Éditeur(s) : HAL CCSD Springer Verlag
Résumé : Plant litter diversity effects on decomposition rates are frequently reported, but with a strong bias towards temperate ecosystems. Altered decomposition and nutrient recycling with changing litter diversity may be particularly important in tree species-rich tropical rainforests on nutrient-poor soils. Using 28 different mixtures of leaf litter from 16 Amazonian rainforest tree species, we tested the hypothesis that litter mixture effects on decomposition increase with increasing functional litter diversity. Litter mixtures and all single litter species were exposed in the field for 9 months using custom-made microcosms with soil fauna access. In order to test the hypothesis that the long-term presence of tree species contributing to the litter mixtures increases mixture effects on decomposition, microcosms were installed in a plantation at sites including the respective tree species composition and in a nearby natural forest where these tree species are absent. We found that mixture decomposition deviated from predictions based on single species, with predominantly synergistic effects. Functional litter diversity, defined as either richness, evenness, or divergence based on a wide range of chemical traits, did not explain the observed litter mixture effects. However, synergistic effects in litter mixtures increased with the long-term presence of tree species contributing to these mixtures as the home field advantage hypothesis assumes. Our data suggest that complementarity effects on mixed litter decomposition may emerge through long-term interactions between aboveground and belowground biota.
ISSN: 0029-8549

hal-01032393
https://hal.archives-ouvertes.fr/hal-01032393
DOI : 10.1007/s00442-011-1966-4

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Ocean island basalts (OIB) from the Comores archipelago (Indian Ocean) display mineralogical and geochemical features different from the other Indian OIB. We present here new geochronological data (40Ar/39Ar), major and trace element compositions and isotopic (Sr, Nd, Pb) ratios of silica-undersaturated alkaline rocks from Mayotte, the oldest island of the Comores. Two trends are defined using major element composition: (1) a highly silica-undersaturated trend which includes basanites, (melilite-bearing) nephelinites, intermediate lavas and phonolites from the southern part of the island and (2) a moderately silica-undersaturated trend which is mainly represented by alkali basalts, basanites, intermediate lavas and phonolites from the northern part of the island. Both trends could be explained, to some extent, by variable degrees of partial melting. Normative larnite-bearing olivine melilitites and nephelinites exhibit, in addition to their high silica-undersaturation, elevated concentrations in CaO (>12wt.%) and P2O5 (up to 1.35wt.%). These exceptional rocks would result from low degree deep partial melting of a CO2-metasomatized source in the presence of carbonate (probably dolomite) and apatite. Igneous rocks from southern and northwestern shield volcanoes are characterized by a radiogenic Pb composition, revealing the existence of a HIMU (high μ=238U/204Pb) component in their source. Its influence decreases from the main building stage (>10.6-~3.0Ma) to the post-shield stage for the benefit of a depleted MORB-mantle (DMM) component, especially in the north central rocks. This feature would reflect increasing melting degrees of the depleted dominant source, bearing small-scale HIMU heterogeneities progressively consumed with time. The HIMU signature might have been introduced in the Comorian lithospheric mantle by thermal erosion or delamination of a continental lithosphere during the Gondwana break-up. The other islands of the Comores archipelago (Moheli, Anjouan and "La Grille" type lavas from Grande Comore) display also a DMM-HIMU mixing trend. Only a few lavas from Grande Comore ("Karthala" type) and one sample from Mayotte show the clear EM1 contribution (87Sr/86Sr>0.7035) of the Comorian plume.
ISSN: 0024-4937

insu-01089376
https://hal-insu.archives-ouvertes.fr/insu-01089376
https://hal-insu.archives-ouvertes.fr/insu-01089376/document
https://hal-insu.archives-ouvertes.fr/insu-01089376/file/Pelleter%20et%20al%201.pdf
DOI : 10.1016/j.lithos.2014.09.012

