Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
In order to perform a human and ecological risk assessment of pharmaceutical products (PPs) in natural waters, it is necessary to accurately quantify a broad variety of PPs at low concentrations. Although numerous currently implemented analytical methodologies, less is known about the preservation of PPs in natural water samples within the period before analysis (holding time, storage conditions). This paper is the first literature review about the stability of PPs in natural waters (surface and groundwaters) during sample storage. The current work focuses on a comparison of the performances of the available preservation techniques (filtration, container materials, storage temperature, preservative agents, etc.) for PPs in samples. All 58 reviewed PPs may be successfully stabilized during 7 days in surface waters by at least one appropriate methodology regarding temperature, acidic and non-acidic preservatives. When temperature is not a sufficient preservation parameter f! or some PPs (hormones and fluoxetine) its combination with the addition of chemical agents into the samples may prolong the integrity of the PPs during storage in surface water. There is a strong need to use standard protocols to assess and compare the stability of PPs in environmental water matrices during storage as well as during analytical preparation or analysis (European criteria 2002/657/EC). Since the stability of PPs during sample storage is a critical parameter that could call into question the quality of the data provided for the concentrations, the design of stability studies should rigorously take into account all critical parameters that could impact the concentrations of the PPs with time.
Talanta

insu-00839186
https://hal-insu.archives-ouvertes.fr/insu-00839186
DOI : 10.1016/j.talanta.2013.01.042

Éditeur(s) : HAL CCSD
Résumé : Publié en septembre 2013 dans le "Journal de Gynécologie Obstétrique et Biologie de la Reproduction" vol.42 n°5 p.413-444
We review the epidemiological literature on the possible impact of chemical and physical factors on pregnancy outcome. Effects of in-utero exposures on child health are not considered here. The highest levels of evidence concern the effects of passive smoking (on fetal growth), of lead (pregnancy-induced hypertension, fetal growth), of some Polychlorinated Biphenyls (PCB; on fetal growth) and, to a lesser extent, of atmospheric pollutants (on fetal growth and preterm delivery). For the other compounds, in particular non-persistent chemicals, the literature, which is generally based on poor exposure assessment, is less informative. In conclusion, the last decades have witnessed the development of mother-child cohorts in which exposure biomarkers have been assayed, allowing a large number of publications. For some persistent compounds, for which efficient exposure assessment approaches have been used, the literature indicates a likely impact on pregnancy outcomes. With the exception of air pollutants, the literature on non-persistent compounds is little conclusive; the assay of exposure biomarkers in repeated biological samples collected at relevant time points could help further increase knowledge regarding any health impact.
https://hal.archives-ouvertes.fr/hal-00916684

hal-00916684
https://hal.archives-ouvertes.fr/hal-00916684
https://hal.archives-ouvertes.fr/hal-00916684/document
DOI : 10.1016/j.jgyn.2013.02.012

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Transport of liquid and gaseous hydrocarbons through focused fluid flow systems is a widespread process in continental margins and sedimentary basins, which is gaining increased attention in the assessment of geohazards, environment conservation, and securing fossil energy resources. Studying the abundance, distribution and drivers for this process is crucial for understanding its role in 1) the dynamics of gas hydrate accumulation and destabilization, 2) submarine slope stability and related tsunamis, 3) the plethora of chemosynthetic benthic ecosystems that develop in deep seep sites, and 4) the input of greenhouse gases (e.g. methane) into the ocean/atmosphere system, which may influence the atmospheric carbon budget and Earth's paleo- and present climate. New ocean exploration tools provide ever more data and improve our understanding of these systems. However, the subject still suffers from a lack of interdisciplinary knowledge dissemination. The ongoing international debate about the timing and the processes that control fluid expulsion in sedimentary basins is fuelled by their implications for structural and petroleum geology. Because fluids expelled at cold seeps originate at depth they represent open windows into the underlying petroleum systems and are valuable indicators for the reservoir systems. They may also help in deciphering past and predicting future climate change because worldwide release of large amounts of fluids may have an impact on the chemistry of the ocean and atmosphere.
ISSN: 0025-3227

hal-00772472
https://hal.archives-ouvertes.fr/hal-00772472
DOI : 10.1016/j.margeo.2012.10.012

