Résumé : Marine capture fisheries in Jamaica is primarily artisanal in nature ansd is conducted maiinly by fishermen operating from canoes. Approximately 95% of these fishermen operate on the coastal shelf and its associated banks. The commercial species harvested comprise bottom-dwelling, coral reef species and free swimming species of finfish. Other fishery resources of commercial value include marine shrimp, conch and lobsters. Catch statistics are not available for all species, but the Department of Fisheries reports a slight decline in fishery production with production decreasing from 16 milion lbs in 1990, despite the fact that fishing efforts have doubled. Over this period the number of registered fishermen has grown from 12 000 to 16 000, al of whom are engaged in full-time fishing. There arealso part-time fishermen who are not registered. The decline in fish catch is accompanied by a decrease in fish size and quality, suggesting that the fisheries are under pressure and have already exceeded optimum production in relation to vailable resources. As a result the economic returns to fishermen are declining. There are also other problems, such as high incidence of conflicts among fishermen at sea, the high cost of purchasing boats, outboard engine fuel, and equipment, with together with the dangers involved in fishing offshore (piracy, and praedial larceny) create serious social ans economic difficulties for fishermen. Notwithstanding, there is an apparent move on the part of the fishermen to leave the industryor to seek alternative forms of employment. In fact, the Department ofFisheries reports that it is still reciving applications for new licences to operate fishing boats. This is probably due to the fact that where the basis of a community is fishing, it becomes difficult to introduce alternative forms of employment, such as cottage industries, village crafts and other trades. In 1987 the Jamaica Department of Fisheries prepared a Management plan which proposed several conservation measures to promote the efficient use of fisheries resources and to control the development of the Fishery in such a way that the country would receive highest benefits. Adequate attention was given to limitations on fishing gear, institution of closed seasons and related legislation. Strategies to diversify the marine fishing were also proposed. The 1990 five year Devlopment Plan for marine fisheries also focuses on proper resource management in order to reverse trends associated with the overexploitation of marine resources. According to the plan, emphasis will be placed on inland fisheries and mariculture in order to reduce pressure on the fisheries. Inland fisheries in the form of freshwater fish fanning has expanded significantly over the past 10 years with production increasing from less than 0,5 million lbs. in 1980 to in excess of 6.0 million lbs. in 1989. However, some freshwater fish farmers are already experiencing serious competition for water usage and, to a lesser extent for land from crop-producing farmers. The Ministry of Agriculture is of the view that marine cage culture technologically has the potential for introduction in Jamaica . This technologyhas been successfully developed in Norway and the technology is currentlty being experimentally utilized in several countries in the area. The technology, if widely utilized in Jamaica, couls significantly reduce pressure on fisheries, making fishing more cost effective and improve the economic returns to fishermen. Already there exist some technical and institutional capabilities in Jamaica to support commercial development of marine cage culture. The Department of Fisheries has highly trained personnel in aquaculture and marine fisherie, some of whom are directly responsible for the success of freshwater fish fanning. In adition, the Marine Laboratory at the Univesity of the West Indies (UWI) is caarying research on hatchery facilities for marine cage farming. The Department of Fisheries will seek the collaboration ofg the marine unit at UWI which could provide fingerlings of selected marine species for cage 1
Les pêcheries de captage marin en Jamaïque sont principalement de nature artisanale et elles sont dirigées principalement par les pêcheurs qui travaillent depuis des canoës. Environ 95 % de ces pêcheurs travaillent sur la plaine côtière et ses bancs associés. Les espèces commerciales récoltées comprennent les espèces benthiques, les espèces de corail et les espèces de poisson marin de nage libre. D'autres ressources de pêcheries de valeur commerciale comprennent la crevette, la conque et le homard. Les statistiques des pêches ne sont pas disponibles pour toutes les espèces, mais le Département des Pêcheries fait état d'une légère réduction de production de pêcheries, la production se réduisant de 16 millions de livres en 1990, en dépit du fait que les efforts de la pêche ont doublé. Sur cette période le nombre de pêcheurs inscrits a augmenté de 12 000 à 16 000, dont tous sont occupés à plein temps à la pêche. Il y a aussi des pêcheurs à mi-temps qui ne sont pas inscrits. La réduction des pêches est accompagnée d'une réduction de la taille et la qualité des poissons, ce qui implique que les pêcheries sont sous pression et qu'elles ont déjà dépassé la production optimum par rapport aux ressources disponibles. En conséquence, les rendements pour les pêcheurs sont en baisse. Il y a aussi d'autres problèmes, tels qu'un taux élevé de conflits entre les pêcheurs en mer, le coût élevé pour acheter les bateaux, le combustible pour les moteurs hors-bord, et le matériel, ainsi que les dangers impliqués dans la pêche offshore (le piratage, et le vol prédial) ont créé de graves problèmes sociaux et économiques pour les pêcheurs. Néanmoins, il y a une tendance évidente chez les pêcheurs de quitter l'industrie ou de chercher du travail dans d'autres domaines. En fait, le Département des Pêcheries signale qu'il continue de recevoir des demandes de nouveaux permis pour opérer les bateaux de pêche. Ceci est probablement attribuable au fait que là où la base d'une communauté est la pêche, il est difficile d'y introduire des formes alternatives de travail, telles que l'industrie artisanale, l'artisanat de village ou d'autres métiers. Le Département des Pêcheries de la Jamaïque a préparé en 1987 un Projet de gestion qui proposait plusieurs mesures de conservation afin d'encourager l'utilisation efficace des ressources des pêcheries et de contrôler le développement de la Pêcherie de manière que le pays touche le plus de bénéfices. Une attention adéquate a été prêtée aux limitations sur les engins de la pêche, l'établissement de saisons de clôture et les législations associées. Des stratégies pour diversifier la pêche marine ont aussi été proposées. Le Plan de développement quinquennal de 1990 pour les pêcheries marines met l'accent aussi sur la gestion de ressources appropriée afin de faire reculer les tendances associées à la surexploitation des ressources marines. Selon le plan, l'accent sera mis sur les pêcheries intérieures et la mariculture afin de réduire la pression sur les pêcheries. Les pêcheries intérieures, sous la forme de l'élevage de poissons en eau douce, ont pris leur essor sur les 10 dernières années avec une production qui s'est élevée de moins de 0,5 millions de livres en 1980 pour atteindre en 1989 plus de 6.0 millions de livres. Cependant, certains pisciculteurs en eau douce expérimentent déjà une concurrence sérieuse avec les agriculteurs pour l'usage de l'eau et, dans une moindre mesure, de la terre. Le Ministère de l'Agriculture est de l'avis que l'élevage en cage marine a technologiquement le potentiel d'être introduit en Jamaïque. La technologie a été développée avec réussite en Norvège et plusieurs pays dans la région utilisent actuellement la technologie expérimentalement. La technologie, si elle était utilisée en Jamaïque, pourrait réduire de façon significative la pression sur les pêcheries, ce qui rendrait la pêche plus économique et améliorerait les rendements aux pêcheurs. Certaines capacités techniques et institutionnelles existent déjà en Jamaïque qui pourraient soutenir le développement de l'élevage en cage marine. Le Département des Pêcheries a un personnel bien formé en aquaculture et pêcherie marine, dont certains qui sont directement responsables du succès de la pisciculture en eau douce. Par ailleurs, le Laboratoire Marin à l'Université des Antilles (UWI) mène des recherches sur les installations d'écloseries pour l'élevage en cage marine. Le Département des Pêcheries demandera la collaboration de l'unité marine à l'UWI qui pourra fournir des saumoneaux d'espèces marines sélectionnées pour la cage 1.