Éditeur(s) : HAL CCSD Wiley
Résumé : [b]1.[/b] Plant functional traits, in particular specific leaf area (SLA), wood density and seed mass, are often good predictors of individual tree growth rates within communities. Individuals and species with high SLA, low wood density and small seeds tend to have faster growth rates.[br/][br/][b]2.[/b] If community-level relationships between traits and growth have general predictive value, then similar relationships should also be observed in analyses that integrate across taxa, biogeographic regions and environments. Such global consistency would imply that traits could serve as valuable proxies for the complex suite of factors that determine growth rate, and, therefore, could underpin a new generation of robust dynamic vegetation models. Alternatively, growth rates may depend more strongly on the local environment or growth–trait relationships may vary along environmental gradients.[br/][br/][b]3.[/b] We tested these alternative hypotheses using data on 27 352 juvenile trees, representing 278 species from 27 sites on all forested continents, and extensive functional trait data, 38% of which were obtained at the same sites at which growth was assessed. Data on potential evapotranspiration (PET), which summarizes the joint ecological effects of temperature and precipitation, were obtained from a global data base.[br/][br/][b]4.[/b] We estimated size-standardized relative height growth rates (SGR) for all species, then related them to functional traits and PET using mixed-effect models for the fastest growing species and for all species together.[br/][br/][b]5.[/b] Both the mean and 95th percentile SGR were more strongly associated with functional traits than with PET. PET was unrelated to SGR at the global scale. SGR increased with increasing SLA and decreased with increasing wood density and seed mass, but these traits explained only 3.1% of the variation in SGR. SGR–trait relationships were consistently weak across families and biogeographic zones, and over a range of tree statures. Thus, the most widely studied functional traits in plant ecology were poor predictors of tree growth over large scales.[br/][br/][b]6.[/b] Synthesis. We conclude that these functional traits alone may be unsuitable for predicting growth of trees over broad scales. Determining the functional traits that predict vital rates under specific environmental conditions may generate more insight than a monolithic global relationship can offer.
ISSN: 0022-0477

hal-01204226
https://hal.archives-ouvertes.fr/hal-01204226
DOI : 10.1111/1365-2745.12401
PRODINRA : 307144

Éditeur(s) : HAL CCSD American Society for Biochemistry and Molecular Biology
Résumé : International audience
alpha- and beta-spectrins are components of molecular scaffolds located under the lipid bilayer and named membrane skeletons. Disruption of these scaffolds through mutations in spectrins demonstrated that they are involved in the membrane localization or the maintenance of proteins associated with them. The ubiquitous alphaII-spectrin chain bears in its central region a unique domain that is sensitive to several proteases such as calpains or caspases. The conservation of this region in vertebrates suggests that the proteolysis of alphaII-spectrin by these enzymes could be involved in important functions. To assess the role of alphaII-spectrin cleavage in vivo, we generated a murine model in which the exons encoding the region defining this cleavage sensitivity were disrupted by gene targeting. Surprisingly, homozygous mice expressing this mutant alphaII-spectrin appeared healthy, bred normally, and had no histological anomaly. Remarkably, the mutant alphaII-spectrin assembles correctly into the membrane skeleton, thus challenging the notion that this region is required for the stable biogenesis of the membrane skeleton in nonerythroid cells. Our finding also argues against a critical role of this particular alphaII-spectrin cleavage in either major cellular functions or in normal development.
ISSN: 0021-9258

inserm-00284621
http://www.hal.inserm.fr/inserm-00284621
http://www.hal.inserm.fr/inserm-00284621/document
http://www.hal.inserm.fr/inserm-00284621/file/Meary_-_JBC_2007.pdf
PUBMED : 17374614

Éditeur(s) : HAL CCSD Société géologique de France
Résumé : National audience
Late Triassic submarine alkali basalts and hawaiites were collected from two superimposed tectonic slices belonging to the Kara Dere – Sayrun unit of the Middle Antalya nappes, southwestern Turkey. New determinations on conodont faunas allow to date this sequence to the Lower Carnian (Julian). The volcanic rocks show rather homogeneous compositions, with high TiO2 and relatively low MgO and Ni contents which suggest olivine fractionation. Their primitive mantle-normalised multi-elements plots show Nb and Ta enrichments relative to La, Pb negative anomalies and heavy rare earth element and Y depletions typical of intraplate ocean island basalts. These characteristics are consistent with the major and trace element compositions of their primary clinopyroxene phenocrysts, which do not show any feature ascribable to crustal contamination. The studied lavas display a restricted range of {varepsilon}Nd (+4.6 to +5.2) which falls within the range of ocean island basalts. Their initial (143Nd/144Nd)i ratios are too low to be explained by a simple mixing line between depleted MORB mantle (DMM) and HIMU components. Their Pb and Nd isotopic compositions plot along a mixing line between HIMU component and an enriched mantle, the composition of which could be the result of the addition of about 5 to 8% of an EM2 component (recycled marine sediments) to DMM. The lack of evidence for any continental crustal component in their genesis could be consistent with their emplacement in an intra-oceanic setting.
EISSN: 1777-5817

insu-00338829
https://hal-insu.archives-ouvertes.fr/insu-00338829
DOI : 10.2113/gssgfbull.179.4.397

