This study demonstrates that turf algae are dynamic communities exhibiting species-specific resistance to environmental changes.
ISSN: 0022-0981

hal-01333486
https://hal-univ-perp.archives-ouvertes.fr/hal-01333486
DOI : 10.1016/j.jembe.2014.07.017

Éditeur(s) : HAL CCSD Paris : Muséum national d'histoire naturelle
Résumé : International audience
Coral reefs are one of the most diverse ecosystems on Earth and sustain millions of people worldwide.However, coral reefs are temporally dynamic and fragile systems subject to ever increasing disturbancesof anthoropogenic and natural origins. Understanding the patterns and trajectories of changes through time isurgently needed to estimate the resilience of coral reefs. To ascertain these patterns, we depend on the availabilityof long-term datasets, which are seldom available. In this study, we present the data set which allowed us to analysethe long-term trends of coral and fish assemblages for the island of Moorea (French Polynesia) from 1983to 2014, a dataset spanning 32 years, comprising two Acanthaster planci outbreaks (1987 and 2006) and severalhurricanes (1982, 1983, 1991 and 2010), on three permanent monitoring sites (quadrats of 50 × 2 m2) located onboth fringing and barrier reefs as well as on the outer slope. Coral cover oscillated significantly over time, particularlyon the outer slope where it suffered greatly from the effects of A. planci outbreaks and hurricanes. Totalfish and commercial fish abundances varied significantly across the three habitats. Prior to 2000, both total fishand herbivorous fish abundances increased on the barrier reef while after this time, numbers began to drop significantlyalong the outer slope. Species richness for total, commercialized and herbivorous fish increased over thesampling period for all three habitats. There were varied responses amongst species to disturbances on the outerslope over the sampling period: while some tended to disappear for a while before reappearing, others showed apeak in abundance in the middle of the sampling period, and still others increased or decreased continuously orwere stable over time. Our results support the view that coral reefs are highly dynamic systems and that differentfunctional groups show different temporal trajectories. While disturbance is probably the major driver for coralcover dynamics, its impact is less obvious for fish, possibly due to their mobility and population dynamics whichmay mask the effect of disturbance.
Les récifs coralliens sont des systèmes dynamiques et diversifiés régulièrement soumis à des perturbationsnaturelles et anthropiques, sources d’hétérogénéité spatiale et temporelle dans la structure et la dynamique deces communautés d’organismes que sont, entre autres, les poissons et les coraux. Récemment, il a été démontréque les activités humaines pouvaient modifier les régimes naturels de perturbations des récifs coralliens en transformantles événements ponctuels en perturbations persistantes ou en stress chronique, soit en introduisant denouveaux types de perturbations, soit en ajoutant ou altérant certaines perturbations naturelles nécessaires au bonmaintien de la dynamique inhérente aux récifs. Dans cette étude, nous présentons la base de données qui nouspermettra d’analyser les tendances à long-terme des assemblages de poissons et de coraux de l’île de Moorea(Polynésie française) entre 1983 et 2014 sur une période de 32 ans, comprenant deux proliférations d’Acanthasterplanci (1987 et 2006) et plusieurs cyclones (1982, 1983, 1991 et 2010), sur trois sites de suivi permanents(quadrats de 50 × 2 m2) sur les récifs barrière et frangeant ainsi que sur la pente externe. La couverture corallienneprésente de fortes oscillations, en particulier sur la pente externe où elle a répondu fortement à la proliférationd’A. planci et des cyclones. Les abondances des poissons totaux et des poissons commercialisés montrent destendances contrastées sur les trois habitats, avec, plus particulièrement, une augmentation sur le récif barrière etune diminution sur la pente externe après 2000. Ces tendances se retrouvent chez les poissons herbivores dansces deux habitats. La richesse spécifique des poissons totaux, commerciaux et herbivores, augmente de façoncontinue au cours de la période d’étude dans les trois habitats. Des groupes particuliers d’espèces répondentdifféremment aux perturbations de la pente externe au cours du suivi : alors que certaines espèces ont tendanceà disparaître pendant quelques années avant de réapparaître, d’autres présentent un pic en terme d’abondanceen milieu de suivi ; d’autres espèces ont des abondances qui augmentent ou diminuent de façon continue, etd’autres encore montrent des abondances stables. Ceci indique que les récifs coralliens sont des systèmes trèsdynamiques dans lesquels les perturbations naturelles peuvent affecter les espèces de façon différente. Alors quele régime de perturbations naturelles semble être important pour la dynamique de la couverture corallienne danscertains habitats, cela se retrouve beaucoup moins pour les poissons. Cette atténuation des fluctuations spatialeset temporelles peut être due aux aptitudes de dispersion de nombreuses espèces de poissons, capables de chercherun autre habitat favorable en cas de perturbation de l’habitat corallien d’origine.
ISSN: 0399-0974