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/1993/rapport-1918.pdf
http://archimer.ifremer.fr/doc/00000/1918/

Éditeur(s) : Public Library Science
Résumé : Observing spatial and temporal variations of marine biodiversity from non-destructive techniques is central for understanding ecosystem resilience, and for monitoring and assessing conservation strategies, e.g. Marine Protected Areas. Observations are generally obtained through Underwater Visual Censuses (UVC) conducted by divers. The problems inherent to the presence of divers have been discussed in several papers. Video techniques are increasingly used for observing underwater macrofauna and habitat. Most video techniques that do not need the presence of a diver use baited remote systems. In this paper, we present an original video technique which relies on a remote unbaited rotating remote system including a high definition camera. The system is set on the sea floor to record images. These are then analysed at the office to quantify biotic and abiotic sea bottom cover, and to identify and count fish species and other species like marine turtles. The technique was extensively tested in a highly diversified coral reef ecosystem in the South Lagoon of New Caledonia, based on a protocol covering both protected and unprotected areas in major lagoon habitats. The technique enabled to detect and identify a large number of species, and in particular fished species, which were not disturbed by the system. Habitat could easily be investigated through the images. A large number of observations could be carried out per day at sea. This study showed the strong potential of this non obtrusive technique for observing both macrofauna and habitat. It offers a unique spatial coverage and can be implemented at sea at a reasonable cost by non-expert staff. As such, this technique is particularly interesting for investigating and monitoring coastal biodiversity in the light of current conservation challenges and increasing monitoring needs.
Plos One (1932-6203) (Public Library Science), 2012-02 , Vol. 7 , N. 2 , P. -

Droits : 2012 Pelletier et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License
http://archimer.ifremer.fr/doc/00078/18879/16453.pdf
DOI:10.1371/journal.pone.0030536
http://archimer.ifremer.fr/doc/00078/18879/

Éditeur(s) : Université des Antilles et de la Guyane
Résumé : The need for an integrated approach to fisheries is now widely affirmed, including the FAO, in particular in the context of tropical artisanal fisheries. These small-scale fisheries, often multispecies are very important in terms of production, employment and food security. However these fisheries and the exploited resources are often characterized by a lack of data making difficult their management within an ecosystem approach, and by the ecological and economic system complexities including trophic and technological interactions. This thesis aims to contribute to the development of bioeconomic tools for small tropical fisheries in a sustainable management perspective based on the ecosystem approach. In this perspective, the French Guiana coastal fishery constitutes an interesting case study. The thesis proposes multi-criteria evaluations, complex bioeconomic models and viable management scenarios for this fishery. At first, multivariate statistical analysis suggests a satisfactory overall status of the fishery in terms of sustainability. However, some performance differences are noted within the fishery, particularly at border areas. Also, management improvements are proposed. Then, through bioeconomic modeling, projections of different fishing scenarios show that, in the long-term, the current exploitation level may not be consistent with the future increase of local demand and a loss of biodiversity may occur. A scenario called "co-viability" reconciling ecological, economic and social objectives, with a high probability of achievement is exhibited. Finally, the comparison of optimal behavior in cooperative and non-cooperative conditions, confirms that harvest levels are greater when actors do not cooperate. Furthermore, it is shown that the state of the ecosystem depends on the fishing strategies and the type of interaction between species. Beyond the diagnosis made for the case study, the method is promising in the context of small tropical fisheries, while the co-viability approach allows finding the exploitation conditions under which ecological and socio-economic sustainability are meet, what the conventional fisheries management generally do not allow.
La nécessité d’une approche intégrée des pêches est actuellement largement affirmée, notamment par la FAO, en particulier dans le contexte des pêcheries artisanales tropicales. Ces pêcheries à petites échelles, souvent multi-spécifiques sont très importantes en termes d’emploi et de production, y compris pour la sécurité alimentaire. Néanmoins ces pêcheries et la biodiversité exploitées sont souvent marquées, d’une part, par le manque de données rendant difficile leur gestion dans le cadre d’une approche écosystémique, d’autre part, par la complexité des systèmes écologiques et économiques sous-jacents incluant interactions trophiques et techniques. Cette thèse contribue à la mise au point d’outils bioéconomiques adaptés aux petites pêcheries tropicales dans la perspective d’une gestion durable des pêches fondée sur l’approche écosystémique. Dans cette perspective, la pêcherie côtière en Guyane Française constitue un cas d’étude particulièrement fécond. La thèse propose ainsi des évaluations multi-critères, des modèles bioéconomiques complexes et des scénarios de gestion viable pour cette pêcherie. Dans un premier temps l’analyse statistique multivariée suggère un statut global satisfaisant de la pêcherie en termes de durabilité. Cependant des différences de performance sont notées au sein de la pêcherie, notamment au niveau des zones frontalières. Aussi des améliorations dans le mode de gestion sont proposées. Ensuite, à travers la modélisation bioéconomique, les projections des différents scénarios de pêche montrent qu’à long terme le niveau d’exploitation actuel peut ne pas être en adéquation avec la future augmentation de la demande locale et qu’une perte de biodiversité peut avoir lieu. Un scenario dit de "co-viabilité" conciliant des objectifs à la fois écologique, économique et social, avec une probabilité de réalisation satisfaisante, est mis en exergue. Enfin, la comparaison des comportements optimaux en situation coopératif et non coopératif, montre dans quelle mesure la viabilité est favorisée quand les acteurs coopèrent. Au-delà du diagnostic apporté pour le cas d’étude, la méthode utilisée s’avère prometteuse dans le contexte des petites pêcheries tropicales, tandis que l’approche de co-viabilité permet de trouver les modalités d’exploitation dans le cadre de compromis entre durabilité écologique et socio-économique, ce que les principes de gestion halieutiques traditionnels ne permettent généralement pas.

