Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
In this paper, we determine dislocation core structures and Peierls stresses of wadsleyite, a high-pressure mineral present in the Earth mantle. We use a Peierls-Nabarro model combined with a finite-element method in which we introduce two-dimensional generalized stacking fault energies. Several potential slip planes of wadsleyite are considered. The results show that dislocations in this mineral can exhibit complex dislocation cores with linear or non-collinear dissociation and even three-dimensional dislocation cores. The calculation of the Peierls stresses gives information on the potential activity of slip systems governing the plasticity of wadsleyite. Our study confirms experimental observations that 1/2 < 1 1 1 >{1 0 1} is the easiest slip system in this structure at high-pressure and that [1 0 0](0 1 0) is the second easiest. Both these easily slip systems have dislocations that dissociate into collinear partial dislocations. In contrast [0 1 0] dislocations with very large Burgers vector (11.2 angstrom) are stabilized by complex dissociations involving four partial dislocations.
ISSN: 1359-6454

hal-00475548
https://hal.archives-ouvertes.fr/hal-00475548
DOI : 10.1016/j.actamat.2009.10.047

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
We explore the use of seismic noise produced by rivers to monitor the bed load transport in the case of a low-discharge braided river in the French Alps: the "torrent de St Pierre". For this purpose, we deployed two dedicated seismic networks during summers 2007 and 2008, for which the characteristics of the recorded continuous signal are similar despite changes in the sensor locations. For dry weather conditions, only melting of nearby glaciers controls the supply of water to the stream. In these conditions, the river hydrology and the seismic energy in the 2-80 Hz frequency band both follow a diurnal fluctuation similar to the thermal amplitude. In contrast during rainfall episodes, the temperature variation fails to explain the hydrodynamic changes. Dense cloud covers reduce glacier melting and the recorded seismic energy denotes bursts of high-frequency seismic noise well correlated with water level data. Comparisons between the recorded seismic signals and the collected hydrological and sediment load data indicate that a frequency band of 3-9 Hz best explains the water level changes and thus the seismic waves coming from the flow turbulence. These analyses also reveal the presence of a seismic noise threshold that might be linked to the water shear stress exerted by the flowing water. Using the seismic energy in this frequency band as a proxy of the fluvial shear stress, the seismic-hydrologic relationship may be sensitive to variations in bed load transport. The spectral content of the seismic energy shows patterns consistent with the mobilization of sediment particles. From the interpretations of the seismic wave attenuation of river sources, we finally propose that stations at a distance from the stream less than 50 m are able to record most sediment particles. Farther stations are still useful during extreme events when largest grain sizes are mobilized. More generally this study demonstrates the feasibility of using the river seismic signal to survey bed load transport in various river types from small braided mountain rivers like the "torrent de St Pierre" to the large entrenched Himalayan rivers.
ISSN: 0022-1694

hal-00644789
https://hal.archives-ouvertes.fr/hal-00644789
DOI : 10.1016/j.jhydrol.2011.07.014

Éditeur(s) : HAL CCSD Springer Verlag (Germany)
Résumé : International audience
Surface displacements due to temporal changes in environmental mass redistributions are observable in the coordinate time series of many Global Navigation Satellite System (GNSS) sites. In this study, we investigated the effect of loading on estimates of tectonic velocity computed from campaign-style GNSS observations. The study region is in the Pyrenees mountain range between France and Spain (ResPyr campaigns). In this area, seismic activity is continuous and moderate and the expected amplitude of the horizontal tectonic velocity is less than 0.5 mm/yr. In order to determine the velocity, 4 sparse GNSS campaigns were carried out from 1995 to 2010. Considering this small rate of deformation, loading phenomena can contribute a non-negligible artifact to the velocity computation that could affect our geodynamical interpretation. In this investigation, we specifically considered the atmospheric, hydrological, and non-tidal ocean loading phenomena. The computed loading deformations for this region show the horizontal displacements are dominated by the non-tidal ocean loading (maximum 4 mm for the North and 3.1 mm for the East components); the main vertical contributions are due to the atmospheric and continental water storage loading (maximum 14.3 for the atmosphere and 8.1 mm for the hydrology, respectively). We have found that the dominant loading effect on the horizontal velocity is the non-tidal ocean loading (mean of 0.11 mm/yr), whereas the vertical component is dominated by the hydrological loading (mean of 0.21 mm/yr). Since the study area is in a mountainous region, we also analyzed the difference between the atmospheric and the topography dependent atmospheric loading models at our GNSS campaign sites. We did not find any significant difference between the two atmospheric loading models in terms of horizontal velocity. Finally, we performed simulations to identify the optimum timing and frequency of future GNSS campaigns in this area that would minimize the loading effects on tectonic velocity estimates.
ISSN: 0039-3169

hal-00963629
https://hal.archives-ouvertes.fr/hal-00963629
DOI : 10.1007/s11200-012-0458-2

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
11 4 : CEA/HC 12 13 Corresponding author: 14 pierre.legoff@cea.fr -+333 80 23 40 00 -+333 80 23 52 09 15 16 Abstract 17 As one of the three natural isotopes of hydrogen, tritium is ubiquitous and might potentially 18 be present in any water or organic molecule that constitutes a biological matrix. Milk is one of 19 the most frequently monitored foodstuffs in the vicinity of chronic release of radionuclides, as 20 it is a very common product and also because it integrates deposition on large areas of grass at 21 a local scale. Different parameters have been studied to assess their impact on the reliability 22 of tritium measurements. The volume of the sample, the technique used to extract the water 23 and the level of dehydration modulate the results but in different ways: dispersion of results, 24 under-or overestimation of the tritium activity. The influence of sample storage and 25 preparation has also been investigated. Methodological improvements of tritium 26 measurements in the free water of milk are proposed. 27 28
ISSN: 0265-931X

hal-01117741
https://hal.archives-ouvertes.fr/hal-01117741
https://hal.archives-ouvertes.fr/hal-01117741/document
https://hal.archives-ouvertes.fr/hal-01117741/file/Tritium%20in%20the%20free%20water%20of%20milk-FINAL.pdf
DOI : 10.1016/j.jenvrad.2013.09.006

