Éditeur(s) : HAL CCSD Society for the Study of Reproduction
Résumé : International audience
Spermmotility notably depends on the structural integrity of the flagellum and the regulation ofmicrotubule dynamics. Although researchers have started to use " omics" techniques to characterize the human sperm's molecular landscape, the constituents responsible for the assembly, organization, and dynamics of the flagellum microtubule have yet to be fully defined. In this study, we defined a core set of 116 gene products associated with the human sperm microtubulome (including products potentially involved in abnormal ciliary phenotypes and male infertility disorders). To this end, we designed and applied an integrated genomics workflow and combined relevant proteomics, transcriptomics, and interactomics datasets to reconstruct a dynamic interactome map. By further integrating phenotypic information, we defined a disease-interaction network; this enabled us to highlight a number of novel factors potentially associated with altered sperm motility and male fertility. Lastly, we experimentally validated the expression pattern of two candidate genes (CUL3 and DCDC2C) that had never previously been associated with male germline differentiation. Our analysis suggested that CUL3 and DCDC2C's products have important roles in the sperm flagellum. Taken as a whole, our results demonstrate that an integrated genomics strategy can highlight relevant molecular factors in specific sperm components. This approach could be easily extended by including other " omics" data (from asthenozoospermic men, for example) and identifying other critical proteins from the human sperm microtubulome. Summary Sentence Although researchers have started to use "omics" techniques to characterize the human sperm's molecular landscape, the constituents responsible for the assembly, organization, and dynamics of the flagellum microtubule have yet to be fully defined.
ISSN: 0006-3363

hal-01515563
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01515563
DOI : 10.1095/biolreprod.116.143479
PUBMED : 28395323

Éditeur(s) : HAL CCSD
Résumé : International audience
Understand the dynamics of the fresh-salt water interface in aquifers is a key issue to comprehend mixing processand to quantity the discharge of nutrients in to coastal areas. In order to go beyond the current knowledge inthis issue an experimental site has been set up at the alluvial aquifer Riera Argentona (Barcelona – Spain). Thesite comprises 16 shallow piezometers installed between 30 and 90 m from the seashore, with depths rangingbetween 15 and 25 meters. The seawater interface is being monitored using several techniques, the combinationof which will help us to understand the spatial and temporal behaviour of the mixing zone and the geochemicalprocesses occurring there. Specially the deepest piezometers are equipped with electrodes in order to performcross-hole electrical resistivity tomography (CHERT). In addition, all piezometers are also equipped with FiberOptic cable to perform distributed temperature measurements. Two single steel armoured fibre optic cable lines ofaround 600m length were installed in all boreholes. The objective is to use the cable both as passive and activetemperature sensor. The first is being done for the continuous monitoring of temperature whereas; the secondprovides a higher temperature resolution used to monitor field experiments.Periodic CHERT measurements are carried out between the piezometer equipped with electrodes, resultingin parallel and perpendicular vertical cross sections of the site resistivity. The position of the fresh-salt waterinterface can be identified due to the resistivity contrast between the saline and fresh water. Preliminary resultsof periodic distributed temperature measurements will be also be used to monitor the position of the mixing zonethanks to the contrast and seasonal temperature changes. Periodic down-hole EC profiles will be used to validatethe method.AcknowledgementsThis work was funded by the projects CGL2013-48869-C2-1 y CGL2013-48869-C2-2-R of the Spanish Government.We would like to thank SIMMAR (Serveis Integrals de Manteniment del Maresme) and the ConsellComarcal del Maresme in the construction of the research site
European Geosciences Union General Assembly 2016
Vienne, Austria

insu-01308757
https://hal-insu.archives-ouvertes.fr/insu-01308757

Éditeur(s) : HAL CCSD Taylor & Francis (Routledge)
Résumé : International audience
The influences of task difficulty (index difficulty: 2-4), input device of different length, range of motion and mode of resistance (joystick or rotorcraft stick), and directions of movement (leftward rightward) on motor patterns in a realistic control situation were examined with a multilevel analysis (joint kinematics and muscular variables, and global task performance). Eight subjects controlled the displacements of a virtual object during a slalom task characterized by a realistic inertial model. Pilots adapted the endpoint kinematic organization to increasing accuracy constraints to preserve task success whatever the device and the direction. However, the rotorcraft stick manipulation remains highly complex in comparison to the joystick due to poorer proprioceptive information, higher inertial constraints, and an asymmetrical muscle control.
ISSN: 0022-2895

hal-01442056
https://hal.archives-ouvertes.fr/hal-01442056
https://hal.archives-ouvertes.fr/hal-01442056/document
https://hal.archives-ouvertes.fr/hal-01442056/file/Fuente%20-%20J%20Motor%20Behav%20-%202013.pdf
DOI : 10.1080/00222895.2013.837424

