Éditeur(s) : ISTPM
Résumé : At this moment, the quasi-totality of the catches of the 95 licensed or French trawlers fishing on the shelf of French Guyana is thrown overboard, except for shrimps. This waste, which has been going on for 20 years in French Guyana, is the consequence a very specific production system which has just been the focus of a study by some French scientists who assessed it and tried to provide some solutions. It appears that the use of these neglected resources can be made at three different levels: 1) by making the boats keep the totality of the species they already partially keep, 2) by making them keep a series of complementary species which can be sold directly as raw fish products, 3) by collecting the leftovers for the making of sub-products or flour.
Actuellement la quasi-totalité des captures à l'exclusion des crevettes, réalisées par quelques 95 chalutiers licenciés ou français travaillant sur le plateau de Guyane française est rejetée à la mer. Ce gaspillage qui dure depuis 20 ans en Guyane est dû à un système de production très particulier et vient de faire l'objet d'une étude de scientifiques français qui l'ont estimé puis ont tenté de proposer des solutions. Il apparaît que l'utilisation de ces ressources actuellement négligées peut être conçue à 3 niveaux: 1) en faisant garder par les armements la totalité des quelques espèces qu'ils conservent déjà mais très partiellement, 2) en faisant conserver une série complémentaire d'espèces directement commercialisables en tant que produits de la mer en l'état, 3) en collectant le reliquat pour transformation à terre en sous-produits et farine. Le niveau 1 peut être atteint sans modification importante du système de production, il pourrait faire l'objet d'une obligation réglementaire. Le niveau 2 remet en question la conception du travail des armements. L'occupation très importante des navires par des produits autres que la crevette ne sera acceptée que si des transformateurs à terre savent provoquer ces apports de moindre valeur mais disposant de marchés. Le niveau 3 reste une hypothèse puisqu'il implique que 30000 tonnes de produits farinables puissent être collectées, transformées et exportées hors de Guyane alors qu'aucune structure ni marché n'existe encore dans ce domaine. [OCR NON CONTRÔLE]
Science et Pêche (0036-8350) (ISTPM), 1982-05 , Vol. 324 , P. 1-9

Droits : Ifremer
http://archimer.ifremer.fr/doc/1982/publication-6699.pdf
http://archimer.ifremer.fr/doc/00000/6699/

Éditeur(s) : HAL CCSD
Résumé : The DRADEM campaign was performed from July 9th to 21th 2016 on board the Pourquoi Pas?, in the Exclusive Economic Zones of Suriname and French Guyana. This campaign belongs to a program dedicated to geological investigations of the Demerara plateau, following the GUYAPLAC (2003) and IGUANES (2013) campaigns, and before the MARGATS campaign (2016). The aims of the DRADEM campaign were to map the continental slope of the transform margin north of the Demerara plateau, and to dredge the rocks outcropping in the slope.We completed the bathymetric mapping of the continental slope, including part of the edged of the Demerara plateau. These new bathymetric data confirm the segmentation of the transform margin in three parts with very different morphologies. In addition, two circular structures were interpreted as mud volcanoes, one on the northern edge of the plateau, the other one in the distal part of the Orinoco deep sea fan.Twelve dredges were performed between 4700 and 3500 m depths. Four from these twelve did not recovered rocks. The eight others brought back variables amounts of rocks, often encrusted, but of various natures: sediments (breccia, coarse sandstones, sandstones with plants debris, sandstones with shells, clayey ooze), micro-granular rocks and metamorphic rocks (including mylonite). The nature of the rocks was determined from macroscopic observation of the rocks, which are currently altered. Of course, these determinations need to be validated and specified by onshore further studies. Anyway, most of these rocks were previously unknown in this area, and they will strongly influence our understanding of the structure and evolution of this margin. They evidence huge vertical displacements that brought back to the surface some of these rocks that formed in a deep setting.
https://hal.archives-ouvertes.fr/hal-01418244

Droits : http://creativecommons.org/licenses/by-nc/
hal-01418244
https://hal.archives-ouvertes.fr/hal-01418244
https://hal.archives-ouvertes.fr/hal-01418244/document
https://hal.archives-ouvertes.fr/hal-01418244/file/DRADEM-Campaign%20Report.pdf

