Éditeur(s) : HAL CCSD Cambridge University Press (CUP)
Résumé : International audience
We studied the monogenean communities of 34 species of butterflyfish from the tropical Indo-West Pacific, identifying 13 dactylogyrid species (including two species that are presently undescribed). Monogenean assemblages differed significantly between host species in terms of taxonomic structure, intensity and prevalence. Parasite richness ranged from 0 (Chaetodon lunulatus) to 11 (C. auriga, C. citrinellus and C. lunula). Host specificity varied between the dactylogyrids species, being found on 2-29 of the 34 chaetodontid species examined. Sympatric butterflyfish species were typically parasitized by different combinations of dactylogyrid species, suggesting the existence of complex host-parasite interactions. We identified six clusters of butterflyfish species based on the similarities of their dactylogyrid communities. Dactylogyrid richness and diversity were not related to host size, diet specialization, depth range or phylogeny of butterflyfish species. However, there was a weak positive correlation between monogenean richness and diversity and host geographical range. Most communities of dactylogyrids were dominated by Haliotrema aurigae and H. angelopterum, indicating the importance of the genus Haliotrema in shaping monogenean communities of butterflyfishes. This study casts light on the structure of the monogenean communities of butterflyfishes, suggesting that the diversity and complexity of community structures arises from a combination of host species-specific parameters.
ISSN: 0031-1820

hal-01380679
https://hal-univ-perp.archives-ouvertes.fr/hal-01380679
DOI : 10.1017/S0031182016001463

Éditeur(s) : George A. Smathers Libraries, University of Florida George A. Smathers Libraries, University of Florida ( Gainesville, FL )
Résumé : The UF Smathers Libraries partner with institutions and scholars to host and preserve digital collections, support scholarly publishing with digital collections, and support digital acquisitions to build shared collections. Clear benefits from partnerships are often supported with minimal costs by leveraging UF’s infrastructure for hosting, preservation, publishing, and acquisition. However, digital collections require ongoing support. In addition to the future “care and feeding,” new collections and projects also require support for various needs which may be one-time, infrequent, or a stable and continuous commitment throughout a project. These needs draw from digital curation and other areas (e.g., bulk ingesting materials, training for partners, liaising for grant proposal development, liaising for collection development and outreach, collaboration on activities related to specific projects as with training and outreach). Because of the immediate demands and ongoing commitments required for partnerships, potential new partnerships with the UF Libraries are reviewed for consideration and possible approval. This document provides background on partnerships with the UF Libraries, considerations for reviewing potential new partnerships for approval, and procedures for establishing new partnerships and ensuring optimal ongoing support.

Droits : [cc0] The author dedicated the work to the Commons by waiving all of his or her rights to the work worldwide under copyright law and all related or neighboring legal rights he or she had in the work, to the extent allowable by law.
http://ufdc.ufl.edu/AA00017119/00036

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Geographical distribution of parasite species can provide insights into the evolution and diversity of parasiticcommunities. Biogeography of marine parasites is poorly known, especially because it requires anunderstanding of host-parasite interactions, information that is rare, especially over large spatial scales.Here, we have studied the biogeographical patterns of dactylogyrid parasites of chaetodontids, one of themost well-studied fish families, in the tropical Indo-west Pacific region. Dactylogyrid parasites were collectedfrom gills of 34 butterflyfish species (n = 560) at nine localities within an approximate area of62 million km2. Thirteen dactylogyrid species were identified, with richness ranging from 6 to 12 speciesat individual localities. Most dactylogyrid communities were dominated by Haliotrema angelopterum orHaliotrema aurigae, for which relative abundance was negatively correlated (q = !0.59). Parasite richnessand diversity were highest in French Polynesia and the Great Barrier Reef (Australia) and lowest in Palau.Three biogeographic regions were identified based on dactylogyrid dissimilarities: French Polynesia,characterised by the dominance of H. angelopterum, the western Pacific region dominated by H. aurigae,and Ningaloo Reef (Australia), dominated by Euryhaliotrema berenguelae. Structure of host assemblageswas the main factor explaining the dissimilarity (turnover and nestedness components of the Bray-Curtis dissimilarity and overall Bray-Curtis dissimilarity) of parasite communities between localities,while environment was only significant in the turnover of parasite communities and overall dissimilarity.Spatial structure of localities explained only 10% of the turnover of parasite communities. The interactionof the three factors (host assemblages, environment and spatial structure), however, explained the highestamounts of variance of the dactylogyrid communities, indicating a strong colinearity between the factors.Our findings show that spatial arrangement of chaetodontid dactylogyrids in the tropical Indo-westPacific is primarily characterised by the turnover of the main Haliotrema spp., which is mainly explainedby the structure of host assemblages.
ISSN: 0020-7519

hal-01562156
https://hal-univ-perp.archives-ouvertes.fr/hal-01562156
DOI : 10.1016/j.ijpara.2017.01.006

Éditeur(s) : HAL CCSD Royal Society, The
Résumé : International audience
Bathymodiolin mussels occur at hydrothermal vents and cold seeps, where they thrive thanks to symbiotic associations with chemotrophic bacteria. Closely related genera Idas and Adipicola are associated with organic falls, ecosystems that have been suggested as potential evolutionary 'stepping stones' in the colonization of deeper and more sulphide-rich environments. Such a scenario should result from specializations to given environments from species with larger ecological niches. This study provides molecular-based evidence for the existence of two mussel species found both on sunken wood and bones. Each species specifically harbours one bacterial phylotype corresponding to thioautotrophic bacteria related to other bathymodiolin symbionts. Phylogenetic patterns between hosts and symbionts are partially congruent. However, active endocytosis and occurrences of minor symbiont lineages within species which are not their usual host suggest an environmental or horizontal rather than strictly vertical transmission of symbionts. Although the bacteria are close relatives, their localization is intracellular in one mussel species and extracellular in the other, suggesting that habitat choice is independent of the symbiont localization. The variation of bacterial densities in host tissues is related to the substrate on which specimens were sampled and could explain the abilities of host species to adapt to various substrates.
ISSN: 0950-1193

hal-00755293
https://hal.univ-antilles.fr/hal-00755293
DOI : 10.1098/rspb.2008.1101

