Éditeur(s) : HAL CCSD Springer
Résumé : International audience
We present here a synthesis of the evolution of rifted continental margin systems in the Gulf of Aden. These margins are volcanic to the west of the Gulf of Aden, where they are influenced by the Afar hotspot, and non-volcanic east of longitude 46° E. The combined use of magnetics, gravity, seismic reflection, field observations (tectonic, stratigraphic and sedimentological) and oil well data allowed us to obtain better constraints on the timing of continental rifting and seafloor spreading. From the Permo-Triassic to the Oligocene, the Arabian-African plate was subject to distributed extension, probably due, at least from the Cretaceous, to tensile stresses related to the subduction of the Tethysian slab in the north. In Late Eocene-Early Oligocene, 34-33 Ma ago, rifting started to localise along the future area of continental breakup. Initially guided by the inherited basins, continental rifting then occurred synchronously over the entire gulf before becoming localised on the northern and southern borders of the inherited grabens, in the direction of the Afar hotspot. In the areas with non-volcanic margins (in the east), the faults marking the end of rifting trend parallel to the inherited grabens. Only the transfer faults cross-cut the inherited grabens, and some of these faults later developed into transform faults. The most important of these transform faults follow a Precambrian trend. Volcanic margins were formed in the west of the Gulf, up to the Guban graben in the southeast and as far as the southern boundary of the Bahlaf graben in the northeast. Seaward dipping reflectors can be observed on many oil industry seismic profiles. The influence of the hotspot during rifting was concentrated on the western part of the gulf. Therefore, it seems that the western domain was uplifted and eroded at the onset of rifting, while the eastern domain was characterised by more continuous sedimentation. The phase of distributed deformation was followed by a phase of strain localisation during the final rifting stage, just before formation of the Ocean-Continent Transition (OCT), in the most distal graben (DIM graben). About 20 Ma ago, at the time of the continental break-up, the emplacement of the OCT started in the east with exhumation of the subcontinental mantle. Farther west, the system was heated up by the strong influence of the Afar hotspot, which led to breakup with much less extension. In the Gulf of Aden (s.str), up to the Shukra El Sheik fracture zone, oceanic spreading started 17.6 Ma ago. West of this fracture zone, oceanic accretion started 10 Ma ago, and 2 Ma ago in the Gulf of Tadjoura. Post-rift deformation of the eastern margins of the Gulf of Aden can be seen in the distal and proximal domains. Indeed, the substantial post-rift uplift of these margins could be associated with either the continental break-up, or activity of the Afar hotspot and related volcanic/magmatic activity. Uplift of the northern proximal margin was still active (e.g. stepped beach rocks exposed at 60 m of 2 Ma; 30 m of 35,200 years; 10 and 2 m) and active volcanoes can be inferred at depths of between 70 and 200 km beneath the margin (at 5-10 km distance from the coast). On the distal margin, heat flow measurements show a high value that is associated with post-rift volcanic activity and the development of a volcano (with flows and sills) shortly after the formation of the OCT. The Afar hotspot is therefore important for several reasons. It allows the localisation of deformation along the Red Sea/Aden system and the rapid opening of the Gulf after the continental break-up; its influence also seems to persist during the post-rift period.
ISSN: 1866-7411

hal-01053089
https://hal.archives-ouvertes.fr/hal-01053089
DOI : 10.1007/s12517-011-0475-4

Éditeur(s) : HAL CCSD Nature Publishing Group
Résumé : International audience
Meiotic recombination predominantly occurs at discrete genomic loci called recombination hotspots, but the features defining these areas are still largely unknown (reviewed in refs 1-5). To allow a comprehensive analysis of hotspot-associated DNA and chromatin characteristics, we developed a direct molecular approach for mapping meiotic DNA double-strand breaks that initiate recombination. Here we present the genome-wide distribution of recombination initiation sites in the mouse genome. Hotspot centres are mapped with approximately 200-nucleotide precision, which allows analysis of the fine structural details of the preferred recombination sites. We determine that hotspots share a centrally distributed consensus motif, possess a nucleotide skew that changes polarity at the centres of hotspots and have an intrinsic preference to be occupied by a nucleosome. Furthermore, we find that the vast majority of recombination initiation sites in mouse males are associated with testis-specific trimethylation of lysine 4 on histone H3 that is distinct from histone H3 lysine 4 trimethylation marks associated with transcription. The recombination map presented here has been derived from a homogeneous mouse population with a defined genetic background and therefore lends itself to extensive future experimental exploration. We note that the mapping technique developed here does not depend on the availability of genetic markers and hence can be easily adapted to other species with complex genomes. Our findings uncover several fundamental features of mammalian recombination hotspots and underline the power of the new recombination map for future studies of genetic recombination, genome stability and evolution.
ISSN: 0028-0836

