Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Analogue and numerical models have shown that the strength of the lithospheric mantle controls the mode of lithosphere deformation. In extension, the presence or absence of a high strength brittle mantle respectively leads to localized or distributed rifting. However, first order geophysical data question the existence of such a brittle mantle. Here we use 2-D finite-element large strain modelling to quantify the impact of a ductile localizing mantle - instead of brittle - in triggering continental rifting. As a novelty, the mantle rheology considers the effect of grain boundary sliding during strain-induced grain size reduction, which may promote a significant strength drop and subsequent strain localization at low mantle temperature (< 700-800 °C). Our results reveal that such ductile localizing mantle implies varying modes of continental rifting that mainly depend on both the amount of weakening in the ductile mantle and the strength of the lower ductile crust. A medium to strong lower crust implies coupling between the upper crust and ductile localizing mantle, yielding to narrow continental rifting. In contrast, a weak lower crust implies decoupling between the upper crust and ductile localizing mantle, giving rise to a switch from distributed faulting at incipient strain to localized faulting at large strain. Ductile strain localization in the lithospheric mantle is therefore sufficient to trigger continental rifting, although a critical amount of weakening is required. Such ductile localizing mantle provides a relevant geological and mechanical alternative to the brittle mantle. It moreover provides a wider variety of modes of upper crustal faulting that are commonly observed in nature.
ISSN: 0040-1951

Droits : info:eu-repo/semantics/OpenAccess
insu-00924254
https://hal-insu.archives-ouvertes.fr/insu-00924254
https://hal-insu.archives-ouvertes.fr/insu-00924254/document
https://hal-insu.archives-ouvertes.fr/insu-00924254/file/Gueydan_precigout_2014_Tectonophysics.pdf
DOI : 10.1016/j.tecto.2013.11.029

Éditeur(s) : HAL CCSD Springer Verlag (Germany) Springer Verlag
Résumé : Direct numerical simulations of flow through two millimeter-scale rock samples of limestone and sandstone are performed using three diverse fluid dynamic simulators. The resulting steady-state velocity fields are compared in terms of the associated empirical probability density functions (PDFs) and key statistics of the velocity fields. The pore space geometry of each sample is imaged at 5.06−μm voxel size resolution using X-ray microtomography. The samples offer contrasting characteristics in terms of total connected porosity (about 0.31 for the limestone and 0.07 for the sandstone) and are typical of several applications in hydrogeology and petroleum engineering. The three-dimensional fluid velocity fields within the explicit pore spaces are simulated using ANSYS® FLUENT® ANSYS Inc. (2009), EULAG Prusa et al. (Comput. Fluids 37, 1193–1207 2008), and SSTOKES Sarkar et al. (2002). These computational approaches are highly disperse in terms of algorithmic complexity, differ in terms of their governing equations, the adopted numerical methodologies, the enforcement of internal no-slip boundary conditions at the fluid-solid interface, and the computational mesh structure. As metrics of comparison to probe in a statistical sense the internal similarities/differences across sample populations of velocities obtained through the computational systems, we consider (i) integral quantities, such as the Darcy flux and (ii) main statistical moments of local velocity distributions including local correlations between velocity fields. Comparison of simulation results indicates that mutually consistent estimates of the state of flow are obtained in the analyzed samples of natural pore spaces despite the considerable differences associated with the three computational approaches. We note that in the higher porosity limestone sample, the structures of the velocity fields obtained using ANSYS FLUENT and EULAG are more alike than either compared against the results obtained using SSTOKES. In the low-porosity sample, the structures of the velocity fields obtained by EULAG and SSTOKES are more similar than either is to the fields obtained using ANSYS FLUENT. With respect to macroscopic quantities, ANSYS FLUENT and SSTOKES provide similar results in terms of the average vertical velocity for both of the complex microscale geometries considered, while EULAG tends to render the largest velocity values. The influence of the pore space structure on fluid velocity field characteristics is also discussed.
ISSN: 1420-0597

hal-01174152
https://hal.archives-ouvertes.fr/hal-01174152
DOI : 10.1007/s10596-015-9486-7

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Holocene Lake Mega-Chad (LMC) was the largest late Quaternary water-body in Africa. The development of this giant paleo-lake is related to a northward shift of the isohyetes interpreted as evidence for an enhanced Monsoon (African Humid Period). Numerous preserved coastal features have been described all around the LMC shore. Such features reveal the main paleo-hydrodynamical tendencies. In the context of a closed water-body like LMC, hydrodynamics are forced mainly by winds. We use a three-dimensional numerical model (SYMPHONIE) to simulate the mean hydrodynamics in LMC under both Harmattan-like (northeasterly trade winds) and Monsoon-like (southwesterly winds) forcings. The northern part of LMC displays coastal features, such as sand spits, that are consistent with the simulations forced by Harmattan-like winds. Geomorphic features related to Monsoon-driven hydrodynamics are not clearly expressed. They could have developed during the early stage of LMC but subsequently reworked. At the time of sand-spit building, Harmattan-like driven hydrodynamics prevailed and related coastal features were preferentially preserved in the sedimentary record.
ISSN: 0033-5894

hal-00475633
https://hal.archives-ouvertes.fr/hal-00475633
DOI : 10.1016/j.yqres.2009.10.010