Droits : 2013 Université des Antilles et de la Guyane
http://archimer.ifremer.fr/doc/00144/25492/23646.pdf
http://archimer.ifremer.fr/doc/00144/25492/

Éditeur(s) : HAL CCSD Société géologique de France
Résumé : A study combining very high resolution seismic and sediment core data has been carried out on the Thau lagoon (Mediterranean coast, microtidal setting, SE France) in order to understand more clearly the dynamics and Holocene chronology of its closure through the different stages of its filling. One main seismic unit (U2) has been defined into the infill, above the rocky basement (U0) and a composite unit U1, which is interpreted as remnants of Pleistocene fluvial terraces or/and to early marine Holocene deposits. Unit U2, that reaches locally 9 m in thickness, rests conformably on U1 in the central part of the lagoon and onlaps U0 or U1 close to the edge of the lagoon. It is divided in two sub-units, U2-1 and U2-2. U2-2 rests paraconformably on U2-1 in the central part of the lagoon where the infill is the thickest, while a marked erosional unconformity is observed between U2-1 and U2-2 on topographic highs of the basement and on the seaward edge of the lagoon. A total of seven elementary sequences have been observed in U2-1 and U2-2.;According to core data, U2 consists in a series of mud-dominated sequences, with shell fragments dispersed at the base. The vertical distribution of the fauna into U2-1 and U2-2 reveals a lagoonal environment. However in U2-1, marine species are more abundant in the south of the lagoon. C-14 AMS dating provides three ages: similar to 6000 cal yr B.P. in the lower part of U2-1 on CAL1, 5400 cal yr B.P. just above the boundary between U2-1 and U2-2 on CAL4, similar to 3000 cal yr B.P. in the middle of U2-2 on CAL4.;A scenario to explain the lagoon infill stratigraphy and geometry is proposed. The beginning of the lagoon infill occurred with the initiation of the barrier construction, as soon as the sea-level rise slowed down significantly, i.e. between 7000-6000 yr B.P. The sediment-fill began into the back-barrier system, with a high rate of sedimentation for U2-1, according to the radiocarbon data. At 5400 yr B.P., the barrier is assumed to be totally closed leading to the deposition of the fully lagoonal U2-2 succession. The unconformity between U2-1 and U2-2 is interpreted as the result of a rapid landward retreat of the barrier. This severe retreat could be related to climate forcing and/or brutal change in sediment discharge driven by the Rhone River, which is the main sediment source of the longshore drift. In this scenario, the last sub-unit, U2-2, represents most of the late Holocene infill. In this framework, the elementary sequences observed in U2-2 could be related to high frequency climate changes of about 1000-1500 years periodicity according to C-14 dates.
EISSN: 1777-5817

hal-00486386
https://hal.archives-ouvertes.fr/hal-00486386
DOI : 10.2113/gssgfbull.181.2.197

Éditeur(s) : Pêche thonière et dispositifs de concentration de poissons, Caribbean-Martinique, 15-19 Oct 1999 15-19 octobre 1999
Résumé : Since the early 1990s, drifting Fish Aggregating Devices, or FADs, have rapidly become the dominant type of floating object used by the purse seine fishery in the Eastern Pacific Ocean to capture tunas. The development of this fishery for larger vessels is described using data collected by observers aboard vessels of more than 363 metric tons fish-carrying capacity. Bamboo rafts, equipped with radio-transmitters that allow for semi-continuous monitoring, are typically used as FADs. Old purse seine netting is often suspended below the bamboo raft to give the FAD an enhanced underwater profile. Similar to the fishery on flotsam between 1992-1998, most sets on FADs were made before 8 am, with skipjack and bigeye being the dominant tuna species caught, and yellowfin tuna captured in lesser amounts. Discard ratios of skipjack and bigeye were comparable for the two modes of fishing; however, the success rate on FADs for bigeye was more than twice that on non-FAD floating objects ("logs"). In addition, the fishery on logs was largely a coastal hshery, while the fishery on FADs extended west to 150 W, into areas that had not been significantly utilized by the purse seine fleet. The capture of tunas per set varied most with area, season and year. Nonetheless, capture per set for at least one of the three tuna species was also found to vary with the depth of the purse seine net and the amount of the netting hanging below the FAD. The effect of net depth and FAD depth on tuna capture varied by area, season and FAD color.