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
BACKGROUND: Thrombophilias are common disorders that increase the risk of pregnancy-associated venous thromboembolism and pregnancy loss and can also increase the risk of placenta-mediated pregnancy complications (severe pre-eclampsia, small-for-gestational-age infants, and placental abruption). We postulated that antepartum dalteparin would reduce these complications in pregnant women with thrombophilia. METHODS: In this open-label randomised trial undertaken in 36 tertiary care centres in five countries, we enrolled consenting pregnant women with thrombophilia at increased risk of venous thromboembolism or with previous placenta-mediated pregnancy complications. Eligible participants were randomly allocated in a 1:1 ratio to either antepartum prophylactic dose dalteparin (5000 international units once daily up to 20 weeks' gestation, and twice daily thereafter until at least 37 weeks' gestation) or to no antepartum dalteparin (control group). Randomisation was done by a web-based randomisation system, and was stratified by country and gestational age at randomisation day with a permuted block design (block sizes 4 and 8). At randomisation, site pharmacists (or delegates) received a randomisation number and treatment allocation (by fax and/or e-mail) from the central web randomisation system and then dispensed study drug to the local coordinator. Patients and study personnel were not masked to treatment assignment, but the outcome adjudicators were masked. The primary composite outcome was independently adjudicated severe or early-onset pre-eclampsia, small-for-gestational-age infant (birthweight <10th percentile), pregnancy loss, or venous thromboembolism. We did intention-to-treat and on-treatment analyses. This trial is registered with ClinicalTrials.gov, number NCT00967382, and with Current Controlled Trials, number ISRCTN87441504. FINDINGS: Between Feb 28, 2000, and Sept 14, 2012, 292 women consented to participate and were randomly assigned to the two groups. Three women were excluded after randomisation because of ineligibility (two in the antepartum dalteparin group and one in the control group), leaving 146 women assigned to antepartum dalteparin and 143 assigned to no antepartum dalteparin. Some patients crossed over to the other group during treatment, and therefore for on-treatment and safety analysis there were 143 patients in the dalteparin group and 141 in the no dalteparin group. Dalteparin did not reduce the incidence of the primary composite outcome in both intention-to-treat analysis (dalteparin 25/146 [17.1%; 95% CI 11.4-24.2%] vs no dalteparin 27/143 [18.9%; 95% CI 12.8-26.3%]; risk difference -1.8% [95% CI -10.6% to 7.1%)) and on-treatment analysis (dalteparin 28/143 [19.6%] vs no dalteparin 24/141 [17.0%]; risk difference +2.6% [95% CI -6.4 to 11.6%]). In safety analysis, the occurrence of major bleeding did not differ between the two groups. However, minor bleeding was more common in the dalteparin group (28/143 [19.6%]) than in the no dalteparin group (13/141 [9.2%]; risk difference 10.4%, 95% CI 2.3-18.4; p=0.01). INTERPRETATION: Antepartum prophylactic dalteparin does not reduce the occurrence of venous thromboembolism, pregnancy loss, or placenta-mediated pregnancy complications in pregnant women with thrombophilia at high risk of these complications and is associated with an increased risk of minor bleeding. FUNDING: Canadian Institutes of Health Research, Heart and Stroke Foundation of Canada, and Pharmacia and UpJohn.
ISSN: 0923-7577

hal-01258557
http://hal.univ-brest.fr/hal-01258557
DOI : 10.1016/S0140-6736(14)60793-5
PUBMED : 25066248

Éditeur(s) : Actes de colloques. Ifremer Brest [ACTES COLLOQ. IFREMER.]. 1992
Résumé : The specific analysis of preys allows to determine the composition of cuttlefishes alimentary diet in natural conditions. This analysis based on exploitation of stomachal contents shows a majority of Fishes and Brachyura Crustaceans consumed. The alimentary diet with a Fish dominance in winter area (off Belle-Ille island) becomes a Crustacea dominance when adult cuttlefishes come in Morbihan Bay, in March, for reproduction. As for newly-born, they eat exclusively Crustacean Amphipoda and Macrura.
L'analyse spécifique des proies permet de déterminer la composition du régime alimentaire des seiches en milieu naturel. Cette analyse basée sur l'exploitation des contenus stomacaux montre une consommation majoritaire de Poissons et de Crustacés Brachyoures. Le régime alimentaire à dominance Poisson en zone d'hivernage (large de Belle-Ille) devient à dominance Crustacé lorsque les seiches adultes entrent dans le Golfe du Morbihan, en mars, pour s'y reproduire. Par contre, les nouveau-nés se nourrissent exclusivement de Crustacés Amphipodes et Macroures

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/1992/acte-928.pdf
http://archimer.ifremer.fr/doc/00000/928/

Résumé : The general study, scheduled from 1984 to 1986, aims at providing a judgement about the fisheries in the Celtic Sea. This area has been chosen because it is frequented by EEC vessels with, for the time being, a large majority of French vessels. Activities there are easier to monitor than anywhere else as coastal fisheries are little developed in the area. The final product will consist of a certain number of hypotheses about the planning strategies that could be implemented in the Celtic Sea. The main idea is, firstly, to conduct analytical studies, stock by stock, in order then, to synthesize them into a model integrating the interactions between fleets in relation to their target species. A bio-economical model, deriving from the latter, will enable the simulation of the consequences of the current planning procedures on the management of stocks and vessels.
L'étude générale, programmée de 1984 à 1986, vise à fournir un avis sur les pêcheries de Mer Celtique. Cette zone a été choisie car elle est fréquentée par les flottilles de la CEE avec cependant, pour le moment, une dominante française quasi exclusive. Les activités qui s'y exercent peuvent être cernées plus facilement que partout ailleurs car les pêcheries côtières sont très peu développées. Le produit final consistera dans la présentation d'un certain nombre d'hypothèses sur les stratégies d'aménagement adaptables à la Mer Celtique. La voie choisie consiste, dans un premier temps, dans des études analytiques, stock par stock, puis dans leur synthèse dans un modèle intégrant les interactions entre flottilles en relation en particulier avec la recherche des espèces-cibles. Un modèle bio-économique, dérivé du précédent, permettra de simuler les conséquences des procédures habituelles d'aménagement sur la gestion des stocks et des flottilles.