Éditeur(s) : HAL CCSD
Résumé : Today, one of the main challenges in the oil industry is the exploitation of new resources in naturally fractured reservoirs often located in structurally complex areas such as plate boundaries, mountain ranges or near salt structures. While numerical models of rock deformation based on continuum mechanics are becoming industry standard in providing efficient means for modelling natural fractures in reservoirs, the knowledge of past perturbed stress fields, which is referred as the type (normal, wrench or reverse), orientation and magnitude of the regional or local tectonic stresses that needs to be applied as boundary condition in numerical simulations, is often unknown or approximated.The essence of this thesis is to improve the recovery of the paleostress field needed to constrain numerical simulations. I first described and discuss through a comprehensive mechanically-based multi-parametric study how far we can rely on the commonly used paleostress inversion methods based on fault slip data and the Wallace and Bott assumptions. I then compared this method with a new generation technique based on geomechanics using field observations. Since slip markers on faults are hardly observed in core or image log, I used observed natural fracture data as main drivers for the inversion of the paleostress using geomechanically-based method. I demonstrated, through various outcrop and subsurface examples, how this can efficiently be done. Finally, I aimed at addressing the problem of polyphase fracture data sets with unknown mechanical type (joints, faults, stylolites ...) and expanded the mechanical stress inversion to the separation of tectonic phases.
Aujourd'hui, l'un des principaux défis dans l'industrie pétrolière est l'exploitation de nouvelles ressources dans les réservoirs naturellement fracturés souvent situés dans des zones structurellement complexes tels que les frontières de plaques, les chaînes de montagnes ou les structures de proches des dômes de sel. Alors que les modèles numériques de déformation des roches basée sur la mécanique des milieux continus fournissant des moyens efficaces pour la modélisation de fractures naturelles dans les réservoirs, sont devenus la norme dans l'industrie, les paléo-contraintes régionales ou locales appliquées comme condition aux limites dans les simulations numériques, définies par le régime (normal, décrochant ou inverse), l'orientation, et la magnitude des contraintes tectoniques, sont souvent inconnues ou approximées.L'essence de cette thèse est d'améliorer la prédiction du champ de paléo-contrainte nécessaire pour contraindre les simulations numériques. J’ai décrit dans un premier temps à travers une étude comparative multi-paramétrique complète basée sur la mécanique, dans quelle mesure nous pouvions compter sur les méthodes d'inversion des paléo-contraintes basées sur les hypothèses de Wallace et Bott et les données de glissement sur les failles. J’ai ensuite comparé ces méthodes avec une technique d’inversion de nouvelle génération basée sur la géomécanique en utilisant les observations de terrain. Puisque les marqueurs de glissement sur les failles sont rarement observés le long du forage, j’ai utilisé l’inversion géomécanique des contraintes pour les données de fractures naturelles observées. J’ai alors démontré, l’efficacité de cette technique à travers divers exemples d'affleurements et de subsurface. Enfin, j’ai proposé une solution afin de résoudre le problème des données de fractures polyphasées à type cinématique inconnu (joints, failles, stylolites ...) et étendu l’inversion de contrainte basée sur la géomécanique à la séparation des phases tectoniques.
https://hal.archives-ouvertes.fr/tel-01324110

tel-01324110
https://hal.archives-ouvertes.fr/tel-01324110
https://hal.archives-ouvertes.fr/tel-01324110/document
https://hal.archives-ouvertes.fr/tel-01324110/file/theselejri.pdf

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
The Gulf of Cadiz spans the plate boundary between Africa and Eurasia west of the Betic–Rif mountain belt. A narrow east dipping subduction zone descends beneath the Gulf of Cadiz and the straits of Gibraltar. The deep crustal structure of the Gulf and the adjacent SW Iberian and Moroccan margins is constrained by numerous multi-channel seismic reflection and wide-angle seismic surveys. A compilation of these existing studies is presented in the form of depth to basement, sediment thickness, depth to Moho and crustal thickness maps. These structural maps image an E–W trending trough, with thin (< 10 km) crust beneath the Gulf of Cadiz. This trough is filled by an eastward thickening wedge of sediments, reaching a thickness of 10–15 km in the eastern Gulf. These sediments are tectonically deformed, primarily along a series of westward-vergent thrust faults and represent a 200–250 km wide accretionary wedge. The northern and especially the southern limits of the accretionary wedge are marked by sharp morphological lineaments showing evidence of recent deformation. These tectonic limits are situated in an internal position with respect to the Miocene deformation front (external Betic and Rif allocthons), which has been abandoned. At the western boundary of the accretionary wedge, near the adjacent Seine and Horseshoe abyssal plains, an E–W trending basement high (Coral Patch Ridge) can be seen indenting the deformation front in an asymmetric manner. Analog modeling is performed using granular materials accreted against a semicircular backstop (representing the basement of the Rif and Betic mountain belts). The modeling initially produces a symmetric, arcuate accretionary wedge. The ensuing collision of an oblique rigid indenter retards accretion on one side, resulting in an embayment and a locally steeper deformation front. The deformation pattern observed in morphology and high-resolution seismic profiles suggests the accretionary wedge and underlying subduction system is still active. The implications of active subduction for the source region of the 1755 Lisbon earthquake and the regional seismic hazard assessment are discussed.
ISSN: 0040-1951

hal-00424922
http://hal.univ-brest.fr/hal-00424922
http://hal.univ-brest.fr/hal-00424922/document
http://hal.univ-brest.fr/hal-00424922/file/Gutscher_09Tphys_rev.pdf
DOI : 10.1016/j.tecto.2008.11.031