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
In a period of agricultural decline in the uplands of Europe, agriculture is ceasing to provide the primary rationale for the organisation, utilisation and functioning of rural space. Policy reform, market trends and changes to the way citizens and consumers think about the countryside all suggest a need for thinking strategically about the future development of these areas. However, without a broad involvement of stakeholders, land use conflicts, and social and cultural conflicts in general, may increase. Involving stakeholders in upland areas can be facilitated by using scenario technique and by discussing alternative futures in local stakeholder panels. In this paper we present four scenarios of land-use change for the year 2030, and their assessments by stakeholder panels in Scotland, France, Norway, Switzerland, Slovakia and Greece. The aim of the paper is to explore the ways in which stakeholders in these locations advocate and assess these scenarios. We also explore how stakeholders in different countries weight the visual landscape impacts, the livelihood and biodiversity aspects of the scenarios in their assessment, and the reasons for their prioritising. The cross-country analysis shows that stakeholders across the study areas are united in their overall rejection of agricultural liberalisation, advocating a production-oriented, but multifunctional and environmentally-friendly agriculture that maintains landscapes and biodiversity.
ISSN: 0743-0167

halshs-01227527
https://halshs.archives-ouvertes.fr/halshs-01227527
DOI : 10.1016/j.jrurstud.2007.04.001

Éditeur(s) : HAL CCSD Public Library of Science
Résumé : International audience
BACKGROUND:Dengue fever is the most important arboviral infection that affects humans, particularly in tropical and subtropical regions. Here, we provide the first comprehensive overview of the severity of dengue epidemics in French Guiana.METHODOLOGY/PRINCIPAL FINDINGS:We monitored hospitalized cases between 2008 and 2013. Detailed clinical features and biological parameters were collected on a daily basis from all cases. Among the 1,356 cases, 216 (16%) were classified according to the WHO 2009 classification as dengue without warning signs (WS), 926 (68%) were classified as dengue with WS and 214 (16%) were classified as severe dengue. The severity rates were similar between the three major epidemics that occurred during the study period, whereas the hospitalization rate was highest in 2013. Fluid accumulation, aspartate aminotransferase (ASAT) counts>193 IU/L and platelet counts<75,000 cells/mm3 were associated with dengue severity.CONCLUSIONS/SIGNIFICANCE:Our findings provide a recent epidemiological description of the severity of dengue epidemics in French Guiana. These results highlight the potential impacts and consequences of implementing the WHO 2009 classification on hospital activity. Future studies should include virological and immunological investigations of well-documented serum samples
ISSN: 1932-6203

inserm-01481447
http://www.hal.inserm.fr/inserm-01481447
http://www.hal.inserm.fr/inserm-01481447/document
http://www.hal.inserm.fr/inserm-01481447/file/2017%2C%20Flamand%20-%20Epidemiological%20assessment%20of%20the%20severity%20of%20dengue%20epidemics%20in%20French%20Guiana.pdf
DOI : 10.1371/journal.pone.0172267.t003

Éditeur(s) : HAL CCSD MDPI
Résumé : International audience
The issue of drinking water quality compliance in small and medium scale water services is of paramount importance in relation to the 98/83/CE European Drinking Water Directive (DWD). Additionally, concerns are being expressed over the implementation of the DWD with respect to possible impacts on water quality from forecast changes in European climate with global warming and further anticipated reductions in north European acid emissions. Consequently, we have developed a decision support system (DSS) named ARTEM-WQ (AwaReness Tool for the Evaluation and Mitigation of drinking Water Quality issues resulting from environmental changes) to support decision making by small and medium plant operators and other water stakeholders. ARTEM-WQ is based on a sequential risk analysis approach that includes consideration of catchment characteristics, climatic conditions and treatment operations. It provides a holistic evaluation of the water system, while also assessing human health risks of organic contaminants potentially present in treated waters (steroids, pharmaceuticals, pesticides, bisphenol-a, polychlorobiphenyls, polycyclic aromatic hydrocarbons, petrochemical hydrocarbons and disinfection by-products; n = 109). Moreover, the system provides recommendations for improvement while supporting decision making in its widest context. The tool has been tested on various European catchments and shows a promising potential to inform water managers of risks and appropriate mitigative actions. Further improvements should include toxicological knowledge advancement, environmental background pollutant concentrations and the assessment of the impact of distribution systems on water quality variation.
ISSN: 1660-4601

hal-01122233
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01122233
PUBMED : 25046634
DOI : 10.3390/ijerph110707354
PUBMEDCENTRAL : PMC4113881

