Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
The full numerical simulation of turbulent flows in the context of industrial applications remains a very challenging problem. One of the difficulties is the presence of a large number of interacting scales of different orders of magnitude, ranging from the macroscopic scale to the Kolmogorov dissipation scale. In order to better understand and simulate these interactions, new algorithms of incremental type have recently been introduced, stemming from the theory of infinite-dimensional dynamical systems (see, e.g., the algorithms of Foias, Jolly et al. (1988), Foias, Manley and Temam (1988), Laminie et al. (1993, 1994), Marion and Temam (1989, 1990), and Temam (1990)). These algorithms are based on decompositions of the unknown functions into a large- and a small-scale component, one of the underlying ideas being to approximate the corresponding attractor. In the context of finite element methods, the decomposition of a solution into small- and large-scale components appears when we consider hierarchical bases (Yserentant, 1986; Zienkiewicz et al., 1982). In the present article we derive several estimates of the size of the structures for the linear and nonlinear terms which correspond to interactions of different hierarchical components of the velocity field, and also their time variation. The one-step time variation of these terms can be smaller than the expected accuracy of the computation. Using this remark, we implement an adaptive spatial and temporal multilevel algorithm which treats differently the small- and large-scale components of the flow. We derive several a priori estimates in order to study the perturbation introduced into the approximated equations. All the interaction terms between small- and large-scale structures are frozen during several time steps. Finally, we implement the multilevel method in order to simulate a bidimensional flow described by the Burgers equations. We perform a parametric study of the procedure and its efficiency. The gain in CPU time is significant and the trajectories computed by our multi-scale method remain close to the trajectories obtained with the classical Galerkin method.
ISSN: 0168-9274

hal-00730710
https://hal.archives-ouvertes.fr/hal-00730710

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
We investigated the response of the crystal structure, lattice parameters, and unit-cell volume of hydrous layered silicate phlogopite at conditions relevant to subduction zone settings. We have used first principles simulation based on density functional theory to calculate the equation of state and full elastic constant tensor. Based on the generalized gradient approximation, the full single crystal elastic constant tensor with monoclinic symmetry shows significant anisotropy with the compressional elastic constants: c11 = 181 GPa, c22 = 185 GPa, c33 = 62 GPa, the shear elastic constants c44 = 14 GPa, c55 = 20 GPa, c66 = 68 Ga, and c46 = −6 GPa; the off diagonal elastic constants c12 = 48 GPa, c13 = 12 GPa, c23 = 12 GPa, c15 = −16 GPa, c25 = −5 GPa and c35 = −1 GPa at zero pressure. The elastic anisotropy of phlogopite is larger than most of the layered hydrous phases relevant in the subduction zone conditions. The shear anisotropy, AVS for phlogopite is ∼77% at zero pressure condition and although it decreases upon compression it remains relatively high compared to other hydrous phases relevant in the subduction zone settings. We also note that the shear elastic constants for phlogopite are relatively low. Phlogopite also has a high isotropic bulk VP/VS ratio ∼2.0. However, the VP/VS ratio also exhibits significant anisotropy with values as low as 1.49. Thus, phlogopite bearing metasomatized mantle could readily explain unusual VP/VS ratio as observed from seismological studies from the mantle wedge regions of the subduction zone.
ISSN: 0031-9201

hal-01115670
https://hal.archives-ouvertes.fr/hal-01115670
DOI : 10.1016/j.pepi.2014.05.004