Éditeur(s) : HAL CCSD
Résumé : International audience
Symbiosis is a widespread phenomenon in the biosphere. In marine benthic environments breakdown of symbiosis is responsible for coral bleaching and dramatically affects coral reef ecosystems functioning [1]. In the water column, planktonic organisms are key component of pelagic ecosystems and a number of species form mutualistic association with microalgae forming a photosymbiosis [2]. Here we intended to investigate the genetic basis of photosymbiosis, through a transcriptomic approach on marine plankton organisms. We focused more specifically on associations occurring between radiolarian host (protist, zooplankton) and dinoflagellates symbiont (protist, phytoplankton) living inside the host cell. It has recently been highlighted that these holobionts are widespread in oligotrophic open oceans and there are also evidences of their fundamental implication in biogeochemical carbon, silica and strontium cycles [3, 4, 5, 6]. RNA-seq technologies allow obtaining an unprecedented amount of data for unicellular organisms isolated from the environment [7]. The study of such non-model holobionts datasets requires de novo assembly, which implies considerable computational resources and the potential production of chimeric sequences [8, 9].We therefore developed an original strategy aiming at accelerating and improving de novo assembly for holobiont datasets. We chose SIMKA [10] a fast kmer-based method initially developed to estimate the similarity between numerous metagenomic datasets, and which has been recently adapted to extract their common sequences. As our symbionts are identified, we used SIMKA to compare our holobionts transcriptomes to publicly available dinoflagellates transcriptomes [11] generating two datasets, one composed of reads from the symbionts and another with reads from the host (for which no reference data are currently available). Independent assemblies were then performed in parallel, accelerating the study process, and minimizing the proportion of resulting chimeric sequences. Our strategy produced a unique and comprehensive genomic dataset for Radiolaria [12, 13], and offers a pragmatic, large scale, comparison strategy to assemble and study holobionts [9]. Our new sequences obtained from holobionts study will be used for phylogenomics investigation, as reference for environmental metagenomic studies and ultimately to understand and characterize the molecular basis of symbiotic relationships in the plankton.Bibliografic references :[1] Simon K. Davy, Denis Allemand, and Virginia M. Weis. “Cell Biology of Cnidarian-Dinoflagellate Symbiosis”. In: Microbiology and Molecular Biology Reviews 76.2 (June 1, 2012), pp. 229–261. issn: 1092-2172, 1098- 5557. doi: 10.1128/MMBR.05014-11.[2] Janouškovec, J. et al. “Major transitions in dinoflagellate evolution unveiled by phylotranscriptomics”. in: PNAS 201614842 (2016). doi:10.1073/pnas.1614842114[3] Tristan Biard et al. “In situ imaging reveals the biomass of giant protists in the global ocean”. In: Nature advance online publication (Apr. 20, 2016). issn: 0028-0836. doi: 10.1038/nature17652.[4] Lionel Guidi et al. “Plankton networks driving carbon export in the olig- otrophic ocean”. In: Nature 532.7600 (Apr. 28, 2016), pp. 465–470. issn: 0028-0836. doi: 10.1038/nature16942.[5] Diane K. Stoecker et al. “Acquired phototrophy in aquatic protists”. In: Aquatic Microbial Ecology 57.3 (Nov. 24, 2009), pp. 279–310. doi: 10.3354/ame01340.[6] Johan Decelle et al. “An original mode of symbiosis in open ocean plankton”. In: Proceedings of the National Academy of Sciences 109.44 (Oct. 30, 2012), pp. 18000–18005. issn: 0027-8424, 1091-6490. doi: 10. 1073/pnas.1212303109.[7] Sergio Balzano et al. “Transcriptome analyses to investigate symbiotic relationships between marine protists”. In: Frontiers in Microbiology 6 (Mar. 17, 2015). issn: 1664-302X. doi: 10.3389/fmicb.2015.00098.[8] Li, B. et al. “Evaluation of de novo transcriptome assemblies from RNA-Seq data”. In: Genome Biology 15, 553 (2014).[9] Sangwan, N., Xia, F. & Gilbert, J. A. “Recovering complete and draft population genomes from metagenome datasets”. In: Microbiome 4, 8 (2016).[10] Gaëtan Benoit et al. “Multiple comparative metagenomics using mul- tiset k -mer counting”. In: PeerJ Computer Science 2 (Nov. 14, 2016). doi: 10.7717/peerj-cs.94.[11] Patrick J. Keeling et al. “The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): Illuminating the Functional Diversity of Eukaryotic Life in the Oceans through Transcriptome Sequencing”. In: PLOS Biol 12.6 (June 2014), e1001889. issn: 1545-7885. doi: 10.1371/journal.pbio.1001889.[12] Burki, F. et al. “Evolution of Rhizaria: new insights from phylogenomic analysis of uncultured protists”. In BMC Evolutionary Biology 10, 377 (2010).
International Conference on Holobionts
Paris, France