Éditeur(s) : Université des Antilles Études caribéennes
Résumé : Le présent document a pour objet d’évaluer les implications potentielles sur les économies des états de la Caraïbe et de celles des DFA (Guadeloupe, Martinique, Guyane) du volet commercial de l’accord de partenariat économique (APE) signé en octobre 2008 entre les pays du CARIFORUM et l’Union européenne. Deux modèles ont été utilisés à cet effet : un modèle d’équilibre général calculable (le modèle GTAP), appliqué aux économies du CARIFORUM, et un modèle de gravité appliqué à celles des DFA. Les simulations issues du modèle d’équilibre général calculable montrent que dans l’hypothèse d’une pleine réciprocité (sans droits ou quotas entre les deux partenaires), les résultats dans le cas des pays du CARIFORUM seraient contrastés. Ils seraient positifs pour certains pays et secteurs de production, et modestes pour d’autres. Ils se traduiraient par une baisse sensible des recettes douanières pour la plupart des pays et par une dégradation de la balance commerciale pour les plus vulnérables. Enfin, la croissance et le bien-être des habitants de cette zone subiraient une très légère augmentation (0,04%). Concernant les DFA, les résultats issus de l’application du modèle de gravité révèlent que ces régions ultrapériphériques de l’Europe combinent, en raison de la structure de leur économie, de celle de leurs coûts de production et surtout à cause des liens institutionnels et économiques très étroits qu’elles entretiennent avec la France et donc avec l’Europe un certain nombre de facteurs pénalisants, susceptibles d’entraver le potentiel de commerce qu’elles pourraient développer avec les pays ACP voisins dans le cadre de cet APE.
The present paper seeks to provide an assessment of the likely implications of the CARIFORUM-EU Economic Partnership Agreement (EPA) on economy of Caribbean states and French Caribbean Outermost Regions (FCORs). Two models are used for that a computable general equilibrium model (GTAP model), applied to CARIFORUM countries, and a gravity model framework applied to French Caribbean Outermost Regions. The main findings from application of the computable general equilibrium model can be outlined as follows in case of full reciprocity between the partners in merchandise trade, the results show that impacts are contrasted among the economies. The effects appear positive for some countries, sectors and negative for the others. Tariff reductions will translate into a decline in government revenue and a degradation of their balance of payments. The well-being of CARIFORUM households has improved very lightly (0.04%). On the other hands, the application of the gravity model framework reveals several barriers to regional trade between French Caribbean Outermost Regions and their neighbours, particularly their strong institutional and economic links with continental France, responsible for a high labour cost and a lack of autonomy with regard to international trade. The study also highlights that French language is an obstacle to trade across the Caribbean, due to the fact it is a minority in this region, as well as absence of FCORs in main economic and trade agreements of Caribbean. Finally the paper finds that there is high degree of similarity of exports among the countries and territories in the Caribbean.
Caraïbes

Droits : info:eu-repo/semantics/openAccess
urn:doi:10.4000/etudescaribeennes.6928
http://journals.openedition.org/etudescaribeennes/6928

Éditeur(s) : HAL CCSD Wiley
Résumé : International audience
Due to shallow penetration of millimeter waves (MMW) and convection in liquid medium surrounding cells, the problem of accurate assessment of local MMW heating in in vitro experiments remains unsolved. Conventional dosimetric MMW techniques, such as infrared imaging or fiber optic (FO) sensors, face several inherent limits. Here we propose a methodology for accurate local temperature measurement and subsequent specific absorption rate (SAR) retrieval using microscale thermocouples (TC). SAR was retrieved by fitting the measured initial temperature rise to the numerical solution of an equivalent thermal model. It was found that the accuracy of temperature measurement depends on thermosensor size, that is, the smaller TC, the more accurate the temperature measurement. SAR determined using TC with lead diameters of 25 and 75m demonstrated 98.5% and 80.4% match with computed SAR, respectively. However, both TC provided the same temperature rises in long run (>10min). FO probe failed to measure adequately local heating both for short and long exposures due to the relatively large size of the probe sensor (400m) and time constant (0.6s). Calculated SAR in the cell monolayer was almost two times lower than that in the surrounding liquid. It was shown that the impact of the cell monolayer on heating due to its small thickness (5 to 10m) can be considered as negligible. Moreover, we demonstrated the possibility of accurate measurement of MMW-induced thermal pulses (up to 10 degrees C) using 25m TC. Bioelectromagnetics. 38:11-21, 2017. (c) 2016 Wiley Periodicals, Inc.
ISSN: 0197-8462

hal-01436768
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01436768
DOI : 10.1002/bem.21999
PUBMED : 27571392