Éditeur(s) : HAL CCSD
Résumé : International audience
Alkaloids extract of Aspidosperma album was tested as corrosion inhibitor for C38 steel in 1 M HCl by using polarization and electrochemical impedance spectroscopy (EIS). Potentiodynamic polarization curves indicated that the plant extract behaves as mixed-type inhibitors. Impedance measurements showed that the double-layer capacitance decreased and charge-transfer resistance increased with increase in the inhibitors concentration and hence increasing in inhibition efficiency. The effect of temperature on the corrosion behavior of C38 steel in 1 M HCl with and without addition of plant extract was studied in the temperature range 25 – 55 °C. The adsorption of the inhibitor molecules was in accordance with the Langmuir adsorption isotherm. The results obtained show that this plant extract could serve as an effective inhibitor for the corrosion of C38 steel in hydrochloric acid.
International journal of electrochemical science

hal-01097107
https://hal-agroparistech.archives-ouvertes.fr/hal-01097107

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
The eastern part of the Cordillera Occidental of Ecuador comprises thick buoyant oceanic plateaus associated with island-arc tholeiites and subduction-related calc-alkaline series, accreted to the Ecuadorian Continental Margin from Late Cretaceous to Eocene times. One of these plateau sequences, the Guaranda Oceanic Plateau is considered as remnant of the Caribbean–Colombian Oceanic Province (CCOP) accreted to the Ecuadorian Margin in the Maastrichtien. Samples studied in this paper were taken from four cross-sections through two arc-sequences in the northern part of the Cordillera Occidental of Ecuador, dated as (Río Cala) or ascribed to (Macuchi) the Late Cretaceous and one arc-like sequence in the Chogòn-Colonche Cordillera (Las Orquídeas). These three island-arcs can clearly be identified and rest conformably on the CCOP. In all four localities, basalts with abundant large clinopyroxene phenocrysts can be found, mimicking a picritic or ankaramitic facies. This mineralogical particularity, although not uncommon in island arc lavas, hints at a contribution of the CCOP in the genesis of these island arc rocks. The complete petrological and geochemical study of these rocks reveals that some have a primitive island-arc nature (MgO values range from 6 to 11 wt.%). Studied samples display marked Nb, Ta and Ti negative anomalies relative to the adjacent elements in the spidergrams characteristic of subduction-related magmatism. These rocks are LREE-enriched and their clinopyroxenes show a tholeiitic affinity (FeOT–TiO2 enrichment and CaO depletion from core to rim within a single crystal). The four sampled cross-sections through the island-arc sequences display homogeneous initial Nd, and Pb isotope ratios that suggest a unique mantellic source for these rocks resulting from the mixing of three components: an East-Pacific MORB end-member, an enriched pelagic sediment component, and a HIMU component carried by the CCOP. Indeed, the ankaramite and Mg-basalt sequences that form part of the Caribbean-Colombian Oceanic Plateau are radiogenically enriched in 206Pb/204Pb and 207Pb/204Pb and contain a HIMU component similar to that observed in the Gorgona basalts and Galápagos lavas. The subduction zone that generated the Late Cretaceous arcs occurred far from the continental margin, in an oceanic environment. This implies that no terrigenous detrital sediments interacted with the source at this period. Thus, the enriched component can only result from the melting of subducted pelagic sediments. We have thus defined the East-Pacific MORB, enriched (cherts, pelagic sediments) and HIMU components in an attempt to constrain and model the genesis of the studied island-arc magmatism, using a compilation of carefully selected isotopic data from literature according to rock age and paleogeographic location at the time of arc edification. Tripolar mixing models reveal that proportions of 12–15 wt.% of the HIMU component, 7–15 wt.% of the pelagic sediment end-member and 70–75 wt.% of an East-pacific MORB end-member are needed to explain the measured isotope ratios. These surprisingly high proportions of the HIMU/CCOP component could be explained by the young age of the oceanic plateau (5–15 Ma) during the Late Cretaceous arc emplacement. The CCOP, basement of these arc sequences, was probably still hot and easily assimilated at the island-arc lava source.
ISSN: 0895-9811

insu-00353692
https://hal-insu.archives-ouvertes.fr/insu-00353692
DOI : 10.1016/j.jsames.2008.06.003

