Résumé : Le maintien de ressources génétiques suffisamment larges est nécessaire pour assurer la viabilité et le potentiel évolutif des populations naturelles. Cette thèse a le principal objectif de caractériser la diversité et la variabilité génétique chez le genre Virola (Myristicaceae) pour décrire les processus évolutifs qui en sont à l'origine. Premièrement,une étude de la régénération d'un échantillonnage exhaustif de V. michelii a été menée dans une parcelle du dispositif expérimental de Paracou ayant subi une exploitation forestière de faible intensité et comparée à une parcelle témoin. La diversité génétique mesurée à partir de marqueurs AFLP (Amplified Fragment-Length Polymorphism, N=229) en zones perturbées s'est révélée être plis grande qu'en zone non-perturbées. Puis, l'adaptation locale a été étudiée à travers ces mêmes individus et certains loci (AFLP) montrent une sélection divergente pour des environnements contrastés, indiquant un signe d'adaptation. Enfin, l'étude des niveaux de divergence génétique chez trois espèces de Virola du bouclier guyanais (V. michelii, V. surinamensis et V. kwatae) montrent que deux d'entre elles (V. surinamensis et V. kwatae) montrent de fortes similarités génétiques malgré leur distribution sur des environnements contrastés. des Flux de gènes intersécifiques ont été mis en évidence chez ces deux espèces-soeurs et l'hypothèse d'une spéciation écologique est avancée. Ce travail a permis d'aborder différents processus évolutifs à l'origine de la diversité génétique actuelle chez ces espèces forestières tropicales et peut fournir une contribution pour appréhender le devenir des populations.
Genetic diversity is an essential component of biodiversity. The maintenance of sufficient genetic resources is needed to ensure the adaptive potential and the viability of natural populations. In the current context of global changes, the study of adaptation in living organisms is a key task, particularly for tropical forest trees that are dominant components (in terms of biomass and as ecological drivers) of some of the most diverse ecosystems on Earth. The main objective of this thesis is to characterize genetic diversity and genetic variability to understand the evolutionary processes that act on them. This ecological-genetic study was carried out at the interspecific and intraspecific level in the Virola genus.If overall high levels of genetic diversity are a guarantee of prosperity for the future of the species, it seems essential to perform studies on the impact of environmental disturbance on genetic diversity. In the first section, the genetic consequences of regeneration dynamics were studied in an exhaustive sample of V. michelii in a low-intensity logging plot and in a control plot at the Paracou experimental site. A greater genetic diversity, measured from AFLP markers (Amplified Fragment Length Polymorphism, N = 229), was found in perturbed areas. Because studying genetic diversity within species may be useful for understanding species adaptation to environmental changes, in the second section. I studied local adaptation in a population of V. michelii on the Paracou experimental site. A genome scan approach with AFLPs (N = 229) was conducted on 77 adult individuals and 401 juveniles to identify genetic differences between populations associated to contrasting conditions for an array of environmental variables. Some loci (N = 2) were found to be subject to divergent selection, indicating adaptation to contrasting habitats.In the third section, the study of levels of genetic divergence in three Virola species of the Guiana Shield (V. michelii, V. surinamensis and V. kwatae) was investigated for nuclear and chloroplast molecular markers. V. surinamensis and V. kwatae showed strong genetic similarities despite their contrasting habitats preferences. Coalescent analyses have revealed, on one hand, a recent divergence between these two species suggesting an ecological speciation, and one the other hand that interspecific gene flow occurs between these sister-species.This work focuses on understanding evolutionary processes shaping genetic diversity and provides a useful contribution for biodiversity conservation programs.

http://www.theses.fr/2011AGUY0480/document

Éditeur(s) : HAL CCSD Elsevier
Résumé : We describe, test, and explain the relative effectiveness of six thermal and microwave techniques of absolute palaeointensity determination applied to lava samples from Mount Etna (Sicily) that acquired their thermoremanence (TRM) in a known geomagnetic field. The application of a single alternating field demagnetisation treatment prior to each measurement in a standard Thellier experiment is demonstrated to be beneficial: increasing the quality of the results and making the analysis simpler. A new quasi-perpendicular (QP) method dramatically improves the linearity of Arai plots by reducing or altogether eliminating non-ideal effects due to multidomain (MD) grains. Two broad types of sample were encountered by this study and the QP method is the only one capable of producing accurate measurements from them both. Its ease of use, speed, and increased reliability should allow it to replace standard double heating methods in studies such as these where laboratory alteration can be detected by other means than pTRM checks. The results of experiments performed using a microwave palaeointensity system provide further proof that the microwave (de)magnetisation process is equivalent to conventional thermal excitation. They also demonstrate that microwave experiments are subject to the same risks as conventional experiments when performed on samples containing MD grains. The behaviour of the samples in both the thermal and microwave experiments is in good agreement with a recently proposed model of MD TRM which is based on first-order symmetry of the remagnetisation process.
ISSN: 0012-821X

hal-00407671
https://hal.archives-ouvertes.fr/hal-00407671
DOI : 10.1016/j.epsl.2007.03.016