Éditeur(s) : HAL CCSD
Résumé : International audience
This study aims at understanding the presence of regulated and emerging micropollutants, particularly pesticides and pharmaceuticals, in surface water, regarding spatial and temporal influences at a watershed scale. The study of relations between micropollutants and other water quality and hydroclimatic parameters was carried out from a statistical analysis on historical and experimental data of different sampling sites from the main watershed of Brittany, western France. The outcomes point out the influence of urban and rural areas of the watershed as well as the impact of seasons on contamination variations. This work contributes to health risk assessment related to surface water contamination by micropollutants. This approach is particularly interesting in the case of agricultural watersheds such as the one studied, where more than 80% of surface water is used to produce drinking water.
International Journal of Environmental Research and Public Health

hal-00878078
https://hal.archives-ouvertes.fr/hal-00878078
https://hal.archives-ouvertes.fr/hal-00878078/document
DOI : 10.3390/ijerph9124433

Éditeur(s) : HAL CCSD National Institute of Environmental Health Sciences
Résumé : International audience
Background: Glycol ethers (GE) are widely used organic solvents. Despite the potential neurotoxicity of several families of organic solvents, little is known about the impact of GE on the neurodevelopment of infants and children. Objectives: We investigated the relation between urinary concentrations of GE metabolites in pregnant women and neurocognitive abilities in their 6-year-old children in the PELAGIE mother-child cohort. Methods: Five GE metabolites were measured in first morning void urine samples of 204 French pregnant women in early pregnancy (<19 weeks of gestation). Psychologists assessed the neurocognitive abilities of their 6-year-old children with the Wechsler Intelligence Scale for Children IV (WISC) and the Developmental Neuropsychological Assessment (NEPSY). We analyzed the results with linear (WISC) and Poisson regression models (NEPSY), adjusted for potential confounders, including child's stimulation at home. Results: GE metabolites were detected in 90-100% of maternal urine samples. The WISC Verbal Comprehension score was significantly lower for children with the highest tertile of urinary phenoxyacetic acid (PhAA) [beta (third vs. first tertile)=-6.53; 95% CI: -11.44, -1.62]. Similarly, the NEPSY Design Copying subtest score was lower in those with the highest tertile of urinary ethoxyacetic acid (EAA) [beta (third vs. first tertile)=-0.11; 95% CI: -0.21, 0.00]. The other GE metabolites we studied were not significantly associated with WISC or NEPSY scores. Conclusions: Prenatal urine concentrations of two GE metabolites were associated with lower WISC Verbal Comprehension Index scores and NEPSY Design Copying subscale scores, respectively, at age 6 years. PhAA is the primary metabolite of 2-phenoxyethanol (EGPhE), which is commonly found in cosmetics, and precursors of EAA are frequently used in cleaning agents. Additional research is needed to confirm our findings and further explore potential effects of prenatal GE exposures on neurocognitive performance in children.
ISSN: 0091-6765

hal-01519256
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01519256
DOI : 10.1289/EHP39
PUBMED : 27740510

Éditeur(s) : HAL CCSD Taylor & Francis
Résumé : International audience
Abstract Indoor fungal contamination has been associated with a wide range of adverse health effects, including infectious diseases, toxic effects and allergies. The diversity of fungi contributes to the complex role that they play in indoor environments and human diseases. Molds have a major impact on public health, and can cause different consequences in hospitals, homes and workplaces. This review presents the methods used to assess fungal contamination in these various environments, and discusses advantages and disadvantages for each method in consideration with different health risks. Air, dust and surface sampling strategies are compared, as well as the limits of various methods are used to detect and quantify fungal particles and fungal compounds. In addition to conventional microscopic and culture approaches, more recent chemical, immunoassay and polymerase chain reaction (PCR)-based methods are described. This article also identifies common needs for future multidisciplinary research and development projects in this field, with specific interests on viable fungi and fungal fragment detections. The determination of fungal load and the detection of species in environmental samples greatly depend on the strategy of sampling and analysis. Quantitative PCR was found useful to identify associations between specific fungi and common diseases. The next-generation sequencing methods may afford new perspectives in this area.
ISSN: 1040-841X

hal-00874670
https://hal.archives-ouvertes.fr/hal-00874670
DOI : 10.3109/1040841X.2013.777687
PUBMED : 23586944

