Éditeur(s) : HAL CCSD Springer Verlag/EDP Sciences
Résumé : Le développement de modèles de dynamique forestière adaptés aux forêts tropicales humides est compliqué par la très grande diversité spécifique caractérisant ces forêts. Les modélisateurs ont souvent eu recours, pour simplifier le problème, à des techniques de regroupement d'espèces. Il existe des méthodes diverses de regroupement, qui relèvent de trois grands types de stratégie : (i) stratégie écologique subjective, (ii) stratégie écologique basée sur l'analyse de données, (iii) stratégie des processus de dynamique populationnelle. Dans le cadre des deux premières stratégies, une espèce est affectée à un groupe et un seul alors que dans le cadre de la troisième, des groupes d'espèces sont définis pour chacun des processus de dynamique (recrutement, croissance, mortalité) pris séparément, et chaque espèce est affectée à trois groupes. Dans la littérature, on trouve peu d'exemples de congruence ou de convergence entre les groupes définis par ces différentes méthodes. Ceci peut être expliqué par l'indépendance existant entre les caractères utilisés pour fabriquer tel ou tel groupe, ou encore par la grande variabilité intra-spécifique de ces caractères. Nous argumentons et concluons sur le fait que le recours à la stratégie des processus de dynamique paraît être la meilleure pour construire des groupes d'espèces adaptés à la prédiction de la dynamique des forêts tropicales.
ISSN: 1286-4560

hal-01032060
https://hal.archives-ouvertes.fr/hal-01032060
DOI : 10.1051/forest:2005084

Éditeur(s) : HAL CCSD Springer Verlag/EDP Sciences
Résumé : absent
ISSN: 1286-4560

hal-01032265
https://hal.archives-ouvertes.fr/hal-01032265
DOI : 10.1051/forest:2005048

Éditeur(s) : HAL CCSD INRA/EDP Sciences
Résumé : Deux espèces de la forêt de basse altitude d'Amérique tropicale (Antilles), Tabebebuia heterophylla (poirier-pays) et Hymenaea courbaril (courbaril), se révèlent intéressantes pour le reboisement des régions les moins arrosées. Le comportement de ces espèces vis-à-vis de la sécheresse est étudié grâce à un traitement sous forme d'arrosage différencié appliqué à des jeunes plants âgés de 1 an, en pépinière. L'évolution de l'état hydrique des plants est suivie au cours de 6 mois d'expérience à l'aide de la bombe à pression. Les valeurs caractéristiques du potentiel hydrique, du potentiel de base (Pb) et du potentiel minimum (Pm), sont étudiées. La cinétique journalière du potentiel de base indique que le poirier-pays se comporte comme une espèce plus économe de son eau que le courbaril. Toutefois, le meilleur enracinement du poirier-pays provoque un rapide dessèchement du sol. Ceci se traduit par une chute plus précoce du potentiel de base de cette espèce dans les lots moins arrosés (arrosage 1 fois par semaine). Durant la phase de dessèchement, l'évolution de la différence Pm-Pb indique une fermeture stomatique maximale pour un potentiel de base plus élevé pour le poirier-pays (-25 bars) que pour le courbaril (-32 bars). Les résultats obtenus dans les mesures d'élongation des axes montrent que l'arrêt de croissance pour les deux espèces se produit pour des valeurs élevées de Pb voisines de - 6 bars pour le poirier-pays et - 7 bars pour le courbaril. Dans les deux cas, seule la fréquence de 1 arrosage hebdomadaire réduit de façon notable la formation de matière sèche et la croissance chez les plants.
ISSN: 0003-4312