Éditeur(s) : HAL CCSD Wiley
Résumé : Sodium, an element which is needed by animals but often toxic in high concentrations to plants, may be deficient and limit animal abundance in inland continental regions, but may be overabundant and limit plant productivity in coastal regions. Here we present data from 50 independent plots (including leaf data from more than 2480 individual trees) showing that leaves in the Amazon basin uptake high amounts of sodium (Na) in a manner more similar to the essential cation potassium (K) than to the toxic cation aluminium (Al). Leaf Na increases linearly with soil Na concentrations, and there is no apparent mechanism for selective exclusion of Na in comparison to K, a key attribute of halophytes. This indicates that the Amazon basin is broadly non-halophytic and increased sodium concentrations in non-halophyte plants often decrease plant productivity. Total Na concentrations are approximate to 10 times higher in coastal regions than inland regions. Such concentration gradients in nutrients may have been reduced in the past because large animals that were abundant in the Pleistocene have been hypothesized to play a large role in reducing nutrient concentration gradients at continental scales. We use a diffusion model and a Na loss rate based on empirical data to estimate that large animals may have moved significant quantities of Na inland away from coastal regions in the Amazon Basin. Therefore, our simple model suggests that large animals may play an important, yet diminishing, role in maintaining the sodium balance of the planet.
ISSN: 0906-7590

hal-01531615
https://hal.archives-ouvertes.fr/hal-01531615
PRODINRA : 349612
DOI : 10.1111/ecog.01589

Éditeur(s) : HAL CCSD Ecological Society of America
Résumé : We investigated the relationship between habitat association and physiological performance in four congeneric species pairs exhibiting contrasting distributions between seasonally flooded and terra firme habitats in lowland tropical rain forests of French Guiana, including Virola and Iryanthera (Myristicaceae), Symphonia (Clusiaceae), and Eperua (Caesalpiniaceae). We analyzed 10-year data sets of mapped and measured saplings (stems 150 cm in height and <10 cm diameter at breast height [dbh]) and trees (stems 10 cm dbh) across 37.5 ha of permanent plots covering a 300-ha zone, within which seasonally flooded areas (where the water table never descends below 1 m) have been mapped. Additionally, we tested the response of growth, survival, and leaf functional traits of these species to drought and flood stress in a controlled experiment. We tested for habitat preference using a modification of the torus translation method. Strong contrasting associations of the species pairs of Iryanthera, Virola, and Symphonia were observed at the sapling stage, and these associations strengthened for the tree stage. Neither species of Eperua was significantly associated with flooded habitats at the sapling stage, but E. falcata was significantly and positively associated with flooded forests at the tree stage, and trees of E. grandiflora were found almost exclusively in nonflooded habitats. Differential performance provided limited explanatory support for the observed habitat associations, with only congeners of Iryanthera exhibiting divergent sapling survival and tree growth. Seedlings of species associated with flooded forest tended to have higher photosynthetic capacity than their congeners at field capacity. In addition, they tended to have the largest reductions in leaf gas exchange and growth rate in response to experimental drought stress and the least reductions in response to experimental inundation. The corroboration of habitat association with differences in functional traits and, to a lesser extent, measures of performance provides an explanation for the regional coexistence of these species pairs. We suggest that specialization to seasonally flooded habitats may explain patterns of adaptive radiation in many tropical tree genera and thereby provide a substantial contribution to regional tree diversity.
ISSN: 0012-9658

hal-01031746
https://hal.archives-ouvertes.fr/hal-01031746

Éditeur(s) : HAL CCSD
Résumé : International audience
Ripley’s K function is the classical tool to characterize the spatial structure of point patterns. It is widely used in vegetation studies. Testing its values against a null hypothesis usually relies on Monte-Carlo simulations since little is known about its distribution.We introduce a statistical test against complete spatial randomness (CSR). The test returns the p-value to reject the null hypothesis of independence between point locations. It is more rigorous and faster than classical Monte-Carlo simulations. We show how to apply it to a tropical forest plot. The necessary R code is provided.
International Scholarly Research Network, ISRN Ecology

hal-01502637
https://hal-agroparistech.archives-ouvertes.fr/hal-01502637
https://hal-agroparistech.archives-ouvertes.fr/hal-01502637/document
https://hal-agroparistech.archives-ouvertes.fr/hal-01502637/file/2013_Marcon_Hindawi%20Publishing%20Corporation_%7B7A602F34-6983-47DE-924B-7CDC3B8D14F7%7D.pdf
DOI : 10.1155/2013/753475