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/1985/rapport-3671.pdf
http://archimer.ifremer.fr/doc/00000/3671/

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : International audience
Ecosystems are commonly affected by natural, episodic disturbances that can abruptly and drastically alter communities. Although it has been shown that resilient ecosystems can eventually recover to pre-disturbed states, the extent to which communities in early stages of recovery could be affected by multiple anthropogenic stressors is poorly understood. Pervasive and rising anthropogenic stressors in coastal marine systems that could interactively affect the recovery of these systems following natural disturbances include high sedimentation, nutrient enrichment, and overfishing. Using a 6-month field experiment, we examined the effects of all combinations of these three stressors on key functional groups in the benthic community growing on simulated, post-disturbance reef patches within a system recovering from large-scale natural disturbances (corallivorous seastar outbreak and cyclone). Our study revealed that sedimentation, nutrient enrichment, and overfishing (simulated using exclusion cages) interactively affected coral survival and algal growth, with taxon-specific effects at multiple scales. First, our treatments affected corals and algae differently, with sedimentation being more detrimental to macroalgal growth but less detrimental to coral (Porites rus) survival in caged plots, driving significant interactions between sedimentation and caging for both taxa. We also observed distinct responses between coral species and between algal functional groups, with the most extensive responses from algal turf biomass, for which sedimentation suppressed the synergistic (positive) combined effect of nutrient enrichment and caging. Our findings suggest that different combinations of ubiquitous anthropogenic stressors, related to either sea- or land-based activities, interactively influence community recovery from disturbance and may alter species compositions in the resulting community. Our findings further suggest that anthropogenic stressors could promote further degradation of coral reefs following natural disturbances by inhibiting recovery to coral-dominated states that provide vital ecosystem services to coastal populations worldwide.
ISSN: 0722-4028

hal-01430977
https://hal-univ-perp.archives-ouvertes.fr/hal-01430977
DOI : 10.1007/s00338-016-1489-x

Éditeur(s) : HAL CCSD NRC Research Press
Résumé : Molecular, cytological, and morphological data support the existence of a hybrid population between Schoenus nigricans and Schoenus ferrugineus. This population was found in northeastern Italy, where S. nigricans is central with respect to its natural range and S. ferrugineus is marginal, being most common in the Alps and in central and northern Europe. Molecular marker data show that the putative hybrid population is genetically intermediate between nearby populations of the parent species. Cytological evidence confirmed the hybrid nature of this population, as does the almost complete sterility of plants within the population. Although no seeds were produced by the hybrid population, some possibly fertile pollen grains were produced; this suggests that the possibility of introgression between the two species through the hybrids cannot completely be excluded.
ISSN: 0831-2796

hal-01032047
https://hal.archives-ouvertes.fr/hal-01032047
DOI : 10.1139/G01-138

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
: Previously, we demonstrated that eicosapentaenoic acid enhanced ethanol-induced oxidative stress and cell death in primary rat hepatocytes via an increase in membrane fluidity and lipid raft clustering. In this context, another n-3 polyunsaturated fatty acid, docosahexaenoic acid (DHA), was tested with a special emphasis on physical and chemical alteration of lipid rafts. Pretreatment of hepatocytes with DHA reduced significantly ethanol-induced oxidative stress and cell death. DHA protection could be related to an alteration of lipid rafts. Indeed, rafts exhibited a marked increase in membrane fluidity and packing defects leading to the exclusion of a raft protein marker, flotillin. Furthermore, DHA strongly inhibited disulfide bridge formation, even in control cells, thus suggesting a disruption of protein-protein interactions inside lipid rafts. This particular spatial organization of lipid rafts due to DHA subsequently prevented the ethanol-induced lipid raft clustering. Such a prevention was then responsible for the inhibition of phospholipase C-γ translocation into rafts, and consequently of both lysosome accumulation and elevation in cellular low-molecular-weight iron content, a prooxidant factor. In total, the present study suggests that DHA supplementation could represent a new preventive approach for patients with alcoholic liver disease based upon modulation of the membrane structures.
ISSN: 0278-6915

hal-00860153
https://hal-univ-rennes1.archives-ouvertes.fr/hal-00860153
https://hal-univ-rennes1.archives-ouvertes.fr/hal-00860153/document
https://hal-univ-rennes1.archives-ouvertes.fr/hal-00860153/file/Sergent-et-al-incl-figures-accepted.pdf
DOI : 10.1016/j.fct.2013.07.061