Résumé : La thèse est consacrée à la recherche des catastrophes marines (tsunamis, ondes de tempête) dans les Antilles françaises, en utilisant des modèles analytiques et numériques de mécanique des fluides. L'accent est mis sur le développement de modèles de mouvement de glissements de terrain et des vagues causées par ces glissements. Le modèle le plus simple du glissement de terrain «solide block» est utilisé pour évaluer les caractéristiques des flux pyroclastiques du volcan Soufrière-Hills (Montserrat). Un modèle plus complexe de modélisation de glissement de terrain (modèle de Savage-Hutter) a été étudié analytiquement, donnant ainsi une nouvelle famille de solutions exactes décrivant le mouvement de l'écoulement par gravité non linéaire dans une vallée ou dans un canyon sous-marin. Le modèle comprend des ondes simples (Riemann waves),le cas d'un barrage qui cède (dam-break problem), des solutions auto-similaires dans la M-fonne et « chapeaux paraboliques ». Grâce à la théorie linéaire de l'eau peu profonde nous avons étudié le processus de génération de tsunamis par des glissements de terrain de volume variable, se déplaçant à une vitesse variable dans un bassin de profondeur variable. Dans le cas d'un fond marin particulier (cas sans "réflexion"), les phénomènes de résonnance ont été étudiés dans un bassin à profondeur variable. Nous avons utilisé des méthodes numériques pour la résolution non-linéaire des équations des eaux peu profondes afin d'analyser des catastrophes marines réelles (les ondes de tempête causées par le cyclone Lili en 2002, le tsunami volcanique de 2003 à Montserrat) et probables (un tsunami prés des côtes de la Martinique). Des données sur les catastrophes
The dissertation is devoted to research in the field of marine natural hazards (tsunamis, storm surges) in the French West Indies, using analytical and numerical models of fluid mechanics. Emphasis is placed on the development of models of landslide motion and generated tsunami waves. The simple "solid block" model is used to evaluate the characteristics of pyroclastic flow Soufriere Hills volcano (Montserrat). The "fluid model" of a landslide (so called Savage-Hutter model) is studied analytically; within this model a new family of exact solutions that describe the motion of nonlinear gravity flow in a valley or underwater canyon is found: nonlinear Riemann wave, dan break problem, self-similar solutions (M - wave and parabolic cap). In the framework of the linear shallow water theory the process of generation of tsunami waves by landslides of variable volume moving with variable velocity above the basin of variable depth is studied. For the specific bottom profile ("reflectionless" one) the resonant phenomena is investigated in the basin of variable depth. Numerical methods are used to analyze marine hazards: historical (storm surges, caused by Cyclone LILI in 2002; volcanic tsunami 2003 on Montserrat) and possible events (possible tsunami of the coast of Martinique). Various data on marine natural disasters are obtained during field surveys (volcanic tsunami in 2003, stonn surges caused by Hurricane Dean in 2007). Designed catalogs of tsunamis and storm surges are created based on results of numerical modeling and field studies; some statistical analysis is perfomed

http://www.theses.fr/2011AGUY0435/document

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : International audience
Many iterative processes can be interpreted as discrete dynamical systems and, in certain cases, they correspond to a time discretisation of differential systems. In this article the authors propose generating numerical methods in numerical linear algebra by modelling the linear system to be solved as a given state of a dynamical system; the solution can be reached asymptotically, as a (asymptotically stable) steady state, but also as a finite time (shooting methods). In that way, any (stable) numerical scheme for the integration of such a problem can be presented as a method for solving linear systems. The authors discuss aspects of this approach, which allows them to recover some known methods but also to introduce new ones. Finally, some convergence results and numerical illustrations are presented.
ISSN: 1017-1398