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
In pre-drift reconstructions, the central and southern parts of the Borborema Province, northeastern Brazil, belong to a large Brasiliano-Pan-African orogenic realm situated to the north of the São Francisco-Congo Craton. In order to better understand the timing and geodynamic setting under which this orogenic system developed, a structural, geochemical and geochronological study was conducted across the east Pernambuco shear zone (EPSZ) system, which separates the Pernambuco-Alagoas Domain (PEAL) from the Central Domain. A sample of the Pinhões orthogneiss (GE-1), in the Central Domain, one sample of a syenitic orthogneiss (CA-34) wrapped by the EPSZ, and one sample of orthogneiss named Altinho (CA-40), in the northern portion of the PEAL, were dated by LA-ICP-MS. The Pinhões orthogneiss yielded an age of 869 ± 9 Ma, interpreted as the emplacement age of the protolith during a late Tonian magmatic episode. Samples CA-40 and CA-34 yielded 206Pb/238U weighted mean ages of 652 ± 6 Ma and 636 ± 3 Ma, respectively, which are interpreted as dating emplacement and crystallization of the magmatic protoliths. However, it is also possible that these rocks were formed during the same magmatic event in view of the identical ages of 646 ± 13 Ma and 646 ± 11 Ma, respectively, given by the less precise upper intercept of the discordia lines. The metaluminous and magnesian nature of the Altinho orthogneiss is akin to the calc-alkalic suite. However, some samples plot in the intraplate field in tectonic discrimination diagrams and the Nd TDM model age of 1.36 Ga is unlike that of juvenile magmas in convergent settings. The Altinho orthogneiss is quite similar in terms of trace elements geochemistry to the syenitic orthogneiss, which has a clearer intraplate affinity, and the dated samples have identical initial Sr isotope ratios (0.7047). Therefore, emplacement in an extensional setting is preferred over a convergent one. Two samples of paragneisses (SB-1 and BB-9) from the PEAL were also dated. The ages of the youngest zircon grains in sample BB-9 (655–642 Ma) overlap the crystallization age of the Altinho orthogneiss, implying that sedimentation is younger than or, at best, synchronous with magmatism. The age of low Th/U grains in samples CA-34 (615 ± 8 Ma) and SB-1 (587 ± 12 Ma) are related to a subsequent metamorphic overprint, which is loosely constrained between 580 and 620 Ma. These observations, combined with evidence provided by previous studies, suggest that the change from an extensional to a contracional setting occurred at ca. 640–630 Ma. In contrast with most collisional orogens, where a long period of oceanic subduction precedes collision, the inferred tectonic evolution suggests that the Brasiliano Orogeny resulted from inversion of continental and/or proto oceanic rifts.
ISSN: 0895-9811

hal-01174182
https://hal.archives-ouvertes.fr/hal-01174182
DOI : 10.1016/j.jsames.2014.06.004

Éditeur(s) : HAL CCSD
Résumé :   Diffusion du document : INRA Antilles-Guyane, UMR ECOFOG, F97387 Kourou, Guyane (France) Diplôme : DEA
il s'agit d'un type de produit dont les métadonnées ne correspondent pas aux métadonnées attendues dans les autres types de produit : DISSERTATION
This work on tropic al humid forest of Paracou includes 16 permanent sample plots covering a total surface of 119 hectares. Ten hectares of them are taken up by floodplains which characteristic is a continuous no-deep underground water level with phases of strong surface water logging. Three items have been studied : (i) Checking that during dry season the maps of the underground water level including its limits are reliable, (ii) Characterising the most suitable ecological niches for certain species, (iii) Additional updating the floodplains characterisation by precisely analysing the chemical soil content as well as the physiological reaction of the Symphonia Globulifera . Checking the underground water level in dry season enabled to put down to a quite good measurement reliability by GIS. The classification ecological of species proposed in this work is based on the relative density in floodplain and drain soil very similar to that which concerns a surface located ten or more kilometres further. This lets us assess that this classification is of a good reliability as long as the climate conditions are quite similar to ours in Paracou. Furthermore the presence of pneumatophores in the Symphonia Globulifera is a good biological criterion as long as it shows a long time ground moisture saturation. By analysing the life litter and the soil we mentioned that the leaf content and the soil content indicate a better nutritional value (phosphorus, calcium and potassium) in the floodplains. For phosphorus the relation between the life litter and the soil results put forward that the Olsen method gives a better explanation of the real phosphorus availability for the trees.
Le dispositif de recherche sur la forêt tropicale humide de Paracou est composé de 16 parcelles permanentes couvrant au total 119 ha, dont 10 ha sont occupés par des bas-fonds, caractérisés par l'existence permanente d'une nappe peu profonde et par des périodes de fort engorgement en surface. Notre étude avait trois objectifs : (i) vérifier la fiabilité des cartes de la profondeur de nappe en saison sèche, qui délimitent ces bas-fonds, (ii) caractériser les préférences écologiques de quelques espèces et (iii) compléter la caractérisation des bas-fonds par l'analyse de la richesse chimique du sol et l'étude de la réaction physiologique du Symphonia globulifera. La vérification sur la profondeur de nappe en saison sèche a montré que les imprécisions des cartes étaient d'ampleur limitée, sans incidence forte par rapport à l'ensemble des données. Le classement écologique des espèces proposé dans cette étude, basé sur leurs densités relatives dans les bas-fonds et hors des bas-fonds, est très similaire à celui présenté par une autre étude, dans un dispositif situé à plusieurs dizaines de kilomètres. Cela suggère que ce classement a une bonne validité, tant que les conditions climatiques ne diffèrent pas trop de celles rencontrées à Paracou. Par ailleurs, la présence des pneumatophores du Symphonia globulifera est un bon critère biologique signalant un engorgement hydrique prolongé du sol. Au niveau des analyses de la litière et du sol, les teneurs foliaires et les teneurs dans le sol semblent indiquer que la nutrition en phosphore, calcium et potassium est meilleure en bas-fonds. Au niveau de la méthode de mesure du phosphore assimilable, les relations entre les résultats de la litière et celles du sol suggèrent que la méthode d'Olsen rend mieux compte de la disponibilité effective du phosphore pour les arbres de la forêt tropicale humide que la méthode de Duchaufour.
https://hal.archives-ouvertes.fr/hal-01189229