Éditeur(s) : HAL CCSD American Physical Society
Résumé : 1 tex, 16 figures
International audience
We make use of a subtraction procedure, introduced to overcome double--counting problems in beyond--mean--field theories, in the second random--phase--approximation (SRPA) for the first time. This procedure guarantees the stability of SRPA (so that all excitation energies are real). We show that the method fits perfectly into nuclear density--functional theory. We illustrate applications to the monopole and quadrupole response and to low--lying $0^+$ and $2^+$ states in the nucleus $^{16}$O. We show that the subtraction procedure leads to: (i) results that are weakly cutoff dependent; (ii) a considerable reduction of the SRPA downwards shift with respect to the random--phase approximation (RPA) spectra (systematically found in all previous applications). This implementation of the SRPA model will allow a reliable analysis of the effects of 2 particle--2 hole configurations ($2p2h$) on the excitation spectra of medium--mass and heavy nuclei.
ISSN: 0556-2813

in2p3-01193119
http://hal.in2p3.fr/in2p3-01193119
DOI : 10.1103/PhysRevC.92.034303
ARXIV : 1506.05975

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
ISSN: 0362-546X

hal-00816761
https://hal.univ-antilles.fr/hal-00816761
DOI : 10.1016/0362-546X(93)90065-Z

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Lead in homes is a well-known source of childhood lead exposure,which is still of concern due to the health effects of low lead doses. This study aims to describe lead contamination in the homes of children aged 6 months to 6 years in France (without overseas). Between October 2008 and August 2009 ,484 housing units were investigated. Lead in tap water and total and leachable lead levels from floor dust, outdoor soils and paint chips were measured. X-ray fluorescence measurements were carried out on non-metallic and metallic substrates. Nationwide results are provided. The indoor floor dust lead (PbD) geometric mean (GM) was 8.8 microg/m2 (0.8 microg/ft2) and 6.8 mmicrog/m2 (0.6 mg/ft2) for total and leachable lead respectively; 0.21% of homes had an indoor PbD loading above 430.5 microg/m2 (40 microg/ft2). The outdoor play area concentration GM was 33.5microg/kg and 21.7microgkg in total and leachable lead respectively; 1.4% of concentrations were higher than or equal to 400microg/kg. Outdoor floor PbD GM was 44.4 mg/m2 (4.1 mg/ft2) that was approximately 3.2 times higher than the GM of indoor PbD. Lead-based paint (LBP) was present in 25% of dwellings, LBP on only non-metallic substrates was present in 19% of homes and on metallic substrates in 10% of dwellings. The GM of lead concentrations in tap water was below 1 microg/L; 58% of concentrations were lower than 1 microg/L and 2.9% were higher than or equal to 10 mg/L. The age cut-off for homes with lead would be 1974 for paint and 1993 for indoor floor dust. This study provides, for the first time, a look at the state of lead contamination to which children are exposed in French housing. Moreover, it provides policy makers an estimate of the number of French dwellings sheltering children where abatement should be conducted.
Environmental Research

hal-00714516
https://hal.archives-ouvertes.fr/hal-00714516

Éditeur(s) : Public Library Science
Résumé : Background: Reconstructing the history of divergence and gene flow between closely-related organisms has long been a difficult task of evolutionary genetics. Recently, new approaches based on the coalescence theory have been developed to test the existence of gene flow during the process of divergence. The deep sea is a motivating place to apply these new approaches. Differentiation by adaptation can be driven by the heterogeneity of the hydrothermal environment while populations should not have been strongly perturbed by climatic oscillations, the main cause of geographic isolation at the surface. Methodology/Principal Finding: Samples of DNA sequences were obtained for seven nuclear loci and a mitochondrial locus in order to conduct a multi-locus analysis of divergence and gene flow between two closely related and hybridizing species of hydrothermal vent mussels, Bathymodiolus azoricus and B. puteoserpentis. The analysis revealed that (i) the two species have started to diverge approximately 0.760 million years ago, (ii) the B. azoricus population size was 2 to 5 time greater than the B. puteoserpentis and the ancestral population and (iii) gene flow between the two species occurred over the complete species range and was mainly asymmetric, at least for the chromosomal regions studied. Conclusions/Significance: A long history of gene flow has been detected between the two Bathymodiolus species. However, it proved very difficult to conclusively distinguish secondary introgression from ongoing parapatric differentiation. As powerful as coalescence approaches could be, we are left by the fact that natural populations often deviates from standard assumptions of the underlying model. A more direct observation of the history of recombination at one of the seven loci studied suggests an initial period of allopatric differentiation during which recombination was blocked between lineages. Even in the deep sea, geographic isolation may well be a crucial promoter of speciation.
Plos One (1932-6203) (Public Library Science), 2009-08 , Vol. 4 , N. 8 , P. 1-15