Droits : Ifremer
http://archimer.ifremer.fr/doc/00042/15282/12668.pdf
http://archimer.ifremer.fr/doc/00042/15282/

Éditeur(s) : HAL CCSD Public Library of Science
Résumé : International audience
Outbreaks of the corallivorous crown-of-thorns seastar Acanthaster planci (COTS) represent one of the greatest disturbances to coral reef ecosystems in the Indo-Pacific, affecting not only coral reefs but also the coastal communities which rely on their resources. While injection approaches are increasingly used in an attempt to control COTS densities, most of them display severe drawbacks including logistical challenges, high residual environmental impacts or low cost-effectiveness. We tested a new alternative control method based upon acidic injections of cheap, 100% natural products. We investigated the lethal doses, intra-and inter-specific disease transmission and immune responses of COTS when injected with fresh lime juice (extracted from local Citrus arantifolia) and white spirit vinegar. High COTS mortality was achieved with small volumes: 10–20 ml per seastar induced death in 89%/ 97% of injected specimens after an average 34.3 h/29.8 h for lime juice and vinegar respectively. Highest efficiency was reached for both solutions with double shots of (2 × 10 ml) in two different areas on the body: 100% mortality occurred within 12–24 h, which is similar or faster compared with other current injection methods. Multiple immune measures suggested that death was very likely caused by pH stress from the acidic solutions rather than a bacterial infection. Contagion to either conspecifics or a variety of other reef species was not observed, even at COTS densities 15 times higher than the highest naturally reported. 10 to 20 l lime juice/vinegar could kill up to a thousand COTS at a cost of less than 0.05 USD per specimen; no permits or special handling procedures are required. We conclude that injections of lime juice and vinegar offer great advantages when compared to current best practises and constitute a cheap and natural option for all reefs affected by COTS.
ISSN: 1932-6203

Droits : http://creativecommons.org/licenses/by/
hal-01208272
https://hal-univ-perp.archives-ouvertes.fr/hal-01208272
https://hal-univ-perp.archives-ouvertes.fr/hal-01208272/document
https://hal-univ-perp.archives-ouvertes.fr/hal-01208272/file/journal.pone.0137605.pdf
DOI : 10.1371/journal.pone.0137605

Éditeur(s) : Communication, ICES Conference and Meeting (CM), 2010, Nantes
Résumé : Chlordecone is a very persistent insecticide used in banana plantations of the French West Indies between 1972 and 1993. Chlordecone residues were found in inland water, in agricultural and freshwater products, and in marine organisms. This pollution has become of great concern in 2007. Therefore, a governmental action Plan was launched to better assess the pollution and to improve the consumer’s protection. Within this plan, 1048 samples from 69 different species of marine fishes and crustaceans were collected all around both the Guadeloupe and the Martinique Islands and analyzed. The results confirm the presence of chlordecone in marine organisms, with highly variable concentrations (from the detection limit to 1000 μg.kg-1). In 17.9 % of the samples, concentrations exceeded 20 μg.kg-1, the maximum acceptable level in fish according to the French regulation (Anon, 2008). Two main features of this contamination were characterized. 1) Because of the sedimentation of contaminated suspended soil particles, the sheltered bays are more exposed to chlordecone than the open coast where terrigenous flux are dispersed. 2) Species biology, particularly their lifestyle and diet, appear to influence contamination levels. Thus, the more contaminated species live in relation with sediment or are at high trophic level. These results have directly supported political decisions in order to prevent too high exposure of consumers to chlordecone. Fishing activities in sheltered bays have been forbidden for potentially highly contaminated species like benthic crustaceans and top predators. Further studies are under way to assess the importance of the trophic transport of chlordecone within the foodweb, and to evaluate the historical deposition of this insecticide in sediment and its further bioavailability.

Droits : 2010 ICES/CIEM ; Ifremer
http://archimer.ifremer.fr/doc/00014/12511/9361.pdf
http://archimer.ifremer.fr/doc/00014/12511/

Éditeur(s) : Elsevier
Résumé : During the present study, we aimed at providing a first look at the elemental composition of the early stages of cephalopods as an approach to their elemental requirements in culture. Essential and non-essential elemental profiles of the European cuttlefish Sepia officinalis, the European squid Loligo vulgaris and the common octopus Octopus vulgaris laboratory hatchlings and wild juveniles were analysed. In addition, for O. vulgaris we determined elemental profiles of mature ovary, eggs in different stages of development and followed possible effects of four dietary treatments during paralarval rearing, also analyzing elemental content of the live preys Artemia nauplii and Maja brachydactyla hatchling zoeae. Content was determined for essential (As, Ca, Cr, Co, Cu, Fe, K, Mg, Mn, Na, Ni, P, Rb, S, Sr, Zn) and non-essemial (Ag, Al, Ba, Cd, Hg, Pb) elements. The content in non-essential elements found in hatchlings and juveniles of the three species analyzed here seems to be far lower in comparison with subadult and adult stages of coastal cephalopods. In the octopus eggs, the non-essential element concentrations remained globally low compared to hatchlings and juveniles indicating the absorption of these elements along the ontogenefic development. The elemental composition of the octopus ovary and of the eggs, hatchlings and juveniles of the three cephalopod species analyzed here showed a high content in S. As expected, the calcified internal shell of the cuttlefish, rich in Ca and Sr, originates the main difference between species. It is remarkable the richness in Cu of hatchling octopus, that may indicate a particular nutritional requirement for this element during the planktonic life. The reared octopus paralarvae feed on Artemia nauplii, a prey with relatively low Cu content, showed nearly half Cu content that the "natural" profile of octopus hatchlings or wild juveniles. This suggests a dietary effect and/or an indication of the poor physiological stage of the Artemia-fed paralarvae. At the present, the percentage of essential element absorption by food or seawater is unknown for cephalopods and should be determined in the future to understand their feeding requirements in culture. (c) 2006 Elsevier B.V. All rights reserved.
Aquaculture (0044-8486) (Elsevier), 2006-11 , Vol. 261 , N. 1 , P. 225-240