hal-01189229
https://hal.archives-ouvertes.fr/hal-01189229
PRODINRA : 17050

Éditeur(s) : HAL CCSD European Geosciences Union
Résumé : This study presents a unique database of 172 plagioclase Crystallographic Preferred Orientations (CPO) of variously deformed gabbroic rocks. The CPO characteristics as a function of the deformation regime (magmatic or crystal-plastic) are outlined and discussed. The studied samples are dominantly from slow- and fast-spread present-day ocean crust, as well as from the Oman ophiolite. Plagioclase is the dominant mineral phase in the studied samples. Plagioclase CPOs are grouped into three main categories: Axial-B, a strong point alignment of (010) with a girdle distribution of [100]; Axial-A, a strong point maximum concentration of [100] with parallel girdle distributions of (010) and (001); and P-type, point maxima of [100], (010), and (001). A majority of CPO patterns are Axial-B and P-type, in samples showing either magmatic or crystal-plastic deformation textures. Axial-A CPOs are less common; they represent 21% of the samples deformed by crystal-plastic flow. Although fabric strength (ODF J index) does not show any consistent variation as a function of the CPO patterns, there is a significant difference in the relationship between the ODF and pole figures J indices; the magmatic type microstructures have high (010) pole figures J indices, which increase linearly with ODF J index, whereas the high [100] pole figures J indices of plastically deformed samples vary in a more scattered manner with ODF J index. The multistage nature of plastic deformation superposed on a magmatic structure compared with magmatic flow, and the large number of possible slip-systems in plagioclase probably account for these differences. Calculated seismic properties (P wave and S wave velocities and anisotropies) of plagioclase aggregates show that anisotropy (up to 12% for P wave and 14% for S wave) tends to increase as a function of ODF J index. In comparison with the olivine 1998 CPO database, the magnitude of P wave anisotropy for a given J index is much less than olivine, whereas it is similar for S wave anisotropy. Despite a large variation of fabric patterns and geodynamic setting, seismic properties of plagioclase-rich rocks have similar magnitudes of anisotropy. There is a small difference in the aggregate elastic symmetry, with magmatic microstructures having higher orthorhombic and hexagonal components, whereas plastic deformation microstructures have a slightly higher monoclinic component, possibly correlated with predominant monoclinic simple shear flow in plastically deformed samples. Overall, plots for CPO strength (ODF J index), pole figure strength, CPO symmetry and seismic anisotropy show significant scattering. This could be related to sampling statistics, although our database is a factor of ten higher than the olivine database of 1998, or it could be related to the low symmetry (triclinic) structure of plagioclase resulting in the addition of degrees of freedom in the processes creating the CPOs.
ISSN: 1869-9510

hal-00963439
https://hal.archives-ouvertes.fr/hal-00963439
DOI : 10.5194/se-4-511-2013

Éditeur(s) : HAL CCSD Wiley
Résumé : International audience
ISSN: 1100-9233

hal-01092514
https://hal-agroparistech.archives-ouvertes.fr/hal-01092514
DOI : 10.1111/j01654-1103.2010.01175.x

