Éditeur(s) : HAL CCSD
Résumé : Atmospheric carbon dioxide records indicate that the land surface has acted as a strong global carbon sink over recent decades, with a substantial fraction of this sink probably located in the tropics, particularly in the Amazon. Nevertheless, it is unclear how the terrestrial carbon sink will evolve as climate and atmospheric composition continue to change. Here we analyse the historical evolution of the biomass dynamics of the Amazon rainforest over three decades using a distributed network of 321 plots. While this analysis confirms that Amazon forests have acted as a long-term net biomass sink, we find a long-term decreasing trend of carbon accumulation. Rates of net increase in above-ground biomass declined by one-third during the past decade compared to the 1990s. This is a consequence of growth rate increases levelling off recently, while biomass mortality persistently increased throughout, leading to a shortening of carbon residence times. Potential drivers for the mortality increase include greater climate variability, and feedbacks of faster growth on mortality, resulting in shortened tree longevity. The observed decline of the Amazon sink diverges markedly from the recent increase in terrestrial carbon uptake at the global scale, and is contrary to expectations based on models.
ISSN: 1476-4687

hal-01204223
https://hal.archives-ouvertes.fr/hal-01204223
DOI : 10.1038/nature14283
PRODINRA : 294797
PUBMED : 25788097

Éditeur(s) : HAL CCSD Wiley
Résumé : Outcrossing rates, pollen dispersal and male mating success were assessed in Dicorynia guianensis Amshoff, a neotropical tree endemic to the Guiana shield. All adult trees within a continuous area of 40 ha (n = 157) were mapped, and were genotyped with six microsatellite loci. In addition, progenies were genotyped from 22 mature trees. At the population level, the species was mostly outcrossing (tm = 0.89) but there was marked variation among individuals. One tree exhibited mixed mating, confirming earlier results obtained with isozymes that D. guianensis can tolerate selfing. A Bayesian extension of the fractional paternity method was used for paternity analysis, and was compared with the neighbourhood method used widely for forest trees. Both methods indicated that pollen dispersal was only weakly related to distance between trees within the study area, and that the majority (62%) of pollen came from outside the study stand. Using maximum likelihood, male potential population size was estimated to be 1119, corresponding to a neighbourhood size of 560 hectares. Male mating success was, however, related to the diameter of the stem and to flowering intensity assessed visually. The mating behaviour of D. guianensis is a combination of long-distance pollen flow and occasional selfing. The species can still reproduce when it is extremely rare, either by selfing or by dispersing pollen at long distances. These results, together with the observation that male mating success was correlated with the size of the trees, could be implemented in management procedures aiming at regenerating the species
ISSN: 0962-1083

hal-01032227
https://hal.archives-ouvertes.fr/hal-01032227
DOI : 10.1111/j.1365-294X.2004.02127.x

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
The main goal of the monitoring stage of Carbon Capture and Storage (CCS) is to obtain an accurate estimation of the subsurface CO2 accumulation and to detect any possible leakage. Laboratory experiments are necessary to investigate the small scale processes governing the CO2–brine–rock interaction. They also provide a means to calibrate the results coming from field scale geophysical methods. In this work we set up an experimental system which is able to perform Electrical Resistivity Tomography (ERT) measurements on centimeter-scale rock samples at various P–T conditions. We present the results of two new experiments related to CO2 monitoring, performed on a cylindrical (4 × 8 cm) Fontainebleau rock sample. In the first one, we have quantified the CO2 saturation at different volume fractions, representing zones from a deep saline aquifer with varying degrees of saturation. In the second one, we have monitored and quantified the effect of CO2 dissolution in the brine at a pressure of 40 bar during eight days, emulating the invasion of CO2 into a shallow aquifer. Results highlight the importance of accounting for the contribution of surface conductivity in highly CO2-saturated regions, even in clay-free rocks, and also for brine conductivity variation due to CO2 dissolution. Ignoring any of these effects will end up in a CO2 saturation underestimation. We present a modified CO2 saturation equation to account for these two influences.
ISSN: 0926-9851

hal-01356323
https://hal.archives-ouvertes.fr/hal-01356323
DOI : 10.1016/j.jappgeo.2016.03.039

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Recent research has demonstrated the importance of dermal exposure for some semivolatile organic compounds (SVOCs) present in the gas phase of indoor air. Though models for estimating dermal intake from gaseous SVOCs exist, their predictions can be subject to variations in input parameters, which can lead to large variation in exposure estimations. In this sensitivity analysis for a steady state model, we aimed to assess these variations and their determinants using probabilistic Monte Carlo sampling for 8 SVOCs from different chemical families: phthalates, bisphenols, polycyclic aromatic hydrocarbons (PAHs), organophosphorus (OPs), organochlorines (OCs), synthetic musks, polychlorinated biphenyls (PCBs) and polybromodiphenylethers (PBDEs). Indoor SVOC concentrations were found to be the most influential parameters. Both Henry's law constant (H) and octanol/water partition coefficient (Kow) uncertainty also had significant influence. While exposure media properties such as volume fraction of organic matter in the particle phase (fom-part), particle density (ρpart), concentration ([TSP]) and transport coefficient (ɣd) had a slight influence for some compounds, human parameters such as body weight (W), body surface area (A) and daily exposure (t) make a marginal or null contribution to the variance of dermal intake for a given age group. Inclusion of a parameter sensitivity analysis appears essential to reporting uncertainties in dermal exposure assessment.
ISSN: 0160-4120

hal-01526430
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01526430
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01526430/file/Dermal%20absorption%20of%20semivolatile%20organic%20compounds_accepted.pdf
DOI : 10.1016/j.envint.2017.02.005
PUBMED : 28249739