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Cold seeps, located on sea floors and frequently fueled with methane, have been much studied for the formation of carbonate nodules, crusts or masses resulting from the activity og communities of anaerobic bacteria. In this paper, we examine the impact of cold seepage on their caging sediments, as far as their geochemical composition and microfaunal content are concerned. To this end, two fossil cold seeps of the Jurassic Beauvoisin site (Vocontian Trough, SE-France) are studied, focusing on the redox-sensitive and/or sulfide-forming trace metals. We observe that: 1) the carbonate edifices of the cold seeps are enriched in specific elements, namely, Sr, Mo As and Sb, compared to their caging marlstones, and 2) the benthic foraminifer populations were present close to the edifices. The Sr enrichment is ascribed to a contamination of the seeping fluids at the contact with underlying evaporites; the Mo-As-Sb enrichment may have several, non-exclusive, origins. We retain two scenarios; in the first one, the enrichment is due to the ascending fluids that could collect these elements when passing through thick shaly formations; in the second scenario, Mo, As and Sb were supplied to the sites of carbonate precipitation together with Fe- and Mn-oxy-hydroxides (the so-called particulate shuttle process). We favor the second scenario (possibly coupled to the first one) because the rather uncommon Mo-As-Sb association is also observed for reducing sediments deposited under the influence of Fe-Mn-shuttling.
ISSN: 0009-2541

hal-00806655
https://hal.archives-ouvertes.fr/hal-00806655
DOI : 10.1016/j.chemgeo.2012.12.012

Éditeur(s) : HAL CCSD Elsevier Masson
Résumé : International audience
Alveolar proteinosis (AP) is a rare disease characterized by alveolar accumulation of surfactant components, which impairs gas exchange. AP is classified into three groups: auto-immune AP defined by the presence of plasma autoantibodies anti-GM-CSF, the most frequent form (90 % of all AP); secondary AP, mainly occurring as a consequence of haematological diseases, or following on from toxic inhalation or infections, and genetic AP, which affects almost exclusively children. AP diagnosis is suspected where chest CT-scan demonstrates interstitial lung disease with a crazy paving aspect; and confirmed by bronchoalveolar lavage, which has a milky appearance and contains periodic acid Schiff positive proteinaceous alveolar deposits. The use of surgical lung biopsy to confirm AP is less frequent nowadays. In this context, positive antibodies against GM-CSF indicates an auto-immune etiology of the AP. Concerning management, whole lung lavage is the gold standard therapy. In refractory AP, new treatments are available such as subcutaneous or inhaled GM-CSF supplementation, or rituximab infusions. The clinical course is unpredictable. Spontaneous improvement or even cure can occur, and the 5-year actuarial survival is 95 %. The most frequent complications are infectious etiology.
La protéinose alvéolaire pulmonaire (PAP) est une maladie rare caractérisée par l’accumulation alvéolaire de composants du surfactant qui gêne les échanges gazeux. Les PAP sont séparées en trois groupes : les PAP auto-immunes caractérisées par la présence d’anticorps sériques anti-GM-CSF qui sont les plus fréquentes ; les PAP secondaires à une maladie sous-jacente, le plus souvent hématologique, mais aussi à l’inhalation de toxiques et à des infections ; enfin, les PAP d’origine génétique. Le diagnostic de PAP est évoqué sur le scanner thoracique avec une pneumopathie infiltrante diffuse ayant un aspect classique de crazy paving, puis confirmé par l’aspect laiteux du lavage bronchoalvéolaire, et la présence de matériel lipoprotéinacé PAS positif. La confirmation du diagnostic de PAP par biopsie pulmonaire chirurgicale est désormais rarement nécessaire. La positivité des anticorps sériques anti-GM-CSF signe le caractère auto-immun de la maladie. Le traitement de référence des PAP auto-immunes est le « grand lavage pulmonaire thérapeutique ». En cas de maladie réfractaire, d’autres traitements sont disponibles, tels que le GM-CSF en injection sous-cutanée ou en aérosol et le rituximab. L’évolution de la maladie est imprévisible. Une évolution spontanément favorable ou même une guérison spontanée peuvent survenir et la survie actuarielle à 5 ans est de 95 %. Les principales complications sont infectieuses.
ISSN: 0761-8425

hal-01085907
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01085907
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01085907/document
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01085907/file/Prot%C3%A9inose%20alv%C3%A9olaire%20pulmonaire_accepted.pdf
DOI : 10.1016/j.rmr.2014.08.009

