Extrait de : La Montagne Pelée et l'effroyable destruction de Saint-Pierre (Martinique) le 08 mai 1902. Le brusque réveil du volcan en 1929 (En regard de la page 169)
Résumé : Cliché
Siècle(s) traité(s) : 20
Droits : Domaine public
Permalien : http://www.manioc.org/images/PAP110550233i1
PAP110550233i1

Extrait de : La Montagne Pelée et l'effroyable destruction de Saint-Pierre (Martinique) le 08 mai 1902. Le brusque réveil du volcan en 1929 (En regard de la page 121)
Résumé : Cliché
Siècle(s) traité(s) : 20
Droits : Domaine public
Permalien : http://www.manioc.org/images/PAP110550172i2
PAP110550172i2

Extrait de : France pittoresque ou Description pittoresque, topographique et statistique des départements et colonies de la France... avec des notes sur les langues, idiomes et patois... et des renseignements statistiques... accompagnée de la statistique générale de la France… T.3 (entre p. 172 et p. 173)
Siècle(s) traité(s) : 19
Droits : Domaine public
Permalien : http://www.manioc.org/images/SCH131900343i1
SCH131900343i1

Éditeur(s) : HAL CCSD
Résumé : The field campaign on the Sète coast deployed during the winter 2009 was used to understand the hydrodynamics on a double barred beach in the surf zone during storm periods. The large set of measurements collected at several position and depth were also useful to improve the 3D circulation model Symphonie that takes into account the atmospherics and wave forcings. Once implemented on the beach and supplemented with some additional parameterizations concerning the roller effects and the bottom friction, the model was tuned and validated in the surf zone. The role of the different processes was then analysed. Thus, the roller and the bottom friction are of primary importance in the dynamics of the circulation. Thanks to its 3D nature and once associated with a sediment transport model and a morphodynamic model, Symphonie will offer a good representation of the sediment transport.
Coastal Dynamics 2013
Arcachon, France

hal-00855035
https://hal.archives-ouvertes.fr/hal-00855035

Éditeur(s) : HAL CCSD Editions Paralia CFL
Résumé : L'hydrodynamique du plateau continental du Golfe du Lion est généralement induite par les vents. Les simulations numériques réalisées par les modèles numériques de circulation océanique côtière aux équations primitives sont en général cohérentes avec les observations in-situ. Très peu d'observations étaient toutefois disponibles pendant les épisodes de tempêtes méditerranéennes. Aussi, la station BESSète (Bottom Experimental Station Sète), équipée d'un ADCP mesurant en continu les caractéristiques de houle et les profils verticaux de courants, a été implantée sur le plateau sous 70 m. Les premières données issues de cette station, acquises en février-mars 2007, confirment les schémas de circulations induits par les vents de Nord (Mistral,Tramontane). Un épisode de tempête (Hs>5m) a aussi pu être observé le 18 février 2007. De forts courants dont l'intensité peut atteindre 0,7 ms-1 y sont associés. Cette série de données est ensuite utilisée pour calculer les tensions decisaillements induites sur le fond. Sous 70 m, elles sont en général quasi-nulles excepté pendant l'épisode de tempête où l'action conjuguée des houles et des courants peut induire des contraintes susceptibles de mobiliser et déplacer le sédiment fin présent dans la zone. La très forte intensité des courants mesurés pendant la tempête amènent ensuite à reconsidérer les processus de transferts de quantité de mouvement entre atmosphère, océan et sédiments. Très schématiquement, sur le plateau, dès que la houle interagit avec le fond, la houle se transforme (réfraction, dissipation) et transmettrait de la quantité de mouvement à l'échelle des courants moyens. Cette hypothèse est retenue pour expliquer ces forts courants observés et pourrait être confirmée par d'autres travaux théoriques et numériques.
ISSN: 1760-8716

hal-00854000
https://hal.archives-ouvertes.fr/hal-00854000
DOI : 10.5150/jngcgc.2008.011-L