hal-00877681
https://hal.archives-ouvertes.fr/hal-00877681
DOI : 10.1038/nature09869
PUBMED : 21460839

Éditeur(s) : HAL CCSD BioMed Central
Résumé : International audience
BACKGROUND: Homologous recombination is the key process that generates genetic diversity and drives evolution. SPO11 protein triggers recombination by introducing DNA double stranded breaks at discreet areas of the genome called recombination hotspots. The hotspot locations are largely determined by the DNA binding specificity of the PRDM9 protein in human, mice and most other mammals. In budding yeast Saccharomyces cerevisae, which lacks a Prdm9 gene, meiotic breaks are formed opportunistically in the regions of accessible chromatin, primarily at gene promoters. The genome-wide distribution of hotspots in this organism can be altered by tethering Spo11 protein to Gal4 recognition sequences in the strain expressing Spo11 attached to the DNA binding domain of the Gal4 transcription factor. To establish whether similar re-targeting of meiotic breaks can be achieved in PRDM9-containing organisms we have generated a Gal4BD-Spo11 mouse that expresses SPO11 protein joined to the DNA binding domain of yeast Gal4. RESULTS: We have mapped the genome-wide distribution of the recombination initiation sites in the Gal4BD-Spo11 mice. More than two hundred of the hotspots in these mice were novel and were likely defined by Gal4BD, as the Gal4 consensus motif was clustered around the centers in these hotspots. Surprisingly, meiotic DNA breaks in the Gal4BD-Spo11 mice were significantly depleted near the ends of chromosomes. The effect is particularly striking at the pseudoautosomal region of the X and Y chromosomes -- normally the hottest region in the genome. CONCLUSIONS: Our data suggest that specific, yet-unidentified factors influence the initiation of meiotic recombination at subtelomeric chromosomal regions.
ISSN: 1471-2164

inserm-00849779
http://www.hal.inserm.fr/inserm-00849779
http://www.hal.inserm.fr/inserm-00849779/document
http://www.hal.inserm.fr/inserm-00849779/file/1471-2164-14-493.pdf
DOI : 10.1186/1471-2164-14-493

Éditeur(s) : PNRM : Parc Naturel Régional de la Martinique DEAL (Martinique) : Direction de l'Environnement, de l'Aménagement et du Logement Région Martinique PNRM : Parc Naturel Régional de la Martinique
Extrait de : "Biodiversité des espaces forestiers et volcaniques de la Martinique : des spécificités à l'exceptionnalité" : atelier scientifique international, les 12 et 13 octobre 2015. Parc naturel régional de la Martinique
Description : Julien TOUROULT, directeur adjoint SPN-MNHN, analyse les Coléoptères longicornes dans les Petites Antilles puis à l'échelle de la Martinique. Il met en évidence la richesse et l'endémisme de groupe d'insectes dans l'arc des Petites Antilles puis il présente l'état des connaissances en Martinique et les prospections en matière de Hotspots.
Siècle(s) traité(s) : 21
Droits : CC-BY-NC-ND - Attribution - Pas d'utilisation commerciale - Pas de modification
Permalien : http://www.manioc.org/fichiers/V15431
V15431
V15431