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
As climate change continues to impact socio-ecological systems, tools that assist conservation managers to understand vulnerability and target adaptations are essential. Quantitative assessments of vulnerability are rare because available frameworks are complex and lack guidance for dealing with data limitations and integrating across scales and disciplines. This paper describes a semi-quantitative method for assessing vulnerability to climate change that integrates socio-ecological factors to address management objectives and support decision-making. The method applies a framework first adopted by the Intergovernmental Panel on Climate Change and uses a structured 10-step process. The scores for each framework element are normalized and multiplied to produce a vulnerability score and then the assessed components are ranked from high to low vulnerability. Sensitivity analyses determine which indicators most influence the analysis and the resultant decision-making process so data quality for these indicators can be reviewed to increase robustness. Prioritisation of components for conservation considers other economic, social and cultural values with vulnerability rankings to target actions that reduce vulnerability to climate change by decreasing exposure or sensitivity and/or increasing adaptive capacity. This framework provides practical decision-support and has been applied to marine ecosystems and fisheries, with two case applications provided as examples: (1) food security in Pacific Island nations under climate-driven fish declines, and (2) fisheries in the Gulf of Carpentaria, northern Australia. The step-wise process outlined here is broadly applicable and can be undertaken with minimal resources using existing data, thereby having great potential to inform adaptive natural resource management in diverse locations.
ISSN: 0308-597X

hal-01380403
https://hal-univ-perp.archives-ouvertes.fr/hal-01380403
DOI : 10.1016/j.marpol.2016.09.024

Éditeur(s) : Public Library Science
Résumé : Where conservation resources are limited and conservation targets are diverse, robust yet flexible priority-setting frameworks are vital. Priority-setting is especially important for geographically widespread species with distinct populations subject to multiple threats that operate on different spatial and temporal scales. Marine turtles are widely distributed and exhibit intra-specific variations in population sizes and trends, as well as reproduction and morphology. However, current global extinction risk assessment frameworks do not assess conservation status of spatially and biologically distinct marine turtle Regional Management Units (RMUs), and thus do not capture variations in population trends, impacts of threats, or necessary conservation actions across individual populations. To address this issue, we developed a new assessment framework that allowed us to evaluate, compare and organize marine turtle RMUs according to status and threats criteria. Because conservation priorities can vary widely (i.e. from avoiding imminent extinction to maintaining long-term monitoring efforts) we developed a "conservation priorities portfolio" system using categories of paired risk and threats scores for all RMUs (n = 58). We performed these assessments and rankings globally, by species, by ocean basin, and by recognized geopolitical bodies to identify patterns in risk, threats, and data gaps at different scales. This process resulted in characterization of risk and threats to all marine turtle RMUs, including identification of the world's 11 most endangered marine turtle RMUs based on highest risk and threats scores. This system also highlighted important gaps in available information that is crucial for accurate conservation assessments. Overall, this priority-setting framework can provide guidance for research and conservation priorities at multiple relevant scales, and should serve as a model for conservation status assessments and priority-setting for widespread, long-lived taxa.
Plos One (1932-6203) (Public Library Science), 2011-09 , Vol. 6 , N. 9 , P. 1-14

Droits : 2011 Wallace et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License
http://archimer.ifremer.fr/doc/00050/16097/13573.pdf
DOI:10.1371/journal.pone.0024510
http://archimer.ifremer.fr/doc/00050/16097/

Éditeur(s) : HAL CCSD Nature Publishing Group
Résumé : International audience
Everyone is subject to environmental exposures from various sources, with negative health impacts (air, water and soil contamination, noise, etc.or with positive effects (e.g. green space). Studies considering such complex environmental settings in a global manner are rare. We propose to use statistical factor and cluster analyses to create a composite exposure index with a data-driven approach, in view to assess the environmental burden experienced by populations. We illustrate this approach in a large French metropolitan area. The study was carried out in the Great Lyon area (France, 1.2 M inhabitants) at the census Block Group (BG) scale. We used as environmental indicators ambient air NO2 annual concentrations, noise levels and proximity to green spaces, to industrial plants, to polluted sites and to road traffic. They were synthesized using Multiple Factor Analysis (MFA), a data-driven technique without a priori modeling, followed by a Hierarchical Clustering to create BG classes. The first components of the MFA explained, respectively, 30, 14, 11 and 9% of the total variance. Clustering in five classes group: (1) a particular type of large BGs without population; (2) BGs of green residential areas, with less negative exposures than average; (3) BGs of residential areas near midtown; (4) BGs close to industries; and (5) midtown urban BGs, with higher negative exposures than average and less green spaces. Other numbers of classes were tested in order to assess a variety of clustering. We present an approach using statistical factor and cluster analyses techniques, which seem overlooked to assess cumulative exposure in complex environmental settings. Although it cannot be applied directly for risk or health effect assessment, the resulting index can help to identify hot spots of cumulative exposure, to prioritize urban policies or to compare the environmental burden across study areas in an epidemiological framework.Journal of Exposure Science and Environmental Epidemiology advance online publication, 24 September 2014; doi:10.1038/jes.2014.66.
ISSN: 1559-0631