hal-01575069
https://hal.inria.fr/hal-01575069

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : International audience
In chemoautotrophic associations, sequence comparison of 16S rRNA has been the method of choice to study bacterial diversity in the context of host/symbiont coevolution. However, the relative low rate of evolution of 16S rRNA has been shown to result in a diminished capacity to discriminate between closely related bacterial strains or species. Within chemoautotrophic associations, as described in several studies, the use of other genetic markers may reveal previously unobserved strain diversity among gill endosymbionts. Herein, we conducted a survey of symbionts harbored by six species within the Lucinidae family using five genetic markers (dnaE, gyrB, aprA, cbbL genes and the 16S-23S internal transcribed spacer). Thus, within the already described SoLuc₁ bacterial species shared by six host species we observed an obvious bacterial strain diversity. This diversity is structured in function of the geographic location of the hosts and not in function of ecological parameters or host phylogeny. Interestingly at the local level (same seagrass bed environment), we observed an unexpected specificity in host species/bacterial strain association (i.e., all individuals of the same host species harbor the same symbiotic sequence type). This specificity of association implied that there was a control of symbiont strain acquisition by the host, which was confirmed by a cross-infection experiment of starved adults performed in our study. Based upon our results and other evidence from the literature, we hypothesize that this pattern may be due to a ``capture/escape'' type antagonist evolution of the two partners.
ISSN: 0025-3162

hal-01544753
https://hal.archives-ouvertes.fr/hal-01544753
DOI : 10.1007/s00227-016-2949-0

Éditeur(s) : HAL CCSD Biopress Limited
Résumé : International audience
Obligately epizoic diatoms (Bacillariophyta) on vertebrates were first described from cetaceans, but turtles, both freshwater and marine, also host very specific floras. Several scrapings of juvenile Chelonia mydas have allowed the description of two new diatom taxa whose valves are asymmetrical about the transapical axis, Tripterion societatis sp. nov. and Chelonicola caribeana sp. nov. These taxa are very small and show some morphological plasticity. Such plasticity might suggest their inclusion in genera with slightly different characteristics from Tripterion and Chelonicola as originally delimited. Based on our observations, an emended diagnosis is proposed for Chelonicola.
ISSN: 2159-8347

hal-01500418
https://hal.archives-ouvertes.fr/hal-01500418
DOI : 10.1080/0269249X.2017.1299042

Éditeur(s) : Soc Francaise D Ichtyologie
Résumé : A total of 664 Boops Boops (Linnaeus, 1758) and 823 Mullus barbatus barbatus Linnaeus, 1758 from the east coast of Algeria were examined to study their parasitofauna. We collected eleven parasitic species (two monogeneans, three copepods, five isopods and one Branchiura) from B. boops, and four parasitic species (two copepods and two isopods) from M. barbatus barbatus. Five species were reported for the first time in Algeria. The site of attachment on the host and the degree of specificity varied according to the parasite species while the infestation rate changed according to the month and the host size. The parasitism did not show a significant negative impact on the biological parameters of the fish host.
Au total, 664 Boops Boops (Linnaeus, 1758) et 823 Mullus barbatus barbatus Linnaeus, 1758 capturés le long du littoral Est de l’Algérie ont été examinés afin d’étudier leur parasitofaune. Sur B. boops, nous avons récolté 11 espèces d’ectoparasites (deux monogènes, trois copépodes, cinq isopodes et un Branchioura), et quatre espèces sur M. barbatus barbatus (deux copépodes et deux isopodes). Parmi les 14 ectoparasites identifiés, cinq ont été récoltés pour la première fois en Algérie. Le site d’attache sur l’hôte et le degré de spécificité étaient différents selon les espèces de parasites. Le taux d’infestation variait selon le mois et la taille de l’hôte. Le parasitisme n’a induit aucun impact négatif significatif sur les paramètres biologiques des poissons hôtes.
Cybium (0399-0974) (Soc Francaise D Ichtyologie), 2013-04 , Vol. 37 , N. 1-2 , P. 59-66

Droits : 2013 Société Française d'Ichtyologie
http://archimer.ifremer.fr/doc/00148/25901/23918.pdf
http://archimer.ifremer.fr/doc/00148/25901/

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : International audience
Zelus annulosus is an assassin bug species mostly noted on Hirtella physophora, a myrmecophyte specifically associated with the ant Allomerus decemarticulatus known to build traps on host tree twigs to ambush insect preys. The Z. annulosus females lay egg clutches protected by a sticky substance. To avoid being trapped, the first three instars of nymphs remain grouped in a clutch beneath the leaves on which they hatched, yet from time to time, they climb onto the upper side to group ambush preys. Long-distance prey detection permits these bugs to capture flying or jumping insects that alight on their leaves. Like some other Zelus species, the sticky substance of the sundew setae on their forelegs aids in prey capture. Group ambushing permits early instars to capture insects that they then share or not depending on prey size and the hunger of the successful nymphs. Fourth and fifth instars, with greater needs, rather ambush solitarily on different host tree leaves, but attract siblings to share large preys. Communal feeding permits faster prey consumption, enabling small nymphs to return sooner to the shelter of their leaves. By improving the regularity of feeding for each nymph, it likely regulates nymphal development, synchronizing molting and subsequently limiting cannibalism.
ISSN: 0028-1042

hal-01091981
https://hal.archives-ouvertes.fr/hal-01091981
https://hal.archives-ouvertes.fr/hal-01091981/document
https://hal.archives-ouvertes.fr/hal-01091981/file/Dejean_11543.pdf
DOI : 10.1007/s00114-013-1091-9