Éditeur(s) : HAL CCSD BioMed Central
Résumé : International audience
UNLABELLED: ABSTRACT: BACKGROUND: Malaria is a major health issue in French Guiana. Amerindian communities remain the most affected. A previous study in Camopi highlighted the predominant role of environmental factors in the occurrence of malaria. However, all parameters involved in the transmission were not clearly identified. A new survey was conducted in order to clarify the risk factors for the presence of malaria cases in Camopi. METHODS: An open cohort of children under seven years of age was set up on the basis of biologically confirmed malaria cases for the period 2001-2009. Epidemiological and observational environmental data were collected using two structured questionnaires. Data were analysed with a multiple failures multivariate Cox model. The influence of climate and the river level on malaria incidence was evaluated by time-series analysis. Relationships between Anopheles darlingi human biting rates and malaria incidence rates were estimated using Spearman's rank correlation. RESULTS: The global annual incidence over the nine-year period was 238 per 1,000 for Plasmodium falciparum, 514 per 1,000 for Plasmodium visa and 21 per 1,000 for mixed infections. The multivariate survival analysis associated higher malaria incidence with living on the Camopi riverside vs. the Oyapock riverside, far from the centre of the Camopi hamlet, in a home with numerous occupants and going to sleep late. On the contrary, living in a house cleared of all vegetation within 50 m and at high distance of the forest were associated with a lower risk. Meteorological and hydrological characteristics appeared to be correlated with malaria incidence with different lags. Anopheles darlingi human biting rate was also positively correlated to incident malaria in children one month later. CONCLUSIONS: Malaria incidence in children remains high in young children despite the appearance of immunity in children around three years of age. The closeness environment but also the meteorological parameters play an important role in malaria transmission among children under seven years of age in Camopi.
ISSN: 1475-2875

inserm-00633771
http://www.hal.inserm.fr/inserm-00633771
http://www.hal.inserm.fr/inserm-00633771/document
http://www.hal.inserm.fr/inserm-00633771/file/1475-2875-10-246.pdf
DOI : 10.1186/1475-2875-10-246

Éditeur(s) : Université de Bretagne Occidentale
Résumé : The magmatology of Mount Pelée is characterized by the competition between two major petrogenetic processes : Iractional crystallization and magma mixing. The important volcanic hazards associated with this volcano make the interest of the study: the existence of accurate datas about its geology and the chronology of its eruptions is favorable to a magmatologic study. The aim of this work, carried out within the framework of the PIRPSEV, is to determine the relative importance of the petrogenetic processes involved during the volnano history and then to conclude about the functioning of the underlying magma chambers. It is found upon the petrographical, mineralogical and geochemical characteristics of the ejecta of Mount Pelée. NOT CONTROLLED OCR
La magmatologie de la Montagne Pelée est caractérisée par la compétition entre deux processus pétrogénétiques : la cristallisation fractionnée et le mélange magmatique. L'intérêt de l'étude de cet édifice réside dans l'importance considérable des risques volcaniques qui lui sont associés; l'existence de données très précises sur sa géologie et sur la chronologie de ses éruptions offre un cadre favorable à une étude magmatologique. Le présent travail, réalisé dans le cadre du PIRPSEV, vise à déterminer, à partir de l'ensemble des caractéristiques pétrographiques, minéralogiques et géochimiques des matériaux volcaniques de la Montagne Pelée, l'importance relative des processus pétrogénétiques impliqués au cours de l'histoire de ce volcan, et d'en tirer des conclusions sur le fonctionnement des réservoirs magmatiques sous-jacents. OCR NON CONTRÔLE

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/1986/these-3752.PDF
http://archimer.ifremer.fr/doc/00000/3752/

Éditeur(s) : HAL CCSD Springer Verlag/EDP Sciences
Résumé : International audience
Key message: Genetic diversity appears to be unaffected by disturbance in a stand of the light-demanding Neotropical treeV. michelii. Although spatial genetic structure is modified in post-disturbance cohorts, mixing of seeds from different mother trees in canopy gaps appears to efficiently maintain genetic admixture. Context: The interplay between genetic and demographic processes has major consequences on population viability. Population size affects demographic trends, while genetic diversity insures viability by reducing risks of inbreeding depression and by maintaining adaptive potential. Yet, the consequences of increases in census size (as opposed to effective size) on genetic diversity of forest populations are poorly known. Aims: We have studied the structure of genetic diversity in populations of saplings of the light-responsive tree, Virola michelii (Myristicaceae, the nutmeg family), in two plots having undergone different levels of canopy-gap opening disturbance. This allowed us to test the “intermediate disturbance” hypothesis, which generally applies to species diversity, at the intra-specific scale. Methods: Levels and distribution of genetic diversity were compared between plots and between life stages. Sapling parentage was analysed to infer each adult tree’s contribution to regeneration. Results: Genetic diversity was higher, and spatial genetic structure was stronger in the post-disturbance than in the control seedling population. Parentage analysis suggested that a limited number of parents contributed to most of the regeneration, but that efficient mixing of their progeny may have enhanced the diversity of saplings occupying canopy gaps. Conclusion: A mixture of demo-genetic processes may contribute to maintain genetic diversity in spite of, or possibly due to, ecosystem disturbance in V. michelii.
ISSN: 1286-4560