hal-01069587
https://hal.archives-ouvertes.fr/hal-01069587
https://hal.archives-ouvertes.fr/hal-01069587/document
https://hal.archives-ouvertes.fr/hal-01069587/file/Article_multiexpo_20140708_c.pdf
DOI : 10.1038/jes.2014.66

Éditeur(s) : HAL CCSD BioMed Central
Résumé : International audience
Background: Ovarian failure (OF) is considered premature if it occurs before the age of 40. This study investigates the genetic aetiology underlying OF in women under the age of 40 years. Methods: We conducted an experimental prospective study performing all genome microarrays in 60 patients younger than 40 years presenting an OF revealed by a decrease of circulating Anti-Mullerian Hormone (AMH) and leading to an oocyte donation program. Results: We identified nine significant copy number variations (CNVs) including candidate genes potentially implicated in reproductive function. These genes are principally involved in cell division and chromosome segregation (SYCE1, CLASP1, CENP-A, CDC16), in ciliary development and/or function (RSPH1, KIF24), are linked with known gonadal genes or expressed in female genital tract (CSMD1, SEMA6D, KIAA1324). Conclusions: Our data strengthen the idea that microarrays should be used in combination with karyotype for aetiological assessment of patients with OF. This analysis may have a therapeutic impact as the identification of new molecular actors for gonadal development or ovarian physiology is useful for the prediction of an ovarian reserve decline and makes possible preventive fertility preservation.
ISSN: 1757-2215

hal-01390979
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01390979
DOI : 10.1186/s13048-016-0272-5
PUBMED : 27716277

Éditeur(s) : ICES 2008 Annual Science Conference, 22-26 september 2008, HALIFAX, CANADA
Résumé : Since 2000, Ifremer has been implemented a Fisheries Information System (FIS), in strong collaboration with the DPMA (Direction of fisheries and aquaculture of the French Ministry of Agriculture and Fisheries). The FIS aims at building an operational and multidisciplinary monitoring network for scientific purposes, allowing a comprehensive view of fishery systems including their biological, technical, environmental and economical components. The objectives of the FIS are (i) to provide the specifications and methodologies for the collection, storage and processing of fisheries data, with the constant concern to harmonise all these procedures on a national scale, (ii) to improve data management system and access to data for a wide-spread public, and (iii) to produce and distribute relevant datasets, indicators and synthesis, for understanding and evaluation, including bio-economic diagnostics of the fisheries, and assessment of the short and long-term impacts of fisheries management scenario and measures. The FIS covers all the French fisheries, including overseas territories and small-scale fisheries, for which data are often hardly available or missing, whereas two thirds of the French vessels are less than 12 meters long. The challenge was to establish a statistical and an integrated approach supporting bio-ecological and economic issues. To further an integrated analysis of the fishery systems, the wide range kinds of data - including acoustic surveys, biological in-situ observations, environmental observations, as well as fishing statistics (landings and efforts) or economic data - are managed in a single data management system, based on an integrated relational data base with geographical facilities.

Droits : 2008 ICES
http://archimer.ifremer.fr/doc/00059/17002/14504.pdf
http://archimer.ifremer.fr/doc/00059/17002/