Éditeur(s) : HAL CCSD Wiley-Blackwell
Résumé : International audience
The first studies of the 16S rRNA gene diversity of the bacterial symbionts found in lucinid clams did not clarify how symbiotic associations had evolved in this group. Indeed, although species-specific associations deriving from a putative ancestral symbiotic association have been described (coevolution scenario), associations between the same bacterial species and various host species (opportunistic scenario) have also been described. Here, we carried out a comparative molecular analysis of hosts, based on 18S and 28S rRNA gene sequences, and of symbionts, based on 16S rRNA gene sequences, to determine as to which evolutionary scenario led to modern lucinid/symbiont associations. For all sequences analyzed, we found only three bacterial symbiont species, two of which are harbored by lucinids colonizing mangrove swamps. The last symbiont is the most common and was found to be independent of biotope or depth. Another interesting feature is the similarity of ctenidial organization of lucinids from the Philippines to those described previously, with the exception that two bacterial morphotypes were observed in two different species (Gloverina rectangularis and Myrtea flabelliformis). Thus, there is apparently no specific association between Lucinidae and their symbionts, the association taking place according to which bacterial species is present in the environment.
ISSN: 0168-6496

hal-00743766
https://hal.univ-antilles.fr/hal-00743766
DOI : 10.1111/j.1574-6941.2010.00989.x

Éditeur(s) : HAL CCSD Université des Antilles
Résumé : International audience
Poverty is a global concern and international tourism is seen as a tool to fight against poverty.This is the issue addressed in this reflection: What is poverty? Consider tourism as a remedy requires first to question the nature of evil. It is therefore necessary to analyze at first, poverty without reducing to its economic approach. Poverty is a multidimensional concept, which should be studied in a systematic approach. Tourism attracted international institutions and many politicians (at local and national levels) by its development opportunities. Tourism is distinguished by its adaptability and its ability to transform host environments. These are consumers who move from producers (home territories). This activity therefore provides direct revenue for the host societies.Hence the tourism capabilities to create specific jobs and stimulate investment. However, if the economic potential is undeniable, this activity should be placed in a real development project that benefits the poorest territories.
La pauvreté est une préoccupation à l’échelle mondiale et le tourisme international est envisagé comme un outil de lutte contre la pauvreté. Telle est la problématique abordée dans cette réflexion : qu’est-ce que la pauvreté ? Envisager le tourisme comme un remède nécessite d’abord de s’interroger sur la nature du mal. Il convient donc d’analyser dans un premier temps, la pauvreté sans la réduire à sa seule approche économique. La pauvreté est un concept multidimensionnel qui doit être étudié dans une démarche systémique.Le tourisme séduit les instances internationales et nombre de responsables politiques (aux échelles locale et nationale) par ses opportunités de développement. Le tourisme se distingue par sa capacité d’adaptation et de transformation des environnements d’accueil. Ce sont les consommateurs qui se déplacent chez les producteurs (les territoires d’accueil). Cette activité apporte donc des revenus directs pour les sociétés d’accueil. D’où la création d’emplois spécifiques et la stimulation des investissements. Cependant, si les potentialités économiques sont indéniables, il faut placer cette activité dans un véritable projet de développement pour qu’elle bénéficie aux territoires les plus pauvres.
ISSN: 1779-0980

Droits : http://creativecommons.org/licenses/by-nc/
hal-01368486
https://hal.univ-antilles.fr/hal-01368486
https://hal.univ-antilles.fr/hal-01368486/document
https://hal.univ-antilles.fr/hal-01368486/file/tourisme-et-pauvrete-le-champ-des-possibles.pdf
DOI : 10.4000/etudescaribeennes.6578

Éditeur(s) : HAL CCSD Société Géologique de France
Résumé : The Udachnaya-East pipe in Yakutia in Siberia hosts a unique dry (serpentine-free) body of hypabyssal kimberlite (<0.64wt% H2O), associated with a less dry type of kimberlite and a serpentinized kimberlitic breccia. The dry kimberlite is anomalously rich in salts (Na2O and Cl both up to 6wt%) whereas the slightly less dry and the breccia kimberlite are salt free. Yet the Udachnaya kimberlite is a group-I kimberlite, as is the archetypical kimberlite from Kimberley, South Africa. Samples were studied from the three different types of kimberlite (dry-salty, n=8, non-salty, n=5 and breccia, n=3) regarding their mineralogy, geochemistry, and more specifically their sulfur content. Our results show the salty kimberlite is unprecedentedly rich in sulfur (0.13-0.57wt%) compared to the non-salty kimberlite (0.04-0.12wt%) and the breccia (0.29-0.33wt%). In the salty kimberlite, most of the sulfur is present as sulfates (up to 97% of Stotal) and is disseminated throughout the groundmass in close association with Na-K-bearing carbonates. Sulfates occur within the crystal structure of these Na-K-bearing carbonates as the replacement of (CO3) by (SO3) groups, or as Na- and K-rich sulfates (e.g. aphtitalite, (K,Na)3Na(SO4)2). The associated sulfides are djerfisherite; also Na- and K-rich species. The close association of sulfates and carbonates in these S-rich alkaline rocks suggests that the sulfates crystallized from a mantle-derived magma, a case that has strong implication for the oxygen fugacity of kimberlite magmatism and more generally for the global S budget of the mantle.
ISSN: 0037-9409

hal-01622633
https://hal.archives-ouvertes.fr/hal-01622633
DOI : 10.1051/bsgf/2017007