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : The core structures of dislocations in diopside have been calculated within the Peierls model, which assumes a planar core. 1/2 < 110 > dislocations can dissociate into two collinear partial dislocations. We show that [001] glide is very difficult in (010) and that a non-collinear dissociation of [001](100) (modelled within a Peierls-Nabarro-Galerkin approach) makes glide equally easy in (100) and {110}. A widely spread core structure corresponding to a low lattice friction has been found for [100](010) and [010](100) dislocations which is not supported by mechanical data and, together with TEM observations, suggests that another, probably non-planar core structure is possible for these dislocations.
ISSN: 0342-1791

hal-00558238
https://hal.archives-ouvertes.fr/hal-00558238
DOI : 10.1007/s00269-010-0370-7

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Isotopic fractionation of tritium is a highly relevant issue in radiation protection and requires certain radioecological considerations. Sound evaluation of this factor is indeed necessary to determine whether environmental compartments are enriched/depleted in tritium or if tritium is, on the contrary, isotopically well-distributed in a given system. The ubiquity of tritium and the standard analytical methods used to assay it may induce biases in both the measurement and the signification that is accorded to the so-called fractionation: based on an exhaustive review of the literature, we show how, sometimes large deviations may appear. It is shown that when comparing the non-exchangeable fraction of organically bound tritium (neOBT) to another fraction of tritium (e.g. tritiated water) the preparation of samples and the measurement of neOBT reported frequently led to underestimation of the ratio of tritium to hydrogen (T/H) in the non-exchangeable compartment by a factor of 5 % to 50 %. In the present study, corrections are proposed for most of the biological matrices studied so far. Nevertheless, the values of isotopic fractionation reported in the literature remain difficult to compare with each other, especially since the physical quantities and units often vary between authors. Some improvements are proposed to better define what should encompass the concepts of exchangeable and non-exchangeable fractions.
ISSN: 0160-4120

hal-01117744
https://hal.archives-ouvertes.fr/hal-01117744
https://hal.archives-ouvertes.fr/hal-01117744/document
https://hal.archives-ouvertes.fr/hal-01117744/file/Article%20review%20discrimination%20isotopique-envoy%C3%A9.pdf
DOI : 10.1016/j.envint.2013.12.020

Éditeur(s) : HAL CCSD BMJ Publishing Group
Résumé : International audience
BACKGROUND: Mutations in the leucine-rich-repeat kinase 2 (LRRK2) gene have been identified in families with autosomal dominant Parkinson's disease (ADPD), the most common of which is the p.G2019S substitution that has been found at varying frequencies worldwide. Because of the size of the LRRK2 gene, few studies have analysed the entire gene in large series of ADPD families. METHODS: We performed extensive mutation analyses of all 51 coding exons of the LRRK2 gene in index cases from 226 Parkinson's disease families compatible with autosomal dominant inheritance, mostly from France (n = 182) and North Africa (n = 14). RESULTS: We found 79 sequence variants, 29 of which were novel. Eight potentially or proven pathogenic mutations were found in 22 probands (9.7%). There were four novel amino acid substitutions that are potentially pathogenic (p.S52F, p.N363S, p.I810V, p.R1325Q) and two novel variants, p.H1216R and p.T1410M, that are probably not causative. The common p.G2019S mutation was identified in 13 probands (5.8%) including six from North Africa (43%). The known heterozygous p.R1441H and p.I1371V mutations were found in two probands each, and the p.E334K variant was identified in one single patient. Most potentially or proven pathogenic mutations were located in the functional domains of the Lrrk2 protein. CONCLUSION: This study leads us to conclude that LRRK2 mutations are a common cause of autosomal dominant Parkinson's disease in Europe and North Africa.
ISSN: 0022-2593

inserm-00529272
http://www.hal.inserm.fr/inserm-00529272
DOI : 10.1136/jmg.2008.062612
PUBMED : 19357115

Éditeur(s) : Actes du Colloque CARHAMB'AR CARtographie des HAbitats Marins Benthiques : de l'Acquisition à la Restitution Ifremer – Centre de Bretagne, 26‐28 mars 2013

Droits : 2013 Ifremer, Agence des Aires Marines Protégées
http://archimer.ifremer.fr/doc/00185/29672/28044.pdf
http://archimer.ifremer.fr/doc/00185/29672/

Éditeur(s) : HAL CCSD Oxford University Press
Résumé : International audience
The BioMart Community Portal (www.biomart.org) is a community-driven effort to provide a unified interface to biomedical databases that are distributed worldwide. The portal provides access to numerous database projects supported by 30 scientific organizations. It includes over 800 different biological datasets spanning genomics, proteomics, model organisms, cancer data, ontology information and more. All resources available through the portal are independently administered and funded by their host organizations. The BioMart data federation technology provides a unified interface to all the available data. The latest version of the portal comes with many new databases that have been created by our ever-growing community. It also comes with better support and extensibility for data analysis and visualization tools. A new addition to our toolbox, the enrichment analysis tool is now accessible through graphical and web service interface. The BioMart community portal averages over one million requests per day. Building on this level of service and the wealth of information that has become available, the BioMart Community Portal has introduced a new, more scalable and cheaper alternative to the large data stores maintained by specialized organizations.
ISSN: 0305-1048

hal-01146849
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01146849
DOI : 10.1093/nar/gkv350
PUBMED : 25897122