Droits : 2006 Elsevier B.V. All rights reserved
http://archimer.ifremer.fr/doc/2006/publication-2183.pdf
DOI:10.1016/j.aquaculture.2006.07.006
http://archimer.ifremer.fr/doc/00000/2183/

Éditeur(s) : Actes de Colloque: Avancées et nouvellles technologies en toxinologie, éditeurs: Julien BARBIER, Evelyne BENOIT, Pascale MARCHOT, César MATTEI, Denis SERVENT
Résumé : Over the past seven years, methods available for the detection of phycotoxins have been extensively reviewed in a number of international expert committees, such as the consultations organised by FAO/IOC/WHO and EFSA, as well as by individual scientists. These reviews have shown that the methods available have severe limitations for the use in official control, either due to their limited scope and detection capability or due to a lack of calibration standards, reference materials and validation efforts. The present review focuses on recent developments in the detection of phycotoxins in several areas of applied research. Not being able to exhaustively describe all recent developments, the review focussed on three areas of interest to the authors: (i) detection of ultra-trace amounts of toxins, (ii) metabolism of toxins and their localisation in biological tissues, and (iii) approaches to detect unknown toxins or analogues of known toxins. Miniaturisation in combination with physico-chemical techniques appears to be a very efficient approach to detect low trace amounts of individual toxin analogues. In particular, the detection of azaspiracids and okadaic acid and analogues, using micro-filtration and on-line pre-concentration techniques, has shown to be useful for the characterisation of various algal and shellfish species. In the area of interactions of toxins with shellfish and mammalian systems, it is noted that several studies on biomarkers reveal either protein biomarkers of exposure to toxins or potential pathways of metabolism of the toxins themselves. A particular focus is given to recent findings in the areas of brevetoxin metabolism and biomarkers as well as azaspiracid localisation and metabolism. Finally, the detection of novel compounds is a particularly challenging area. The interest in this area has risen over the past years following cases of unexplained mouse toxicity such as the UK cockle toxicity and the French atypical toxicity in mussels and oysters from the Atlantic and Mediterranean coasts. Some attention is given to immuno-, functional and cellular bio-assays for the identification of bioactive agents in shellfish.
Durant les sept dernières années, les méthodes disponibles pour la détection des phycotoxines ont été abondamment revues dans de nombreux groupes internationaux d’expertises, tels que les consultations organisées par FAO/IOC/WHO et EFSA ainsi que dans de nombreux articles scientifiques de synthèse. Ces revues ont démontré que, vis-à-vis des systèmes de régulations officiels, les méthodes disponibles présentent des limites d’utilisation importantes. Soit elles ont un périmètre réduit et des limites de détection trop élevées, soit il y a un manque d’étalons, de matériaux de référence ou d’efforts de validation. La présente revue focalise sur les développements récents dans la détection de phycotoxines en recherche appliquée. Sans vouloir décrire de manière exhaustive tous les développements récents, la revue examine trois domaines d’intérêt pour les auteurs : (i) la détection de quantités ultra-traces de toxines, (ii) la métabolisation et la localisation des toxines dans des tissus biologiques, et (iii) les approches pour la détection de toxines non-répertoriées ou des analogues de toxines connues. La miniaturisation en combinaison avec les techniques physico-chimiques constitue apparemment une approche efficace pour la détection de faibles traces d’analogues individuels des toxines. En particulier, la micro-filtration et des techniques de pré-concentration en ligne se sont montrées utiles pour la détection des azaspiracides et des toxines du groupe de l’acide okadaïque dans la caractérisation de diverses espèces d’algues et de coquillages. Dans le domaine des interactions des toxines avec les coquillages et des systèmes vivants de mammifères, nous avons noté que plusieurs études sur les bio-marqueurs révèlent soit des marqueurs protéiniques d’exposition aux toxines, soit des marqueurs du métabolisme des toxines elles-mêmes. Un intérêt spécifique a été trouvé dans les résultats d’étude sur le métabolisme des brévétoxines et des azaspiracides. La détection des composés bioactifs non-répertoriés constitue un défi particulièrement difficile. Ce domaine a trouvé plus d’intérêt dû à plusieurs cas de toxicités inexpliquées dans le test souris telles que les toxicités observées dans les coques en provenance de Grande-Bretagne ou encore dans les moules et huîtres des côtes méditerranéennes et atlantiques françaises. Une attention particulière a été consacrée à l’identification d’agents bioactifs par les essais cellulaires ou fonctionnels ou basés sur la détection immuno-chimique.

Droits : 2010 SFET
http://archimer.ifremer.fr/doc/00019/12975/9949.pdf
http://archimer.ifremer.fr/doc/00019/12975/

Éditeur(s) : Soc Francaise D Ichtyologie
Résumé : Age is a necessary parameter used in population dynamics to assess the state of exploited resources. This parameter is poorly known for most deep-sea species (depth > 400 m). This work focused on age estimation from otoliths of Alepocephalus bairdii (Alepocephalidae), Coryphaenoides rupestris (Macrouridae), Helicolenus dactylopterus (Sebastidae) and Hoplostethus atlanticus (Trachichthyidae), which French fishery exploitation, off the west coasts of the British Isles, began the late 1980's. Considering otolith growth zones as annual, the four species all show high longevity: 38, 54, 43 and 130 years, respectively, together with slow growth. The differences in growth between sex were estimated and difficulties in accurately estimating the age were highlighted and showed the need to standardise and validate age estimation. The ages currently estimated for deep-sea fish must be used with caution.
Cybium (0399-0974) (Soc Francaise D Ichtyologie), 2000 , Vol. 24 , N. 3 , P. 7-16

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/00000/10396/7690.pdf
http://archimer.ifremer.fr/doc/00000/10396/

