Éditeur(s) : HAL CCSD Public Library of Science
Résumé : International audience
BACKGROUND: Dengue and malaria are two major public health concerns in tropical settings. Although the pathogeneses of these two arthropod-borne diseases differ, their clinical and biological presentations are unspecific. During dengue epidemics, several hundred patients with fever and diffuse pain are weekly admitted at the emergency room. It is difficult to discriminate them from patients presenting malaria attacks. Furthermore, it may be impossible to provide a parasitological microscopic examination for all patients. This study aimed to establish a diagnostic algorithm for communities where dengue fever and malaria occur at some frequency in adults. METHODOLOGY/PRINCIPAL FINDINGS: A sub-study using the control groups of a case-control study in French Guiana - originally designed to compare dengue and malaria co-infected cases to single infected cases - was performed between 2004 and 2010. In brief, 208 patients with malaria matched to 208 patients with dengue fever were compared in the present study. A predictive score of malaria versus dengue was established using .632 bootstrap procedures. Multivariate analysis showed that male gender, age, tachycardia, anemia, thrombocytopenia, and CRP>5 mg/l were independently associated with malaria. The predictive score using those variables had an AUC of 0.86 (95%CI: 0.82-0.89), and the CRP was the preponderant predictive factor. The sensitivity and specificity of CRP>5 mg/L to discriminate malaria from dengue were of 0.995 (95%CI: 0.991-1) and 0.35 (95%CI 0.32-0.39), respectively. CONCLUSIONS/SIGNIFICANCE: The clinical and biological score performed relatively well for discriminating cases of dengue versus malaria. Moreover, using only the CRP level turned to be a useful biomarker to discriminate feverish patients at low risk of malaria in an area where both infections exist. It would avoid more than 33% of unnecessary parasitological examinations with a very low risk of missing a malaria attack.
ISSN: 1935-2727

inserm-00872353
http://www.hal.inserm.fr/inserm-00872353
http://www.hal.inserm.fr/inserm-00872353/document
http://www.hal.inserm.fr/inserm-00872353/file/journal.pntd.0002420.pdf
DOI : 10.1371/journal.pntd.0002420

Éditeur(s) : HAL CCSD American Chemical Society
Résumé : International audience
People spend a considerable amount of time indoors. As a result, exposure to indoor contaminants is of great concern, notably via settled dust ingestion in particular for infants and toddlers. This paper proposes a critical review on the organic contamination of settled house dust and human exposure over the past 10 years and focused on sources, contaminations and measurement methods (sampling, pretreatment, storage and analysis). As many compounds were identified, arises the question of which ones to consider. Sensitive and selective analytical methods for simultaneous determination of targeted substances should be developed and evaluated. Various methods were described for sampling and sample preparation. Harmonization and standardization are needed to enable comparison of results from similar studies. Finally, an integrated multipollutant and multicompartment (settled dust, suspended particles and air) approach appears essential in order to determine the extent of the threat to public health posed by indoor contaminants.
ISSN: 0013-936X

hal-00687396
https://hal.archives-ouvertes.fr/hal-00687396
DOI : 10.1021/es200925h
PUBMED : 21667945

Éditeur(s) : HAL CCSD Wiley
Résumé : Clay shale landscapes are sensitive to landslide, erosion, and re-sedimentation processes. In this context, tectonized clay shales have peculiar hydrological and mechanical behaviours. In order to improve our understanding of the processes involved in such systems, an experimental site has been settled in the Draix Observatory (ORE DRAIX) on a black marl hill slope of the Southern Alps (France) in the framework of the ECOU-PREF project. The site is a natural laboratory to study the evolution of clay shale landscapes at several scales (regional to µm). In this study, we aim to characterize the internal structure and fissure patterns of a stable interfluve, in order to locate preferential water flows within the system, and anticipate its evolution. This work is based on a series of mutli-disciplinary approaches including petrophysical analyses, well pulse injection tests and downhole geophysical measurements. Borehole geophysical results were combined with laboratory measurements on core plugs (permeability, density, porosity, and acoustic velocity). Optical and acoustical images have been used as an original tool for internal discontinuities characterisation and potential active flow path detection. They allowed the identification of three main lithological units interpreted as several stages of shale alteration. In addition, several main structural plane discontinuities (open fractures, schistosity planes, and fractures infilled with calcite or clays) were identified from the images and their potential transmissivity discussed with regard to piezometric and tracer measurements. In all, the integration of measurements leads to propose a simple scenario of fluid circulation and chemical alteration of the interfluve.
ISSN: 0885-6087

hal-00757581
https://hal.archives-ouvertes.fr/hal-00757581
DOI : 10.1002/hyp.7997