hal-01502942
https://hal-agroparistech.archives-ouvertes.fr/hal-01502942
https://hal-agroparistech.archives-ouvertes.fr/hal-01502942/document
https://hal-agroparistech.archives-ouvertes.fr/hal-01502942/file/art_10.1007_s13595-015-0508-3-1_%7B869D58F4-272C-491F-A903-DAD6CDBDC042%7D.pdf
DOI : 10.1007/s13595-015-0508-3

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
We investigate the timing of end of motion along the South Tibet Detachment System (STDS), a major normal fault system that runs parallel to the Himalayan range for more than 1500 km. Near Dinggye (similar to 28 degrees 10'N, 87 degrees 40'E), the STD dips similar to 10 +/- 5 degrees to the North and separates Paleozoic Tethyan series from Upper Himalayan Crystalline Series (UHCS). Immediately below the STD, the UHCS is highly deformed in the STD shear zone, lineations trend NNE and the shear senses are top to the NE. In micaschist, the P-T path constrained by pseudosection and garnet chemistry, shows successive metamorphic conditions of similar to 0.6 GPa and similar to 550 degrees C and 0.5 GPa and 625 degrees C. U/Pb dating of monazites and zircons in deformed and undeformed leucogranites suggests that ductile deformation lasted until at least similar to 16 Ma but ended prior to similar to 15 Ma in the STD shear zone similar to 100 m below the detachment. Ar/Ar micas ages in the footwall span between similar to 14.6 and 13.6 Ma, indicating rapid cooling down to similar to 320 degrees C, and suggesting persistence of normal faulting, at that time. The STDS is cut and offset by the N-S trending Dinggye active normal fault which initiated prior to 11 Ma thus providing a minimum bound for the end of STDS motion. These data are interpreted as reflecting 0.3 GPa (11 km) to 0.6 GPa (22 km) of exhumation along the STDS starting prior to similar to 16 Ma, ending between 13.6 and 11 Ma. The 1000 km long stretch of the STDS east of the Gurla Mandata probably stopped almost synchronously between 13 and 11 Ma ago, coevally with a sudden switch from NNE-SSW to E-W extension at the top of the accretionary prism, with a jump of the major thrust from the lower Main Central Thrust (MCTI) to the Main Boundary Thrust (MBT), and with a change in the India and Asia convergence direction. This synchronism is probably better explained in the frame of a thrust wedge or thrust system model than a lower channel flow model. West of the Gurla Mandata the STDS appears to stop 5 to 3 Ma earlier, possibly related to local interactions with the Karakorum fault in a way that needs to be understood.
ISSN: 0012-821X

hal-00475652
https://hal.archives-ouvertes.fr/hal-00475652
DOI : 10.1016/j.epsl.2009.12.035

Éditeur(s) : HAL CCSD Wiley
Résumé : International audience
We describe the simulation of an exterior problem using a magnetic field deriving from magnetostatics, with a numerical method mixing the approaches of C. I. Goldstein and L.-A. Ying. This method is based on the use of a graded mesh obtained by gluing homothetic layers in the exterior domain. On this mesh, we use an edge elements discretization and a recently proposed mixed formulation. In this paper, we provide both a theoretical and numerical study of the method. We establish an error estimate, describe the implementation, propose some preconditioning techniques and show the numerical results. We also compare these results with those obtained from an equivalent boundary elements approach. In this way, we retain that our method leads to a practical numerical implementation, a saving of storage, and turns out to be an alternative to the classical boundary elements method.
ISSN: 0749-159X

hal-00730196
https://hal.archives-ouvertes.fr/hal-00730196
DOI : 10.1002/num.10064

Éditeur(s) : HAL CCSD Nature Publishing Group
Résumé : International audience
The widely-used herbicide atrazine (ATZ) is detected in ground and surface water in many countries. Several studies in animals have demonstrated that ATZ has endocrine-disrupting effects on male and female reproduction in many vertebrate species. In this study, we investigated the effects of ATZ exposure on meiosis, a key step in gametogenesis in mammals. The treatment was initiated before oocyte entry into meiosis, which occurs during the embryonic period in females. We found that embryonic exposure to ATZ increases the level of 8-oxo-guanine in the nucleus of meiotic cells, reflecting oxidative stress and affecting meiotic double-strand break repair, chromosome synapsis and crossover numbers. Finally, embryonic exposure to ATZ reduces the number of primordial follicles and increases the incidence of multi-oocyte follicles in adult mice. Our data demonstrate that embryonic exposure to ATZ disrupts prophase I of meiosis and affects normal follicle formation in female mice.
ISSN: 2045-2322

hal-01560149
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01560149
DOI : 10.1038/s41598-017-03738-1
PUBMED : 28615648