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
CK chondrites are highly oxidized meteorites containing abundant magnetite and trace amounts of Fe,Ni metal. Although the group is predominately composed of equilibrated meteorites (types 4-6), in recent years a significant number of new samples have been classified as being either CK3 or CK3-anomalous. These unequilibrated CKs often display a close affinity with members of the CV oxidized subgroup. CKs and CVs (oxidized subgroup) may therefore form a continuum and by implication could be derived from a single common parent body. To investigate the relationship between these two groups a detailed study of the oxygen isotope composition, opaque mineralogy and major and trace element geochemistry of a suite of CV and CK chondrites has been undertaken. The results of oxygen isotope analysis confirm the close affinity between CV and CK chondrites, while excluding the possibility of a linkage between the CO and CK groups. Magnetites in both CV and CK chondrites show significant compositional similarities, but high Ti contents are a diagnostic feature of the latter group. The results of major and trace element analysis demonstrate that both CV and CK chondrites show overlapping variation. Supporting evidence for a single common source for both groups comes from their similar cosmic-ray exposure age distributions. Recent reflectance spectral analysis is consistent with both the CVs and CKs being derived from Eos family asteroids, which are believed to have formed by the catastrophic disruption of a single large asteroid. Thus, a range of evidence appears to be consistent with CV and CK chondrites representing samples from a single thermally stratified parent body. In view of the close similarity between CV and CK chondrites some modification of the present classification scheme may be warranted, possibly involving integration of the two groups. One means of achieving this would be to reassigned CK chondrites to a subgroup of the oxidized CVs. It is recognized that a full evaluation of this proposal may require further study of the still poorly understood CK3 chondrites.
ISSN: 0016-7037

hal-00474633
https://hal.archives-ouvertes.fr/hal-00474633
DOI : 10.1016/j.gca.2009.11.029

Résumé : Vous trouverez dans ce document les 24 poissons les plus courants de Guyane (sur un nombre d'espèces approchant les 200) avec leurs principales caractéristiques, leurs noms scientifiques, français, anglais et espagnol et leurs photographies. Ils sont classés, de l'acoupa au vivaneau ti yeux, par ordre alphabétique. Si vous ne trouvez pas de chiffres sur la production de telle ou telle espèce, c'est parce qu'ils n'existent pas, mais aussi et surtout parce qu'ils ne signifieraient rien, les ressources étant abondantes et les productions pouvant se faire quasiment à la demande. Pour conclure, il convient d'ajouter que la Guyane se situerait au niveau du 5ème port national en valeur débarquée (entre le 4ème et le 6ème selon les années, que sa position géographique, sa zone économique exclusive de 130.000 km2 et ses eaux riches en sels minéraux et en planctons la dotent de ressources de pëche inépuisables.

Droits : 1992 Ifremer, CCI Guyane
http://archimer.ifremer.fr/doc/00136/24741/22804.pdf
http://archimer.ifremer.fr/doc/00136/24741/

Éditeur(s) : Springer
Résumé : Two recurring syndromes threaten the viability of the shrimp industry in New Caledonia, which represents the second largest export business. The "Syndrome 93" is a cold season disease due to Vibrio penaeicida affecting all shrimp farms, while the "Summer Syndrome" is a geographically restricted vibriosis caused by a virulent lineage of Vibrio nigripulchritudo. Microbiological procedures for diagnosis of these diseases are time-consuming and do not have the ability to discriminate the range of virulence potentials of V. nigripulchritudo. In this study, we developed a multiplex PCR method to simultaneously detect these two bacterial species and allow for pathotype discrimination. The detection limits of this assay, that includes an internal amplification control to eliminate any false-negative results, were determined at 10 pg purified DNA and 200 cfu/ml. After confirming the effectiveness of our method using experimentally infected animals, its accuracy was compared to standard biochemical methods during a field survey using 94 samples collected over 3 years from shrimp farms encountering mortality events. The multiplex PCR showed very high specificity for the detection of V. penaeicida and V. nigripulchritudo (inclusivity and exclusivity 100%) and allowed us to detect the spreading of highly pathogenic isolates of V. nigripulchritudo to a farm adjoining the "Summer Syndrome area." This assay represents a simple, rapid, and cost-effective diagnostic tool for implementing timely risk management decisions but also understanding the seasonal and geographical distribution of these pathogens.
Microbial Ecology (0095-3628) (Springer), 2012-01 , Vol. 63 , N. 1 , P. 127-138

Droits : Springer Science+Business Media, LLC 2011
http://archimer.ifremer.fr/doc/00063/17398/15169.pdf
DOI:10.1007/s00248-011-9951-3
http://archimer.ifremer.fr/doc/00063/17398/