Éditeur(s) : HAL CCSD
Résumé : International audience
Introduction: Type 1 diabetes mellitus, a T cell-mediated autoimmune disease, is a complex process that results from the loss of tolerance to insulin and other beta-cell-specific antigens. Diabetes is associated with an increased risk of death from infectious disease. Hyperglycaemia, oxidative stress and inflammation have been identified as the main factor contributing to the development of diseases associated with diabetes mellitus. However, experimental evidence indicates individual susceptibility to develop complications of diabetes. Various genetic and environmental factors have been studied so far, but precise causation has yet to be established. Numerous studies in rodents and human subjects have been performed in order to elucidate the role of B and T cells, which determine the risk of development and progression of diabetes. Moreover, the therapy management of diabetes includes nutritional recommendations and exercise training. The effects of exercise training on glycemia, oxidative stress, inflammation and immune response are well known and favorable to limit the development of diabetes and its complications. More interestingly, ?-galacto-oligosaccharides (?-GOS) are prebiotics that selectively alter the composition of gut microbiota and exhibit strong antioxidant, anti- inflammatory and insulin-sensitive effects in vitro (Efstathiou and Fathi 2010) and in vivo (Boucher J et al. 2003). Thus, ? -GOS is a potential functional food for the treatment of diabetes. But, less is known about the effect of training and ? –GOS on immune response in diabetes. In this context, the aim of this work was to study the immune response in a streptozotocin-induced type 1 diabetes with two therapeutic means: training and ?-galacto-oligosaccharides (?-GOS) alone or combined. Methods: Forty-two male Wistar rats were divided into control placebo, streptozotocin-diabetic rat (STZ) groups supplemented or not with ?-GOS (20 mg/kg/day) for 8 weeks and/or following endurance training. The training program was individualized and consisted in a 1h/day, 5days/week running during 8 weeks on a motor-driven treadmill. At the end of the protocol, blood was obtained by venous puncture into heparin-containing tubes for further analyses (glucose, insulin, fructosamine and immune responses) Results: Relative to the control group, STZ rats exhibited hyperglycemia, insulin deficiency and a trend to higher plasma fructosamine levels, a marker of glycated proteins. They also exhibited a decrease in T and B cells and an increase in natural killers (NK). ?-GOS treatment reduced plasma fructosamine levels and increased B cells compared to STZ rats. Training induced a decrease in plasma glucose, T cells and an increase in B cells in STZ rats. The combined effect of ?-GOS and training didn’t potentiate the immune response on B and T cells but inhibited the effects of training on NK. Discussion: Our results suggest that training and ?-GOS alter positively plasma glucose and/or fructosamine and the immune response. But the effects of combined treatments only concern limited parameters. ? -GOS effects could be partly attributable to its immunomodulating activity. Keywords: ?-GOS, training, immune cells, diabetes. References Efstathiou, T. and D. Fathi. Sojasun Technologies. 2010 Boucher J et al. J Physiol Biochem. 59(3):169-73, 2003
18th Annual Congress of the European College of Sport Sciences, Barcelone, Spain, 26-29 juin.
Barcelone, Spain