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
In pre-drift reconstructions, the central and southern parts of the Borborema Province, northeastern Brazil, belong to a large Brasiliano-Pan-African orogenic realm situated to the north of the São Francisco-Congo Craton. In order to better understand the timing and geodynamic setting under which this orogenic system developed, a structural, geochemical and geochronological study was conducted across the east Pernambuco shear zone (EPSZ) system, which separates the Pernambuco-Alagoas Domain (PEAL) from the Central Domain. A sample of the Pinhões orthogneiss (GE-1), in the Central Domain, one sample of a syenitic orthogneiss (CA-34) wrapped by the EPSZ, and one sample of orthogneiss named Altinho (CA-40), in the northern portion of the PEAL, were dated by LA-ICP-MS. The Pinhões orthogneiss yielded an age of 869 ± 9 Ma, interpreted as the emplacement age of the protolith during a late Tonian magmatic episode. Samples CA-40 and CA-34 yielded 206Pb/238U weighted mean ages of 652 ± 6 Ma and 636 ± 3 Ma, respectively, which are interpreted as dating emplacement and crystallization of the magmatic protoliths. However, it is also possible that these rocks were formed during the same magmatic event in view of the identical ages of 646 ± 13 Ma and 646 ± 11 Ma, respectively, given by the less precise upper intercept of the discordia lines. The metaluminous and magnesian nature of the Altinho orthogneiss is akin to the calc-alkalic suite. However, some samples plot in the intraplate field in tectonic discrimination diagrams and the Nd TDM model age of 1.36 Ga is unlike that of juvenile magmas in convergent settings. The Altinho orthogneiss is quite similar in terms of trace elements geochemistry to the syenitic orthogneiss, which has a clearer intraplate affinity, and the dated samples have identical initial Sr isotope ratios (0.7047). Therefore, emplacement in an extensional setting is preferred over a convergent one. Two samples of paragneisses (SB-1 and BB-9) from the PEAL were also dated. The ages of the youngest zircon grains in sample BB-9 (655–642 Ma) overlap the crystallization age of the Altinho orthogneiss, implying that sedimentation is younger than or, at best, synchronous with magmatism. The age of low Th/U grains in samples CA-34 (615 ± 8 Ma) and SB-1 (587 ± 12 Ma) are related to a subsequent metamorphic overprint, which is loosely constrained between 580 and 620 Ma. These observations, combined with evidence provided by previous studies, suggest that the change from an extensional to a contracional setting occurred at ca. 640–630 Ma. In contrast with most collisional orogens, where a long period of oceanic subduction precedes collision, the inferred tectonic evolution suggests that the Brasiliano Orogeny resulted from inversion of continental and/or proto oceanic rifts.
ISSN: 0895-9811

hal-01174177
https://hal.archives-ouvertes.fr/hal-01174177
DOI : 10.1016/j.jsames.2014.09.007

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : Geomorphic landscape features have been suggested as indicators of forest diversity. However, their explanatory power has not yet been explicitly tested at a regional scale in tropical rainforest. We used forest inventories conducted according to a stratified sampling design (3,132 plots in 111 transects at 33 sites) and holistic multi-scale geomorphological mapping derived from a Shuttle Radar Topography Mission digital elevation model to describe and explain spatial patterns in floristic composition across French Guiana (80,000 km2). We measured and identified 123,906 trees with DBH C20 cm and used constrained and unconstrained ordinations to analyze variations in the abundance of 221 taxa and 51 families. Variance partitioning and variograms were used to detect spatial patterns in species composition, compare the explanatory power of spatial and environmentalfactors, and select the variables that best explain forest composition. Strong floristic patterns corresponded to a major latitudinal gradient and significant sub-regional floristic structure. Geomorphological landscapes shaped by historic climate fluctuations and major geological events successfully captured these patterns and explained the variation in abundance of 80 taxa, corresponding to 65 % of the inventoried trees. Our findings suggest that long-term forest dynamics are under substantial ‘‘geomorphographic control’’. A geomorphological perspective on landscapes that incorporates current and past environmental filters and historical biogeographical processes could thus be used more systematically in tropical regions for regional planning and forest conservation
ISSN: 0960-3115

hal-01204224
https://hal.archives-ouvertes.fr/hal-01204224
DOI : 10.1007/s10531-014-0854-8
PRODINRA : 295767

Éditeur(s) : Elsevier
Résumé : The combined use of Lu-Hf and Sm-Nd isotope systems potentially offers a unique perspective for investigating continental erosion, but little is known about whether, and to what extent, the Hf-Nd isotope composition of sediments is related to silicate weathering intensity. In this study, Hf and Nd elemental and isotope data are reported for marine muds, leached Fe-oxide fractions and zircon-rich turbidite sands collected off the Congo River mouth, and from other parts of the SE Atlantic Ocean. All studied samples from the Congo fan (muds, Fe-hydroxides, sands) exhibit indistinguishable Nd isotopic composition (epsilon(Nd)similar to - 16), indicating that Fe-hydroxides leached from these sediments correspond to continental oxides precipitated within the Congo basin. In marked contrast, Hf isotope compositions for the same samples exhibit significant variations. Leached Fe-hydroxide fractions are characterized by epsilon(Hf) values (from -1.1 to +13) far more radiogenic than associated sediments (from -7.1 to -12.0) and turbidite sands (from -27.2 to -31.6). epsilon(Hf) values for Congo fan sediments correlate very well with Al/K (i.e. a well-known index for the intensity of chemical weathering in Central Africa). Taken together, these results indicate that (1) silicate weathering on continents leads to erosion products having very distinctive Hf isotope signatures, and (2) a direct relationship exists between epsilon(Hf) of secondary clay minerals and chemical weathering intensity. These results combined with data from the literature have global implications for understanding the Hf-Nd isotope variability in marine precipitates and sediments. Leached Fe-hydroxides from Congo fan sediments plot remarkably well on an extension of the 'seawater array' (i.e. the correlation defined by deep-sea Fe-Mn precipitates), providing additional support to the suggestion that the ocean Hf budget is dominated by continental inputs. Fine-grained sediments define a diffuse trend, between that for igneous rocks and the,seawater array', which we refer to as the 'zircon-free sediment array' (epsilon(Hf)=0-91 epsilon(Nd)+3.10). Finally, we show that the Hf-Nd arrays for seawater, unweathered igneous rocks, zircon-free and zircon-bearing sediments (epsilon(Hf)= 1.80 epsilon(Nd)+2.35) can all be reconciled, using Monte Carlo simulations, with a simple weathering model of the continental crust. (C) 2008 Elsevier B.V. All rights reserved.
Earth and Planetary Science Letters (0012-821X) (Elsevier), 2009 , Vol. 277 , N. 3-4 , P. 318-326