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Endocrine disrupting chemicals and especially oestrogen receptor (ER) agonists have been extensively studied over the years due to their potential effects on sexual development and reproduction in vertebrates, notably fish. As ER agonists can exist as complex mixtures in the aquatic environment, evaluating the impact of combined exposure on oestrogenic effects has become increasingly important. Use of predictive models such as concentration addition (CA) and independent action (IA) has allowed assessment of combined estrogenic effects of complex multi-compound mixtures of ER agonists in various fish in vitro and in vivo experimental models. The present work makes use of a transgenic zebrafish strain, tg(cyp19a1b-GFP), which expresses the green fluorescent protein (GFP) under the control of the cyp19a1b (brain aromatase or aromatase B) gene to determine the oestrogenic potency of ER agonists alone or in mixtures. In these studies, tg(cyp19a1b-GFP) zebrafish embryos were exposed for four days (from one to five days post fertilization) to five different oestrogenic chemicals; 17α-ethinylestradiol (EE2), 17β-estradiol (E2), estrone (E1), bisphenol A (BPA) and 4-tert-octylphenol (OP), and three mixtures of up to four of these compounds. The mixture of BPA, OP and E2 was also tested with primary cultures of rainbow trout hepatocytes by analysing the ER-mediated induction of the oestrogenic biomarker vitellogenin in order to compare the performance of the two methods for assessing oestrogenic effects of complex mixtures. The three tested mixtures were predominantly acting in an additive manner on the expression of GFP. Additivity was indicated by the overlap of the 95% confidence interval of the concentration response curves for the observed data with the CA and IA prediction models, and model deviation ratios within a factor of two for a majority of the mixture concentrations. However, minor deviations determined as more than additive effects for the mixture of EE2, E1 and E2 and less than additive effects for the mixture of BPA, OP, EE2 and E1 were observed at the higher mixture concentrations tested. The successful prediction of additivity by CA and IA in tg(cyp19a1b-GFP) zebrafish embryos and deviations at high mixture concentrations seemed to correspond well to results obtained in the rainbow trout hepatocyte assay. The present results clearly show the usefulness of combining predictive modelling and use of in vitro bioassays for rapid screening of oestrogenic effects of complex mixtures and environmental samples.
ISSN: 0166-445X

hal-00877351
https://hal.archives-ouvertes.fr/hal-00877351
DOI : 10.1016/j.aquatox.2013.05.001
PUBMED : 23721851

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : International audience
Seasonal climate forecasts mainly rely on the atmospheric sensitivity to its lower boundary conditions and on their own predictability. Besides sea surface temperature (SST), soil moisture (SM) may be an additional source of climate predictability particularly during boreal summer in the mid-latitudes. In this work, we investigate the role of SM initial conditions on near-surface climate predictability during ten boreal summer seasons using three complementary ensembles of AMIP-type simulations performed with the Arpège-Climat atmospheric general circulation model. First we have conducted an assessment of the SM predictability itself through a comparison of simple empirical SM models with Arpège-Climat. The statistical and dynamical models reveal similar SM prediction skill patterns but the Arpège-Climat reaches higher scores suggesting that it is at least suitable to explore the influence of SM initialization on atmospheric predictability. Then we evaluate the relationships between SM predictability and some near surface atmospheric predictability. While SM initialization obviously improves the predictability of land surface evaporation, it has no systematic influence on the precipitation and near surface temperature skills. Nevertheless, the summer hindcast skill is clearly improved during specific years and over certain regions (mainly north America and eastern Europe in the Arpège-Climat model), when and where the SM forcing is sufficiently widespread and strong. In this case, a significant impact is also found on the occurrence of heat waves and heavy rains, whose predictability at the seasonal timescale is a crucial challenge for years to come.
ISSN: 0930-7575

meteo-00346948
https://hal-meteofrance.archives-ouvertes.fr/meteo-00346948
DOI : 10.1007/s00382-008-0375-9

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Semi-Volatile Organic Compounds (SVOCs) are commonly present in dwellings and several are suspected of having effects on male reproductive function mediated by an endocrine disruption mode of action. To improve knowledge of the health impact of these compounds, cumulative toxicity indicators are needed. This work derives Benchmark Doses (BMD) and Relative Potency Factors (RPF) for SVOCs acting on the male reproductive system through the same mode of action. We included SVOCs fulfilling the following conditions: detection frequency (>10%) in French dwellings, availability of data on the mechanism/mode of action for male reproductive toxicity, and availability of comparable dose-response relationships. Of 58 SVOCs selected, 18 induce a decrease in serum testosterone levels. Six have sufficient and comparable data to derive BMDs based on 10 or 50% of the response. The SVOCs inducing the largest decrease in serum testosterone concentration are: for 10%, bisphenol A (BMD10= 7.72E-07 mg/kg bw/d; RPF10= 7033679); for 50%, benzo[a]pyrene (BMD50= 0.030 mg/kg bw/d; RPF50= 1630), and the one inducing the smallest one is benzyl butyl phthalate (RPF10 and RPF50= 0.095). This approach encompasses contaminants from diverse chemical families acting through similar modes of action, and makes possible a cumulative risk assessment in indoor environments. The main limitation remains the lack of comparable toxicological data.
ISSN: 0273-2300

hal-01237085
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01237085
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01237085/document
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01237085/file/Multiple%20exposures%20to%20indoor%20contaminants_accepted.pdf
DOI : 10.1016/j.yrtph.2015.11.017