Droits : 2009 Faure et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
http://archimer.ifremer.fr/doc/00129/24012/21972.pdf
DOI:10.1371/journal.pone.0006485
http://archimer.ifremer.fr/doc/00129/24012/

Éditeur(s) : HAL CCSD Wiley
Résumé : 1. Niche theory proposes that species differences underlie both coexistence within communities and the differentiation in species composition among communities via limiting similarity and environmental filtering. However, it has been difficult to extend niche theory to species-rich communities because of the empirical challenge of quantifying niches for many species. This has motivated the development of functional and phylogeny-based approaches in community ecology, which represent two different means of approximating niche attributes. 2. Here, we assess the utility of plant functional traits and phylogenetic relationships in predicting community assembly processes using the largest trait and phylogenetic data base to date for any set of species-rich communities. 3. We measured 17 functional traits for all 4672 individuals of 668 tree species co-occurring in nine tropical rain forest plots in French Guiana. Trait variation was summarized into two ordination axes that reflect species niche overlap. 4. We also generated a dated molecular phylogenetic tree based on DNA sequencing of two plastid loci (rbcL and matK) comprising 97% of the individuals and 91% of the species in the plots. 5. We found that, on average, co-occurring species had greater functional and, to a lesser extent, phylogenetic similarity than expected by chance. 6. We also found that functional traits and their ordination loadings showed significant, albeit weak, phylogenetic signal, suggesting that phylogenetic distance provides pertinent information on niche overlap in tropical tree communities. 7. Synthesis. We provide the most comprehensive examination to date of the relative importance of environmental filtering and limiting similarity in structuring tropical tree communities. Our results confirm that environmental filtering is the overriding influence on community assembly in these species-rich systems.
ISSN: 0141-6707

hal-01032423
https://hal.archives-ouvertes.fr/hal-01032423
DOI : 10.1111/j.1365-2745.2012.01966.x

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Taking advantage of recent developments in the theory of generalized differentiation, we present an inverse mapping theorem for set-valued maps and prove its stability under small linear perturbations. Using variational convergences of set-valued mappings, we present as well an approximate version of our inverse theorem.
Journal of Mathematical Analysis and applications

hal-01023227
https://hal.archives-ouvertes.fr/hal-01023227
DOI : 10.1016/j.jmaa.2014.07.006

Éditeur(s) : Geological Society of America
Résumé : A seismic-refraction study of the sedimentary structure of the South West African continental shelf was carried out between lat 17°S and 24°S using expendable sonobuoys. Striking differences exist both in the topography and sedimentary structure between the shelf north and south of the Walvis Ridge. South of the ridge, as far as lat 23°S, the shelf consists of a prograded series, whereas north of the ridge, at least as far as lat 17°S, east-trending canyons cut the shelf sedimentary cover. The steep northem scarp of Walvis Ridge can be traced eastward under the sediment of the continental margin. The southern flank of the ridge is buried under a thicker sedimentary cover and could only be traced eastward to long. 10°E on seismic-reflection records. This flank probably parallels the northern scarp under the continental margin. Two-dimensional structural models, built with the help of seismic-retlection and seismic-refraction results and based on the hypothesis of local isostatic equilibrium, account for the obsewed gravity profiles. A compensating root consists of light material (density 2.95 g/cm3) and reaches a depth of about 25 km. Gravity results also suggest that the Walvis Ridge does not constitute a superimposed load on the lithosphere; rather, the ridge and its underlying compensating mass were created at approximately the same time as the adjacent ocean basins. The creation of the two aseismic ridges of the South Atlantic - the Rio Grande Rise and Walvis Ridge - by a mantle hot spot and plume is accepted; this theory seems to explain most of the peculiar features of the Walvis Ridge. However, it is probable that the surface expression of the mantle hot spot was controlled by the presence of weak zones in the lithosphere such as transform faults. [NOT CONTROLLED OCR]
Geological Society of America Bulletin (Geological Society of America), 1975 , Vol. 86 , P. 1713-1724