Éditeur(s) : HAL CCSD Royal Society, The
Résumé : International audience
Many studies have focused on the impacts of climate change on biological assemblages, yet little is known about how climate interacts with other major anthropogenic influences on biodiversity, such as habitat disturbance. Using a unique global database of 1128 local ant assemblages , we examined whether climate mediates the effects of habitat disturbance on assemblage structure at a global scale. Species richness and evenness were associated positively with temperature, and negatively with disturbance. However, the interaction among temperature, precipitation and disturbance shaped species richness and evenness. The effect was manifested through a failure of species richness to increase substantially with temperature in transformed habitats at low precipitation. At low precipitation levels, evenness increased with temperature in undisturbed sites, peaked at medium temperatures in disturbed sites and remained low in transformed sites. In warmer climates with lower rainfall, the effects of increasing disturbance on species richness and evenness were akin to decreases in temperature of up to 98C. Anthropogenic disturbance and ongoing climate change may interact in complicated ways to shape the structure of assemblages, with hot, arid environments likely to be at greatest risk.
ISSN: 0962-8452

hal-01323255
https://hal.archives-ouvertes.fr/hal-01323255
DOI : 10.1098/rspb.2015.0418

Éditeur(s) : HAL CCSD Public Library of Science
Résumé : International audience
The scleractinian coral Pocillopora damicornis type β is known to present a mixed reproduction mode: through sexual reproduction, new genotypes are created, while asexual reproduction insures their propagation. In order to investigate the relative proportion of each reproduction mode in P. damicornis type β populations from Reunion Island, Indian Ocean, clonal propagation along the west coast was assessed through four sampling sites with increasing geographical distance between sites. Coral colonies were sampled either exhaustively, randomly or haphazardly within each site, and genotypic diversity was assessed using 13 microsatellite loci over a total of 510 P. damicornis type β determined a posteriori from their mtDNA haplotype (a 840 bp sequenced fragment of the Open Reading Frame). Overall, 47% of all the sampled colonies presented the same multi-locus genotype (MLG), a superclone, suggesting that asexual propagation is extremely important in Reunion Island. Within each site, numerous MLGs were shared by several colonies, suggesting local clonal propagation through fragmentation. Moreover, some of these MLGs were found to be shared among several sites located 40 km apart. While asexual reproduction by fragmentation seems unlikely over long distances, our results suggest a production of parthenogenetic larvae. Despite shared MLGs, two differentiated clusters were enclosed among populations of the west coast of Reunion Island, revealing the necessity to set up appropriate managing strategies at a local scale.
ISSN: 1932-6203

hal-01450078
http://hal.univ-reunion.fr/hal-01450078
DOI : 10.1371/journal.pone.0169692