Éditeur(s) : Conseil International pour l'Exploration de la Mer (CIEM), C. M. 1975/K: 21
Résumé : Following our aim of developing oyster culture in French Guyana and studying the different options available to increase a stock of new oyster species, we were lead to search for possible parasites in Crassostrea rhizophorae. These oysters from the French Guyanese coasts host some gregarine Nematopsis sp. spores, characterized by Comps, Grizel and Tige (1972). Through this work, we conducted some experimental infestation trials between Crassostrea rhizophorae spats parasited by these spores and the most common crab on metropolitan farms Carcinus maenas.
Poursuivant les objectifs de développement de l'ostréiculture en Guyane et étudiant les possibilités d'accroissement d'un stock constitué de nouvelles espèces d'huîtres, nous avons été amenés à rechercher d'éventuels parasites chez Crassostrea rhizophorae. Ces huîtres des côtes de la Guyane française abritent des spores de Grégarines, Nematopsis sp. mises en évidence par COMPS, GRIZEL et TIGE (1972). Au cours de ce travail nous avons réalisé des essais d'infestations expérimentales entre du naissain de Crassostrea rhizophorae parasité par ces spores et le crabe le plus répandu sur les parcs à huîtres métropolitains, Carcinus maenas.

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/1975/acte-6290.PDF
http://archimer.ifremer.fr/doc/00000/6290/

Résumé : This catalogue deals mainly with common phytoplanktonic species found in the Channel. It is part of a bibliographical survey on pelagos and benthos. The main idea was to gather the largest possible amount of data on the eco-physiology of each species. To do so, studies were conducted in the main marine region where the species had been found and analysed. We focused on several reference ecological studies conducted in the coastal Channel, on the E.D.F. sites, by the C.N.E.X.O., the I.S.T.P.M. and some university laboratories. A great attention was also paid to the studies on seasonal cycles carried out in laboratories in Plymouth, Helgoland and in the Irish zones. (unverified OCR)
Ce catalogue se rapporte essentiellement aux espèces phytoplanctoniques les plus courantes et abondantes en Manche; il s'insère dans une synthèse bibliographique générale concernant le pélagos et le benthos. Nous nous sommes proposés de rassembler le plus grand nombre de données sur l'éco-physiologie de chaque espèce. Pour ce faire, les recherches se sont déroulées dans les principales régions maritimes où l'espèce avait été rencontrée et étudiée. Plus particulièrement, notre attention s'est portée sur les études écologiques de référence effectuées en Manche Littorale sur les sites E.D.F. par le C.N.E.X.O., l'I.S.T.P.M, et les laboratoires universitaires; d'importance aussi, furent les études de cycles saisonniers effectuées au laboratoire de Plymouth, d'Helgoland, et dans les zones irlandaises. OCR NON CONTROLE

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/1984/rapport-3701.pdf
http://archimer.ifremer.fr/doc/00000/3701/

Éditeur(s) : Wiley-blackwell
Résumé : Marine bacteria are a rich source of bioactive metabolites. However, the microbial diversity of marine ecosystem still needs to be explored. The aim of this study was to isolate and characterize bacteria with antimicrobial activities from various marine coastal environment of New Caledonia. We obtained 493 marine isolates from various environments and samples of which 63 (12.8%) presented an antibacterial activity against a panel of reference pathogenic strains (Staphylococcus aureus, Pseudomonas aeruginosa, Escherichia coli and Enterococcus faecalis). Ten out of the most promising strains were cultured, fractionated and screened for antibacterial activity. Four of them (NC282, NC412, NC272 and NC120) showed at least an activity against reference and multidrug-resistant pathogenic strains and were found to belong to the genus Pseudoalteromonas, according to the 16S phylogenetic analysis. The NC282 strain does not belong to any described Pseudoalteromonas species and might be of interest for further chemical and biological characterization. These findings suggest that the identified strains may contribute to the discovery for new sources of antimicrobial substances to develop new therapies to treat infections caused by multidrug-resistant bacteria.
Letters In Applied Microbiology (0266-8254) (Wiley-blackwell), 2014-02 , Vol. 58 , N. 2 , P. 102-108

Droits : 2013 The Society for Applied Microbiology
http://archimer.ifremer.fr/doc/00174/28552/26994.pdf
DOI:10.1111/lam.12162
http://archimer.ifremer.fr/doc/00174/28552/

Éditeur(s) : Soc Francaise D Ichtyologie
Résumé : A total of 664 Boops Boops (Linnaeus, 1758) and 823 Mullus barbatus barbatus Linnaeus, 1758 from the east coast of Algeria were examined to study their parasitofauna. We collected eleven parasitic species (two monogeneans, three copepods, five isopods and one Branchiura) from B. boops, and four parasitic species (two copepods and two isopods) from M. barbatus barbatus. Five species were reported for the first time in Algeria. The site of attachment on the host and the degree of specificity varied according to the parasite species while the infestation rate changed according to the month and the host size. The parasitism did not show a significant negative impact on the biological parameters of the fish host.
Au total, 664 Boops Boops (Linnaeus, 1758) et 823 Mullus barbatus barbatus Linnaeus, 1758 capturés le long du littoral Est de l’Algérie ont été examinés afin d’étudier leur parasitofaune. Sur B. boops, nous avons récolté 11 espèces d’ectoparasites (deux monogènes, trois copépodes, cinq isopodes et un Branchioura), et quatre espèces sur M. barbatus barbatus (deux copépodes et deux isopodes). Parmi les 14 ectoparasites identifiés, cinq ont été récoltés pour la première fois en Algérie. Le site d’attache sur l’hôte et le degré de spécificité étaient différents selon les espèces de parasites. Le taux d’infestation variait selon le mois et la taille de l’hôte. Le parasitisme n’a induit aucun impact négatif significatif sur les paramètres biologiques des poissons hôtes.
Cybium (0399-0974) (Soc Francaise D Ichtyologie), 2013-04 , Vol. 37 , N. 1-2 , P. 59-66