Droits : Geological Society of America
http://archimer.ifremer.fr/doc/1975/publication-4978.pdf
http://archimer.ifremer.fr/doc/00000/4978/

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Evidence of the impact of exposure to low levels of lead on children's health is increasing. Residential floor dust is the assumed origin of lead exposure by young children. In this study, we estimate the contribution of different lead sources to household interior floor dust contamination. We also estimate the within-home variability of interior floor dust lead loadings. A multilevel model was developed based on data collected in a French survey in 2008-2009 (484 housing units, 1834 rooms). Missing data were handled by multiple imputation using chained equations. The intra-home correlation between interior floor Log dust lead loadings was approximately 0.6. Dust lead from the landing of an apartment, mostly originating outside the building, was the major contributor to interior floor dust lead. Secondary contributors included the lead-based paint on exterior railings, track-in of the exterior soil of the children's play area into the dwelling, smoking inside the home, demolition of nearby old buildings and sites of pollution in the vicinity. Interior lead-based paint contaminated interior floor dust only in old and non-renovated dwellings. To reduce interior floor dust lead levels in the general population of dwellings, common areas should be maintained, and track-in from the outside should be limited as much as possible.
ISSN: 0048-9697

hal-01017419
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01017419
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01017419/document
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01017419/file/Source_Contribution_final.pdf
DOI : 10.1016/j.scitotenv.2013.10.028

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
The quasi-equilibrium approximation is acceptable when molecular interactions are fast enough compared to circuit dynamics, but is no longer allowed when cellular activities are governed by rare events. A typical example is the lactose operon (lac), one of the most famous paradigms of transcription regulation, for which several theories still coexist to describe its behaviors. The lac system is generally analyzed by using equilibrium constants, contradicting single-event hypotheses long suggested by Novick and Weiner (1957). Enzyme induction as an all-or-none phenomenon. Proc. Natl. Acad. Sci. USA 43, 553-566) and recently refined in the study of (Choi et al., 2008. A stochastic single-molecule event triggers phenotype switching of a bacterial cell. Science 322, 442-446). In the present report, a lac repressor (LacI)-mediated DNA immunoprecipitation experiment reveals that the natural LacI-lac DNA complex built in vivo is extremely tight and long-lived compared to the time scale of lac expression dynamics, which could functionally disconnect the abortive expression bursts and forbid using the standard modes of lac bistability. As alternatives, purely kinetic mechanisms are examined for their capacity to restrict induction through: (i) widely scattered derepression related to the arrival time variance of a predominantly backward asymmetric random walk and (ii) an induction threshold arising in a single window of derepression without recourse to nonlinear multimeric binding and Hill functions. Considering the complete disengagement of the lac repressor from the lac promoter as the probabilistic consequence of a transient stepwise mechanism, is sufficient to explain the sigmoidal lac responses as functions of time and of inducer concentration. This sigmoidal shape can be misleadingly interpreted as a phenomenon of equilibrium cooperativity classically used to explain bistability, but which has been reported to be weak in this system.
ISSN: 0022-5193

inserm-00818506
http://www.hal.inserm.fr/inserm-00818506
http://www.hal.inserm.fr/inserm-00818506/document
http://www.hal.inserm.fr/inserm-00818506/file/LacI-TeX.pdf
ARXIV : 1312.5566