hal-00730194
https://hal.archives-ouvertes.fr/hal-00730194

Éditeur(s) : HAL CCSD
Résumé : This work provides new constraints on the development and on the distribution of the deformation in the upper mantle and particularly beneath transform plate boundaries. USArray experiment and the remarkable increase of the dataset in California for the past ten years allowed us to scrutinize the lateral variations of the anisotropy in the vicinity of the San Andreas Fault zone. We have confirmed and increased the detection of two layers of anisotropy beneath this plate boundary. The first layer, located in the lithosphere, is related to the deformation induced at the fault, and the other one, located in the asthenosphere, is coherent with the anisotropy observed far from it, its origin is however less clear. We show that the deformation zone associated both to the San Andreas, Calaveras and Hayward Faults, is likely 40 km wide at 70 km depth. We then performed numerical thermomechanical modeling (ADELI) of the displacement of a transform plate boundary associated with the computation of the development of crystallographic fabrics using a viscoplastic selfconsistent approach (VPSC). We analyzed the distribution of the deformation in the model ant looked after the possible interactions at depth between deformation caused at surface by the strike-slip dynamic of the fault and the shearing at the base of the lithosphere caused by the horizontal displacement of the plates. Elastic properties derived from the crystallographic fabrics modeled, show that such interactions exist and induce, beneath the fault zone, a progressive rotation of the crystallographic fabrics with depth. Seismological signature of these smooth rotations is however not relevant with the presence of two anisotropic layers as proposed beneath California. We thus consider that a decoupling zone exists between the lithosphere and the asthenosphere beneath the California to account for the sharp separation between a lithospheric and an asthenospheric deformation. We furthermore estimate that anisotropy observed far form the San Andreas Fault in California cannot be explained only by the drag of the asthenosphere by the North America lithosphere as proposed in our article. Indeed, we can only expect few tenths of second of splitting delay from the anisotropic properties derived from the numerical modeling of a plate moving in the same direction and in the same velocity than the North American lithosphere only for 10 Ma of displacement. As delays observed in California rather reach 1.5 s, anisotropy in this region thus requires the existence of an active asthenospheric flow to be explained.
Le travail réalisé pendant cette thèse a permis d'apporter de nouvelles contraintes sur le développement et la distribution de la déformation dans le manteau supérieur et plus particulièrement au niveau des grandes limites de plaques décrochantes. Grâce à l'apport de l'expérience USArray et d'une dizaine d'années d'enregistrements sismologiques supplémentaires, nous avons pu étudier, de manière précise, les variations d'anisotropie dans le voisinage de la Faille de San Andreas. Nous avons confirmé et étendu l'observation de deux couches anisotropes sous cette limite de plaque. On y observe une première couche localisée dans la lithosphère marquant la déformation induite à la limite de plaque, et une autre, asthénosphérique, cohérente avec l'anisotropie observée loin de la faille et d'origine plus discutée. Nous avons montré que la zone de déformation associée aux failles de San Andreas, Calaveras et d'Hayward a, vraisemblablement, une largeur d'au moins 40 kilomètres en base de lithosphère, sous chacune de ces failles. Nous avons ensuite procédé à la modélisation thermomécanique (ADELI) de la migration d'une limite de plaques décrochante couplée à une modélisation du développement de fabriques cristallographiques par une approche viscoplastique auto-cohérente (VPSC). Ceci nous a permis d'y observer le développement de la déformation et les conséquences des possibles interactions entre la déformation décrochante en surface et le cisaillement en base de lithosphère dû au déplacement horizontal des plaques. Les propriétés élastiques déduites des fabriques cristallographiques modélisées montrent que de telles interactions existent et provoquent, sous la limite de plaques, une rotation des orientations cristallographiques avec la profondeur. Le signal associé à ces rotations progressives n'est toutefois pas cohérent avec la présence de deux couches d'anisotropie comme proposée sous la faille de San Andreas. Nous pensons par conséquent qu'il existe, sous la Californie, une zone de découplage entre la lithosphère et l'asthénosphère, permettant d'individualiser une déformation lithosphérique d'une déformation asthénosphérique. Nous estimons, en outre, que l'anisotropie observée dans l'asthénosphère sous la Californie ne peut être expliquée seulement par le cisaillement induit par le déplacement de la lithosphère Nord Amérique. En effet, les propriétés anisotropes obtenues par modélisation à partir d'une plaque se déplaçant dans une direction et une vitesse proche de celle de la plaque Amérique du Nord montrent qu'on ne peut espérer guère plus que quelques dixièmes de seconde de délai au bout de 10 Ma de déplacement. Les déphasages mesurés en Californie étant de l'ordre de 1,5 s, il est donc nécessaire d'invoquer la présence d'écoulements mantelliques actifs sous cette région.
https://tel.archives-ouvertes.fr/tel-00767124

tel-00767124
https://tel.archives-ouvertes.fr/tel-00767124
https://tel.archives-ouvertes.fr/tel-00767124/document
https://tel.archives-ouvertes.fr/tel-00767124/file/theseBonnin.pdf

Éditeur(s) : HAL CCSD AGU and the Geochemical Society
Résumé : International audience
Numerical models show that small-scale convection (SSC) occurring atop a mantle plume is a plausible mechanism to rejuvenate the lithosphere. The triggering of SSC depends on the density contrast and on the rheology of the unstable layer underlying the stagnant upper part of the thermal boundary layer (TBL). Partial melting may change both properties. We analyze, using 2-D numerical simulations, how partial melting influences the dynamics of time-dependent SSC instabilities and the resulting thermo-mechanical rejuvenation of an oceanic plate moving atop of a plume. Our simulations show a complex behavior, with acceleration, no change, or delay of the SSC onset, due to competing effects of the latent heat of partial melting, which cools the plume material, and of the buoyancy increase associated with both melt retention and depletion of residue following melt extraction. The melt-induced viscosity reduction is too localized to affect significantly SSC dynamics. Faster SSC triggering is promoted for low melting degrees (low plume temperature anomalies, thick lithosphere, or fast moving plates), which limit both the temperature reduction due to latent heat of melting and the accumulation of depleted buoyant residue in the upper part of the unstable layer. In contrast, high partial melting degrees lead to a strong temperate decrease due to latent heat of melting and development of a thick depleted layer within the sublithospheric convecting layer, which delay the development of gravitational instabilities. Despite differences in SSC dynamics, the thinning of the lithosphere is not significantly enhanced relatively to simulations that neglect partial melting.
ISSN: 1525-2027

hal-01277175
https://hal.archives-ouvertes.fr/hal-01277175
DOI : 10.1002/2015GC005967