hal-01032356
https://hal.archives-ouvertes.fr/hal-01032356

Éditeur(s) : HAL CCSD INRA/EDP Sciences
Résumé : absent
ISSN: 0003-4312

hal-01032372
https://hal.archives-ouvertes.fr/hal-01032372

Éditeur(s) : HAL CCSD INRA/EDP Sciences
Résumé : 31 ref.
absent
ISSN: 0003-4312

hal-01032358
https://hal.archives-ouvertes.fr/hal-01032358

Éditeur(s) : HAL CCSD Springer Verlag/EDP Sciences
Résumé : International audience
In the dense tropical rainforest understorey, saplings exhibit different growth strategies aiming at reaching light levels better fitting their ecology. Investing mainly in height growth, at the expense of their width, a lot are close to mechanical instability. Tachigali melinonii, a long living heliophilic tree species, is frequently observed to be extremely slender and supported by neighbours. Such observations suggest an active growth control through the perception of mechanical environment. * Mechanical environment or light availability, which one is the most influent on growth and slenderness (H/D)? To test this question, we recorded growth of control and staked saplings of two species with contrasting habits and ecology: T. melinonii, and Dicorynia guianensis, along a natural light gradient. * Dicorynia, the more stable, responded more clearly to the staking treatment, showing slenderness increase when light is available, whereas for Tachigali, only light availability governed growth. * For Tachigali, growth allocation is mainly governed by light availability and ontogeny, whereas Dicorynia is probably similar to the average tree strategy, using the thigmomorphogenetic physiological process to control its stability.
ISSN: 1286-4560

hal-00534019
https://hal.archives-ouvertes.fr/hal-00534019
DOI : 10.1051/forest/2009104

Éditeur(s) : HAL CCSD INRA/EDP Sciences
Résumé : 41 ref.
absent
ISSN: 0003-4312

hal-01032361
https://hal.archives-ouvertes.fr/hal-01032361

Éditeur(s) : HAL CCSD Springer Verlag/EDP Sciences
Résumé : International audience
Context : Functional - structural models (FSM) of tree growth have great potential in forestry, but their development, calibration and validation are hampered by the difficulty of collecting experimental data at organ scale for adult trees. Due to their simple architecture and morphological properties, " model plants " such as Cecropia sciadophylla are of great interest to validate new models and methodologies, since exhaustive descriptions of their plant structure and mass partitioning can be gathered. * Aims : Our objective was to develop a model-based approach to analysing the influence of environmental conditions on the dynamics of trophic competition within C. sciadophylla trees. * Methods : We defined an integrated environmental factor that includes meteorological medium-frequency variations and a relative index representing the local site conditions for each plant. This index is estimated based on model inversion of the GreenLab FSM using data from 11 trees for model calibration and 7 trees for model evaluation. * Results : The resulting model explained the dynamics of biomass allocation to different organs during the plant growth, according to the environmental pressure they experienced. * Perspectives : By linking the integrated environmental factor to a competition index, an extension of the model to the population level could be considered.
ISSN: 1286-4560

hal-00780347
https://hal-ecp.archives-ouvertes.fr/hal-00780347
https://hal-ecp.archives-ouvertes.fr/hal-00780347/document
https://hal-ecp.archives-ouvertes.fr/hal-00780347/file/Letort2011AFS.pdf
DOI : 10.1007/s13595-011-0131-x

Éditeur(s) : HAL CCSD Springer Verlag/EDP Sciences
Résumé :  
absent
ISSN: 1286-4560

hal-01032143
https://hal.archives-ouvertes.fr/hal-01032143
DOI : 10.1051/forest:2008061

Éditeur(s) : HAL CCSD Springer Verlag/EDP Sciences
Résumé : International audience
We present a plant trait database covering autecology for rain forest trees of French Guiana. The database comprises more than thirty traits including autecology (e.g., habitat associations and reproductive phenology), wood structure (e.g., density and tension characteristics) and physiology at the whole plant (e.g., carbon and nitrogen isotopes) and leaf level (e.g., specific leaf area, photosynthetic capacity). The current database describes traits for about nine hundred species from three hundred genera in one hundred families. For more than sixty species, data on twelve morphological and ecophysiological traits are provided for individual plants under different environmental conditions and at different ontogenetic stages. The database is thus unique in permitting intraspecific analyses, such as the effects of ontogenetic stages or environmental conditions on trait values and their relationships.
ISSN: 1286-4560