Éditeur(s) : Université des Antilles Études caribéennes
Résumé : Sur fond de crise du tourisme au Nord, de la globalisation de l’économie et de l’accélération des mobilités, une évolution des formes de développement touristiques semble à l’œuvre dans les confins géographiques. Dans certains territoires touristiques du fait de conflits dans l’usage des ressources naturelles, des pratiques récréatives alternatives émergent qui combinent une logique économique avec des préoccupations socio-environnementales.Notre article analyse l’apparition du tourisme scientifique dans la région « non-touristique » de Aysén, en Patagonie chilienne. Des acteurs d’un territoire se mobilisent selon des pôles culturels et des axes thématiques autour de projets pilotes, de recherche expérientielle et de médiations scientifiques innovantes. Sur ce front pionnier, un réseau informel d’acteurs coordonne ses actions pour aborder les problématiques sociales et environnementales de leur territoire. Opérateurs et prestataires pour le tourisme scientifique créent de manière participative une offre originale. Un système touristique alternatif, axé sur la protection de l’environnement, de la culture et des dynamiques sociales de la communauté d’accueil, favorise l’acquisition et le partage de savoirs entre scientifiques, acteurs locaux et visiteurs.Le tourisme scientifique s’inscrit-il dans une évolution globale des pratiques touristiques ? En proposant de dépasser les frontières, entre activités récréatives et le travail, de lieux de vie et de loisir, il apparaît comme l’expression d’un « après-tourisme ». L’hybridation des pratiques, une approche scientifique associée à l’esprit de la découverte inhérent au voyage, semble pouvoir relever des défis sociétaux liés à l’essor d’un tourisme globalisé. Alors que le tourisme est pensé depuis longtemps en termes de transfert de compétences, de modèles et d’ingénierie du Nord vers le Sud, une périphérie propose de nouveaux cadres de pensée, d’action et de participation qui renouvellent le sens du voyage.
In the context of a tourism crisis in the north, a globalized economy and an increase of mobility, a change in the forms of tourism development seems to occur in peripheral areas. In some tourism areas and due to conflicts over the use of natural resources, alternative recreational practices arise that combine economic needs and socio-environmental concerns.Our article analyzes the appearance of scientific tourism in the "non-tourist" region of Aysén, in Chilean Patagonia. Actors of a territory unite according to specific cultural poles and thematic axes through experiential research and innovative scientific mediation pilot projects. On this pioneer front, an informal network of stakeholders coordinates its actions to address the social and environmental issues of their territory. Operators and service providers for scientific tourism create an innovative offer in a participatory process. An alternative tourism system, focused on protecting the environment, the culture and social dynamics of the host community, promotes the acquisition and sharing of knowledge between scientists, local actors and visitors.Is scientific tourism part of a global evolution of tourism practices? By proposing to go beyond established boundaries, of recreational activities and work, everyday places and leisure areas, it appears as the expression of an “After-Tourism”. The hybridization of practices, a scientific approach associated with the spirit of the discovery inherent of the travel experience, seems to respond to the challenges of the community confronted to the rise of a globalized tourism. While tourism has always been thought of in terms of transfer of skills, models and engineering from the North to the South, a periphery offers new frameworks of thought, action and participation that renew the meaning of travel.
En un escenario de crisis del turismo en los países desarrollados, de la globalización de la economía y del incremento de las movilidades, una evolución de las formas de desarrollo del turismo parece estar en marcha en los confines geográficos. En ciertos territorios turísticos, debido a los conflictos de uso de los recursos naturales, prácticas recreativas alternativas surgen que combinan una lógica económica con preocupaciones socio-ambientales.El presente artículo analiza el surgimiento del turismo científico en la región “no-turística” de Aysén en la Patagonia chilena. Actores del territorio se unen según polos y temáticas científicas, a través de proyectos pilotos, de investigación experiencial y mediaciones científicas innovadoras. En este frente pionero, una red informal se organiza para abordar las problemáticas sociales y ambientales de su territorio. Operadores y proveedores de servicios para el turismo científico crean de manera participativa una oferta novedosa. Un sistema turístico alternativo, basado en el cuidado del medio ambiente, de la cultura y de las dinámicas sociales del comunidad de acogida, favorece la adquisición y el intercambio de conocimientos entre científicos, actores locales y visitantes. ¿Será la aparición del turismo científico la expresión de una evolución global de las practicas turísticas? Al invitar a que sean sobrepasadas las fronteras, entre actividades recreativas y el trabajo, lugares de vida y sitios de esparcimiento, este se presenta como un “Pos-Turismo”. La hibridación de las prácticas, una aproximación científica asociada al espíritu de descubrimiento inherente del viaje, parece poder resolver los desafíos de nuestras sociedades vinculados al auge de un turismo globalizado. Cuando el turismo suele ser pensado desde hace mucho, como un proceso de transferencia de capacidades, de modelos y de ingenierías, del Norte hacia el Sur, una periferia propone nuevos marcos conceptuales, de acción y de participación, que renuevan el sentido del viaje.
Patagonie

Droits : info:eu-repo/semantics/openAccess
urn:doi:10.4000/etudescaribeennes.11169
http://journals.openedition.org/etudescaribeennes/11169