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
The Chalkidiki block is a major domain in the North Aegean that, contrary to other domains in the region, largely escaped thermal perturbations during Tertiary extension. As a result, the Chalkidiki block is an ideal candidate to glean information related to the timing of Mesozoic thermal events using appropriate geochronological techniques. We have undertaken a laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS) study (U-Th-Pb on monazites and U-Pb on zircons) coupled with 40Ar/39Ar dating on nine samples from various structural levels within the thrust system of the Chalkidiki block. The eastern, and structurally lower part of the system revealed a complete isotopic reset of Carboniferous – Early Triassic monazites coeval with partial monazite destruction, REE-mobilisation and formation of apatite-allanite-epidote coronas at ~ 132 Ma, a reaction that is commonly observed in amphibolite-facies rocks. These coronas formed after crystallisation of garnet (i.e., at T > 580 °C) and, in all probability, either close to the peak-temperature conditions (~ 620 °C) on a prograde path or during retrogression between the peak-temperature and the low-temperature boundary of the amphibolite facies. Cooling of these rocks and arrival at mid-crustal levels occurred at 95–100 Ma. By contrast, the western, and structurally uppermost part of the system went through the same event by 120–125 Ma. Further structural considerations with respect to medium-temperature geochronology data imply that syn-metamorphic thrusting must have ceased by early Late Cretaceous. We emphasize that, with the sole exception of the Chalkidiki block, no pre-45 Ma medium-temperature geochronology data are preserved in other North Aegean domains, a feature that is clearly related to the extension-induced thermal perturbation of the region during the Tertiary.
ISSN: 0040-1951

insu-01329472
https://hal-insu.archives-ouvertes.fr/insu-01329472
https://hal-insu.archives-ouvertes.fr/insu-01329472/document
https://hal-insu.archives-ouvertes.fr/insu-01329472/file/kydonakis-tectono-2016.pdf
DOI : 10.1016/j.tecto.2016.06.006

Éditeur(s) : HAL CCSD Institute for Scientific Computing and Information
Résumé : International audience
In this paper, we solve a problem describing the mechanical deformations of a porous medium in the presence of a monophasic linear flow or a two phase nonlinear flow with the purpose of modelizing subsidence of hydrocarbon reservoirs. An essential characteristics of this problem is that the mechanical deformation and the flow have different time scales. In petroleum industry, one uses different very efficient simulators for the flow problem and the mechanical deformations, which enables to handle complex models. Therefore it is necessary to be able to combine as efficiently as possible the exploitation of these simulators. We propose two alternative splitting approaches. The first one is the staggered algorithm used by engineers, which amounts to a Gauss-Seidel method in the one phase linear case. The second approach is based upon the preconditioned conjugate gradient method. We use a numerical multi-scale method in both of these algorithms. We compare these two approaches and we show that the preconditioned conjugate gradient algorithm is faster and more robust than the staggered algorithm. Applying the preconditioned conjugate gradient algorithm therefore seems to compensate for the fact that the inf-sup condition for the mixed discretization method is not satisfied when combining the simulators for the mechanical deformations and for the flow computations.
ISSN: 1705-5105

Droits : http://creativecommons.org/licenses/by/
hal-01449039
https://hal.archives-ouvertes.fr/hal-01449039
https://hal.archives-ouvertes.fr/hal-01449039/document
https://hal.archives-ouvertes.fr/hal-01449039/file/DHLE.pdf