Éditeur(s) : HAL CCSD Springer-Verlag
Résumé : We provide evidence for a plume-like upwelling beneath the Eifel hotspot, Western Germany, by using teleseismic shear-wave splitting to resolve the anisotropy associated with upwelling flow that is spreading laterally into the asthenosphere. The variation in fast-polarization azimuth we find across the Eifel hotspot is explained by a model of slowly upwelling material that is horizontally being deflected or sheared in a parabolic asthenospheric flow (PAF) pattern toward west-southwest, a direction that correlates with Eurasian absolute plate motion. We suggest that the lack of an age progression for Eifel volcanism, which is expected for a fixed-upwelling model, is a result of (1) sporadic volcanism due to a low excess plume temperature and/or varying crustal stresses that periodically relax and facilitate eruption, and (2) complex upwelling flow pathways and/or Late Tertiary changes in the slow Eurasian plate motion. The success of the PAF model in fitting the data is remarkable given the small number of parameters (four) and the consistency with the plate motion direction determined from geology and/or geodesy. This suggests that a predictable mantle-anisotropy pattern may exist also for other hotspots driven by plume-like upwellings, and that splitting can be a useful diagnostic to differentiate between plume-like and alternative sources for mantle hotspots.
Mantle plumes - a multidisciplinary approach

hal-00407986
https://hal.archives-ouvertes.fr/hal-00407986
DOI : 10.1007/978-3-540-68046-8

Éditeur(s) : HAL CCSD Wiley
Résumé : International audience
Coral bleaching events threaten coral reef habitats globally and cause severe declines of local biodiversity and productivity.Related to high sea surface temperatures (SST), bleaching events are expected to increase as a consequenceof future global warming. However, response to climate change is still uncertain as future low-latitude climatic conditionshave no present-day analogue. Sea surface temperatures during the Eocene epoch were warmer than forecastedchanges for the coming century, and distributions of corals during the Eocene may help to inform models forecastingthe future of coral reefs. We coupled contemporary and Eocene coral occurrences with information on their respectiveclimatic conditions to model the thermal niche of coral reefs and its potential response to projected climate change.We found that under the RCP8.5 climate change scenario, the global suitability for coral reefs may increase up to 16%by 2100, mostly due to improved suitability of higher latitudes. In contrast, in its current range, coral reef suitabilitymay decrease up to 46% by 2100. Reduction in thermal suitability will be most severe in biodiversity hotspots, especiallyin the Indo-Australian Archipelago. Our results suggest that many contemporary hotspots for coral reefs,including those that have been refugia in the past, spatially mismatch with future suitable areas for coral reefs posingchallenges to conservation actions under climate change.
ISSN: 1354-1013

hal-01145464
https://hal.archives-ouvertes.fr/hal-01145464
DOI : 10.1111/gcb.12868

Éditeur(s) : The Oceanography Society
Résumé : Submarine hydrocarbon seeps are geologically driven "hotspots" of increased biological activity on the seabed. As part of the HERMES project, several sites of natural hydrocarbon seepage in the European seas were investigated in detail, including mud volcanoes and pockmarks, in study areas extending from the Nordic margin, to the Gulf of Cadiz, to the Mediterranean and Black seas. High-resolution seabed maps and the main properties of key seep sites are presented here. Individual seeps show ecosystem zonation related to the strength of the methane flux and distinct biogeochemical processes in surface sediments. A feature common to many seeps is the formation of authigenic carbonate constructions. These constructions exhibit various morphologies ranging from large pavements and fragmented slabs to chimneys and mushroom-shaped mounds, and they form hard substrates colonized by fixed fauna. Gas hydrate dissociation could contribute to sustain seep chemosynthetic communities over several thousand years following large gas-release events.
Oceanography (1042-8275) (The Oceanography Society), 2009-03 , Vol. 22 , N. 1 , P. 92-109

Droits : 2009 by The Oceanography Society. All rights reserved. Permission is granted to copy this article for use in teaching and research. Republication, systemmatic reproduction, or collective redistirbution of any portion of this article by photocopy machine, reposting, or other means is permitted only with the approval of The Oceanography Society. Send all correspondence to: info@tos.org or The Oceanography Society, PO Box 1931, Rockville, MD 20849-1931, USA.
http://archimer.ifremer.fr/doc/2009/publication-6387.pdf
DOI:10.5670/oceanog.2009.11
http://archimer.ifremer.fr/doc/00000/6387/