Droits : info:eu-repo/semantics/OpenAccess
hal-00884130
https://hal.archives-ouvertes.fr/hal-00884130
https://hal.archives-ouvertes.fr/hal-00884130/document
https://hal.archives-ouvertes.fr/hal-00884130/file/hal-00884130.pdf

Éditeur(s) : HAL CCSD Springer Verlag/EDP Sciences
Résumé : International audience
Context: Woodcutting is a very old technology but scientific research is scarce on the subject. In the last 50 years much work on basic mechanisms as well as industrial processes has been done in France. Aims: The specific nature of wood introduces strong differences between wood and metal cutting processes. The paper focuses on French teams' contributions. Results: The basic aspects of the tool–material interaction for different basic modes in woodcutting are highlighted. In primary conversion such as sawing, veneer cutting or green wood chipping, huge progress comes from automation and the possibility of linking the process to log and product quality through new sensors. In secondary processing much has been done on the links between the cutting process, surface qualification and the properties of these surfaces for further processing, such as gluing or coating. Tool wear depends on the cutting process, timber quality, and species. Trade-offs are required in tool technology and coating technologies may improve tool life. Conclusion: A large amount of knowledge and innovation has come from 50 years of worldwide research effort, with France being particularly active in this period. The transfer of skills from metals cutting industry was often a key, but much is needed to move closer to both metal cutting sector and woodcutting skills among craftsmen.
ISSN: 1286-4560

hal-01135156
https://hal.archives-ouvertes.fr/hal-01135156
https://hal.archives-ouvertes.fr/hal-01135156/document
https://hal.archives-ouvertes.fr/hal-01135156/file/Wood_machining_focus_French_research_Thibaut_al_2015.pdf
DOI : 10.1007/s13595-015-0460-2

Éditeur(s) : HAL CCSD INRA/EDP Sciences
Résumé : 3 ref.
Des relevés de terrain ont été effectués afin d'étudier la phénologie d'une espèce des forêts de basse altitude des Antilles : le Tabebuia heterophylla. Parallèlement un stockage à basse température a pu étendre à huit mois la longévité des graines. Une technique simple de bouturage est mise au point.
ISSN: 0003-4312

hal-01032289
https://hal.archives-ouvertes.fr/hal-01032289

Éditeur(s) : HAL CCSD Springer Verlag/EDP Sciences
Résumé : International audience
Context and aim : This study aimed to examine the effect of the tension wood G‐layer on the viscoelastic properties of wood. Methods : Tension wood and opposite wood samples were obtained from six French Guianese tropical rainforest species (Sextonia rubra, Ocotea guyanensis, Inga alba, Tachigali melinoni, Iyranthera sagotiana and Virola michelii); the tension wood of the former three of these species had a Glayer, whilst the tension wood from the latter three had no Glayer. Tensile dynamic mechanical analysis (DMA) was performed on green never dried wood samples in the longitudinal direction with samples submerged in a water bath at a temperature (30°C) and frequency (1 Hz) representative of the conditions experienced by wood within a living tree. Then, DMA was repeated with samples conditioned to an air-dried state. Finally, samples were oven-dried to measure longitudinal shrinkage. Results : Tension wood did not always have a higher longitudinal storage (elastic) modulus than opposite wood from the same tree regardless of the presence or absence of a G‐layer. For the species containing a G‐layer, tension wood had a higher damping coefficient and experienced a greater longitudinal shrinkage upon drying than opposite wood from the same species. No difference was found in damping coefficients between tension wood and opposite wood for the species that had no G‐layer. Conclusion : It is proposed that the different molecular composition of the G-layer matrix has an influence on the viscoelasticity of wood, even if a biomechanical gain is not yet clear. This study shows that rheological properties and longitudinal shrinkage can be used to detect the presence of a G‐layer in tension wood.
ISSN: 1286-4560

hal-00677460
https://hal.archives-ouvertes.fr/hal-00677460
https://hal.archives-ouvertes.fr/hal-00677460/document
https://hal.archives-ouvertes.fr/hal-00677460/file/Clair2.pdf
DOI : 10.1007/s13595-011-0164-1