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
In French Guiana, severe cases of toxoplasmosis in immunocompetent patients are associated with atypical strains of Toxoplasma gondii linked to a wild neotropical rainforest cycle and a higher genetic diversity than usually observed for T. gondii isolates from anthropized environment. This raises the question of the impact of anthropization of the natural environment, on genetic diversity and on the population structure of T. gondii. However, few data are available on strains circulating in the anthropized areas from French Guiana. Seropositive animals originating mainly from anthropized sub-urban areas and punctually from wild environment in French Guiana were analyzed for T. gondii isolation and genotyping. Thirty-three strains were obtained by bioassay in mice and compared with 18 previously reported isolates chiefly originating from the Amazon rainforest. The genotyping analysis performed with 15 microsatellite markers located on 12 different chromosomes revealed a lower genetic diversity in the anthropized environment. Results were analyzed in terms of population structure by clustering methods, Neighbor-joining trees reconstruction based on genetic distances, F(ST,) Mantel's tests and linkage disequilibrium. They clearly showed a genetic differentiation between strains associated to the anthropized environment and those associated to the wild, but with some inbreeding between them. The majority of strains from the anthropized environment were clustered into additional lineages of T. gondii that are common in the Caribbean. In conclusion the two environmental populations "wild" and "anthropized" were genetically well differentiated. The anthropization of the environment seems to be accompanied with a decreased diversity of T. gondii associated with a greater structure of the populations. We detected potential interpenetration and genetic exchanges between these two environmental populations. As a higher pathogenicity in human of "wild" genotypes has been described, the interpenetration of both environments leads to hybridization between strains that may be at risk for human health.
ISSN: 1567-1348

pasteur-00654105
https://hal-riip.archives-ouvertes.fr/pasteur-00654105
https://hal-riip.archives-ouvertes.fr/pasteur-00654105/document
https://hal-riip.archives-ouvertes.fr/pasteur-00654105/file/Mercier_et_al_IGE2011.pdf
DOI : 10.1016/j.meegid.2011.05.003

Éditeur(s) : American Geophysical Union
Résumé : We use seismic reflection and rock sample data to propose that the first-order physiography of New Caledonia Trough and Norfolk Ridge formed in Eocene and Oligocene time and was associated with the onset of subduction and back-arc spreading at the Australia-Pacific plate boundary. Our tectonic model involves an initial Cretaceous rift that is strongly modified by Cenozoic subduction initiation. Hence, we are able to explain (1) complex sedimentary basins of inferred Mesozoic age; (2) a prominent unconformity and onlap surface of middle Eocene to early Miocene age at the base of flat-lying sediments beneath the axis of New Caledonia Trough; (3) gently dipping, variable thickness, and locally deformed Late Cretaceous strata along the margins of the trough; (4) platform morphology and unconformities on either side of the trough that indicate a phase of late Eocene to early Miocene uplift to near sea level, followed by rapid Oligocene and Miocene subsidence of similar to 1100-1800 m; and (5) seismic reflection facies tied to boreholes that suggest absolute tectonic subsidence at the southern end of New Caledonia Trough by 1800-2200 m since Eocene time. The Cenozoic part of the model involves delamination and subduction initiation followed by rapid foundering and rollback of the slab. This created a deep (>2 km) enclosed oceanic trough, similar to 2000 km long and 200-300 km across, in Eocene and Oligocene time as the lower crust detached, with simultaneous uplift and local land development along basin flanks. Disruption of Late Cretaceous and Paleogene strata was minimal during this Cenozoic phase and involved only subtle tilting and local reverse faulting or folding. Basin formation was possible through the action of at least one detachment fault that allowed the lower crust to either be subducted into the mantle or exhumed eastward into Norfolk Basin. We suggest that delamination of the lithosphere, with possible mixing of the lower crust back into the mantle, is more widespread than previously thought and may be commonly associated with subduction initiation, such as Cenozoic events in the Mediterranean and western Pacific.
Tectonics (0278-7407) (American Geophysical Union), 2010-03 , Vol. 29 , N. TC2004 , P. 1-16

Droits : Copyright 2010 by the American Geophysical Union.
http://archimer.ifremer.fr/doc/00001/11271/9283.pdf
DOI:10.1029/2009TC002476
http://archimer.ifremer.fr/doc/00001/11271/

Éditeur(s) : HAL CCSD Oxford University Press (OUP)
Résumé : International audience
Hepatocellular carcinoma treatment by arterial infusion of cis-diamminedichloroplatinum-II (cisplatin) exhibits certain therapeutic efficacy. However, optimizations are required and the mechanisms underlying cisplatin proapoptotic effect remain unclear. The mitogen-activated protein kinase (MAPK) pathway plays a key role in cell response to cisplatin and the functional specificity of the isoform MAPK/ERK kinase 1 and 2 (MEK1/2) and ERK1/2 could influence this response. The individual contribution of each kinase on cisplatin-induced death was thus analyzed after a transient or stable specific inhibition by RNA interference in the human hepatocellular carcinoma cells Huh-7 or in knockout mice. We demonstrated here that ERK1 played a predominant role over ERK2 in cisplatin-induced death, whereas MEK1 and MEK2 acted in a redundant manner. Indeed, at clinically relevant concentrations of cisplatin, ERK1 silencing alone was sufficient to protect cells from cisplatin-induced death both in vitro, in Huh-7 cells and ERK1(-/-) hepatocytes, and in vivo, in ERK1-deficient mice. Moreover, we showed that ERK1 activity correlated with the induction level of the proapoptotic BH3-only protein Noxa, a critical mediator of cisplatin toxicity. On the contrary, ERK2 inhibition upregulated ERK1 activity, favored Noxa induction and sensitized hepatocarcinoma cells to cisplatin. Our results point to a crucial role of ERK1 in cisplatin-induced proapoptotic signal and lead us to propose that ERK2-specific targeting could improve the efficacy of cisplatin therapy by increasing ERK1 prodeath functions.
ISSN: 0143-3334