Droits : 2009 Elsevier B.V. All rights reserved.
http://archimer.ifremer.fr/doc/2009/publication-6451.pdf
DOI:10.1016/j.epsl.2008.10.028
http://archimer.ifremer.fr/doc/00000/6451/

Éditeur(s) : HAL CCSD
Résumé : International audience
(Guava (Psidium guajava L.) is a tropical fruit widely consumed around the world. The study wascarried out on four selected guava varieties grown in Martinique. Two fruit harvests were gathered at two-yearintervals, at the green/yellow color change maturity stage. First, we established the homogeneity of all fruitbatches by bootstrapping, ANOVA, box plot and multiple comparison statistical analysis on physicalparameters. Red Supreme Ruby clearly differs from the other three varieties, whereas the results for CentenoProlific are between Beauséjour and Enana Cuba. We determined on puree obtained from a homogeneousbatch of each variety the physicochemical and functional properties as well as the antioxidant properties. Ourresults show that the combination of lycopene and vitamin C, and their synergistic mechanisms in the fruitextracts may be responsible for the high antioxidant activity of guava puree, and we demonstrate a statisticallysignificant positive correlation between EC50 and lycopene.
IOSR Journal of Environmental Science, Toxicology and Food Technology (IOSR-JESTFT)

hal-01672064
https://hal.univ-antilles.fr/hal-01672064
DOI : 10.9790/2402-1109015767

Éditeur(s) : HAL CCSD
Résumé : International audience
Recent studies have shown that accounting for intraspecific trait variation (ITV) may better address major questions in community ecology. However, a general picture of the relative extent of ITV compared to interspecific trait variation in plant communities is still missing. Here, weconducted a meta-analysis of the relative extent of ITV within and among plant communities worldwide, using a data set encompassing 629 communities (plots) and 36 functional traits. Overall, ITV accounted for 25% of the total trait variation within communities and 32% of the totaltrait variation among communities on average. The relative extent of ITV tended to be greater for whole-plant (e.g. plant height) vs. organ-level traits and for leaf chemical (e.g. leaf N and P concentration) vs. leaf morphological (e.g. leaf area and thickness) traits. The relative amount of ITV decreased with increasing species richness and spatial extent, but did not vary with plant growth form or climate. These results highlight global patterns in the relative importance of ITV in plant communities, providing practical guidelines for when researchers should include ITV in trait-based community and ecosystem studies.
Ecology Letters

hal-01237101
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01237101
DOI : 10.1111/ele.12508
PUBMED : 26415616

Éditeur(s) : HAL CCSD
Résumé : Gravitropism is a major process in vertical growth as it allows the positioning of plant in the gravity field and thus, for trees, it takes part in the light foraging strategies. Without any gravitropism, trees would adopt a weeping habit or fall on the ground due to the increasing with growth supported weight, especially at the advance regeneration stage (sapling stage) in the understorey, where tree are very slender and poorly stiff. Most of the gravitropic studies are made by physiologists in order to understand the process and thus are associated to complex laboratory methods (genetic engineering, anatomical studies, accurate 2D ou 3D measurements of form changes with time). In order to study the ecological relevance and the specific diversity of gravitropic performances in natural forests, we developed a framework that uses different kinds of datas. Synchronical analysis has been done i) at the population level in large sample of trees and ii) at the tree level from destructive measurement of the dissymmetry maturation strains known to be the main motor of the posture control reaction of trees. In both cases, biomechanical models allows to estimate some aspects of the dynamic gravitropic process. Diachronical analysis has been done in natural conditions on permanent plots, or in a more traditional way, by observing in greenhouse experiments the righting movements of plants artificially tilted. In the first case, the problem is the high variability of natural disturbances and the slowness of growth and movements in the dark understorey. The second choice allows a measurement of a capacity (i.e. the ability of the species to react in quite extreme conditions of verticality disturbance but good for growth light and nutrient conditions) that is more easy to analyse, but is maybe not so relevant for estimating the ecological strategy (some species could have developed a high efficience of gravitropic reaction in natural conditions by avoiding the mechanical disturbance or adapting the reaction to slow growth and changing environments in natural conditions). All approaches use the same basic biomechanical modelling, i) to analyse simultaneously the reaction and the disturbance (due to the weight increase) during growth, or ii) to combine different parameters (geometry, growth, weight, maturation strains) involved in shape changes and posture control. They give a classification of the species according to their gravitropic performances. Results on 15 species are discussed, with relation to shade-tolerance or avoidance.
6th Plant Biomechanics Conference
Cayenne, France