Éditeur(s) : HAL CCSD Nature Publishing Group
Résumé : International audience
Genetic recombination occurs during meiosis, the key developmental programme of gametogenesis. Recombination in mammals has been recently linked to the activity of a histone H3 methyltransferase, PR domain containing 9 (PRDM9), the product of the only known speciation-associated gene in mammals. PRDM9 is thought to determine the preferred recombination sites--recombination hotspots--through sequence-specific binding of its highly polymorphic multi-Zn-finger domain. Nevertheless, Prdm9 knockout mice are proficient at initiating recombination. Here we map and analyse the genome-wide distribution of recombination initiation sites in Prdm9 knockout mice and in two mouse strains with different Prdm9 alleles and their F(1) hybrid. We show that PRDM9 determines the positions of practically all hotspots in the mouse genome, with the exception of the pseudo-autosomal region (PAR)--the only area of the genome that undergoes recombination in 100% of cells. Surprisingly, hotspots are still observed in Prdm9 knockout mice, and as in wild type, these hotspots are found at H3 lysine 4 (H3K4) trimethylation marks. However, in the absence of PRDM9, most recombination is initiated at promoters and at other sites of PRDM9-independent H3K4 trimethylation. Such sites are rarely targeted in wild-type mice, indicating an unexpected role of the PRDM9 protein in sequestering the recombination machinery away from gene-promoter regions and other functional genomic elements.
ISSN: 0028-0836

hal-00877666
https://hal.archives-ouvertes.fr/hal-00877666
DOI : 10.1038/nature11089
PUBMED : 22660327

Éditeur(s) : HAL CCSD American Geophysical Union
Résumé : International audience
The three-dimensional S-wave velocity structure beneath the South Pacific Superswell is obtained from joint broadband seismic experiments on the ocean floor and islands. We collected only approximately 800 relative times of long-period teleseismic SH-waves by using a waveform cross-correlation from 76 events occurring from January 2003 to May 2005. We conducted relative time tomography to obtain a 3D structure to depths of 1600 km. In the resultant image, we find a characteristic distribution of low- velocity regions. The most prominent features are a large doughnut-shaped low-velocity region at 800 km depth, and an elongated large low-velocity region beneath the Society to Pitcairn hotspots at 1200 km depth. Our model suggests that a large low shear velocity province rooted in the D00 extends upwards and culminates near the top of the lower mantle beneath the central part of the South Pacific Superswell although its perfect continuity is not still confirmed.
ISSN: 0094-8276

hal-01389114
http://hal.univ-reunion.fr/hal-01389114
http://hal.univ-reunion.fr/hal-01389114/document
http://hal.univ-reunion.fr/hal-01389114/file/Tanaka_PLUME_lower_mantle_GRL2009.pdf
DOI : 10.1029/2009GL037568

Éditeur(s) : HAL CCSD BioMed Central
Résumé : International audience
ABSTRACT: BACKGROUND: Climate change poses unprecedented challenges, ranging from global and local policy challenges to personal and social action. Heat-related deaths are largely preventable, but interventions for the most vulnerable populations need improvement. Therefore, the prior identification of high risk areas at the community level is required to better inform planning and prevention. We aimed to demonstrate a simple and flexible conceptual framework relying upon satellite thermal data and other digital data with the goal of easily reproducing this framework in a variety of urban configurations. RESULTS: The study area encompasses Rennes, a medium-sized French city. A Landsat ETM + image (60 m resolution) acquired during a localized heatwave (June 2001) was used to estimate land surface temperature (LST) and derive a hazard index. A land-use regression model was performed to predict the LST. Vulnerability was assessed through census data describing four dimensions (socio-economic status, extreme age, population density and building obsolescence). Then, hazard and vulnerability indices were combined to deliver a heatwave health risk index. The LST patterns were quite heterogeneous, reflecting the land cover mosaic inside the city boundary, with hotspots of elevated temperature mainly observed in the city center. A spatial error regression model was highly predictive of the spatial variation in the LST (R2 = 0.87) and was parsimonious. Three land cover descriptors (NDVI, vegetation and water fractions) were negatively linked with the LST. A sensitivity analysis (based on an image acquired on July 2000) yielded similar results. Southern areas exhibited the most vulnerability, although some pockets of higher vulnerability were observed northeast and west of the city. The heatwave health risk map showed evidence of infra-city spatial clustering, with the highest risks observed in a north--south central band. Another sensitivity analysis gave a very high correlation between 2000 and 2001 risk indices (r = 0.98, p < 10-12). CONCLUSIONS: Building on previous work, we developed a reproducible method that can provide guidance for local planners in developing more efficient climate impact adaptations. We recommend, however, using the health risk index together with hazard and vulnerability indices to implement tailored programs because exposure to heat and vulnerability do not require the same prevention strategies.
ISSN: 1476-072X

inserm-00762303
http://www.hal.inserm.fr/inserm-00762303
http://www.hal.inserm.fr/inserm-00762303/document
http://www.hal.inserm.fr/inserm-00762303/file/1476-072X-11-38.pdf
DOI : 10.1186/1476-072X-11-38