Éditeur(s) : HAL CCSD AGU and the Geochemical Society
Résumé : International audience
The association of experimental data showing that the plastic deformation of olivine, the main constituent of the upper mantle, is highly anisotropic and the ubiquitous seismic anisotropy in the upper mantle, which indicates that olivine crystals show coherent orientations over scales of tens to hundreds of kilometers, implies that the long-term deformation in the upper mantle is anisotropic. We propose a multiscale approach, based on a combination of finite element and homogenization techniques, to model the deformation of a lithospheric plate while fully considering the mechanical anisotropy stemming from a strain-induced orientation of olivine crystals in the mantle. This multiscale model explicitly takes into account the evolution of crystal preferred orientations (CPO) of olivine and of the mechanical anisotropy during the deformation. We performed a series of numerical experiments simulating the uniaxial extension of a homogeneous (100% olivine) but anisotropic plate to test the role of the olivine CPO on the plate mechanical behavior and the link between CPO and mechanical anisotropy evolution. Even for this simple solicitation, different orientations and intensity of the initial olivine CPO result in variable plate strengths and deformation regimes. A plate with an initial CPO where the olivine [100] and [010] axes are concentrated at 45 degrees to the extension direction has high resolved shear stresses on the easy (010)[100] and (001)[100] slip systems of olivine. This results in low strength and in deformation by transtension. Plates with an initial CPO where the maximum of [100] axes is parallel or normal to the extension direction show a high initial strength. Isotropic plates have an intermediate behavior. The progressive rotation of olivine [100] axes toward the imposed stretching direction results in hardening in all models, except in those characterized by an initial concentration of olivine [100] axes normal to the imposed extension, in which softening is followed by hardening.
ISSN: 1525-2027

hal-00420063
https://hal.archives-ouvertes.fr/hal-00420063
DOI : 10.1029/2009GC002423

Éditeur(s) : HAL CCSD AGU and the Geochemical Society
Résumé : International audience
We propose a new thermomechanical numerical model of mid-ocean ridge accretion aimed at investigating asymmetric spreading rates, diverse configurations of lens and sill magma injections, crystallization and depth, and on- and off-axis patterns of hydrothermal cooling. The numerical algorithm iteratively resolves temperature and motion equations until it reaches a stationary solution. The motion equation was written in a vorticity-stream function formalism, with boundary and internal conditions applied to the stream function to impose the style of magma injection. Unlike in previous models, our model does not assume an a priori shape for the temperature field, which is initiated by an initial half-space cooling according to the left and right spreading rates. Complex patterns of hydrothermal cooling are simulated by enhanced thermal diffusivity. The model succeeds in describing the dynamic and thermal effects of spreading rates, the style of magma intrusion, and the hydrothermal cooling. Accurate descriptions of these are essential to study the cooling histories of crustal rocks and geophysical observables.
ISSN: 1525-2027

hal-00413118
https://hal.archives-ouvertes.fr/hal-00413118
DOI : 10.1029/2008GC002270

Éditeur(s) : IEEE
Résumé : This paper aims at studying the quality of the sea surface salinity (SSS) retrieved from soil moisture and ocean salinity (SMOS) data in coastal areas. These areas are characterized by strong and variable SSS gradients [several practical salinity units (psu) on relatively small scales: the extent of river plumes is highly variable, typically at kilometric and daily scales. Monitoring this variability from SMOS measurements is particularly challenging because of their resolution (typically 30-100 km) and because of the contamination by the nearby land. A set of academic tests was conducted with a linear coastline and constant geophysical parameters, and more realistic tests were conducted over the Bay of Biscay. The bias of the retrieved SSS has been analyzed, as well as the root mean square (rms) of the bias, and the retrieved SSS compared to a numerical hydrodynamic model in the semirealistic case. The academic study showed that the Blackman apodization window provides the best compromise in terms of magnitude and fluctuations of the bias of the retrieved SSS. Whatever the type of vegetation cover, a strong negative bias, greater than 1 psu, was found when nearer than 36 km from the coast. Between 44 and 80 km, the type of vegetation cover has an impact of less than a factor 2 on the bias, and no influence further than 80 km from the coast. The semirealistic study conducted in the Bay of Biscay showed a bias over ten days lower than 0.2 psu for distances greater than 47 km, due to an averaging over various geometries (coastline orientation, swath orientation, etc.). The bias showed a weak dependence on the location of the grid point within the swath. Despite the noise on the retrieved SSS, contrasts due to the plume of the Loire River and the Gironde estuary remained detectable on ten-day averaged maps with an rms of 0.57 psu. Finally, imposing thresholds on the major axis of the measurements brought little improvement to the bias, whereas it increased the rms and- could lead to strong swath restriction: a 49-km threshold on the major axis resulted in an effective swath of 800-900 km instead of 1200 km. NOT CONTROLLED OCR
Transactions on geoscience an remote sensing IEEE (0196-2892) (IEEE), 2007-07 , Vol. 45 , N. 7 , P. 2061-2072

Droits : 2007 IEEE
http://archimer.ifremer.fr/doc/2007/publication-3643.pdf
DOI:10.1109/TGRS.2007.894934
http://archimer.ifremer.fr/doc/00000/3643/