Éditeur(s) : HAL CCSD INRA/EDP Sciences
Résumé : absent
ISSN: 0003-4312

hal-01032373
https://hal.archives-ouvertes.fr/hal-01032373

Éditeur(s) : HAL CCSD Springer Verlag/EDP Sciences
Résumé : No efficient method is available to compare multi-locus estimates of diversity while taking into account inter-locus and inter-population stochastic variance. The advent of genome scan approaches makes the development of such tests absolutely necessary. We developed a method to compare genome-wide diversity estimates while taking into account-and factoring out-variation in census size and making use of inter-locus variance to assess significance of differences in diversity levels. An approach based on rarefaction with bootstrap re-sampling (RaBoT) was implemented into a test of multi-locus comparison of diversity coded in R. The properties of the test were studied by applying it to simulated populations with varying diversity levels and varying differences in diversity levels. The test was then applied to empirical data from disturbed and undisturbed populations of Virola michelii (Myristicaceae) genotyped at 693 amplified fragment length polymorphism (AFLP) markers. RaBoT was found to be rather conservative, with large numbers of false negatives when the diversity in the compared populations was similar, and false positives mostly associated to comparisons of populations with extremely high levels of diversity. When applied to empirical data, RaBoT detected higher genetic diversity in a post-disturbance than in an undisturbed population and lower genetic diversity in a seedling than in the corresponding adult population, but it also revealed differences in diversity between subgroups within the disturbed and undisturbed plots. RaBoT is a sensitive method to compare multi-locus levels of diversity that can be applied both at the genotype level for dominant markers (e.g. AFLP) and at the allele level for biallelic codominant markers (e.g. single-nucleotide polymorphisms).
ISSN: 1286-4560

hal-01032413
https://hal.archives-ouvertes.fr/hal-01032413
DOI : 10.1007/s13595-013-0302-z

Éditeur(s) : HAL CCSD EDP Sciences
Résumé : International audience
In this work, we point out and apply some ideas for the numerical simulation by multi- level schemes of several wave equations including dispersive (Korteweg de Vries) and dissipative ones (Kuramoto-Sivashinski). We start from the approach developed for dissipative equations decomposing the solution into large (Y) and small (Z) scales, and we show that it is necessary to have a regularization in time to allow stable numerical treatment of Y and Z which are here generated using hierarchical processes such as Wavelets, Incremental Unknowns or Fourier.
ISSN: 1270-900X

hal-00768332
https://hal.archives-ouvertes.fr/hal-00768332
https://hal.archives-ouvertes.fr/hal-00768332/document
https://hal.archives-ouvertes.fr/hal-00768332/file/esaim_proc_2009_v27.pdf

Éditeur(s) : Edp Sciences S A
Résumé : The present work examines the usefulness of the combination of multivariate analyses and further one-way analysis of variance in the search for links between causes and effects in heterologous stimulation of spawning in fish. Stimulations with both 20 and 50 mu g . kg(-1) doses of [D Trp(6)] luteinizing hormone-releasing hormone analogue (LH-RHa) were effective in inducing and synchronizing spawning of red drum, Sciaenops ocellatus. Oocyte development monitoring using ovarian biopsy allowed treatment injections at different stages of maturation. The influence at stimulation time of female oocyte development state upon further development was shown. An interesting potential of second stimulation, leading to high quality spawns, was established and factors of success were identified. The best conditions for stimulation success were simultaneously late stage of oocyte development characterized by the beginning of oil droplet coalescence, high ovarian homogeneity quoted by the proportion of most developed oocytes in the biopsy sample, and low dose of hormone (20 mu g . kg(-1)) for both first and second stimulations.
Ce travail examine l’intérêt de la combinaison d’analyses multivariées et de l’analyse de variance à un facteur pour la recherche de liens au sein d’expérimentations aquacoles faisant intervenir une diversité de causes et d’effets. L’injection de l’analogue [D Trp6] de la gonado-libérine (LH-RHa) est efficace aux doses de 20 et 50 íg×kg–1 pour provoquer et synchroniser les pontes chez l’ombrine, Sciaenops ocellatus. Un suivi du développement ovocytaire par biopsie ovarienne permet en outre de réaliser des injections à différents stades de maturation et l’influence du stade ovocytaire de la femelle, au moment de la stimulation sur la qualité de la ponte, est ainsi mise en évidence. Un potentiel intéressant suite à une seconde stimulation aboutissant à des pontes de qualité, est établi et des facteurs de réussite sont identifiés. Les meilleures conditions pour le succès de la stimulation sont simultanément : le dernier stade de développement ovocytaire, caractérisé par le début de coalescence de la gouttelette lipidique, la forte homogénéité ovarienne représentant la proportion des ovocytes les plus développés au sein de l’échantillon obtenu par biopsie, la faible dose hormonale (20 íg×kg–1) à la fois pour les premières et les secondes stimulations.
Aquatic Living Resources (0990-7440) (Edp Sciences S A), 2000-01 , Vol. 13 , N. 1 , P. 19-27