Résumé : The MEDECO Leg 2 cruise followed the MEDECO Leg 1 cruise that had crossed the Mediterranean Sea from the west to the east to study benthic communities of the Var canyon, deep corals found on the Calabrian Margin and cold seep ecosystems of the Mediterranean Ridge. The main objective of the MEDECO Leg 2 cruise was to study and compare, using a multidisciplinary approach, the structure and dynamics of deep-sea ecosystems at various active cold seep sites from the Nile deep sea fan and the Calabrian Arc, in the Eastern Mediterranean sea. During MEDECO Legs 1 & 2, a multiscale strategy was promoted to integrate (1) a high resolution cartography of geological structures (km2 scale), (2) a detailed mapping, including video imagery, of smaller-scale areas (scale 100 to 300 m2), (3) the physical, chemical and sedimentary characteristics of the habitat (multiscale), (4) the structure and functioning of faunal communities, including microbes, in terms of composition, diversity and biomass (multiscale), (5) small scale studies of interactions between organisms and their environment (scale < m2), (6) detailed ecophysiological studies at the organism scale on invertebrates. The use of the ROV “Victor 6000” and of various equipments for in situ and ex situ observations and measurements has helped reaching our objectives. The MEDECO cruise represented the key-Mediterranean cruise of the HERMES project “Hotspot Ecosystem Research on the Margins of European Seas” (P.I. P. Weaver, NOC-Southampton). The cruise was organized to follow the objectives of the HERMES program to better understand the functioning of deep ecosystems of the continental margins aiming at obtaining: (1) the description and quantification of the natural drivers (geological, hydrological, chemical factors) that control the distribution of ecosystems on margins; (2) the characterization and quantification of biodiversity, from bacteria to megafauna, as well as the knowledge of ecosystem functioning; (3) the study of ecosystems dynamics including the biology/physiology of key-species. Specific objectives. Colonization experiments conducted in the frame of two European programs, Diwoo and Chemeco, have given the opportunity to recover the fauna installed in the devices deployed during the Bionil cruise (2006) and to deploy new ones at the same site located in the pockmark area of the central province of Nile deep sea fan.

Droits : 2008 Insu, Cnrs, Locean
http://archimer.ifremer.fr/doc/00134/24550/22583.pdf
http://archimer.ifremer.fr/doc/00134/24550/

Éditeur(s) : HAL CCSD American Association for the Advancement of Science
Résumé : International audience
DNA double-strand breaks (DSBs) are introduced in meiosis to initiate recombination and generate crossovers, the reciprocal exchanges of genetic material between parental chromosomes. Here, we present high-resolution maps of meiotic DSBs in individual human genomes. Comparing DSB maps between individuals shows that along with DNA binding by PRDM9, additional factors may dictate the efficiency of DSB formation. We find evidence for both GC-biased gene conversion and mutagenesis around meiotic DSB hotspots, while frequent colocalization of DSB hotspots with chromosome rearrangement breakpoints implicates the aberrant repair of meiotic DSBs in genomic disorders. Furthermore, our data indicate that DSB frequency is a major determinant of crossover rate. These maps provide new insights into the regulation of meiotic recombination and the impact of meiotic recombination on genome function.
ISSN: 0036-8075

hal-01123717
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01123717
PUBMED : 25395542
DOI : 10.1126/science.1256442

Éditeur(s) : HAL CCSD American Geophysical Union
Résumé : International audience
Upper mantle structures and flow related to the South Pacific Superswell and to the associated short-lived hotspots are investigated using seismic stations deployed in French Polynesia. Beside island stations, broadband ocean bottom seismometers ( BBOBS) have been deployed between the various Polynesian archipelagos to investigate the oceanic upper mantle "unperturbed'' by thickened crust or hotspot activity. We investigate seismic anisotropy measured at BBOBS stations and found it rather similar to that from island stations. This confirms the ability of OBS to be used for anisotropy purposes and suggests some homogeneity in the upper mantle pervasive deformation. The two OBS installed on the head of the Society hotspot provide different anisotropy signatures than most of the other French Polynesian stations: one is "isotropic'' to SKS waves and the other provides a fast split direction normal to the average value observed in this area, suggesting a more complex mantle flow induced by the plume upwelling.
ISSN: 0094-8276

hal-00420907
https://hal.archives-ouvertes.fr/hal-00420907
https://hal.archives-ouvertes.fr/hal-00420907/document
https://hal.archives-ouvertes.fr/hal-00420907/file/Barruol_SKS_PLUME_BBOBS_GRL2009.pdf
DOI : 10.1029/2009GL038139