hal-00565956
https://hal.archives-ouvertes.fr/hal-00565956

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : Understanding the ability of ecosystem processes to resist to and to recover from disturbances is critical to sustainable land use. However, the spatial variability of the stability has rarely been addressed. Here, we investigated the functional stability of a soil microbial process for 24 soils collected from adjacent locations from a 0.3 ha tropical rainforest plot in Paracou, French Guiana. The 24 locations were characterized regarding soil chemical and biological (microbial diversity) parameters and forest structure. The corresponding soils were submitted to an experimental transient heat disturbance during a microcosm experiment. The response of the respiration process was followed using substrate-induced respiration (SIR). The response of soil SIR to heat disturbance varied widely between samples. The variability of the SIR response increased just after the disturbance, and a global rather homogeneous decrease in SIR rates was observed 15 and 30 days after. The stability of SIR in response to heat disturbance could not be related to either the genetic or the metabolic diversity of the microbial community. The initial level of SIR before the disturbance was the soil variable that best correlated with the impact of the disturbance: the soil locations with the highest initial SIR rates were the most affected 15 and 30 days after the heat disturbance. Such a heterogeneous response suggests that the response of soil processes to a disturbance will be difficult to assess from only local-scale analyses and highlights the need for spatial explicitness in understanding biogeochemical processes.
ISSN: 1439-0108

hal-01204209
https://hal.archives-ouvertes.fr/hal-01204209
DOI : 10.1007/s11368-012-0528-7
PRODINRA : 214444

Éditeur(s) : HAL CCSD
Résumé : International audience
The aboveground biomass density (AGBD) or aboveground carbon density is mapped for the rainforest of the Basse-Terre Island (Guadeloupe, French West Indies). This mapping is the first devoted to the rainforest of the Lesser Antilles.Mapping AGBD needs the successive realization of two steps. At first, AGBD was estimated in studied forest plots where trees were individually measured; secondly these local estimations were extended through multiple regression including remote sensing LiDAR measurements.Due to the structural specificity of the Caribbean-islands forests, applying general allometry relationship overestimates tree above-ground biomass. Yet we take advantage of pantropical database (Chave et al. 2014) by adopting a suitable statistical procedure: bayesian mixed decision rule.Despite the reduced canopy height, generally less than 35 m, Caribbean lowland rainforests have a high biomass, in every respect comparable to that of continental lowland forests. Such peculiarity is achieved through increased tree density that compensate for lower canopy height.
CAS
Deshaies, Guadeloupe

hal-01514241
https://hal.archives-ouvertes.fr/hal-01514241

Éditeur(s) : HAL CCSD Oxford University Press (OUP)
Résumé : International audience
Mantle-derived xenoliths hosted by melilitite lavas from In Teria (Ahaggar, SE Algeria) include garnet and spinel peridotites, pyroxenite and phlogopite megacrysts. The spinel and garnet peridotites record an early deformation event, which formed porphyroclastic microstructures and olivine crystal preferred orientations, followed by static infiltration of hydrous alkaline melts. This metasomatic stage (stage 1) is characterized by the crystallization of phlogopite in the garnet and spinel peridotites, amphibole in the spinel peridotites and clinopyroxene in the garnet peridotite, which record chemical equilibration with an alkaline silicate melt. These early events were largely overprinted by carbonatitic metasomatism (stage 2), which is observed only in the spinel peridotites. Spinel peridotite major and trace element compositions, as well as the compositions of newly formed minerals, are characteristic of interaction with carbonate melt, associated with strong enrichment in incompatible trace elements in clinopyroxene. This second stage was followed by crystallization of pyroxenites (stage 3) in vein conduits, probably segregated from alkaline melts. We propose a scenario in which the different metasomatic imprints record successive stages of interaction between lithospheric mantle and sublithospheric melts throughout the Cenozoic. In Sr–Nd isotope space, the host melilitites and several xenoliths are clustered and plot close to the HIMU mantle end-member. However, some peridotite xenoliths are shifted towards more radiogenic 87Sr/86Sr values. In 207Pb/204Pb–206Pb/204Pb and 208Pb/204Pb–06Pb/204Pb space the In Teria samples define a relatively large domain characterized by high 206Pb/204Pb and 208Pb/204Pb, consistent with a contribution of an HIMU component, considered to represent a sublithospheric signature. The highest 87Sr/86Sr values are comparable with those ascribed to the EM1 mantle end-member, representing the signature of the lower continental lithosphere, and are probably inherited from the pre-metasomatic lithospheric mantle beneath In Teria. Numerical modelling of porous percolation of melt of sublithospheric origin through an EM1-like lithospheric mantle protolith reproduces the In Teria peridotite compositions, using moderately sub-chondritic Sr/Nd values for the peridotite (e.g. In Teria garnet peridotite) and moderately super-chondritic Sr/Nd values in the melt (approximately ocean island basalt values). A few spinel peridotites require a component characterized by a 143Nd/144Nd signature higher than both the EM1 end-member and the local Ahaggar basalts; the 208Pb/204Pb compositions of several samples point to a component with a depleted mid-ocean ridge basalt (MORB) mantle (DMM) signature. Thus the lithospheric mantle beneath In Teria probably did not have a uniform EM1 signature before the onset of metasomatism; it included a DMM peridotite component as well as some peridotites with elevated 143Nd/144Nd values recording long-term LREE depletion.
ISSN: 0022-3530