Éditeur(s) : HAL CCSD
Résumé : The sandy coasts of Languedoc-Roussillon are a zone vulnerable to erosion and flooding. These hazards are generally associated with a combination of natural factors such as waves, wind, rising sea levels and the importance of sediment supply, and are therefore worsened during storms. For the management of such risks, a better knowledge of the hydrodynamic phenomena occuring from the surf zone through to the coastal scale is essential. This need led to the development of a numerical modelling platform consisting of the 3D ocean circulation model Symphonie, usually dedicated to regional and coastal scales, which was modified to include the wave forcing, modeled by the WaveWatch III or Swan models. Using this platform the entire littoral and coastal regions can be accurately represented. The model was tested in several academic cases. Measurements on the barred beach of Sète during the winter of 2008-2009 served to refine the model, which is able to successfully reproduce the characteristics of the currents in coastal areas, drifts or rip currents over more complex bathymetries and also the vertical profiles of currents. To validate the model on the inner-shelf, we compared the simulations with measurements taken during a winter storm in 2004 around the mouth of the Têt river, as well as during storms in 2007 and 2008 in the Gulf of Aigues-Mortes. Currents are generally well reproduced. However, the scope of wave action seems limited to a depth of 30m. The characteristics of our model allow a good reproduction of the currents at all scales and the 3D nature of the model permits a more precise calculation of the shear stress and bottom current responsible, respectively, for the suspension and advection of sediments.
Le littoral sableux du Languedoc-Roussillon est un système vulnérable aux risques d'érosion et de submersion. Ces aléas sont liés à la conjonction des facteurs naturels que sont les vagues, vent, élévation du niveau de la mer et apports sédimentaires et sont donc aggravés en période de tempête. En vue d'une gestion des risques, une meilleure connaissance des phénomènes hydrodynamiques de l'échelle littorale à l'échelle côtière est essentielle. Ce travail a conduit à la réalisation d'une plateforme de modélisation numérique composée du modèle de circulation océanique 3D Symphonie, traditionnellement dédié aux échelles régionales et côtières, qui a été modifié pour inclure le forçage par les vagues, modélisées par les modèles Wavewatch III ou Swan, et ainsi étendre sa validité au littoral. Le modèle a été testé sur des cas académiques littoraux. Des mesures sur la plage à double barres de Sète pendant l'hiver 2008-2009, ont également servi à parfaire le modèle qui reproduit ainsi avec succès les caractéristiques des courants en zone littorale : la dérive, les courants sagittaux sur des bathymétries plus complexes et les profils verticaux des courants. Pour valider le modèle à des échelles plus côtières, nous avons confronté ses résultats à des mesures réalisées pendant une tempête hivernale en 2004 aux alentours de l'embouchure de la Têt, mais également sur des tempêtes de 2007 et 2008 dans le Golfe d'Aigues-Mortes. Les courants sont globalement bien reproduits. Les zones d'action des vagues semblent limitées aux zones de profondeur inférieure à 30 m. Notre modèle autorise une reproduction correcte des courants à toutes les échelles et sa nature 3D permet un calcul plus précis de la tension de cisaillement de fond et du courant près du fond, responsables respectivement de la mise en suspension et de l'advection des sédiments.
https://tel.archives-ouvertes.fr/tel-00680405

tel-00680405
https://tel.archives-ouvertes.fr/tel-00680405
https://tel.archives-ouvertes.fr/tel-00680405v2/document
https://tel.archives-ouvertes.fr/tel-00680405/file/2011_MICHAUD.pdf

Éditeur(s) : HAL CCSD
Résumé : International audience
After defining the High Performance Pre- Computing --referred as HPPC-- concept, the aim of the present study is to develop a prototype whether to approve or not the benefits of this concept. Our application case tries to answer the geophysical issue of coastal flooding. This is an example of an alert system based on the HPPC architecture, thus on pre-computed scenarios. The prototype provides the scientists with an ergonomic and on-demand tool allowing the run of scenarios of any implemented numerical models. These runs are available through a web application which submits the corresponding jobs on the remote french public cluster of HPC@LR. In this study we simulate the waves propagation over a Mediterranean grid using the wave model WaveWatch III⃝R . A reference simulation using usual conditions is approximated using the k-NN algorithm over 12, 98 and then 980 pre-computed scenarios. This simple experiment demonstrates how useful the pre-computing of scenarios is for alert systems as far as enough and relevant scenarios are pre-computed. This is the reason why searches continue in each critical points of the HPPC architecture such as the design of experiment, the approximation of the results by meta-models and the research of the closest scenarios in this big data context.
4th International Conference on Knowledge and Systems Engineering
Danang, Vietnam

lirmm-00736797
https://hal-lirmm.ccsd.cnrs.fr/lirmm-00736797
https://hal-lirmm.ccsd.cnrs.fr/lirmm-00736797/document
https://hal-lirmm.ccsd.cnrs.fr/lirmm-00736797/file/PID2396685.pdf
DOI : 10.1109/KSE.2012.36