hal-01282378
https://hal-univ-perp.archives-ouvertes.fr/hal-01282378

Éditeur(s) : HAL CCSD The Company of Biologists
Résumé : International audience
The ability to produce sound has been known for decades inBalistidae. Sounds of many species have been recorded and a varietyof sound-producing mechanisms have been proposed, includingteeth stridulation, collision of the buccal teeth and movements of thefins. The best-supported hypothesis involves movements of thepectoral fin against the lateral part of the swimbladder, called adrumming membrane. In this study, we describe for the first time thesounds made by the blackbar triggerfish Rhinecanthus aculeatus,which are like short drum rolls with an average duration of 85 ms,193 Hz dominant frequency and 136 dB SPL level at 3 cm distance.The sounds are a series of pulses that result from alternate sweepingmovements of the right and left pectoral fins, which push a system ofthree scutes that are forced against the swimbladder wall. Pulses fromeach fin occur in consecutive pairs. High-speed videos indicate thateach pulse consists of two cycles. The first part of each cyclecorresponds to the inward buckling of the scutes, whereas the secondpart of the cycle corresponds to an apparent passive recoil of thescutes and swimbladder wall. This novel sound productionmechanism is probably found in many members of Balistidaebecause these peculiar scutes occur in other species in the family.Comparison of sound characteristics from fishes of different sizesshows that dominant frequency decreases with size in juveniles butnot in adults.KEY WORDS: Acoustic, Communication, Swimbladder
ISSN: 00220949

hal-01472506
https://hal-univ-perp.archives-ouvertes.fr/hal-01472506
DOI : 10.1242/jeb.146514

Éditeur(s) : HAL CCSD Instituto Oswaldo Cruz, Ministério da Saúde
Résumé : International audience
Leishmania are protozoan parasites that show remarkable diversity, as revealed by the various clinical forms of leishmaniasis, which can range from mild skin lesions to severe metastatic cutaneous/mucosal lesions. The exact nature and extent of Leishmania phenotypic diversity in establishing infection is not fully understood. In order to try to understand some aspects of this diversity, we subcutaneously infected BALB/c mice with first and second generation subclones of a L. amazonensis strain isolated from a patient (BA125) and examined in vivo lesion growth rate and antimony susceptibility. In vivo fast-, medium- and slow-growing subclones were obtained; moreover, fast-growing subclones could generate slow-growing subclones and inversely, revealing the continuous generation of diversity after passage into mice. No antimony-resistant subclone appeared, probably a rare occurrence. By tagging subclone cells with a L. amazonensis genomic cosmid library, we found that only a very small number of founding cells could produce lesions. Leishmania clones transfected with in vivo selected individual cosmids were also diverse in terms of lesion growth rate, revealing the cosmid-independent intrinsic characteristics of each clone. Our results suggest that only a few of the infecting parasites are able to grow and produce lesions; later, within the cell mixture of each lesion, there coexist several parasite populations with different potentialities to grow lesions during the next infection round. This may reflect a sort of programmed heterogeneity of individual parasites, favoring the survival of some individuals in various environmental conditions.
ISSN: 0074-0276