Éditeur(s) : HAL CCSD AGU and the Geochemical Society
Résumé : International audience
The ODP/IODP multileg campaign at ODP Site 1256 (Cocos plate, eastern equatorial Pacific) provides the first continuous in situ sampling of fast spreading ocean crust from the extrusive lavas, through the sheeted dikes and down into the uppermost gabbros. This paper focuses on a detailed petrographic and microanalytical investigation of the gabbro section drilled during IODP Expedition 312. The marked patchy and spotty features that can be observed in many Hole 1256D gabbros is mostly due to a close association of two different lithological domains in variable amounts: (1) subophitic domains and (2) a granular matrix. Major and trace element mineral compositions, geothermometry, and petrological modeling suggest that subophitic and granular domains follow one single magma evolution trend formed by in situ fractionation. The subophitic domains correspond to the relative primitive, high-temperature end-member, compositionally similar to the basalts and dikes from the extrusive unit upsection, while the granular domains fit with a magma evolution by crystal fractionation to lower temperatures, up to a degree of crystallization of similar to 80%. Our results support the following scenario for the fossilization of the axial melt lens at ODP Site 1256: relatively primitive MORB melts under near-liquidus conditions fill the melt lens and feed the upper, extrusive crust. Near the melt lens-sheeted dike boundary at lower temperatures, crystallization starts with first plagioclase before clinopyroxene in a mushy zone forming the subophitic domains. At decreasing temperatures, the subophitic domains continue to crystallize, finally forming a well-connected framework. Evolved, residual melt is finally trapped within the subophitic network, crystallizing at near-solidus conditions to the granular matrix. Another important textural feature in Hole 1256D gabbros is the presence of microgranular domains which are interpreted as relics of stoped/assimilated sheeted dikes (transformed to "granoblastic dikes" by contact metamorphism). All these different domains can be observed in close association, often at the thin section scale, demonstrating the extremely complex petrological record of combined crystallization/assimilation processes ongoing in the axial melt lens. Very similar gabbros with a marked spotty/patchy appearance, and bearing the same close association of lithological domains as observed at Site 1256, are known in the so-called "varitextured gabbro" unit from the Oman Ophiolite located at the same structural level, between cumulate gabbros and granoblastic dikes. The close petrological similarity of the gabbro/dike transition between both IODP Hole 1256D and the Oman ophiolite suggests that in situ fractionation and dike assimilation/contamination are major magmatic processes controlling the dynamics and fossilization of the axial melt lens at fast spreading oceanic ridges.
ISSN: 1525-2027

hal-00644798
https://hal.archives-ouvertes.fr/hal-00644798
DOI : 10.1029/2011GC003655

Éditeur(s) : HAL CCSD Springer Verlag (Germany) Springer Verlag
Résumé : Dihydroceramide ?4-desaturase 1 (DES1) catalyzes the last step of the de novo ceramide biosynthesis, which consists of the introduction of a trans ?4-double bond in the carbon chain of the dihydroceramide. It was previously observed that myristic acid binds DES1 through N-myristoylation. This N-terminal modification significantly increased the activity of the recombinant DES1 in COS-7 cells and targeted part of the enzyme initially present in the endoplasmic reticulum to the mitochondrial outer membrane, leading to an increase in ceramide levels. Since these results were obtained in a recombinant COS-7 cell model with high expression of rat DES1, the purpose of the present study was to investigate if the native DES1 enzyme was really upregulated by its N-myristoylation in cultured rat hepatocytes. We first showed that DES1 was the main dihydroceramide desaturase isoform expressed in rat hepatocytes. In this model, the wild-type myristoylable recombinant form of rat DES1 was found in both the endoplasmic reticulum and the mitochondria whereas the mutated non-myristoylable recombinant form (N-terminal glycine replaced by an alanine) was almost exclusively localized in the endoplasmic reticulum, which evidenced the importance of the myristoylation. Then, we showed that compared to other fatty acids, myristic acid was the only one to increase native DES1 activity, in both total cell lysates and mitochondrial fractions. The myristic acid-associated increase in DES1 activity was not linked to elevated mRNA or protein expression but more likely to its N-terminal myristoylation. Finally, the myristic acid-associated increase in DES1 activity slightly enhanced the number of apoptotic cells.
ISSN: 0024-4201

hal-00808026
https://hal-agrocampus-ouest.archives-ouvertes.fr/hal-00808026
DOI : 10.1007/s11745-011-3638-x