Éditeur(s) : HAL CCSD Elsevier Masson
Résumé : While oceanic circulation in the Gulf of Lion (GoL) has often been studied in calm weather or with northerly winds (Tramontane or Mistral) through observations and numerical circulation models, few studies have focused on southeasterly storm events. Yet, correct representation of the circulation during storms is crucial if the suspension of sediments is to be correctly modelled throughout the Gulf. The purpose of this paper is to describe the hydrodynamics in the Gulf of Aigues-Mortes (NW of the GoL) during the storm of 18 February 2007 by using a set of data from an ADCP station placed at a depth of 65 m on the sea bed off the coast at Sète, supplemented by the ocean circulation model SYMPHONIE. This storm was characterized by a moderate south-easterly wind (15 m . s−1) and waves of up to 5 m of significant height at its apex. At the ADCP, strong currents of up to 0.8 m . s−1 near the surface and 0.5 m . s−1 near the bottom were recorded, parallel to the coast, flowing towards the south-west. The simulated currents were widely underestimated, even taking the effect of waves into account in the model. It was suspected that the representation of the wind in the atmospheric model was an underestimation. A new simulation was therefore run with an arbitrarily chosen stronger wind and its results were in much better agreement with the measurements. A simplified theoretical analysis successfully isolated the wind-induced processes, responsible for the strong currents measured during the apex and the strong vertical shear that occurred at the beginning of the storm. These processes were: 1/ the barotropic geostrophic current induced by a wind parallel to the coast and 2/ the Ekman spiral. The duration of the storm (about 36 h at the apex) explains the continuous increase of the current as predicted by the theory. The frictionally induced Ekman transport explains the current shear in the surface layer in the rising stage of the storm, and the addition of high waves and strong wind at the apex is more in favour of strong vertical mixing in the surface layer.
ISSN: 1631-0713

hal-00908200
https://hal.archives-ouvertes.fr/hal-00908200
DOI : 10.1016/j.crte.2013.07.001

Éditeur(s) : HAL CCSD PeerJ
Résumé : International audience
The adaptative bleaching hypothesis (ABH) states that, depending on the symbiotic flexibility of coral hosts (i.e., the ability of corals to ''switch'' or ''shuffle'' their algal symbionts), coral bleaching can lead to a change in the composition of their associated Symbiodinium community and, thus, contribute to the coral's overall survival. In order to determine the flexibility of corals, molecular tools are required to provide accurate species delineations and to detect low levels of coral-associated Symbiodinium. Here, we used highly sensitive quantitative (real-time) PCR (qPCR) technology to analyse five common coral species from Moorea (French Polynesia), previously screened using only traditional molecular methods, to assess the presence of low-abundance (background) Symbiodinium spp. Similar to other studies, each coral species exhibited a strong specificity to a particular clade, irrespective of the environment. In addition, however, each of the five species harboured at least one additional Symbiodinium clade, among clades A–D, at background levels. Unexpectedly, and for the first time in French Polynesia, clade B was detected as a coral symbiont. These results increase the number of known coral-Symbiodinium associations from corals found in French Polynesia, and likely indicate an underestimation of the ability of the corals in this region to associate with and/or ''shuffle'' different Symbiodinium clades. Altogether our data suggest that corals from French Polynesia may favor a trade-off between optimizing symbioses with a specific Symbiodinium clade(s), maintaining associations with particular background clades that may play a role in the ability of corals to respond to environmental change. How to cite this article Rouzé et al. (2017), An updated assessment of Symbiodinium spp. that associate with common scleractinian corals from Moorea (French Polynesia) reveals high diversity among background symbionts and a novel finding of clade B.
ISSN: 2167-8359

Droits : info:eu-repo/semantics/OpenAccess
hal-01430294
https://hal-sde.archives-ouvertes.fr/hal-01430294
https://hal-sde.archives-ouvertes.fr/hal-01430294/document
https://hal-sde.archives-ouvertes.fr/hal-01430294/file/Rouze-2017-PeerJ-Updated.pdf
DOI : 10.7717/peerj.2856