Éditeur(s) : HAL CCSD Magnolia Press
Résumé : International audience
Despite their importance in marine biodiversity, invertebrates are far less studied than vertebrates. Given the current globalbiodiversity crisis and insufficient taxonomic resources, sustained efforts need to be undertaken to assess species diversity,especially in the highly threatened ‘biodiversity hotspots’. Réunion is a young volcanic island lying in the Mascarene Islands(south-western Indian Ocean, SWIO), a marine biodiversity hotspot. A substantial sampling effort was conductedaround Réunion Island to document shallow water reef-associated ophiuroid (brittle-stars) diversity, a class recognised asthe most diverse among echinoderms. A total of 33 species were documented, increasing the known species richness ofthe island by 56%. Findings include 15 new records for Réunion, 11 for the Mascarene Islands and 8 for the Indian Ocean.The most diverse family was Ophiocomidae, a family of large, abundant and conspicuous tropical species. Even in thiswell studied family, a new species was revealed by this survey. Morphological variants together with DNA sequence variationswithin several species revealed cryptic species. We compared our results with the known fauna of other MascareneIslands and discuss biogeographic implications for the region.
ISSN: 1175-5326

hal-01327053
https://hal-univ-perp.archives-ouvertes.fr/hal-01327053
DOI : 10.11646/zootaxa.4098.2.4

Éditeur(s) : HAL CCSD
Résumé : Tropical forests are a biodiversity hotspot, with the coexistence of numerous species until a fine spatial scale. Particularly, 16.000 tree species coexist in Amazonia, 1.800 in Frenche Guiana and between 120 and more than 200 tree species per hectare. However, there are some uncertainties in maintaining diversity in regard to global changes. Hence before predicting the diversity evolution face of global changes, fundamental studies are needed to understand which assembly processes are involved in the maintenance of diversity. These fundamental studies still relevant given the lack of consensus on the relative importance of assembly processes. This thesis is a continuation of these fundamental studies, using innovative integrative approach, at multi-scale, to address three types of diversity: taxonomic diversity, functional and phylogenetic. Our results challenge the importance of environmental filtering for hydrological and chemical properties of soils, versus the importance of biotic interactions on community assembly. Furthermore, our results suggest that species distributions could be affected by forest dynamics related to falling trees and therefore by light availability. Finally, we have highlighted the importance of dispersal limitation on community assembly.
Les forêts tropicales représentent un ‘hotspot’ de diversité avec un nombre considérable d’espèces qui coexistent jusqu’à une échelle locale fine. Plus particulièrement, 16 000 espèces d’arbres coexistent en Amazonie, 1 800 en Guyane française et entre 120 et plus de 200 espèces d’arbres par hectare. Cependant, le maintien de cette diversité face aux changements globaux actuels et à venir (qu’ils soient anthropiques ou climatiques…) est incertain. Avant de pouvoir prédire l’évolution de la diversité face aux changements globaux, un travail fondamental est nécessaire afin de comprendre les processus d’assemblage des communautés, processus qui maintiennent cette diversité. Ce travail est réalisé depuis de nombreuses années en écologie et reste d’actualité vu l’absence de consensus quant à l’importance relative des processus d’assemblage. Cette thèse s’inscrit dans la continuité de ce travail fondamental en utilisant une approche intégrative innovante, qui aborde de manière multi-échelle trois types de diversité : diversité taxonomique, fonctionnelle et phylogénétique. Nos résultats questionnent sur l'importance du filtrage environnemental quant aux propriétés hydrologiques et chimiques des sols, et sur celle des interactions biotiques dans l’assemblage de la communauté étudiée. Par ailleurs, nos résultats suggèrent que les distributions d’espèces puissent être influencées par la dynamique forestière en lien avec les chutes d’arbres et donc avec la disponibilité en lumière. Enfin, nous avons mis en évidence l’importance de la limitation de dispersion.
https://tel.archives-ouvertes.fr/tel-01418447