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
The Maghrebides, Betics and some parts of the Calabrian, NE Sicilian and Tuscan allochtons constitute dismembered fragments of the Alpine belt that resulted from the Cenozoic collision between Africa and Eurasia and the opening of the Western Mediterranean basin. Mineral and whole-rock geochemical analyses have been performed on three distinct outcrops of mantle material from the Edough Massif of NE Algeria, namely the Bou Maiza (BM) gabbros, the La Voile Noire (LVN) amphibolites and the Sidi Mohamed (SM) peridotites. In all samples, Sr isotopes are largely affected by seawater alteration (87Sr/86Sract. > 0.70384 and up to 0.70888) and cannot be used to evaluate the nature of the source reservoirs. SM peridotites display variable depleted mantle Nd isotopic signatures (εNdact. from + 7.0 to + 12.2) and geochemical features suggesting no significant chemical depletion as a result of partial melting and melt extraction (Mg# < 90; slightly LREE-depleted patterns with La/YbN = 0.33-0.39). These rocks are interpreted as parts of the subcontinental lithospheric mantle incorporated into the crustal units of the Edough Massif during the early stages of opening of the Algerian basin. BM gabbros and LVN amphibolites show geochemical signatures indicating derivation from a common Depleted Mantle reservoir (εNd > + 7.9) and are likely cogenetic, but without filiation with the SM peridotites. Pb isotopes indicate a contribution of sediments in the source reservoir, which is attributed to contamination solely by hydrous fluids released from a sedimentary component. This observation, together with a LILE-enrichment, suggests a back-arc basin environment. These results indicate that BM and LVN units were obducted onto the North African margin and subsequently fragmented, probably during doming and exhumation of the lower continental crust of the Edough massif. Doming resulted in opposite movements of the overlying oceanic units, southward for the BM units and northward for LVN amphibolites.
ISSN: 0040-1951

hal-01122777
https://hal.archives-ouvertes.fr/hal-01122777
DOI : 10.1016/j.tecto.2014.03.031

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Diamond-bearing UHP metamorphic rocks witness for subduction of lithospheric slabs into the mantle and their return to shallow levels. In this study we present U–Pb and trace elements analyses of zircon and rutile inclusions from a diamond-bearing garnet megacryst collected in a mélange unit exposed on the northern margin of Africa (Edough Massif, NE Algeria). Large rutile crystals (up to 300 μm in size) analyzed in situ provide a U–Pb age of interpreted as dating the prograde to peak subduction stage of the mafic protolith. Trace element analyses of minute zircons (≤30 μm) indicate that they formed in equilibrium with the garnet megacryst at a temperature of 740–810 °C, most likely during HP retrograde metamorphism. U–Pb analyses provide a significantly younger age of attributed to exhumation of the UHP units. This study allows bracketing the age of UHP metamorphism in the Western Mediterranean Orogen to the Oligocene/early Miocene, thus unambiguously relating UHP metamorphism to the Alpine history. Exhumation of these UHP units is coeval with the counterclockwise rotation of the Corsica–Sardinia block and most likely resulted from subduction rollback that was driven by slab pull.
ISSN: 0012-821X

hal-01622789
https://hal.archives-ouvertes.fr/hal-01622789
DOI : 10.1016/j.epsl.2017.06.043

Éditeur(s) : HAL CCSD American Society for Microbiology
Résumé : International audience
Human leishmaniasis are widely spread diseases with different clinical forms caused by about 20 species within the Leishmania genus. Leishmania species identification is relevant for therapeutic management and prognosis, especially for cutaneous and muco-cutaneous forms. Several methods are available to identify Leishmania species from culture, but they have not been standardized for the majority of the currently described species, with the exception of MultiLocus Enzyme Electrophoresis. Moreover, these techniques are expensive, time-consuming and not available in all laboratories. Within the last decade, mass spectrometry (MS) has been adapted for microorganism identification, including Leishmania However, no commercial reference mass spectral database is available. In this study, a reference mass spectral library (MSL) for Leishmania isolates, accessible through a free web-based application (mass spectral identification, MSI), was constructed and tested. It includes mass spectral data for 33 different Leishmania species, including species that infect humans, animals and phlebotomine vectors. Four laboratories on two continents evaluated MSI performance using 268 samples of which 231 were Leishmania strains. All Leishmania strains, but one, were correctly identified at least at the complex level. A risk of species misidentification within the L. donovani, L. guyanensis and L. braziliensis complexes was observed, as already reported with other techniques. The tested application was reliable, with identification results comparable to those obtained with reference methods, but with a more favorable cost-efficiency ratio. This free online identification system relies on a scalable database and can be implemented directly in the user's computers.
ISSN: 0095-1137

hal-01571305
https://hal.archives-ouvertes.fr/hal-01571305
DOI : 10.1128/JCM.00845-17
PUBMED : 28724559

Éditeur(s) : HAL CCSD National Institute of Environmental Health Sciences
Résumé : International audience
BACKGROUND: Women of reproductive age can be exposed to endocrine-disrupting chemicals (EDCs) at work, and exposure to EDCs in pregnancy may affect fetal growth. OBJECTIVES: We assessed whether maternal occupational exposure to EDCs during pregnancy as classified by application of a job exposure matrix was associated with birth weight, term low birth weight (LBW), length of gestation, and preterm delivery. METHODS: Using individual participant data from 133,957 mother-child pairs in 13 European cohorts spanning births from 1994 through 2011, we linked maternal job titles with exposure to 10 EDC groups as assessed through a job exposure matrix. For each group, we combined the two levels of exposure categories (possible and probable) and compared birth outcomes with the unexposed group (exposure unlikely). We performed meta-analyses of cohort-specific estimates. RESULTS: Eleven percent of pregnant women were classified as exposed to EDCs at work during pregnancy, based on job title. Classification of exposure to one or more EDC group was associated with an increased risk of term LBW [odds ratio (OR) = 1.25; 95% CI: 1.04, 1.49], as were most specific EDC groups; this association was consistent across cohorts. Further, the risk increased with increasing number of EDC groups (OR = 2.11; 95% CI: 1.10, 4.06 for exposure to four or more EDC groups). There were few associations (p < 0.05) with the other outcomes; women holding job titles classified as exposed to bisphenol A or brominated flame retardants were at higher risk for longer length of gestation. CONCLUSION: Results from our large population-based birth cohort design indicate that employment during pregnancy in occupations classified as possibly or probably exposed to EDCs was associated with an increased risk of term LBW.
ISSN: 0091-6765

hal-01405823
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01405823
DOI : 10.1289/EHP208
PUBMED : 27152464