hal-01489008
https://hal-univ-perp.archives-ouvertes.fr/hal-01489008

Éditeur(s) : HAL CCSD
Résumé : International audience
Cumulative human impacts have led to the degradation of marine ecosystems and thedecline of biodiversity in the European and contiguous seas. Effective conservationmeasures are urgently needed to reverse these trends. Conservation must entail societalchoices, underpinned by human values and worldviews that differ between the countriesbordering these seas. Social, economic and political heterogeneity adds to the challenge ofbalancing conservation with sustainable use of the seas. Comprehensive macro-regionalcoordination is needed to ensure effective conservation of marine ecosystems andbiodiversity of this region. Under the European Union Horizon 2020 framework programme,the MarCons COST action aims to promote collaborative research to support marinemanagement, conservation planning and policy development. This will be achieved bydeveloping novel methods and tools to close knowledge gaps and advance marineconservation science. This action will provide support for the development of macro-regional and national policies through six key actions: to develop tools to analysecumulative human impacts; to identify critical scientific and technical gaps in conservationefforts; to improve the resilience of the marine environment to global change and biologicalinvasions; to develop frameworks for integrated conservation planning across terrestrial,freshwater, and marine environments; to coordinate marine conservation policy acrossnational boundaries; and to identify effective governance approaches for marine protectedarea management. Achieving the objectives of these actions will facilitate the integration ofmarine conservation policy into macro-regional maritime spatial planning agendas for theEuropean and contiguous seas, thereby offsetting the loss of biodiversity and ecosystemservices in this region.
Research Ideas and Outcomes

hal-01474085
https://hal-univ-perp.archives-ouvertes.fr/hal-01474085
https://hal-univ-perp.archives-ouvertes.fr/hal-01474085/document
https://hal-univ-perp.archives-ouvertes.fr/hal-01474085/file/RIO_article_11884.pdf
DOI : 10.3897/rio.3.e11884

Éditeur(s) : HAL CCSD Pacific-credo Publications
Résumé : International audience
Les sciences humaines et sociales dans le Pacifique Sud, terrain questions et méthodes

ISBN : 978-2-9537485-2-9
hal-01342961
https://hal-univ-perp.archives-ouvertes.fr/hal-01342961

Éditeur(s) : HAL CCSD BioMed Central
Résumé : International audience
Urinary tract infections are bacterial infections most commonly encountered in the community. The resistance rate of uropathogens to commonly prescribed antibiotics has increased worldwide but there are no published data concerning the resistance of strains isolated from community-acquired UTI in Guadeloupe. To assess the susceptibility patterns of Enterobacteriaceae strains isolated from outpatients in Guadeloupe we conducted a prospective study from December 2012 to May 2014 among outpatients consulting at private and public laboratories for urine analysis. Risk factors for E. coli resistance to amoxicillin, third-generation cephalosporin, and ciprofloxacin were also determined. To study the trends of E. coli resistance rates over the past 10 years, data on the susceptibility patterns of E. coli from 2003 to 2014 were also collected from three major laboratories for a retrospective study. During the prospective study, we isolated 1293 bacterial strains from the urine of outpatients presenting for urine analysis. The most commonly isolated bacteria were E. coli (57 %) and Klebsiella pneumoniae (15.5 %). Thirty seven per cent of the E. coli strains were resistant to amoxicillin. Resistance rates to third generation cephalosporin were low for E. coli and other Enterobacteriaceae (3.1 and 12.2 % respectively) and mostly due to the presence of an Extended Spectrum Beta-lactamase. Resistance to cotrimoxazole and ciprofloxacin was moderate (17.8 and 15.6 % respectively). However, the resistance rate of E. coli to ciprofloxacin has significantly increased during the last 10 years. Risk factors were consistent with previously reported data, especially for the increasing ciprofloxacin resistance with age. General practitioners in Guadeloupe need to be better informed to favor the prescription of fosfomycin-trometamol to reduce the risk of resistance to fluoroquinolones.
ISSN: 1471-2180

Droits : http://creativecommons.org/licenses/by/
pasteur-01351191
https://hal-riip.archives-ouvertes.fr/pasteur-01351191
https://hal-riip.archives-ouvertes.fr/pasteur-01351191/document
https://hal-riip.archives-ouvertes.fr/pasteur-01351191/file/art%253A10.1186%252Fs12866-016-0749-9.pdf
PUBMED : 27342199