NNT : 2016YANE0003
tel-01418447
https://tel.archives-ouvertes.fr/tel-01418447
https://tel.archives-ouvertes.fr/tel-01418447/document
https://tel.archives-ouvertes.fr/tel-01418447/file/these.pdf

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Three-dimensional P-wave velocity structure of the mantle beneath the South Pacific Superswell is determined through passive broadband seismic experiments on the ocean floor and islands between 2003 and 2005. We collected approximately 1500 relative times of long-period teleseismic P-waves by using a waveform cross-correlation. We analyzed this data set with relative time tomography to depths of 2000 km. The resultant structure shows lateral heterogeneity of approximately +/- 2%, in which a distinct low velocity region is found beneath the center of the Superswell at a depth of 1600 km. At 1200km depth, an elongated low velocity region is found beneath the Society to Pitcairn hotspots. At 800 km depth, two linear low velocity regions are located beneath Tuamotu and Austral islands. Isolated low velocity regions are identified beneath the Society, Marquesas, and Macdonald hotspots at 400 km depth. Our new tomographic images reveal that the large low velocity region rooted in the deep lower mantle is split into two sheets at 1200 km depth and these terminate at approximately 800 km depth. This feature appears to be consistent with the characteristics of a thermo-chemical pile or dome.
ISSN: 0031-9201

hal-00413036
https://hal.archives-ouvertes.fr/hal-00413036
https://hal.archives-ouvertes.fr/hal-00413036/document
https://hal.archives-ouvertes.fr/hal-00413036/file/Tanaka_tomo_PLUME_PEPI2009_hal.pdf
DOI : 10.1016/j.pepi.2008.10.016

Éditeur(s) : HAL CCSD Oxford University Press (OUP)
Résumé : International audience
Upper mantle anisotropy beneath the African IRIS and Geoscope stations is investigated through the measurements of splitting of teleseismic shear waves such as SKS, SKKS and PKS phases. Seismic anisotropy data are interesting on their own as a measure of upper mantle active or frozen deformation beneath a given station, but each station is of potential interest since it can be used to retrieve source-side seismic anisotropy at remote sites if one is able to perform station-side anisotropy correction. We performed systematic investigations of teleseismic shear wave splitting at 15 stations from the IRIS and Geoscope global seismic networks, which are located on both the oceanic and the continental parts of the African plate. Anisotropy is generally well observed at continental stations. The patterns we present generally show much more complexity than the results previously published from smaller data sets. Despite this complexity, the splitting parameters generally appear in several places to contain a signature of the regional geodynamic setting (rift structures, Archaean craton, Pan-African belt), although a deeper source of anisotropy (asthenospheric) may be present. At the oceanic stations, anisotropy measurements are much more difficult to perform because the signal is generally of poor quality. MSEY, in the Seychelles (Indian ocean), is the exception and displays a clear correlation of the azimuth of the fast split shear wave with the trend of the absolute plate motion, as defined by hotspot tracks.
ISSN: 0956-540X

hal-01380389
https://hal.archives-ouvertes.fr/hal-01380389
https://hal.archives-ouvertes.fr/hal-01380389/document
https://hal.archives-ouvertes.fr/hal-01380389/file/Barruol_SKS_afric_GJI2001.pdf
DOI : 10.1046/j.0956-540x.2001.01481.x

Éditeur(s) : HAL CCSD Cold Spring Harbor Laboratory Press
Résumé : International audience
Meiotic DNA double-stranded breaks (DSBs) initiate genetic recombination in discrete areas of the genome called recombination hotspots. DSBs can be directly mapped using chromatin immunoprecipitation followed by sequencing (ChIP-seq). Nevertheless, the genome-wide mapping of recombination hotspots in mammals is still a challenge due to the low frequency of recombination, high heterogeneity of the germ cell population, and the relatively low efficiency of ChIP. To overcome these limitations we have developed a novel method--single-stranded DNA (ssDNA) sequencing (SSDS)--that specifically detects protein-bound single-stranded DNA at DSB ends. SSDS comprises a computational framework for the specific detection of ssDNA-derived reads in a sequencing library and a new library preparation procedure for the enrichment of fragments originating from ssDNA. The use of our technique reduces the nonspecific double-stranded DNA (dsDNA) background >10-fold. Our method can be extended to other systems where the identification of ssDNA or DSBs is desired.
ISSN: 1088-9051

hal-00877675
https://hal.archives-ouvertes.fr/hal-00877675
DOI : 10.1101/gr.130583.111
PUBMED : 22367190