Éditeur(s) : Soc Francaise D Ichtyologie
Résumé : This work deals with the fishing effects on the diversity dynamics of demersal fish communities, focusing on the biotic interactions. Multispecies indices were used in order to characterise the demersal fish community dynamics of the Bay of Biscay and of the Gulf of Lions. These are the diversity indices, the temporal variability of the total biomass and of the slope of the number size spectra and the slope of the species-area curves (spatial segregation). The data were provided by yearly bottom trawl surveys EVHOE, CHALIST and MEDITS carried out in these two areas since 1983 by IFREMER for stock assessment. The differences between areas are related to a fishing index (mean value of the annual landings of demersal fish per surface area). Other areas are included in the analysis when the index values are available from the published literature (North Sea, Scotian Shelf, Kenya, French Guyana). From the diversity indices analysis it is argued that the Gulf of Lions community is more diverse and less disturbed than the Bay of Biscay one. This result is not consistent with a fishing effect. It is interpreted as a biogeography pattern. The total biomass variability and the slope variability of size spectra are higher in the most harvested areas than in the least ones. On the contrary, the species-area slope is the lowest in the most harvested areas. Theoretically, biotic interactions decrease the total biomass variability and the spectra slope variability because of compensations, and increase the species area slope because of competitive exclusion. It is concluded that harvesting alters biotic interactions and favours local coexistence by decreasing competitive exclusion. The species diversity maintenance depends on competitive exclusion. Hence, biodiversity is threatened not only by a direct fishing effect but also by a dynamics alteration.
Ce mémoire aborde le problème de l'impact de l'exploitation par la pêche sur la dynamique de diversité des peuplements de poissons démersaux. Les effets de la pêche sur le rôle des interactions biotiques entre espèces dans la dynamique des peuplements sont plus particulièrement analysés à l'aide de descripteurs multispécifiques. Les descripteurs utilisés sont les indices de diversité, la variabilité temporelle de la biomasse totale et de la pente multispécifique du spectre de poids et la pente des droites d'accumulation d'espèces mesurant la ségrégation spatiale. Les valeurs de ces indices sont calculées à partir des données de campagnes annuelles de chalutage de fond EVHOE, CHALIST et MEDITS, menées par l'IFREMER depuis 1983 pour évaluer les ressources halieutiques dans le golfe de Gascogne et dans le golfe du Lion. Les différences de caractéristiques de dynamique entre les deux peuplements révélées par ces descripteurs sont mises en relation avec un indice d'exploitation (valeur moyenne des débarquements annuels, divisée par la surface du plateau de la région concernée). D'autres régions ont été intégrées dans cette analyse lorsque les valeurs des indicateurs étaient disponibles dans la littérature (Mer du Nord, plateau de Nouvelle-Ecosse, Kenya et Guyane Française). Les indices de diversité utilisés permettent de mettre en évidence que le peuplement du golfe du Lion est plus diversifié et moins soumis à perturbations que celui du golfe de Gascogne. Ces caractéristiques semblent dues à l'histoire biogéographique de ces deux régions et non à un effet de la pêche. La variabilité de la biomasse totale et celle de la pente du spectre multispécifique augmentent depuis les régions les moins exploitées vers les plus exploitées. A l'inverse, la ségrégation spatiale diminue. En théorie, les interactions entre espèces diminuent la variabilité temporelle de la biomasse totale et de la pente du spectre multispécifique, à cause de compensations entre espèces, et augmentent la ségrégation spatiale par exclusion compétitive. L'interprétation donnée des résultats obtenus est ainsi une altération des interactions entre les espèces par l'exploitation. En prélevant de la biomasse, l'exploitation augmente la disponibilité des ressources pour les individus non pêchés. En conséquence, l'exclusion compétitive diminue et la coexistence locale des individus est facilitée. A long terme, la diversité est donc menacée, non seulement par raréfaction des espèces prélevées par l'exploitation mais aussi parce que les interactions sont altérées et que le maintien de la diversité en dépend pour partie.
Cybium (0399-0974) (Soc Francaise D Ichtyologie), 2001 , Vol. 25 , N. 3 , P. 293-294

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/00000/10248/7688.pdf
http://archimer.ifremer.fr/doc/00000/10248/