Éditeur(s) : HAL CCSD Cambridge University Press
Résumé : International audience
Genetic variation was examined in two complex cases of Indo-Pacific pygmy angelfishes (genus Centropyge; Pomacanthidae). The lemonpeel pygmy angelfish C. flavissima (Cuvier and Valenciennes) has a geographically disjunct Indian vs. Pacific distribution and the individuals from these two regions differ by their colour patterns. Previous research on C. flavissima has shown mitochondrial introgression from two related species, C. eibli in the eastern Indian Ocean and C. vrolikii in the Pacific Ocean. Using the 16S rDNA and the CO1 gene as phylogeographic markers, we found no mitochondrial haplotypes in common between Indian Ocean C. flavissima and C. eibli, confirming partial genetic isolation, albeit recent. Also, we found substantial genetic differences between Indian and Pacific C. flavissima populations at the nuclear ETS-2 intron locus. The Indian Ocean form of C. flavissima, thus geographically isolated by >2000 km distance from its Pacific Ocean counterpart, is described as a new species, Centropyge cocosensis sp. nov. Centropyge cocosensis sp. nov. differs in appearance from C. flavissima in having a conspicuous blue iris and a fainter, bluish eye ring. We also found that the yellow pygmy angelfish C. heraldi Woods and Schultz consists of two genetically distinct entities, one distributed widely in the northern tropical Indo-West Pacific, the other distributed in the southern Pacific Ocean. The name originally given to the blackfin pygmy angelfish, C. woodheadi Kuiter, is here resurrected to designate the latter.
EISSN: 1755-2672

hal-01340521
https://hal-univ-perp.archives-ouvertes.fr/hal-01340521
DOI : 10.1007/s12526-016-0509-y

Éditeur(s) : HAL CCSD Magnolia Press
Résumé : International audience
A new species of wrasse, Macropharyngodon pakoko, is described from the Marquesas Islands, bringing the total number of species of the genus Macropharyngodon to 12. Macropharyngodon pakoko was found at depths from 0-42 m and is endemic to the Marquesas Islands. Macropharyngodon pakoko is similar to M. meleagris, which is widely distributed from the central and western Pacific to Cocos-Keeling in the Indian Ocean, but differs genetically and in several coloration characters: males with irregularly curved black humeral blotch with incomplete iridescent blue border; inverted irregular " U "-shaped band on the cheek; a small black spot at the upper base of the pectoral fin; and background color of the body greenish with faint bluish black spots on each scale. Females lack black pigment on the chest posterior to the ventral attachment of the gill membranes; reddish black blotches on the body are widely spaced, particularly on the head where they are more reddish and half the size of those on body; caudal fin with small, bright yellow spots arranged in narrow vertical bands with pale interspaces; pelvic fins pale with three reddish yellow cross-bands; a small black spot at the upper base of the pectoral fin; and small reddish spots along the base of the anal fin. Juveniles have irregular black blotches on the body, a small black spot instead of an ocellus posteriorly on the dorsal fin and lack large black spots and ocellus on the anal fin.
ISSN: 1175-5326

Droits : http://creativecommons.org/licenses/by/
hal-01333340
https://hal-univ-perp.archives-ouvertes.fr/hal-01333340
https://hal-univ-perp.archives-ouvertes.fr/hal-01333340/document
https://hal-univ-perp.archives-ouvertes.fr/hal-01333340/file/7387-23089-2-PB.pdf
DOI : 10.11646/zootaxa.3857.3.6

Éditeur(s) : HAL CCSD Elsevier Masson
Résumé : International audience
In vertebrates, brain functional asymmetries are widespread and increase brain performance. Some species of fishes are known to have brain asymmetries; however, little information is available on brain lateralization in coral reef fishes and the impact this could have during the recruitment phase. In this study, soldierfish, Myripristis pralinia, at the larval and juvenile stage recognized conspecifics through visual cues. Larvae with the ablation of either the right or left telencephalic hemisphere lost the attraction towards conspecific cues. In contrast, juveniles with the ablation of the right (but not left) telencephalic hemisphere still displayed a preference towards conspecific visual cues. These results suggest the left telencephalic hemisphere is responsible for the lateralization process used in the visual recognition of coral reef fish juveniles. The determinism of lateralized perception of conspecifics during fish ontogeny may be a consequence of genetic factors, linked with the metamorphosis processes and/or environmental factors such as predation at recruitment.
ISSN: 0003-3472

hal-01340504
https://hal-univ-perp.archives-ouvertes.fr/hal-01340504
DOI : 10.1016/j.anbehav.2016.04.011