Éditeur(s) : Nature Publishing Group
Résumé : Vibrio nigripulchritudo is an emerging pathogen of farmed shrimp in New Caledonia and other regions in the Indo-Pacific. The molecular determinants of V. nigripulchritudo pathogenicity are unknown; however, molecular epidemiological studies have suggested that pathogenicity is linked to particular lineages. Here, we performed high-throughput sequencing-based comparative genome analysis of 16 V. nigripulchritudo strains to explore the genomic diversity and evolutionary history of pathogen-containing lineages and to identify pathogen-specific genetic elements. Our phylogenetic analysis revealed three pathogen-containing V. nigripulchritudo clades, including two clades previously identified from New Caledonia and one novel clade comprising putatively pathogenic isolates from septicemic shrimp in Madagascar. The similar genetic distance between the three clades indicates that they have diverged from an ancestral population roughly at the same time and recombination analysis indicates that these genomes have, in the past, shared a common gene pool and exchanged genes. As each contemporary lineage is comprised of nearly identical strains, comparative genomics allowed differentiation of genetic elements specific to shrimp pathogenesis of varying severity. Notably, only a large plasmid present in all highly pathogenic (HP) strains encodes a toxin. Although less/non-pathogenic strains contain related plasmids, these are differentiated by a putative toxin locus. Expression of this gene by a non-pathogenic V. nigripulchritudo strain resulted in production of toxic culture supernatant, normally an exclusive feature of HP strains. Thus, this protein, here termed 'nigritoxin', is implicated to an extent that remains to be precisely determined in the toxicity of V. nigripulchritudo.
Isme Journal (1751-7362) (Nature Publishing Group), 2013-10 , Vol. 7 , N. 10 , P. 1985-1996

Droits : 2013 International Society for Microbial Ecology All rights reserved 1751-7362/13
http://archimer.ifremer.fr/doc/00160/27117/28369.pdf
DOI:10.1038/ismej.2013.90
http://archimer.ifremer.fr/doc/00160/27117/

Éditeur(s) : Soc Geol France
Résumé : The Lesser Antilles subduction zone has produced no recent strong thrust earthquakes, making it difficult to quantify the seismic hazard from such events. The Lesser Antilles arc has a low subduction rate and an accretionary wedge that is very wide at its southern end. To investigate the effect of the wedge on seismogenesis, numerical models of forearc thermal structure were constructed along six transects perpendicular to the arc in order to determine the thermally predicted width of the seismogenic zone. The geometry of each section is constrained by published seismic profiles and crustal models derived from gravity and seismic data and by earthquake hypocenters at depth. A major constraint on the deep part of the model is that mantle temperature beneath the volcanic arc should achieve a temperature of 1,100 degrees C to generate partial melts. Predicted surface heat flow is compared to the available heat flow observations. Thermal modeling results indicate a systematic southward increase in the width of the seismogenic zone, more than doubling in width from north to south and corresponding to a dramatic southward increase in forearc width (distance from the arc to the deformation front of the accretionary wedge). The minimum width of the seismogenic zone (distance between the intersections of the subduction interface with the 150 degrees C and 350 degrees C isotherms) increases from about 80 km, north of 16 degrees N, to 230 km, at 13 degrees N. The maximum width (between the 100 degrees C and 450 degrees C isotherms) ranges from about 150 km in the north to up to 320 km in the south. This large variation in the width of the seismogenic zone is a consequence of the increasing width of the accretionary wedge to the south, caused by the increased thickness of sediment on the subducting plate. There is good agreement between the thermally predicted seismogenic limits and the sparse distribution of recorded thrust earthquakes, which are observed only in the northern portion of the arc. Possible scenarios for mega-thrust earthquakes are discussed. Depending on the segment length (along-strike) of the rupture plane, the occurrence of an event of magnitude 8-9 cannot be excluded.
L’absence de grands séismes récents à mécanismes chevauchants dans la zone de subduction des Petites Antilles rend difficile l’évaluation de l’aléa sismique lié à de tels événements. L’arc des Petites Antilles est caractérisé par une faible vitesse de subduction et par la présence d’un prisme d’accrétion très développé à son extrémité méridionale. Afin d’évaluer les effets de la largeur de ce prisme sur la genèse des séismes, nous avons étudié six sections perpendiculaires à l’arc, du nord au sud de celui-ci, pour déterminer la largeur de la zone sismogène prédite par les modèles thermiques appliqués à chacune de ces coupes. La géométrie de ces dernières est contrainte par les profils sismiques publiés, par les modèles de structure crustale déduits des données gravitaires et sismiques, et enfin par la distribution des hypocentres des séismes. Un contrôle important permettant de tester la validité des modèles thermiques en profondeur est qu’une température minimale de 1 100oC, compatible avec la fusion partielle du manteau hydraté, doit être atteinte sous l’arc volcanique actif. Par ailleurs, le flux thermique en surface prédit par ces modèles doit être compatible avec les mesures de flux de chaleur. Les modèles thermiques retenus d’après ces critères montrent une augmentation du simple au double vers le sud de la largeur de la zone sismogène, qui correspond à un élargissement considérable de la taille du domaine avant-arc. En effet, la largeur minimale de la zone sismogène (définie comme la distance entre les intersections de l’interface des plaques avec les isothermes 150o et 350oC) augmente d’environ 80 km au nord de 16oN jusqu’à 230 km à 13oN. La largeur maximale de cette zone (définie par les intersections de l’interface avec les isothermes 100o et 450oC) augmente, quant à elle, d’environ 150 km au nord jusqu’à 320 km au sud de l’arc. Cette variation considérable est la conséquence de l’augmentation de la largeur du prisme d’accrétion, elle-même causée par l’accumulation croissante des sédiments déposés sur la plaque plongeante. Les largeurs de la zone sismogène prédites à l’aide des modèles thermiques sont en bon accord avec les rares données disponibles sur les séismes à mécanismes chevauchants dans la partie nord de l’arc. Les scénarios possibles relatifs à des méga-séismes de ce type n’excluent pas de futurs événements atteignant des magnitudes de 8 à 9.
Bulletin De La Societe Geologique De France (0037-9409) (Soc Geol France), 2013 , Vol. 184 , N. 1-2 , P. 47-59