Éditeur(s) : Amer Geophysical Union
Résumé : The meridional transport of salt in the Atlantic ocean is an important process for climate, controlling the stability of the meridional overturning circulation. The contribution of transient eddies to this transport is quantified in an eddy resolving North Atlantic model at 1/12 degrees resolution (NATL12), and compared with lower resolution North-Atlantic and global 1/4 degrees models. In NATL12 between 10 degrees N and 40 degrees N, there is a volume loss by evaporation of 0.6 Sverdrups (Sv). The divergence of the eddy flux of salt (normalized by a reference salinity of 34.8) is 0.2 Sv over the region, a significant fraction of the total air-seawater exchange, but it is compensated by an opposite convergent transport of salt by the mean flow, so that the total transport of salt is small. The compensation between eddy and mean salt transport is almost complete in a multicentury long global model experiment, but less effective in NATL12 because the short integration time does not allow the salt content to equilibrate and the model drift is large. Eddies arising from baroclinic instability contribute to the meridional salt transports at the northern and southern boundary of the subtropical gyre, where they appear consistent with a lateral diffusion acting on the mean salinity gradient. However, the eddy transport of salt is the sum of two terms: an advective contribution (arising from the correlations of velocity and isopycnal thicknesses) and a diffusion along isopycnals. Both components have the same amplitude at the southern boundary of the subtropical gyre, while diffusion is dominant at the northern boundary.
Journal Of Geophysical Research-oceans (0148-0227) (Amer Geophysical Union), 2012-05 , Vol. 117 , N. C05010 , P. 19 pp.

Droits : 2012 AGU
http://archimer.ifremer.fr/doc/00083/19441/17052.pdf
DOI:10.1029/2012JC007927
http://archimer.ifremer.fr/doc/00083/19441/

Éditeur(s) : HAL CCSD Wiley
Résumé : International audience
We report trace element analyses from mineral phases in chondrules from carbonaceous chondrites (Vigarano, Renazzo, and Acfer 187), carried out by laser ablation inductively coupled plasma-mass spectrometry. Results are similar in all three meteorites. Mesostasis has rare earth element (REE) concentrations of 10-20 × CI. Low-Ca pyroxene has light REE (LREE) concentrations near 0.1 × CI and heavy REE (HREE) near 1 × CI, respectively. Olivine has HREE concentrations at 0.1-1 × CI and LREE around 10−2 × CI. The coarsest olivine crystals tend to have the most fractionated REE patterns, indicative of equilibrium partitioning. Low-Ca pyroxene in the most pyroxene-rich chondrules tends to have the lowest REE concentrations. Type I chondrules seem to have undergone a significant degree of batch crystallization (as opposed to fractional crystallization), which requires cooling rates slower than 1-100 K h−1. This would fill the gap between igneous calcium-aluminum-rich inclusions (CAIs) and type II chondrules. The anticorrelation between REE abundances and pyroxene mode may be understood as due to dilution by addition of silica to the chondrule melt, as in the gas-melt interaction scenario of Libourel et al. (2006). The rapid cooling rate (of the order of 1000 K h−1) which seems recorded by low-Ca pyroxene, contrasted with the more diverse record of olivine, may point to a nonlinear cooling history or suggest that formation of pyroxene-rich chondrule margins was an event distinct from the crystallization of the interior.
ISSN: 1086-9379

hal-00795434
https://hal.archives-ouvertes.fr/hal-00795434
DOI : 10.1111/maps.12005

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
At oceanic spreading centers, interactions between magma and hydrothermal convecting systems trigger major physical, thermal, and chemical exchanges. The two-pyroxene hornfels recovered from the base of the sheeted dike sequence at Integrated Ocean Drilling Program (IODP) Site 1256 (equatorial Eastern Pacific) are interpreted as a conducting boundary layer between the underlying axial melt lens and the hydrothermally cooled sheeted dikes. They are cut by numerous small, felsic veins, which were recently interpreted as a product of hydrous partial melting of sheeted dikes. Here, we present trace element compositions of products (melts and residues) of hydrous partial melting experiments using basalts and hornfels from IODP Site 1256 as starting material. The experimental products generated between 910 °C and 970 °C match the natural lithologies from Site 1256 in terms of major and trace element compositions. The compositions of the anatectic melts correspond to the compositions of the felsic veins, while the residual minerals match the compositions of the two-pyroxene hornfels, evidencing that hydrous partial melting is an important magmatic process in the gabbro/dike transition of fast-spreading mid-oceanic ridges. Our results complement previous experimental studies on anatectic processes occurring at the roof of the magma chambers from fast-spreading mid-ocean ridges. Moreover, calculations of mixing and assimilation fractional crystallization using the experimental partial melts as contaminant/assimilant showed that anatectic melts can only be a minor contributor to the contamination process.
ISSN: 0024-4937

hal-01419949
https://hal.archives-ouvertes.fr/hal-01419949
DOI : 10.1016/j.lithos.2016.05.001