Éditeur(s) : Université des Antilles Études caribéennes
Résumé : La question que pose cet article est : comment un individu cosmopolite, à partir du geste réflexif de s’éprouver dans le regard de l’autre, peut-il saisir et se représenter son appartenance à une commune humanité ? Nous proposons que la socialisation cosmopolite soit intimement liée à la nature du groupe d’accueil dans lequel se fait l’immersion dans un ailleurs. Or, cette rencontre ne peut se faire avec l’humanité en général, mais elle prend forme dans l’interrelation entre deux ou plusieurs entités culturelles spécifiques. Ce qui nous ouvre à d’autres questions : de quelle altérité parle-t-on ? Pour qui ? Pourquoi ? Pour quoi ? De ce fait, le sentiment d’appartenance à une commune humanité, s’il est, au moins dans une certaine mesure, partagé par tout individu cosmopolite, l’est à entendre d’un point de vue utopique. Si la socialisation cosmopolite dans des enclaves backpacker ou des dispositifs d’échanges universitaires est réalisée dans une logique d’intégration principalement dirigée vers une communauté occidentale cosmopolite, une autre forme de socialisation, par l’expérience de la grande itinérance, serait ainsi possible. Cette dernière serait immergée dans les cultures locales, elle serait éphémère, aléatoire, hétérogène et principalement réalisée dans le rite des hospitalités, et peut ainsi représenter une forme différente d’élaboration du sentiment cosmopolite. En effet, celle-ci ne serait pas élaborée dans la tension entre deux modèles (intégration), mais dans une réaction en chaine de multiples modèles, qui, par sérendipités, se travaillent les unes les autres, dans de multiples directions, sans pouvoir se fixer, ouvrant ainsi à la diversité de l’humanité. S’il faut ici parler de socialisation cosmopolite, elle serait plutôt à entendre sur le plan anthropologique qu’ethnologique.
The question raised by this article is: how a cosmopolitan individual, from the reflective gesture of experiencing himself in the gaze of the other, can grasp and represent his belonging to a common humanity. We propose that cosmopolitan socialization be intimately linked to the nature of the host group in which the immersion takes place. However, this encounter cannot be made with humanity in general, but it takes shape in the interrelationship between two or more specific cultural entities. What opens us to others questions: what kind of otherness are we talking about? For whom? Why? In which purpose? As a result, the feeling of belonging to a common humanity, if it is shared, at least to some extent, by each cosmopolitan individual, is to be understood from a utopian point of view. If cosmopolitan socialization in backpacker enclaves or academic exchanges is carried out in the logic of integration mainly directed towards a cosmopolitan Western community, then another form of socialization through the experience of itinerancy would be possible. The latter would be immersed in local cultures, it would be ephemeral, random and heterogeneous and mainly carried out in the rite of hospitalities, and may thus represent a different form of elaboration of cosmopolitan feeling. Indeed, this would not be elaborated in the tension between two models (integration), but in a chain reaction of multiple models, which by serendipities, work one another, in multiple directions, without being able to stabilized, opening to the diversity of humanity. If we speak here of cosmopolitan socialization, it would rather be understood on the anthropological level than on an ethnological one.

Droits : info:eu-repo/semantics/openAccess
urn:doi:10.4000/etudescaribeennes.11283
http://journals.openedition.org/etudescaribeennes/11283

Éditeur(s) : HAL CCSD BioMed Central
Résumé : [b]Background[/b]: [i]Amblyomma variegatum[/i] and [i]A. hebraeum[/i] are two ticks of veterinary and human health importance in south-east Africa. In Zimbabwe they occupy parapatric (marginally overlapping and juxtaposed) distributions. Understanding the mechanisms behind this parapatry is essential for predicting the spatio-temporal dynamics of Amblyomma spp. and the impacts of associated diseases. It has been hypothesized that exclusive competition between these species results from competition at the levels of male signal reception (attraction-aggregation-attachment pheromones) or sexual competition for mates. This hypothesis predicts that the parapatry described in Zimbabwe could also be present in other countries in the region. [br/][b]Methods[/b]: To explore this competitive exclusion hypothesis we conducted field surveys at the two species' range limits in Mozambique to identify areas of sympatry (overlapping areas) and to study potential interactions (communicative and reproductive interference effects) in those areas. At sympatric sites, hetero-specific mating pairs were collected and inter-specific attractiveness/repellent effects acting at long and short distances were assessed by analyzing species co-occurrences on co-infested herds and co-infested hosts.[br/] [b]Results[/b]: Co-occurrences of both species at sampling sites were infrequent and localized in areas where both tick and host densities were low. At sympatric sites, high percentages of individuals of both species shared attachment sites on hosts and inter-specific mating rates were high. Although cross-mating rates were not significantly different for[i] A. variegatum[/i] and [i]A. hebraeum[/i] females, attraction towards hetero-specific males was greater for [i]A. hebraeum[/i] females than for A. variegatum females and we observed small asymmetrical repellent effects between males at attachment sites.[br/][b]Conclusions[/b]: Our observations suggest near-symmetrical reproductive interference between [i]A. variegatum[/i] and [i]A. hebraeum[/i], despite between-species differences in the strength of reproductive isolation barriers acting at the aggregation, fixation and partner contact levels. Theoretical models predict that sexual competition coupled with hybrid inviability, greatly reduces the probability of one species becoming established in an otherwise suitable location when the other species is already established. This mechanism can explain why the parapatric boundary in Mozambique has formed within an area of low tick densities and relatively infrequent host-mediated dispersal events.
ISSN: 1756-3305

hal-01220744
https://hal.archives-ouvertes.fr/hal-01220744
https://hal.archives-ouvertes.fr/hal-01220744/document
https://hal.archives-ouvertes.fr/hal-01220744/file/2015%20Bournez%20Parasites%20%26%20Vectors_%7B365AAFF5-7041-480B-9B77-9CD0485A9B72%7D.pdf
DOI : 10.1186/s13071-015-1116-7