hal-01356781
https://hal.archives-ouvertes.fr/hal-01356781
DOI : 10.1093/petrology/egw009

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Whole-rock concentrations of Se and Te were determined in 53 peridotite samples collected in orogenic bodies from the Eastern Pyrenees, including the Lherz massif (33 samples), the type-locality of Iherzolite. Orogenic Iherzolites tectonically emplaced into the continental crust escaped devolatilisation that may strongly alter concentrations of those volatile trace elements in basalt-hosted peridotite xenoliths. The Se and Te concentration ranges (<3.5-100.7 ppb; <1-11 ppb) are consistent with the few analyses of mantle samples yet available, yet extending to higher Se concentrations. In-situ analyses performed by LAM-ICPMS on base metal sulfides indicate that the Se budget is controlled by sulfides whereas a large fraction of Te (50 +/- 30%) does not reside in sulfides. The missing fraction is accounted for by fractional crystallization of Pt-Pd tellurides from Cu-Ni sulfide melts. A maximum of one third of the S budget of Eastern Pyrenean peridotites was added by assimilation of crustal sulfides, which crystallized as pyrite. Disregarding those contaminated samples, some features of the Se and Te systematics (e.g. bivariate plots vs. fertility index) cannot be explained by partial melting processes. The best fit for 33 peridotites (mostly from Lherz) yields higher than chondritic S/Se (3.1213 +/- 500; r(2) = 0.96) for near chondritic Se/Te (8.6 +/- 2; r(2) = 0.9). Our study suggest that such superchondritic S/Se ratios are better explained by petrogenetic processes involving refertilization of harzburgitic lithosphere by metal (Cu,Ni)-rich sulfide melts precipitated along with clinopyroxene and Al-spinel from silicate melts en-route to the surface.
ISSN: 0009-2541

hal-00544577
https://hal.archives-ouvertes.fr/hal-00544577
DOI : 10.1016/j.chemgeo.2010.09.007

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
An inter-laboratory exercise was organized under the PHARMAS EU project, by the Advanced School of Public Health (EHESP), in order to evaluate the performances of analytical methods for the measurement of antibiotics in waters (surface and tap). This is the first time such an exercise on antibiotics has been organized in Europe, using different kinds of analytical methods and devices. In this exercise thirteen laboratories from five countries (Canada, France, Italy, the Netherlands and Portugal) participated, and a total number of 78 samples were distributed. During the exercise, 2 testing samples (3 bottles of each) prepared from tap water and river water, respectively, spiked with antibiotics, were sent to participants and analyzed over a period of one month. A final number of 77 (98.7%) testing samples were considered. Depending on substances studied by each participant, 305 values in duplicate were collected, with the results for each sample being expressed as the target concentration. A statistical study was initiated using 611 results. The mean value, standard deviation, coefficient of variation, standard uncertainty of the mean, median, the minimum and maximum values of each series as well as the 95% confidence interval were obtained from each participant laboratory. In this exercise, 36 results (6% of accounted values) were outliers according to the distribution over the median (box plot). The outlier results were excluded. In order to establish the stability of testing samples in the course of the exercise, differences between variances obtained for every type of sample at different intervals were evaluated. The results showed no representative variations and it can be considered that all samples were stable during the exercise. The goals of this inter-laboratory study were to assess results variability when analysis is conducted by different laboratories, to evaluate the influence of different matrix samples, and to determine the rate at which participating laboratories successfully completed the tests initiated.
Talanta

hal-00878118
https://hal.archives-ouvertes.fr/hal-00878118
DOI : 10.1016/j.talanta.2012.06.064
PUBMED : 22939142