inserm-00814096
http://www.hal.inserm.fr/inserm-00814096
DOI : 10.1093/carcin/bgs317
PUBMED : 23042098

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
High-grade migmatitic and mylonitic gneisses from the Day Nui Con Voi massif in northern Vietnam record temperatures of 760-810 °C at pressures of 6-10 kbars. High temperature conditions have resulted in the development of major element diffusional profiles in garnet. Laser ablation ICP-MS analyses of trace elements indicate that REE and Hf closely followed Rayleigh-like fractionation trends but underwent significant post-crystallization modification. Light REE and to a lesser extent, HREE rim-to-rim zonation profiles show progressive flattening with the decreasing garnet size. Nd and Sm are completely homogenized in the crystals smaller than 1.5 mm, while Lu always preserves variable degrees of core-to-rim concentration gradient. The observed REE patterns are interpreted as resulting from the combination of protracted garnet growth of progressively smaller crystals and intracrystalline diffusion. This had profound influence on Sm-Nd geochronology and resulted in isochron ages ranging from 50 to 32 Ma. The youngest age was obtained for a sample, where all garnet crystals are smaller than 2 mm in which light REE profiles are completely or nearly completely homogenized. Thus, only the youngest age represents geologically meaningful event, and 31.7 ± 0.9 Ma age is interpreted as the best estimate of the resetting episode due to high temperature diffusional homogenization of light REE during early Oligocene metamorphism. Older Sm-Nd ages reflect mixed analyses of variably reset individual garnet crystals. Lu-Hf isotopic analyses of bulk garnet fractions, despite yielding high parent/daughter isotopic ratios appeared very scattered and did not allow defining isochron ages. Instead, apparent ages defined by whole rock and individual garnet fractions range from c. 80 to 160 Ma. Very old apparent ages are interpreted as being the consequence of intracrystalline Lu diffusion and preservation of the original Hf distribution, which leads to lower 176Lu/177Hf ratios, and thus steeper (older) isochrons. Back diffusion of Lu during commonly observed resorption played a subordinate role in modifying isotope systematics.
ISSN: 0009-2541

hal-00813949
https://hal.archives-ouvertes.fr/hal-00813949
DOI : 10.1016/j.chemgeo.2012.04.024

Éditeur(s) : HAL CCSD American Chemical Society
Résumé : International audience
Childhood absence epilepsy is a prototypic form of generalized nonconvulsive epilepsy characterized by short impairments of consciousness concomitant with synchronous and bilateral spike-and-wave discharges in the electroencephalogram. For scientists in this field, the BS/Orl and BR/Orl mouse lines, derived from a genetic selection, constitute an original mouse model "in mirror" of absence epilepsy. The potential of MALDI imaging mass spectrometry (IMS) for the discovery of potential biomarkers is increasingly recognized. Interestingly, statistical analysis tools specifically adapted to IMS data sets and methods for the identification of detected proteins play an essential role. In this study, a new cross-classification comparative design using a combined discrete wavelet transformation-support vector machine classification was developed to discriminate spectra of brain sections of BS/Orl and BR/Orl mice. Nineteen m/z ratios were thus highlighted as potential markers with very high recognition rates (87-99%). Seven of these potential markers were identified using a top-down approach, in particular a fragment of Synapsin-I. This protein is yet suspected to be involved in epilepsy. Immunohistochemistry and Western Blot experiments confirmed the differential expression of Synapsin-I observed by IMS, thus tending to validate our approach. Functional assays are being performed to confirm the involvement of Synapsin-I in the mechanisms underlying childhood absence epilepsy.
ISSN: 1535-3893

hal-00877728
https://hal.archives-ouvertes.fr/hal-00877728
DOI : 10.1021/pr3006974
PUBMED : 22994238