Éditeur(s) : Université de Montpellier II
Résumé : Penaeid family shrimp constitute the first aquaculture product in the world in terms of commercial value. They are produced in third world countries of the sub-equatorial belt. Among the causes limiting their production, one is the presence of the WSSV (White Spot Syndrome Virus), a pathogenic agent that produces massive mortality. Our aim was to investigate the first stages of the viral infection, in order to be used as target of prophylactic actions. A fish cell line (SSN-1) was used as model to tentatively develop in vitro studies. Only defective particles were produced confirming the high specificity to crustacea of the infection with crustacean virus. Electron microscopy showed structural similarities between the WSSV and B, B2 and Baculo-B viruses of crabs. This suggests B2 may belong also to the family Nimaviridae, genus Whispovirus. This comparison with B2 virus gives the possibility to understand the role played by the tail-like extension of these viruses in the infectious process by attachment to the plasmic membrane at the beginning of the infection in its specific host.
Les crevettes de grande taille de la famille des Penaeidae constituent le premier produit aquacole en valeur commerciale à l'échelle planétaire. Elles sont produites à 99% dans les pays en voie de développement de la ceinture sub-équatoriale. Parmi les causes limitant leur production, le White Spot Syndrome Virus est l'agent pathogène ayant provoqué le plus des pertes dans le monde. Notre étude a été orientée vers la reconnaissance des premiers stades de l'infection, susceptibles d'être la cible d'une action prophylactique. Nous avons testé l'utilisation d'une lignée cellulaire de poisson SSN-1 afin d'étudier les possibilités d'un développement in vitro. Seules des particules défectives ont été produites confirmant la haute spécificité des infections à virus de crustacés. Les recherches en microscopie électronique ont montré une similarité structurale du WSSV avec les virus (B, B2 et Baculo-B) des crabes. Ceci suggère que ces agents (B2 et WSSV) seraient tout deux de la famille des Nimaviridae et du genre Whispovirus. La comparaison avec le virus B2 permet de comprendre le rôle clef joué par la partie caudale de ces virus dans l'infection par son attachement à la membrane plasmique lors de l'infection chez son hôte spécifique.

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/2008/these-6650.pdf
http://archimer.ifremer.fr/doc/00000/6650/

Éditeur(s) : Université des Antilles Études caribéennes
Résumé : Le débat théorique sur les migrations et la famille connait une ambivalence allant du postulat de la migration comme une logique « individualiste » et de distanciation de la famille à celui de la migration vue comme une stratégie de survie portée par le réseau familial. C’est dans le but de contribuer à ce débat que le présent texte aborde l’analyse du processus migratoire sous l’angle des stratégies déployées par les migrants « Hloua » de la côte béninoise. Quatre dimensions ont particulièrement retenu notre attention : la prise de décision, le financement et l’organisation du voyage, l'intégration dans le milieu d’accueil, et les rapports maintenus avec le milieu d'origine.L’analyse s’appuie sur les récits de migration collectés auprès de migrants de retour ou de membres de familles restés au village, ceci dans le cadre d’une enquête plus large sur la pauvreté et les stratégies de survie dans le milieu de la pêche artisanale (Avloh, Ayiguinnou et Agoué) au Bénin. Cette analyse de récit a été complétée par des analyses de type quantitatif sur la fréquence des recours pour l’organisation et la prise de décision, la fréquence de recours pour l’insertion résidentielle et professionnelle, et le montant des envois de fonds. Les résultats montrent la place centrale du réseau familial le long du processus migratoire depuis la prise de décision, l’organisation du voyage, le « confiage » de la femme et des enfants du migrant, à l’établissement résidentiel et l’insertion professionnelle dans le milieu d’accueil. Ce réseau organise et structure efficacement le phénomène migratoire en intervenant lors des étapes décisives. Cependant, une fois insérés, les rapports maintenus avec le réseau familial se limitent pour la plupart à une solidarité affective, caractérisée par des contacts téléphoniques ou transferts de message et quelques envois de fonds largement en deçà des attentes. Ce qui fait dire de plus en plus que le migrant diminue le capital social de la famille sans pour autant y contribuer de façon substantielle sur le plan financier : Un paradoxe qui pourrait bien trouver son explication dans les recherches futures sous une perspective dynamique des migrations.
The theoretical debate on migration and family is ambivalent. Migration can be seen from an “individualist’’ and distant logic of the family or, on the other hand, migration can be viewed as a strategy of survival for the family network. It is in the objective of contributing to this debate, the present article will analyze the migration process from a migrant strategy perspective, more specifically from the perspective of the “Hloua” migrants off the Benin coast. Four dimensions are of particular interest: the decision making process, the cost and organization of the trip, integration in the host community and the maintenance of relations with the host community. Within a large scale research on poverty and the strategies of survival of artisan fishing (Avloh, Ayiguinnou et Agoué) in Bénin, the present analysis is based on migration stories collected from returning migrants or from family members still living in the village. This story analysis has been completed with quantitative analyses on the frequency of the use of organization and decision making, the frequency of the use of residential and professional insertion, and the amount of remittances. The results show the central place of family ties during the migratory process from the start of the decision making process, the travel planning, the entrusting of the women and children of the migrant, to the residential establishment and the professional insertion in the host society. This network organizes and structures efficiently the migratory phenomenon by intervening during the decisive steps. However, once inserted, the connections maintained with the family network are limited for the majority to an affective solidarity characterized by telephone contacts or message transfers, and sometimes remittances sent back largely lower to the family’s expectations. This results more and more in the migrant diminishing the social capital of the family without always contributing in some substantially way on the financial side. A paradox which could find its explanation in future researches under a perspective of migrations’ dynamics.
Bénin

Droits : info:eu-repo/semantics/openAccess
urn:doi:10.4000/etudescaribeennes.5785
http://journals.openedition.org/etudescaribeennes/5785

Éditeur(s) : HAL CCSD
Résumé : International audience
The presence of photosynthetic zooxanthellae (dinoflagellates) in the tissue of many cnidarians is the main reason for their ecological success (i.e. coral reefs). It could also be the main cause of their demise, as the worldwide bleaching of reef-building coral is nothing less than the breakdown of this symbiotic association. The stability of this relationship is the principal marker for the biomonitoring of cnidarian health. We have therefore developed a new, simple method to isolate zooxanthellae in a few steps using NaOH solution. The protocol was validated in three symbiotic cnidarian species: a sea anemone, a gorgonian and a coral. Our method allows the isolation of intact and viable zooxanthellae with better yields than classic methods, especially for species with a calcareous skeleton. Moreover, the isolated zooxanthellae were free of host nucleic contaminants, facilitating subsequent specific molecular analyses.
Journal of Experimental Biology

hal-01546180
https://hal.archives-ouvertes.fr/hal-01546180
DOI : 10.1242/jeb.074955