Éditeur(s) : HAL CCSD Wiley Open Access
Résumé : International audience
Coral disease outbreaks have increased over the last three decades, but their causal agents remain mostly unclear (e.g., bacteria, viruses, fungi, protists). This study details a 14-month-long survey of coral colonies in which observations of the development of disease was observed in nearly half of the sampled colonies. A bimonthly qPCR method was used to quantitatively and qualitatively evaluate Symbiodinium assemblages of tagged colonies, and to detect the presence of Vibrio spp. Firstly, our data showed that predisposition to disease development in general, and, more specifically, infection by Vibrio spp. in Acropora cytherea depended on which clades of Symbiodinium were harbored. In both cases, harboring clade D rather than A was beneficial to the coral host. Secondly, the detection of Vibrio spp. in only colonies that developed disease strongly suggests opportunistic traits of the bacteria. Finally, even if sporadic cases of switching and probably shuffling were observed, this long-term survey does not suggest specific-clade recruitment in response to stressors. Altogether, our results demonstrate that the fitness of the coral holobiont depends on its initial consortium of Symbiodinium, which is distinct among colonies, rather than a temporary adaptation achieved through acquiring different Symbiodinium clades.
ISSN: 2045-7758

hal-01346931
https://hal-uvsq.archives-ouvertes.fr/hal-01346931
https://hal-uvsq.archives-ouvertes.fr/hal-01346931/document
https://hal-uvsq.archives-ouvertes.fr/hal-01346931/file/2016%20Rouze%20EcolEvol.pdf
DOI : 10.1002/ece3.1895

Éditeur(s) : HAL CCSD European Geosciences Union
Résumé : International audience
We develop and implement a new method to take into account the impact of waves into the 3-D circulation model SYMPHONIE (Marsaleix et al., 2008, 2009a), following the simplified equations of Bennis et al. (2011) which use glm2z-RANS theory (Ardhuin et al., 2008b). These adiabatic equations are completed by additional parameterizations of wave breaking, bottom friction and wave-enhanced vertical mixing, making the forcing valid from the surf zone through to the open ocean. The wave forcing is performed by wave generation and propagation models WAVEWATCH III® (Tolman, 2008, 2009; Ardhuin et al., 2010) and SWAN (Booij et al., 1999). The model is tested and compared with other models for a plane beach test case, previously tested by Haas and Warner (2009) and Uchiyama et al. (2010). A comparison is also made with the laboratory measurements of Haller et al. (2002) of a barred beach with channels. Results fit with previous simulations performed by other models and with available observational data. Finally, a realistic case of energetic waves travelling over a coast of the Gulf of Lion (in the northwest of the Mediterranean Sea) for which currents are available at different depths as well as an accurate bathymetric database of the 0-10 m depth range, is then simulated. A grid nesting approach is used to account for the different forcings acting at different spatial scales. The simulation coupling the effects of waves and currents is successful to reproduce the powerful northward littoral drift in the 0-15 m depth zone. More precisely, two distinct cases are identified: when waves have a normal angle of incidence with the coast, they are responsible for complex circulation cells and rip currents in the surf zone, and when they travel obliquely, they generate a northward littoral drift. These features are more complicated than in the test cases, due to the complex bathymetry and the consideration of wind and non-stationary processes. Wave impacts in the inner shelf are less visible since wind and regional circulation seem to be the predominant forcings. Besides, a discrepancy between model and observations is noted at that scale, possibly linked to an underestimation of the wind stress. Lastly, this three-dimensional method allows a good representation of vertical current profiles and permits to calculate the shear stress associated with wave and current. Future work will focus on the combination with a sediment transport model.
ISSN: 1812-0806

hal-00766548
https://hal.archives-ouvertes.fr/hal-00766548
https://hal.archives-ouvertes.fr/hal-00766548/document
https://hal.archives-ouvertes.fr/hal-00766548/file/os-8-657-2012.pdf
DOI : 10.5194/osd-8-2417-2011