Droits : 2000 Ifremer/Cnrs/Inra/Ird/Cemagref/Éditions scientifiques et médicales Elsevier SAS. All rights reserved
http://archimer.ifremer.fr/doc/00187/29875/28361.pdf
DOI:10.1016/S0990-7440(00)00137-6
http://archimer.ifremer.fr/doc/00187/29875/

Éditeur(s) : HAL CCSD INRA/EDP Sciences
Résumé : 11 ref.
absent
ISSN: 0003-4312

hal-01032357
https://hal.archives-ouvertes.fr/hal-01032357

Éditeur(s) : HAL CCSD EDP Sciences
Résumé : International audience
The dynamic model of plant growth GreenLab describes plant architecture and functional growth at the level of individual organs. Structural development is controlled by formal grammars and empirical equations compute the amount of biomass produced by the plant, and its partitioning among the growing organs, such as leaves, stems and fruits. The number of organs initiated at each time step depends on the trophic state of the plant, which is evaluated by the ratio of biomass available in plant to the demand of all the organs. The control of the plant organogenesis by this variable induces oscillations in the simulated plant behaviour. The mathematical framework of the GreenLab model allows to compute the conditions for the generation of oscillations and the value of the period according to the set of parameters. Two case-studies are presented, corresponding to emergence of oscillations associated to fructification and branching. Similar alternating patterns are commonly reported by botanists. In this article, two examples were selected: alternate patterns of fruits in cucumber plants and alternate appearances of branches in Cecropia trees. The model was calibrated from experimental data collected on these plants. It shows that a simple feedback hypothesis of trophic control on plant structure allows the emergence of cyclic patterns corresponding to the observed ones.
ISSN: 0973-5348

hal-00780592
https://hal-ecp.archives-ouvertes.fr/hal-00780592
https://hal-ecp.archives-ouvertes.fr/hal-00780592/document
https://hal-ecp.archives-ouvertes.fr/hal-00780592/file/Mathieu_2012_Published_mmnp201276p47.pdf
DOI : 10.1051/mmnp/20127603

Éditeur(s) : HAL CCSD Springer Verlag/EDP Sciences
Résumé : Four populations of Norway spruce (Picea abies Karst.) were screened using nine nuclear microsatellite markers (three trinucleotides and six dinucleotides) and four chloroplast markers (all mononucleotides). Marker classes were compared for their variability, mutation rate and ability to detect differentiation between stands. Dinucleotide markers proved to be the most variable group and chloroplast stretches the least variable, with differences in mutation rate between the former and the latter spanning over two orders of magnitude. Variability correlated to the number of repeats but not to the absolute length of the microsatellite region. The different marker classes were combined with two different measures of genetic distance in order to investigate the performance of markers and evolutionary models for the study of genetic variation in natural populations of Norway spruce. Weir and Cockeram's F$_{rm ST}$ generally performed better in this clear-cut, four-population model study. Chloroplast haplotypes turned out to be the most sensitive marker system, being able to differentiate populations and to detect differences in genetic variability between sub-regions.
ISSN: 1286-4560

hal-01032048
https://hal.archives-ouvertes.fr/hal-01032048
DOI : 10.1051/forest:2006029