Droits : 2013 Societe Geologique de France
http://archimer.ifremer.fr/doc/00140/25140/29432.pdf
DOI:10.2113/gssgfbull.184.1-2.47
http://archimer.ifremer.fr/doc/00140/25140/

Éditeur(s) : HAL CCSD
Résumé : International audience
Estrogens affect brain development of vertebrates, not only by impacting activity and morphology of existing circuits, but also by modulating embryonic and adult neurogenesis. The issue is complex as estrogens can not only originate from peripheral tissues, but also be locally produced within the brain itself due to local aromatization of androgens. In this respect, teleost fishes are quite unique because aromatase is expressed exclusively in radial glial cells, which represent pluripotent cells in the brain of all vertebrates. Expression of aromatase in the brain of fish is also strongly stimulated by estrogens and some androgens. This creates a very intriguing positive auto-regulatory loop leading to dramatic aromatase expression in sexually mature fish with elevated levels of circulating steroids. Looking at the effects of estrogens or anti-estrogens in the brain of adult zebrafish showed that estrogens inhibit rather than stimulate cell proliferation and newborn cell migration. The functional meaning of these observations is still unclear, but these data suggest that the brain of fish is experiencing constant remodeling under the influence of circulating steroids and brain-derived neurosteroids, possibly permitting a diversification of sexual strategies, notably hermaphroditism. Recent data in frogs indicate that aromatase expression is limited to neurons and do not concern radial glial cells. Thus, until now, there is no other example of vertebrates in which radial progenitors express aromatase. This raises the question of when and why these new features were gained and what are their adaptive benefits. This article is part of a Special Issue entitled: Nuclear receptors in animal development.
Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms

Droits : info:eu-repo/semantics/OpenAccess
hal-01102449
https://hal.archives-ouvertes.fr/hal-01102449
https://hal.archives-ouvertes.fr/hal-01102449/document
https://hal.archives-ouvertes.fr/hal-01102449/file/Coumailleau%20et%20al%20final%20manuscript.pdf
DOI : 10.1016/j.bbagrm.2014.07.002

Éditeur(s) : ISTPM
Résumé : The Thalassa, a ship of the Institute of Fishing, carried out two trawling campaigns off the coasts of Rio de Oro, Mauritania and Senegal. The first one took place in November and December 1962; it extended from Cape Juby to Tamxat (17°20'N). The second, directed more towards the south, reached the Fosse de Cayar Submarine Canyon, near Cape Verde; it occurred in March and April 1968. These operations represent in total 100 trawl passes between latitudes 15° and 28°N and depths of 10 to 800 metres. These two campaigns' overall data are introduced incidentally. The data recorded here are exclusively about the twenty species of sparidae harvested. They concern the geographic and bathymetric distribution, frequency and numbers, size and sex. There emerge certain comments on the animal life, biology and fishing. In some cases, it seemed worthwhile to emphasise the morphological differences that make it possible to distinguish among them species at times very closely related.
La « Thalassa », navire de l'Institut des Pêches, a effectué deux campagnes de chalutage au large des côtes du Rio de Oro, de la Mauritanie et du Sénégal. La première a eu lieu en novembre et décembre 1962; elle s'est étendue du cap Juby à Tamxat (17°20'N). La seconde, plus orientée vers le sud, a atteint la fosse de Cayar, à proximité du cap Vert; elle s'est déroulée en mars et avril 1968. Ces opérations représentent au total cent traicts de chalut qui se répartissent entre les latitudes 15° et 28°N et les profondeurs de 10 à 800 m. Les données d'ensemble de ces deux campagnes sont présentées par ailleurs. Celles consignées ici concernent exclusivement les vingt espèces de sparidés récoltées. Elles ont trait à la répartition géographique et bathymétrique, la fréquence et l'abondance, la taille et le sexe. Il s'en dégage certaines remarques sur la faunistique, la biologie et la pêche. Dans certains cas il a paru intéressant de souligner les différences morphologiques qui permettent de distinguer, entre elles, des espèces parfois très voisines.(OCR non controlé)
Revue des Travaux de l'Institut des Pêches Maritimes (0035-2276) (ISTPM), 1969-03 , Vol. 33 , N. 1 , P. 97-116