Éditeur(s) : HAL CCSD
Résumé : International audience
The Duffy Antigen/Receptor for Chemokine (DARC) is a seven segment transmembrane protein. It was firstly discovered as a blood group antigen and was the first specific gene locus assigned to a specific autosome in man. It became more famous as an erythrocyte receptor for malaria parasites (Plasmodium vivax and Plasmodium knowlesi), and finally for chemokines. DARC is an unorthodox chemokine receptor as (i) it binds chemokines of both CC and CXC classes and (ii) it lacks the Asp-Arg-Tyr consensus motif in its second cytoplasmic loop hence cannot couple to G proteins and activate their signaling pathways. DARC had also been associated to cancer progression, numerous inflammatory diseases, and possibly to AIDS. In this review, we will summarize important biological data on DARC. Then we shall focus on recent development of the elaboration and analyzes of structural models of DARC. We underline the difficulty to propose pertinent structural models of transmembrane protein using comparative modeling process, and other dedicated approaches as the Protein Blocks. The chosen structural models encompass most of the biochemical data known to date. Finally, we present recent development of protein - protein docking between DARC structural models and CXCL-8 structures. We propose a hierarchal search based on separated rigid and flexible docking.
Infectious disorders drug targets

Droits : info:eu-repo/semantics/OpenAccess
inserm-00366309
http://www.hal.inserm.fr/inserm-00366309
http://www.hal.inserm.fr/inserm-00366309/document
http://www.hal.inserm.fr/inserm-00366309/file/de_Brevern_Autin_Bertrand_Colin_Etchebest.pdf
http://www.hal.inserm.fr/inserm-00366309/file/inserm-00366309_edited.pdf

Éditeur(s) : Pergamon-elsevier Science Ltd
Résumé : The south-west lagoon of New Caledonia is a wide semi-open coral reef lagoon bounded by an intertidal barrier reef and bisected by numerous deep inlets. This paper synthesizes findings from the 2000-2008 French National Program EC2CO-PNEC relative to the circulation and the transport of suspended particles in this lagoon. Numerical model development (hydrodynamic, fine suspended sediment transport, wind-wave, small-scale atmospheric circulation) allowed the determination of circulation patterns in the lagoon and the charting of residence time, the later of which has been recently used in a series of ecological studies. Topical studies based on field measurements permitted the parameterisation of wave set-up induced by the swell breaking on the reef barrier and the validation of a wind-wave model in a fetch-limited environment. The analysis of spatial and temporal variability of suspended matter concentration over short and long time-scales, the measurement of grain size distribution and the density of suspended matter (1.27 kg 1(-1)), and the estimation of erodibility of heterogeneous (sand/mud, terrigenous/biogenic) soft bottoms was also conducted. Aggregates were shown to be more abundant near or around reefs and a possible biological influence on this aggregation is discussed. Optical measurements enabled the quantification of suspended matter either in situ (monochromatic measurements) or remotely (surface spectral measurements and satellite observations) and provided indirect calibration and validation of a suspended sediment transport model. The processes that warrant further investigation in order to improve our knowledge of circulation and suspended sediment transport in the New Caledonia lagoon as well as in other coral reef areas are discussed, as are the relevance and reliability of the numerical models for this endeavour.
Marine Pollution Bulletin (0025-326X) (Pergamon-elsevier Science Ltd), 2010 , Vol. 61 , N. 7-12 , P. 269-296

Droits : 2010 Elsevier Ltd All rights reserved.
http://archimer.ifremer.fr/doc/00014/12526/9401.pdf
DOI:10.1016/j.marpolbul.2010.06.023
http://archimer.ifremer.fr/doc/00014/12526/

Éditeur(s) : Springer
Résumé : Series of sensitivity tests were performed with a z-coordinate, global eddy-permitting (1/4 degrees) ocean/sea-ice model (the ORCA-R025 model configuration developed for the DRAKKAR project) to carefully evaluate the impact of recent state-of-the-art numerical schemes on model solutions. The combination of an energy-enstrophy conserving (EEN) scheme for momentum advection with a partial step (PS) representation of the bottom topography yields significant improvements in the mean circulation. Well known biases in the representation of western boundary currents, such as in the Atlantic the detachment of the Gulf Stream, the path of the North Atlantic Current, the location of the Confluence, and the strength of the Zapiola Eddy in the south Atlantic, are partly corrected. Similar improvements are found in the Pacific, Indian, and Southern Oceans, and characteristics of the mean flow are generally much closer to observations. Comparisons with other state-of-the-art models show that the ORCA-R025 configuration generally performs better at similar resolution. In addition, the model solution is often comparable to solutions obtained at 1/6 or 1/10 degrees resolution in some aspects concerning mean flow patterns and distribution of eddy kinetic energy. Although the reasons for these improvements are not analyzed in detail in this paper, evidence is shown that the combination of EEN with PS reduces numerical noise near the bottom, which is likely to affect current-topography interactions in a systematic way. We conclude that significant corrections of the mean biases presently seen in general circulation model solutions at eddy-permitting resolution can still be expected from the development of numerical methods, which represent an alternative to increasing resolution.
Ocean Dynamics (1616-7341) (Springer), 2006-12 , Vol. 56 , N. 5-6 , P. 543-567

Droits : © Springer 2006. Part of Springer Science+Business Media
http://archimer.ifremer.fr/doc/2006/publication-3514.pdf
DOI:10.1007/s10236-006-0082-1
http://archimer.ifremer.fr/doc/00000/3514/