Droits : 2013 Société Française d'Ichtyologie
http://archimer.ifremer.fr/doc/00148/25901/23918.pdf
http://archimer.ifremer.fr/doc/00148/25901/

Éditeur(s) : ISTPM
Résumé : From February to June 1951 the "Président-Théodore-Tissier" sailed all the way to the French Caribbean, via Madeira, then to the coasts of Nova Scotia, on the banks of Newfoundland, via the Bermudas, and back to Lorient via the Azores Islands. During this cruise, an important material was sampled by A. Bourdillon, Research Attaché in the Marine Station of Endoume and invited by the Scientific and Technical Institute of Marine Fisheries. Ascidians form the greatest share of this material. They can be grouped in four batches: French Caribbean, Bermudas, Nova Scotia, and Newfoundland. But the French Caribbean batch and that of Newfoundland are by far the most interesting, considering the number and variety of the species they hold. From a geographic point of view, only two groups are worth being studied: 1° The French Caribbean batch which contains only tropical species, to which can be linked the Bermudas batch, islands which although located at a high latitude benefit from a subtropical hydrological regime. 2° The Newfounland batch, which has a cold character, and to which can be linked the Nova Scotia batch.
Pendant la période allant du mois de février au mois de juin 1951 le « Président-Théodore-Tissier » a effectué une longue croisière qui, par Madère, l'a mené jusqu'aux Antilles françaises, puis par les Bermudes et les côtes de Nouvelle-Ecosse sur les bans de Terre-Neuve, le cheminl du retour ver Lorient passant par les Açores. Durant cette campagne, un matériel important a été prélevé par A. Bourdillon, attaché de Recherche à la station Marine d'Endoume, invité par l'lnstitut Scientifique et technique des Pêches maritimes pour participer à la croisière. [OCR NON CONTRÔLE] Les ascidies constituent une part importante de ce matériel. Elles peuvent se répartir en quatre lots : Antilles françaies, Bermudes, Nouvelle-Ecosse, Terre-Neuve. Mais le lots de Antilles Française principalement et celui de Terre-Neuve sont de beaucoup les plus intéressants par le nombre et la variété des espèces qu'ils renferment. Du point de vue géographique, deux groupes seulement sont à considérer : 1° Le groupe des Antilles françaises ne renfermant que des espèces de caratères tropical et auquel on peut rattacher le groupe des Bermudes, îles qui malgré leur latitude assez élevée bénéficient d'un régime hydrologique subtropical. 2° Le groupe de Terre-Neuve à caractère froid auquel se rattache le groupe de Nouvelle Ecosse. ATTENTION : Ce texte a été extrait du document par un processus automatique, non contrôlé, de reconnaissance optique de caractères (OCR). Il est donc susceptible de comporter des erreurs. En cas de doute, consultez le fichier PDF.
Revue des Travaux de l'Institut des Pêches Maritimes (0035-2276) (ISTPM), 1955-12 , Vol. 19 , N. 4 , P. 612-631

Droits : Ifremer
http://archimer.ifremer.fr/doc/1955/publication-6613.pdf
http://archimer.ifremer.fr/doc/00000/6613/

Éditeur(s) : Elsevier
Résumé : The present work is based on a set of bottom trawl surveys performed in the Gulf of Lions between 1983 and 1992. A new method which couples the STATIS multitable approach with the logic of correspondence analysis (CoA) is proposed to study the stability of spatial organization of demersal assemblages in terms of species composition. This CoA version of STATIS has provided a clear representation of the stable part of the spatial structure of the assemblages. In addition, it gave an insight into the interannual variations of the distribution of each population around the reference structure. Our results showed that the demersal assemblages of the Gulf of Lions exhibited strong spatial structuring, mainly orientated along a bathymetric gradient. This gradient is structured around three major regions: the coast, the continental shelf and the continental slope. Despite sampling variations that occurred during the course of the study, the analysis showed a high degree of reproducibility for this spatial pattern. With the exception of Mullus surmuletus, the species considered in this investigation exhibit limited variations in their spatial distribution. Finally, in the absence of log-books covering the activities of commercial fishing vessels, these findings constitute a base of reference for the analysis of the dynamics of fishing fleets exploiting the demersal resources of the Gulf of Lions.
Ce travail porte sur une série de campagnes de chalutage de fond réalisé dans le golfe du Lion entre 1983 et 1992. Une nouvelle méthode fondée sur le couplage de la technique multitableaux STATIS et de l'analyse factorielle des correspondances (AFC) est proposée afin d'étudier l'organisation spatio-temporelle des assemblages démersaux, poissons et quelques céphalopodes, en terme de composition spécifique. Cette version AFC de STATIS a fourni une représentation claire de la part stable de l'organisation spatiale des assemblages. De plus, elle nous a permis d'appréhender les variations interannuelles de la distribution de chaque population autour de la structure de référence. Nos résultats montrent que les assemblages démersaux du golfe du Lion présentent une forte structuration spatiale, principalement orientée selon un gradient bathymétrique. Ce dernier est structuré en trois grandes régions: la côte, le plateau continental et le talus continental. En dépit des variations d'échantillonnage survenues au cours de la période d'étude, l'analyse a mis en évidence une forte reproductibilité de ce schéma d'organisation. A l'exception de Mullus surmuletus, les espèces considérées dans ce travail présentent des variations limitées de leur distribution spatiale. Enfin, en l'absence de livres de bord sur l'activité des navires professionnels, ces résultats constituent une base de référence pour l'analyse de la dynamique des flottilles exploitant les ressources démersales dans le golfe du Lion.
Aquatic Living Resources (Elsevier), 1998-03 , Vol. 11 , N. 2 , P. 75-85

Droits : 1998 Published by Elsevier SAS
http://archimer.ifremer.fr/doc/1998/publication-875.pdf
DOI:10.1016/S0990-7440(98)80063-6
http://archimer.ifremer.fr/doc/00000/875/