Droits : Ifremer
http://archimer.ifremer.fr/doc/1969/publication-3156.pdf
http://archimer.ifremer.fr/doc/00000/3156/

Éditeur(s) : HAL CCSD Oxford University Press (OUP): Policy B1 - Oxford Open Option B Oxford University Press (OUP)
Résumé : International audience
BACKGROUNDA very large proportion of the literature on the endocrine disruptors categorized as anti-androgens deals with phthalates, which are produced in large amounts for use as plastic emollients and additives. In this review, we bring together and analyse work on the effects of phthalates in animals and humans at different stages of their development to assess whether or not their possible anti-androgenic properties represent a significant threat to human health.METHODSThe database PubMed was systematically searched for all English language articles until July 2013 in each subject area discussed.RESULTSWe provide an up-to-date exhaustive, comparative and critical assessment of both in vivo and in vitro studies undertaken to explore the effects of phthalates on the human testis from fetal life to adulthood. These results are compared and discussed in the light of the key data reported in the literature for mice and rats.CONCLUSIONSThe current literature highlights the fact that (i) there is a huge difference between the number of studies performed in animals and in humans, with many fewer for humans; (ii) there are differences in the way rats, mice, primates and humans respond to phthalates, for reasons that need to be further explored; (iii) more work is required to clarify the contradictions, in the few existing human epidemiological studies at all stages of development, which may be partly explained by varying methods of exposure assessment; (iv) in accordance with recent findings in rodents, it cannot be excluded that transgenerational effects of phthalates and/or epigenetic changes exist in humans; (v) a number of methodological limitations need to be solved for the in vitro and xenografting models using human fetal testis to fulfil their 'missing link' role between epidemiological studies in humans and rodent models; and (vi) epidemiological and in vitro studies generally converge sufficiently to conclude that phthalate anti-androgenicity is plausible in adult men.
ISSN: 1355-4786

inserm-00869540
http://www.hal.inserm.fr/inserm-00869540
DOI : 10.1093/humupd/dmt050
PUBMED : 24077978

Éditeur(s) : HAL CCSD E Schweizerbart Science Publishers
Résumé : The occurrence and preservation of aragonite in eclogite-facies rocks of north-eastern Corsica is linked to an uncommon microtexture. Aragonite exclusively occurs as oriented fibres in garnet crystals of a graphitic, more or less siliceous marble that immediately overlies a serpentinite body of the meta-ophiolitic unit. The arrangement of the fibres is grossly radial, but more clearly sectoral in subhedral garnet, the fibres growing perpendicular to the garnet/matrix interface. Raman mapping reveals that the carbonate is calcite in the matrix and in poikiloblastic garnet cores, and that the fibres in the garnet mantle are aragonite alone in the case of a carbonate matrix, and both aragonite and quartz (in distinct fibres) in a quartz–carbonate matrix. These features are interpreted as prograde intergrowths, the result of garnet nucleation and growth in a calcite and then aragonite matrix (±quartz). Upon further heating and/or decompression, the aragonite matrix transformed back to calcite while the carbonates included in garnet retained their original structure, in spite of the relatively high temperature attained (ca. 500 °C). These aragonite relics are one more example of the preservation of a high-pressure polymorph through mechanical shielding of inclusions in a rigid host. The aragonite–garnet intergrowths are similar to quartz–garnet intergrowths described in amphibolite-facies graphitic schists. They are evidence that oriented inclusions in garnet are not necessarily precipitates (‘exsolutions'). Unlike precipitates, their orientation is controlled more by the shape of the garnet growth front than by symmetry constraints.
ISSN: 0935-1221

hal-00411136
https://hal.archives-ouvertes.fr/hal-00411136
DOI : 10.1127/0935-1221/2008/0020-1892

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
We have measured simultaneously the methane (CH4) and carbon dioxide (CO2) surface concentrations and water–air fluxes by floating chambers (FC) in the Petit-Saut Reservoir (French Guiana) and its tidal river (Sinnamary River) downstream of the dam, during the two field experiments in wet (May 2003) and dry season (December 2003). The eddy covariance (EC) technique was also used for CO2 fluxes on the lake. The comparison of fluxes obtained by FC and EC showed little discrepancies mainly due to differences in measurements durations which resulted in different average wind speeds. When comparing the gas transfer velocity (k600) for a given wind speed, both methods gave similar results. On the lake and excluding rainy events, we obtained an exponential relationship between k600 and U10, with a significant intercept at 1.7 cm h− 1, probably due to thermal effects. Gas transfer velocity was also positively related to rainfall rates reaching 26.5 cm h−1 for a rainfall rate of 36 mm h− 1. During a 24-h experiment in dry season, rainfall accounted for as much as 25% of the k600. In the river downstream of the dam, k600 values were 3 to 4 times higher than on the lake, and followed a linear relationship with U10.
ISSN: 0924-7963

hal-00519502
https://hal.archives-ouvertes.fr/hal-00519502
DOI : 10.1016/j.jmarsys.2006.03.019