Éditeur(s) : HAL CCSD European Geosciences Union
Résumé : We designed a thermo-mechanical numerical model for fast-spreading mid-ocean ridge with variable viscosity, hydrothermal cooling, latent heat release, sheeted dyke layer, and variable melt intrusion possibilities. The model allows for modulating several accretion possibilities such as the "gabbro glacier" (G), the "sheeted sills" (S) or the "mixed shallow and MTZ lenses" (M). These three crustal accretion modes have been explored assuming viscosity contrasts of 2 to 3 orders of magnitude between strong and weak phases and various hydrothermal cooling conditions depending on the cracking temperatures value. Mass conservation (stream-function), momentum (vorticity) and temperature equations are solved in 2-D cartesian geometry using 2-D, alternate direction, implicit and semi-implicit finite-difference scheme. In a first step, an Eulerian approach is used solving iteratively the motion and temperature equations until reaching steady states. With this procedure, the temperature patterns and motions that are obtained for the various crustal intrusion modes and hydrothermal cooling hypotheses display significant differences near the mid-ocean ridge axis. In a second step, a Lagrangian approach is used, recording the thermal histories and cooling rates of tracers travelling from the ridge axis to their final emplacements in the crust far from the mid-ocean ridge axis. The results show that the tracer's thermal histories are depending on the temperature patterns and the crustal accretion modes near the mid-ocean ridge axis. The instantaneous cooling rates obtained from these thermal histories betray these discrepancies and might therefore be used to characterize the crustal accretion mode at the ridge axis. These deciphering effects are even more pronounced if we consider the average cooling rates occurring over a prescribed temperature range. Two situations were tested at 1275-1125 °C and 1050-850 °C. The first temperature range covers mainly the crystallization range that is characteristic of the high temperature areas in the model (i.e. the near-mid-oceanic-ridge axis). The second temperature range corresponds to areas in the model where the motion is mainly laminar and the vertical temperature profiles are closer to conductive. Thus, this situation results in less discriminating efficiency among the crustal accretion modes since the thermal and dynamic properties that are described are common to all the crustal accretion modes far from the ridge axis. The results show that numerical modeling of thermo-mechanical properties of the lower crusts may bring useful information to characterize the ridge accretion structure, hydrothermal cooling and thermal state at the fast-spreading ridges and may open discussions with petrological cooling rate results.
ISSN: 1991-959X

hal-00907012
https://hal.archives-ouvertes.fr/hal-00907012
DOI : 10.5194/gmd-6-1659-2013

Éditeur(s) : HAL CCSD Elsevier Masson
Résumé : Normal faulting mechanisms observed in the northern foothills of the Central–Western Pyrenees are remarkable, since one expects thrust faults at a convergent plate boundary. To understand the mechanisms involved, we used numerical modeling and investigated the impact of the following processes: gravitational potential energy associated with topography and dense crustal blocks; isostatic compensation in response to denudation and/or sedimentation. To decipher the effects of each process, we designed three model geometries and added a pre-existing weak fault where most of the seismicity occurs. To evaluate our model results, we derived the fault slip rate from the focal mechanisms in the region where we have the fault in our model. We found a slip rate of ∼15 m/Ma, which is in agreement with our modelling results. We conclude that flexural rebound induced by surface processes is able to explain the seismicity in Central–Western Pyrenees.
ISSN: 1631-0713

hal-01346028
https://hal.archives-ouvertes.fr/hal-01346028
https://hal.archives-ouvertes.fr/hal-01346028/document
https://hal.archives-ouvertes.fr/hal-01346028/file/Genti.pdf
DOI : 10.1016/j.crte.2015.08.004