Éditeur(s) : Gauthier-Villars
Résumé : The fish assemblages of two artificial reef systems of the south coast of Algarve (Portugal) are presented, and a comparative study is made of their species richness variation according to their location off the Ria Formosa lagoon. Each system consists of a protection reef and an exploitation reef. Gillnets, traps, longline and visual census were used as sampling techniques. Both reefs showed similar species richness, in each case higher than that of Ria Formosa. No significant differences of species richness were found between the reef systems (p = 0.1). However, the exploitation reefs showed a significant difference of species richness, that was more evident when accumulated species richness was used to compare them (p = 0.01).
Oceanologica Acta (0399-1784) (Gauthier-Villars), 1996 , Vol. 19 , N. 1 , P. 89-97

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/00096/20764/18390.pdf
http://archimer.ifremer.fr/doc/00096/20764/

Résumé : Until 1960, the Black scallop Chlamys varia was relatively abundant along the French Atlantic coasts. Today most of these natural beds have disappeared. Because mollusc hatchery and nursery techniques have been mastered, the reintroduction of this species, under control, was carried out in several areas and particularly in the bay of Arcachon, from 1989 to 1992. Good results were obtained in hatchery and nursery but the development of the juveniles in the natural fields was poor. The growth of Chlamys varia was satisfactory but heavy mortalities were rapidly recorded which could not be related to the hydrobiological conditions. This species seems to be very sensitive to short emersion and removal operations which are incompatible with aquaculture processes.
Jusqu'en 1960, le pétoncle noir Chlamys varia était largement distribué sur les côtes atlantiques françaises. Actuellement, la plupart de ces gisements se sont raréfiés. Les techniques de reproduction contrôlée de mollusques étant maintenant relativement maîtrisées, des essais de réimplantation de cette espèce ont pu être tentés dans plusieurs sites ostréicoles, dont le Bassin d'Arcachon, de 1989 à 1992. Les essais de grossissement se sont soldés par un échec. Si de bonnes croissances ont été enregistrées dans le Bassin d'Arcachon au cours de ces trois années, ces performances ont été contrariées par de très fortes mortalités apparaissant peu de temps après la mise en place des élevages. Bien que l'espèce soit considérée comme relativement sensible aux facteurs du milieu, les conditions hydrobiologiques régnant sur la baie à cette période ne peuvent expliquer ces résultats. Chlamys varia semble mal supporter les diverses manipulations (emersion de courte durée, dégrappage) difficilement contournables au cours d'un cycle aquacole.

Droits : 1994 Ifremer
http://archimer.ifremer.fr/doc/1994/rapport-1567.pdf
http://archimer.ifremer.fr/doc/00000/1567/

Éditeur(s) : Cambridge Univ Press
Résumé : This paper offers a theoritical and empirical model of ecosystem-based fishery management. A multi-species and multi-fleet integrating Lotka-Volterra trophic dynamics as well as production and profit assessments is developed and applied to the coastal fishery of French Guiana. This small-scale fishery constitutes a challenging example with high fish biodiversity, several non-selective fleets and a potentially increasing local food demand due to demographic growth. The dynamic model is calibrated with 13 species and four fleets using monthly catch and effort data from 2006 to 2009. Several contrasted fishing scenarios including status quo, total closure, economic and viable strategies are then simulated. They are compared from the viewpoints of both biodiversity preservation and socioeconomic performance, assuming fixed landing prices and fixed costs. We show that fishing outputs, including food supply and fleet profitability, can be sustained on average but a loss of species cannot be avoided.
Environment And Development Economics (1355-770X) (Cambridge Univ Press), 2013-06 , Vol. 18 , P. 245-269

Droits : Cambridge University Press 2013
http://archimer.ifremer.fr/doc/00124/23483/21311.pdf
http://archimer.ifremer.fr/doc/00124/23483/21375.pdf
DOI:10.1017/S1355770X13000065
http://archimer.ifremer.fr/doc/00124/23483/

Éditeur(s) : Elsevier Science Bv
Résumé : Estuaries and coastal waters are essential nursery habitats for many marine species, and especially for flatfishes. Thus, investigating how anthropogenic disturbances affect the quality of these habitats is of major importance to understand their consequences on the population renewal of marine species. The aim of the present study was to analyse the effects of estuarine habitat degradation on the population of the common sole in the Eastern Channel, a key species in the fish community and fisheries in this area. We especially focused on the drastic drop in the surface area and on the low water quality of the Seine estuary, the main river of the Eastern Channel. A geographic Information System (GIS) was used to develop quantitative maps of sole nursery habitats in the Eastern Channel by using a habitat suitability model based on bathymetry and sediment structure. This approach indicated that juvenile densities are low in the Seine estuary with regards to other nursery sectors. Then, thanks to historical maps of the Seine estuary, habitat suitability maps were built for key dates in the modifications of this estuary since 1850. This backward predictive approach suggests that habitat loss in the Seine estuary has led to a 42% decrease of its nursery capacity. As the density of juvenile sole in the Seine estuary is low in comparison to other sectors, this represents only a 3% loss at the sole population scale, in the Eastern Channel. However, when we assumed that prior to anthropogenic disturbance the juvenile density in the Seine estuary might have been equivalent to the current density of adjacent sectors with higher quality, the loss in abundance could be nearly 23% (8-36%). Results suggest that the loss in habitat surface combined with habitat degradation has led to an important loss in the contribution of the Seine estuary nursery to the whole sole population in the Eastern Channel. (C) 2009 Elsevier BM. All rights reserved.
Journal Of Sea Research (1385-1101) (Elsevier Science Bv), 2010-07 , Vol. 64 , N. 1-2 , P. 34-44

Droits : 2009 Elsevier B.V. All rights reserved.
http://archimer.ifremer.fr/doc/00008/11921/9799.pdf
DOI:10.1016/j.seares.2009.08.003
http://archimer.ifremer.fr/doc/00008/11921/