hal-01159378
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01159378

Éditeur(s) : HAL CCSD
Résumé : Predicting, modelling and analysing the metabolism of xenobiotics, foreign substances to an organism, using computer methods, has been a major challenge for the scientific community for many years. This thesis aims to implement multiscale computing methods for predicting and analyzing the metabolism of xenobiotics. A first focus of this study was on the construction and de novo automatic annotation of metabolic graphs combining high sensitivity and precision. These graphs thus provide the prediction of the metabolism of xenobiotics in humans, as well as the genotoxicity of the molecules and atoms that make up xenobiotics. Then, the work focused on the implementation of a dynamic mathematical model modelling enzymatic competition effects through the development of a methodology allowing the exploitation of limited biological data while limiting inherent biases.
Prédire, modéliser et analyser le métabolisme de xénobiotiques, substances étrangères à un organisme, à l’aide de méthodes informatiques est un challenge majeur mobilisant la communauté scientifique depuis de nombreuses années. Cette thèse vise à implémenter des méthodes informatiques multi-échelles pour prédire et analyser le métabolisme des xénobiotiques. Un premier axe de cette étude portait sur la construction et l’annotation automatique de novo de graphes métaboliques combinant fortes sensibilités et précisions. Ces graphes fournissent ainsi la prédiction du métabolisme de xénobiotiques chez l’homme, ainsi que la génotoxicité des molécules et atomes qui le composent. Puis, le travail s’est orienté sur l’implémentation d’un modèle mathématique dynamique modélisant des effets de compétition enzymatique à travers le développement d’une méthodologie permettant l’exploitation de données biologiques restreintes tout en limitant les biais inhérents.
https://hal-univ-rennes1.archives-ouvertes.fr/tel-01659375

tel-01659375
https://hal-univ-rennes1.archives-ouvertes.fr/tel-01659375
https://hal-univ-rennes1.archives-ouvertes.fr/tel-01659375/document
https://hal-univ-rennes1.archives-ouvertes.fr/tel-01659375/file/these.pdf

Éditeur(s) : HAL CCSD Instituto Oswaldo Cruz, Ministério da Saúde
Résumé : International audience
A cross section of a human population (501 individuals) selected at random, and living in a Bolivian community, highly endemic for Chagas disease, was investigated combining together clinical, parasitological and molecular approaches. Conventional serology and polymerase chain reaction (PCR) indicated an active transmission of the infection, a high seroprevalence (43.3%) ranging from around 12% in < 5 years to 94.7% in > 45 years, and a high sensitivity (83.8%) and specificity of PCR. Abnormal ECG tracing was predominant in chagasic patients and was already present among individuals younger than 13 years. SAPA (shed acute phase antigen) recombinant protein and the synthetic peptide R-13 were used as antigens in ELISA tests. The reactivity of SAPA was strongly associated to Trypanosoma cruzi infection and independent of the age of the patients but was not suitable neither for universal serodiagnosis nor for discrimination of specific phases of Chagas infection. Anti-R-13 response was observed in 27.5% only in chagasic patients. Moreover, anti-R13 reactivity was associated with early infection and not to cardiac pathology. This result questioned previous studies, which considered the anti-R-13 response as a marker of chronic Chagas heart disease. The major clonets 20 and 39 (belonging to Trypanosoma cruzi I and T. cruzi II respectively) which circulate in equal proportions in vectors of the studied area, were identified in patients' blood by PCR. Clonet 39 was selected over clonet 20 in the circulation whatever the age of the patient. The only factor related to strain detected in patients' blood, was the anti-R-13 reactivity: 37% of the patients infected by clonet 39 (94 cases) had anti-R13 antibodies contrasting with only 6% of the patients without clonet 39 (16 cases).
ISSN: 0074-0276

hal-01256421
https://hal.archives-ouvertes.fr/hal-01256421
DOI : 10.1590/S0074-02762002000300002
IRD : fdi:010029219
PUBMED : 12048553

Résumé : The necessity of improving knowledge in fisheries and especially small-scale coastal fisheries in order to analyse the conditions for their sustainable development is increasingly recognized. The three main requirements for the sustainable development of fisheries are the simultaneous present and future well being of the bio-ecological system, the human system and the management process. Knowledge on these aspects of small-scale coastal fisheries (SSCF) in Europe is generally limited, although there has been an improvement in information on the fishing sector and inshore marine resources due to the EU Data Collection Regulations (DCR) 1. SSCF are strongly represented in all EU Member States (81% and 87% of the EU 25 whole fleet is composed of vessels less than 12 and 15 meters respectively)2 and approximately 100,000 crew are involved in SSCF in Europe. SSCF are present all around the European coast, even in isolated and sensitive areas.

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/2007/rapport-6348.pdf
http://archimer.ifremer.fr/doc/00141/25204/23312.pdf
http://archimer.ifremer.fr/doc/00000/6348/