Éditeur(s) : Pergamon-elsevier Science Ltd
Résumé : We report the northernmost and deepest known occurrence of deep-water pycnodontine oysters based on two surveys along the French Atlantic continental margin to the La Chapelle continental slope (2006) and the Guilvinec Canyon (2008) The combined use of multibeam bathymetry seismic profiling CTD casts and a remotely operated vehicle (ROV) made it possible to describe the physical habitat and to assess the oceanographic control for the recently described species Neopycnodonte zibrowii These oysters have been observed in vivo in depths from 540 to 846 m colonizing overhanging banks or escarpments protruding from steep canyon flanks Especially in the Bay of Biscay such physical habitats may only be observed within canyons where they are created by both long-term turbiditic and contouritic processes Frequent observations of sand ripples on the seabed indicate the presence of a steady but enhanced bottom current of about 40 cm/s The occurrence of oysters also coincides with the Interface between the Eastern North Atlantic Water and the Mediterranean Outflow Water A combination of this water mass mixing internal tide generation and a strong primary surface productivity may generate an enhanced nutrient flux which is funnelled through the canyon When the ideal environmental conditions are met up to 100 individuals per m(2) may be observed These deep-water oysters require a vertical habitat which is often incompatible with the requirements of other sessile organisms and are only sparsely distributed along the continental margins The discovery of these giant oyster banks illustrates the rich biodiversity of deep-sea canyons and their underestimation as true ecosystem hotspots (C) 2010 Elsevier Ltd All rights reserved
Deep-sea Research Part I-oceanographic Research Papers (0967-0637) (Pergamon-elsevier Science Ltd), 2010-12 , Vol. 57 , N. 12 , P. 1561-1572

Droits : 2010 Elsevier Ltd All rights reserved.
http://archimer.ifremer.fr/doc/00023/13419/14034.pdf
DOI:10.1016/j.dsr.2010.09.002
http://archimer.ifremer.fr/doc/00023/13419/

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Evidence of anomalous volcanism is readily observed in the Gulf of Aden, although, much of this oceanic basin remains as yet unmapped. In this paper, we investigate the possible connection of the Afar hotspot with a major off-axis volcanic structure and its interpretation as a consequence of a the anomalous presence of melt by integrating several data sets, both published and unpublished, from the Encens-Sheba cruise, the Aden New Century (ANC) cruise and several other onshore and marine surveys. These include bathymetric, gravity, magnetic, magneto-telluric data, and rock samples. Based upon these observations, interpretations were made of seafloor morphology, gravity and magnetic models, seafloor age, geochemical analyses and tectonic setting. We discuss the possible existence of a regional melting anomaly in the Gulf of Aden area and of the probability of its connection to the Afar plume. Several models that might explain the anomalous volcanism are taken into account, such as a local melting anomaly unrelated to the Afar plume, an anomalously large volume of melt associated with seafloor spreading, and interaction of the ridge with the Afar plume. A local melting anomaly and atypical seafloor spreading prove inconsistent with our observations. Two previously proposed models of plume-ridge interactions are examined: the diffuse plume dispersion called pancaked flow and channelized along-axis flow. We conclude that the configuration and structure of this young ocean basin may have the effect of channeling material away from the Afar plume along the Aden and Sheba Ridges to produce the off-axis volcanism observed on the ridge flanks. This interpretation implies that the influence of the Afar hotspot may extend much farther eastwards into the Gulf of Aden than previously believed. The segmentation of the Gulf of Aden and the configuration of the Aden-Sheba system may provide a potential opportunity to study channeled flow of solid plume mantle from the plume along a segmented ridge and nearby continental margins.
ISSN: 0012-821X

hal-00486140
https://hal.archives-ouvertes.fr/hal-00486140
DOI : 10.1016/j.epsl.2010.02.036