Éditeur(s) : HAL CCSD Society for Industrial and Applied Mathematics
Résumé : International audience
In this paper, we developed a theoretical study for nonconservative sytems in one dimension in order to construct numerical schemes for solving the Riemann problem. The nonconservative form of our model system required the use of a well-adapted theory in order to give us a sense of our problem. We chose a framework of generalized functions for solving a scalar hyperbolic equation with a discontinuous coefficient $sigma_t +usigma_x approx 0$, where u is the velocity solution of a Burgers's equation. After an explicit solution of the Riemann problem, we derived Godunov split schemes for computing an approximate solution of the Cauchy problem. We applied our study to a system modeling elasticity and a system modeling gas dynamics. Some stability properties of a scheme and its convergence to a generalized solution are proved for the first model. Numerical experiments confirmed this convergence result. For the second model, calculations of flows containing weak-to-moderate shocks showed that conservation errors are reduced when the mesh is refined but were not entirely eliminated.
ISSN: 0036-1429

hal-00770266
https://hal.univ-antilles.fr/hal-00770266
DOI : 10.1137/S0036142900378637

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
A multifunction Γ is called a Kakutani multifunction if there exist two nonempty convex sets X and Y , each in a Hausdorff topological vector space, such that Γ : X → Y is upper semi-continuous with nonempty compact convex values. We prove the following extension of the Kakutani fixed point theorem : Let Γ : X → X be a multi-function from a simplex X into itself ; if Γ can be factorized by an arbitrary finite number of Kakutani multifunctions, then Γ has a fixed point. The proof relies on a simplicial approximation technique and the Brouwer fixed point theorem. Extensions to infinite-dimensional spaces and applications to game theory are given.
Journal of Mathematical Analysis and applications

hal-00699225
https://hal.archives-ouvertes.fr/hal-00699225

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Demographic processes and spatial dispersal of Triatoma dimidiata, a triatomine species vector of Chagas disease, are modeled by integrodifference equations to estimate invasion capacity of this species under different ecological conditions. The application of the theory of orthogonal polynomials and the steepest descent method applied to these equations, allow a good approximation of the abundance of the adult female population and the invasion speed. We show that: (1) under the same mean conditions of demography and dispersal, periodic spatial dispersal results in an invasion speed 2.5 times larger than the invasion speed when spatial dispersal is continuous; (2) when the invasion speed of periodic spatial dispersal is correlated to adverse demographic conditions, it is 34.7% higher as compared to a periodic dispersal that is correlated to good demographic conditions. From our results we conclude, in terms of triatomine population control, that the invasive success of T. dimidiata may be most sensitive to the probability of transition from juvenile to adult stage. We discuss our main theoretical predictions in the light of observed data in different triatomines species found in the literature.
ISSN: 0022-5193

hal-01298098
https://hal-univ-perp.archives-ouvertes.fr/hal-01298098
DOI : 10.1016/j.jtbi.2016.01.017

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Evidence of the impact of exposure to lowlevels of lead on children's health is increasing. Residential floor dust is the assumed origin of lead exposure by young children. In this study, we estimate the contribution of different lead sources to household interior floor dust contamination. We also estimate the within-home variability of interior floor dust lead loadings. A multilevel model was developed based on data collected in a French survey in 2008-2009 (484 housing units, 1834 rooms). Missing data were handled by multiple imputation using chained equations. The intra-home correlation between interior floor Log dust lead loadings was approximately 0.6. Dust lead from the landing of an apartment, mostly originating outside the building, was the major contributor to interior floor dust lead. Secondary contributors included the lead-based paint on exterior railings, track-in of the exterior soil of the children's play area into the dwelling, smoking inside the home, demolition of nearby old buildings and sites of pollution in the vicinity. Interior lead-based paint contaminated interior floor dust only in old and non-renovated dwellings. To reduce interior floor dust lead levels in the general population of dwellings, common areas should be maintained, and track-in from the outside should be limited as much as possible.
Science of the Total Environment

hal-00997780
https://hal.archives-ouvertes.fr/hal-00997780
DOI : 10.1016/j.scitotenv.2013.10.028