Éditeur(s) : HAL CCSD
Résumé : Among erosion processes, river incision is classicaly described as a key process controlling erosion of landscapes. Incision efficiency is mainly influenced by climate and erodibility. This latter is not only dependent on the nature of the bedrock, but also on its past deformation, which affects its rheological effective properties, such as fracture density. The main objectives of this thesis are: (1) to better constrain the relationship between effective properties and erodibility, and (2) to quantify the influence of erodibility and erosion on both the temporal and spatial building or decay of the topography. Several numerical tools are developed. A 1D formalism of landscape evolution is introduced, including river incision with stochastic distribution of water discharge and hillslope landsliding. A new remeshing algorithm called Surface Lagrangian Remeshing (SLR) is developed as a complement to remeshing algorithms dealing with internal elements. It allows one to take into account long-term erosion into 2D Lagrangian numerical codes based on triangular finite elements. Then the potentiality of measuring erodibility in-situ using a Schmidt hammer (R) is assessed for the active orogen of Taiwan, the diagenetic Annot sandstones and St Clement fault zone. Results suggest a strong control of R by effective properties. A linear model based on effective medium theory is applied to a fault zone with an unmacthed resolution (750 measures, 25 measures per square meter). The model successfully correlates R to fracture density. These results demonstrate that effective elasticity as well as erodibility are sensitive to the density and type of fractures. Finally I focus on the erosional and rheological conditions that allows reproducing post-orogenic evolution of mountain belts. A model coupling surface erosion and regional isostatic uplift is consistent with observations. The topographic decay and decrease of the ratio of surface elevation over crustal root thickness is at first order controlled by the initial geometry of the mountain belt and erosion efficiency. This new model highlights the control ofclimate and erodibility on the topographic decay and of lithospheric rheology on the perseverance of crustal roots.
Parmi les processus d'érosion, l'incision des rivières est classiquement décrit comme un processus clé contrôlant l'érosion des paysages. L'efficacité de l'incision est principalement influencée par le climat et par l'érodabilité. Ce dernier paramètre ne dépend pas seulement de la nature du substratum rocheux, mais aussi de sa déformation passée qui affecte ses propriétés rhéologiques équivalentes. Les principaux objectifs de cette thèse sont: (1) de mieux contraindre les relations entre propriétés équivalentes et érodabilité, et (2) de quantifier l'influence de l'érosion et de l'érodabilité sur la formation ou la décadence, spatiale et temporelle, de la topographie. Plusieurs outils numériques sont développés. Un formalisme 1D d'évolution des paysages est proposé, prenant en compte simultanément l'incision des rivières avec une distribution stochastique des débits en eau et l'érosion des versants par glissements de terrain. Un nouvel algorithme de remaillage appelé Surface Lagrangian Remeshing (SLR) est développé. Il permet de prendre en compte l'érosion à long terme dans les codes numériques 2D Lagrangiens basés sur des éléments finis triangulaires. Ensuite, la possibilité de mesurer in-situ l'érodabilité avec un marteau de Schmidt (R) est évaluée pour: l'orogène actif de Taiwan, les grès diagénétiques d'Annot et la zone de faille de St Clément. Les résultats suggèrent un fort contrôle de R par les propriétés équivalentes des roches testées. Un modèle linéaire, basé sur la théorie des milieux équivalents, est appliqué à une zone de faille avec une résolution inégalée (750 mesures, 25 mesures par mètre carré). Le modèle permet de corréler avec succès la densité de fracture et R. Ces résultats démontrent empiriquement que l'élasticité équivalente ainsi que l'érodabilité sont sensibles à la densité et à la nature des fractures. Enfin j'étudie les conditions d'érosion et de rhéologie qui permettent de reproduire l'évolution des chaînes de montagnes post-orogéniques. Un modèle couplant érosion en surface et soulèvement isostatique régional est compatible avec les observations. Les taux de décroissance topographique et de diminution du rapport de l'élévation de surface sur l'épaisseur de racine crustale sont contrôlés au premier ordre par la géométrie initiale de la chaîne de montagne et par l'efficacité de l'érosion. Ce nouveau modèle met en évidence le contrôle du climat et de l'érodabilité sur la décroissance topographique et de la rhéologie lithosphérique sur la persévérance des racines crustales.
https://tel.archives-ouvertes.fr/tel-00602341

tel-00602341
https://tel.archives-ouvertes.fr/tel-00602341
https://tel.archives-ouvertes.fr/tel-00602341/document
https://tel.archives-ouvertes.fr/tel-00602341/file/thesephilippesteer.pdf

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
In southeastern Taiwan a slice of forearc basement belonging to the Philippine Sea Plate upper-plate is suspected to subduct under the Luzon arc as a consequence of the transition from oceanic to incipient continental subduction. Effects on the morphology, deformation, geometry of structures and tectonic evolution of the orogenic wedge in the collision area are numerous. This study examines the impact of foreare lithosphere subduction on forearc basin and accretionary wedge deformation. A morpho-structural analysis of the geological features observed onland and offshore allows describing in detail the complex deformation suffered by the area. A combined approach by analogue modeling is applied to better understand the phenomenon. Comparison between nature and experimental results shows that subduction of a forearc basement slice induces intense shortening and concomitant deformation in the foreare domain. Such process involves deformation of the foreare basin previously developed in a setting of oceanic subduction. Sediments of the forearc basin are involved in the growth of a new thrust ridge backthrusted against the basement slope of the volcanic arc edifice. Sediments coming from the growing orogenic wedge are trapped in the trough developed between its backpart and the topographic high of the new rising ridge. A syn-collisional orogenic basin develops which structural evolution characterizes the progressive shortening of the forearc domain. Most of the deformation and tectonic events recorded offshore or onland in the complex area south of Taiwan can be explained using results of our specific modeling which well describe the tectonic processes associated with continental subduction under a volcanic are.
ISSN: 0040-1951

hal-00420080
https://hal.archives-ouvertes.fr/hal-00420080
DOI : 10.1016/j.tecto.2007.11.016

Éditeur(s) : HAL CCSD Lambert Academic Publishing
Résumé : The Himalaya-Tibet system is considered as the classical case of continental collision. Nonetheless, some fundamental questions concerning its structure, as well as physical processes influencing its evolution are still pending. This book presents several advances in the subject matter. Based on new high-resolution geophysical data from the field, combined with robust imaging techniques, the structure of the collision is revealed in detail: the underplating of India beneath half of Tibet, as well as the geometry of the surface along which this happens. Various numerical modelling techniques allow to discuss physical processes at work in the collision zone, such as the rheology of the India plate whose strong mantle supports the Himalayas, or the metamorphic reactions at depth emphasizing the role of water. We recommend this book to Earth Scientists in a broader sense. While specialists in seismology or modelling can thumb technical details, all Readers can get an interdisciplinary overview of mountain building in the Himalayas, with a retrospective outlook on early day explorers and the dawn of some classical geological principles.
https://hal.archives-ouvertes.fr/hal-00854592

ISBN : 978-3838323534
hal-00854592
https://hal.archives-ouvertes.fr/hal-00854592