Éditeur(s) : HAL CCSD
Résumé : International audience
In the analysis of coastal hazards, the features of extreme waves are determining information to question the impact of storms to the coast. The spatial behaviour of extreme waves is even more valuable especially since it is sparsely provided. Regarding recent applications in other contexts, a kind of statistical models called max-stable processes is relevant for modelling spatial extreme events. Max-stable processes are extensions of the well-known Generalised Extreme Value (GEV) distribution. Unlike univariate approaches, max-stable processes consider spatial dependence of a phenomenon. Such a modelling also overtakes a standard multivariate approach by providing information continuously over the area studied, even where no observation is available. Relying on such a stochastic modelling, the aim of this study is to discuss the extreme waves hazards in the Gulf of Lions, focusing on their spatial behaviour.
34th Conference on Coastal Engineering
Seoul, South Korea

lirmm-01382568
https://hal-lirmm.ccsd.cnrs.fr/lirmm-01382568
https://hal-lirmm.ccsd.cnrs.fr/lirmm-01382568/document
https://hal-lirmm.ccsd.cnrs.fr/lirmm-01382568/file/7553-31212-1-PB.pdf
DOI : 10.9753/icce.v34.management.17

Éditeur(s) : HAL CCSD Wiley Open Access
Résumé : International audience
Coral disease outbreaks have increased over the last three decades, but their causal agents remain mostly unclear (e.g., bacteria, viruses, fungi, protists). This study details a 14-month-long survey of coral colonies in which observations of the development of disease was observed in nearly half of the sampled colonies. A bimonthly qPCR method was used to quantitatively and qualitatively evaluate Symbiodinium assemblages of tagged colonies, and to detect the presence of Vibrio spp. Firstly, our data showed that predisposition to disease development in general, and, more specifically, infection by Vibrio spp. in Acropora cytherea depended on which clades of Symbiodinium were harbored. In both cases, harboring clade D rather than A was beneficial to the coral host. Secondly, the detection of Vibrio spp. in only colonies that developed disease strongly suggests opportunistic traits of the bacteria. Finally, even if sporadic cases of switching and probably shuffling were observed, this long-term survey does not suggest specific-clade recruitment in response to stressors. Altogether, our results demonstrate that the fitness of the coral holobiont depends on its initial consortium of Symbiodinium, which is distinct among colonies, rather than a temporary adaptation achieved through acquiring different Symbiodinium clades.
ISSN: 2045-7758

hal-01270779
https://hal-univ-perp.archives-ouvertes.fr/hal-01270779
https://hal-univ-perp.archives-ouvertes.fr/hal-01270779/document
https://hal-univ-perp.archives-ouvertes.fr/hal-01270779/file/41080.pdf
DOI : 10.1002/ece3.1895

Éditeur(s) : HAL CCSD
Résumé : In the bay of Aigues-Mortes, the managers of the co astal cities try to preserve the socio-economic and patrimonial stakes against the coastal hazards, such as contamination, storm surge and erosion. In this context, a massive beach nourishment of sand (1 million of m3 for 10km of coastline) was made at the beginning of year 2008 to reduce erosion. The REPBAM project (REchargements et Panaches sédiment aires dans la Baie d'Aigues-Mortes) aims to qualify and quantify by in-situ measurements and numerical modelling: 1. the geomorphological evolution of this modified coast and 2. the impact of the sediment's resuspension on the coastal ecosystems, in particular the one of the Posidonia oceanica seagrass. A numerical modelling "wave/current/sediment" is first implemented for December 2008. Nested and curvilinear grids allow a very high resolution for the beach area but also include the inner shelf where the seagrasses are located. Hydrodynamic and topo-bathymetric measurements were acquired from January to May 2012. Model and measurements results show the same trends during storms: strong currents, seaward migrationof the innerbar, sediment resuspension and turbid on the inner shelf.
Coastal Dynamics 2013
Arcachon, France

hal-00908082
https://hal.archives-ouvertes.fr/hal-00908082