Éditeur(s) : HAL CCSD American Society for Microbiology
Résumé : International audience
Under physiological conditions, the liver sinusoidal endothelial cells (LSECs) mediate hepatic immune tolerance toward self or foreign antigens through constitutive expression of anti-inflammatory mediators. However, upon viral infection or Toll-like receptor 2 (TLR2) activation, LSECs can achieve proinflammatory functions, but their role in hepatic inflammation during acute viral hepatitis is unknown. Using the highly virulent mouse hepatitis virus type 3 (MHV3) and the attenuated variants 51.6-MHV3 and YAC-MHV3, exhibiting lower tropism for LSECs, we investigated in vivo and in vitro the consequence of LSEC infection on their proinflammatory profiles and the aggravation of acute hepatitis process. In vivo infection with virulent MHV3, in comparison to attenuated strains, resulted in fulminant hepatitis associated with higher hepatic viral load, tissue necrosis, and levels of inflammatory mediators and earlier recruitment of inflammatory cells. Such hepatic inflammatory disorders correlated with disturbed production of interleukin-10 (IL-10) and vascular factors by LSECs. We next showed in vitro that infection of LSECs by the virulent MHV3 strain altered their production of anti-inflammatory cytokines and promoted higher release of proinflammatory and procoagulant factors and earlier cell damage than infection by attenuated strains. This higher replication and proinflammatory activation in LSECs by the virulent MHV3 strain was associated with a specific activation of TLR2 signaling by the virus. We provide evidence that TLR2 activation of LSCEs by MHV3 is an aggravating factor of hepatic inflammation and correlates with the severity of hepatitis. Taken together, these results indicate that preservation of the immunotolerant properties of LSECs during acute viral hepatitis is imperative in order to limit hepatic inflammation and damage. IMPORTANCE Viral hepatitis B and C infections are serious health problems affecting over 350 million and 170 million people worldwide, respectively. It has been suggested that a balance between protection and liver damage mediated by the host's immune response during the acute phase of infection would be determinant in hepatitis outcome. Thus, it appears crucial to identify the factors that predispose in exacerbating liver inflammation to limit hepatocyte injury. Liver sinusoidal endothelial cells (LSECs) can express both anti- and proinflammatory functions, but their role in acute viral hepatitis has never been investigated. Using mouse hepatitis virus (MHV) infections as animal models of viral hepatitis, we report for the first time that in vitro and in vivo infection of LSECs by the pathogenic MHV3 serotype leads to a reversion of their intrinsic anti-inflammatory phenotype toward a proinflammatory profile as well to as disorders in vascular factors, correlating with the severity of hepatitis. These results highlight a new virus-promoted mechanism of exacerbation of liver inflammatory response during acute hepatitis.
ISSN: 0022-538X

hal-01390974
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01390974
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01390974/document
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01390974/file/Mouse%20Hepatitis%20Virus%20Infection_accepted.pdf
DOI : 10.1128/JVI.01069-16

Éditeur(s) : HAL CCSD Elsevier Masson
Résumé : International audience
Symbioses with the dinoflagellate Symbiodinium are widespread among marine invertebrates and protists, especially in nutritionally demanding habitats, such as tropical coral reefs, where they play a major role in ecosystem survival. Moreover, apart from corals and sea anemones, many of the Symbiodinium species and clades involved in these partnerships remain to be characterized. This study provides new insights into nudibranch and sponge associations with Symbiodinium by sequencing regions of the Symbiodinium 28S rDNA and the host mitochondrial COI oxidase. Specimens were sampled between 2011 and 2013 from locations around the islands of Moorea and Tahiti, French Polynesia. Our results revealed that some of the sponges and nudibranchs harbored typical Symbiodinium from clade B or C while others harbored new, undescribed Symbiodinium-like dinoflagellates. A detailed analysis of the different life stages of the nudibranch Phestilla lugubris and of its specific coral prey, Porites rus, suggests a prey-predator horizontal transfer of the symbiont and its vertical inheritance from the parent to the eggs.
Les symbioses à zooxanthelles, dinoflagellés du genre Symbiodinium, sont largement répandues chez les invertébrés marins et les protozoaires, notamment dans les eaux oligotrophes, où ils jouent un rôle important dans la survie des récifs coralliens. De plus, excepté chez les coraux et les anémones, les différentes espèces et clades de Symbiodinium impliqués dans ces associations restent à être caractérisés. Notre étude, grâce à l’utilisation des marqueurs génétiques 28S ADNr des Symbiodinium et la sous-unité 1 de la cytochrome oxydase mitochondriale (COI) de l’hôte, procure de nouvelles données quant aux associations des éponges et des nudibranches avec les Symbiodinium. L’échantillonnage a eu lieu autour de Moorea et de Tahiti (Polynésie française), entre 2011 et 2013. Nos résultats révèlent que certaines espèces d’éponges et de nudibranches possèdent les clades B et C communément retrouvés, chez les coraux notamment, alors que d’autres présentent de nouveaux dinoflagellés « Symbiodinium-like ». Une analyses détaillée des Symbiodinium à différents stades du cycle de vie du nudibranche corallivore Phestilla lugubris et de son corail hôte Porites rus suggèrent l’existence d’un transfert horizontal de Symbiodinium proie–prédateur et un transfert vertical du parent P. lugubris à ses œufs.
ISSN: 1631-0691

hal-01145518
https://hal.archives-ouvertes.fr/hal-01145518
DOI : 10.1016/j.crvi.2015.01.005