Éditeur(s) : HAL CCSD
Résumé : il s'agit d'un type de produit dont les métadonnées ne correspondent pas aux métadonnées attendues dans les autres types de produit : ACTIVITY_REPORT
Understanding genomic evolution in wild populations is of particular importance because evolution is a central process in our understanding of populations’ history and their future response to global changes. In addition to fundamental knowledge, the study of populations’ evolution has wide applications such as conservation/restoration genetics or epidemiology. Indeed, genetic diversity is the ‘fuel’ for populations’ evolution and adaptation to new conditions, and estimating the extent and the geographic structure of genetic diversity, as well as identifying the evolutionary forces behind (demography, gene flow, and adaptation) are thus major challenges in the current context of global changes. [br/]A particular attention is currently devoted to the process of genetic divergence in wild populations, with emphases on gene flow, local adaptation, and their interactions. Indeed, adaptation in wild populations is supported in many species by many kinds of experiments based on both quantitative phenotypic traits and molecular data. However, the processes governing populations’ evolution are poorly understood in the tropical rainforest of Amazonia, and the relative influence of neutral and adaptive processes are continuously discussed. [br/]I am a young scientist interested in the process of genomic divergence in wild (tree) populations. I aimed at understanding how evolution structures the genetic diversity and governs molecular divergence in wild populations, with particular emphases on gene flow and local adaptation. During five years as a young scientist, I worked on answering the following questions, focusing on two tree species occupying vulnerable areas: mainly [i]Eperua falcata[/i] in Amazonia and, to a lesser extent, [i]Abies alba[/i] in the Mediterranean area.[br/][u]Scientific questions:[/u][br/]- Which evolutionary drivers are responsible of the structure of genetic diversity in wild populations occupying wide areas? This question was addressed at different geographical scales: from large (regional) to very local (microgeographic) scales. [br/]- What is the relative influence of neutral (gene flow, inbreeding) and adaptive drivers in the process of genetic divergence?[br/]- Is microgeographic adaptation possible in spite of extensive gene flow between populations occupying the extreme boundaries of an ecological gradient? [br/]- What is the extent of natural selection in the (whole) genome of wild populations? [br/][br/]My research work is at the interface between three promising disciplines: Evolutionary genomics (i.e. the study of populations evolution and the evolutionary drivers behind), Bioinformatics (i.e. the treatment of next-generation data), and Bayesian modelling (i.e. the empirical calibration of complex mechanistic model). I intend to take advantage of the recent advances in sequencing and informatic technologies to bring up to date the field of ecological genetics and evolutionary biology, by developing modern research strategies to study the process of genomic divergence in wild populations.
https://hal.archives-ouvertes.fr/hal-01204218

hal-01204218
https://hal.archives-ouvertes.fr/hal-01204218
PRODINRA : 286326

Éditeur(s) : HAL CCSD
Résumé : Taiwan is a young mountain belt, known as one of the most active area in the world. Since the beginning of the 20th century more than twenty _ Mw 7 earthquakes have struck the island. However, the occurrence of larger events (_Mw 8) is still a matter of debate. In this framework it is of key importance to obtain longer record in order to evaluate the occurrence of large past earthquakes. The sub-aqueous paleoseismology, based on the record of the sedimentary gravity deposits, appears as a serious alternative to approach this thematic and is a rapidly advancing field that has the potential to illuminate the long-term history of seismicity.The first part of this work was to investigate the present sedimentary systems off east Taiwan, essential to understand the morphosedimentary features, sedimentary facies and processes governing the evolution of the submarine slope, and the controlling factors of the recent sedimentation. Our results showed that the offshore slope east Taiwan is affected by a variety of sedimentary systems and processes, and that turbidity currents appear as the main erosional processes covering nearly 60% of the sedimentary record. Turbidity currents are generated by distinct controlling factors such as tectonic and climatic activity that enabled us to define twoend-members relative to turbidity currents initiation: Turbidity currents preconditioned by tectonic activity and triggered by earthquakes shaking and likely deposited into intra-slope basin and turbidity currents driven by climatic activity such as extreme floods or typhoons, generated in basin directly connected with onland rivers.The second part consisted to apply a paleoseismic approach, based on turbidites record, at two time-scales. First, we tested and validated the method by correlating turbidites deposits with instrumental earthquakes. Then, once calibrated we extended the time-series back in time. We dated the three most recent turbidites layers circa 2001 ± 3 AD, 1950 ± 5 AD and 1928 ± 10 AD. Using empirical relationship that link peakground acceleration, distance and magnitude to calibrate the seismic sources, we correlate these three turbidites with instrumental earthquakes: the Chengkong Earthquake 12/10/2003 (Mw 6.8), the 11/24/1951 Taitung Earthquake (Mw 7.1) and the 9/4/1935 Lutao Earthquake (Mw 7.0) respectively. Applying criteria to discriminating the different triggering mechanisms for turbidity current generation, we propose that earthquakes are the main triggering mechanisms. Dating and age modeling provided a part of the chronology of extreme events since the last 3000 years and allowed us to estimate return time for earthquakes Mw _ 6.8.This work represents a good starting-point for future investigations in order to better assess Holocene time series of extreme events.
La chaine de Taïwan représente l’une des zones les plus actives au monde. Depuis le début du XXe siècle, plus d’une vingtaine de séismes _Mw 7 ont affecté l’île. Cependant la probabilité d’occurrence de séismes plus importants (_Mw 8) est toujours matière à débat. Dans un tel contexte, il apparait donc important d’obtenir des enregistrements plus anciens pour évaluer l’occurrence de tels évènements. La paléosismologie marine, basée sur l’enregistrement des dépôts issus de la sédimentation gravitaire, apparait comme une alternative sérieuse afin d’illuminer l’histoire de la sismicité sur des périodes anciennes. Ce travail de thèse apporte de nouvelles contraintes sur l’histoire sismique au large, à l’est de Taïwan, au cours des derniers 3000 ans.La première partie de ce travail consiste à caractériser les systèmes sédimentaires récents. Cette étape fut essentielle pour la compréhension des processus, faciès sédimentaires et les facteurs de contrôle de la sédimentation qui régissent l’évolution de la pente sous-marine. Ces résultats ont montré que l’Est de Taïwan est caractérisé par une grande variabilité de processus et que les courants de turbidité dominent l’enregistrement sédimentaire.Les courants de turbidité sont générés par deux facteurs distincts : l’activité tectonique/sismique et l’activité climatique. La deuxième partie de ce travail est consacrée à l’approche paléosismique en utilisant les dépôts de turbidités comme marqueurs des paléoséismes. Pour ce faire, nous avons dans un premier temps testé et validé l’approche à l’échelle du siècle dernier. Ensuite une fois calibré, nous avons pu étendre les séries temporelles à l’échelle de l’Holocène. Nous avons daté les trois plus récents évènements turbiditiques autour de 2001 ± 3 AD, 1950 ± 5 AD et 1928 ± 10 AD. En utilisant des relations empiriques intégrant magnitude, distance et valeur du "peak ground acceleration", nous avons pu calibrer la source sismique et ainsi corréler ces trois turbidites à trois séismes instrumentaux : le séisme de Chengkong (12/10/2003) (Mw 6.8), le séisme de Taitung (11/24/1951) (Mw 7.1) et le séisme de Lutao (9/4/1935) (Mw 7.0). Au-delà du siècle dernier, les datations et modèles d’âges nous permettent d’établir une partie de la chronologie des évènements extrêmes sur une période de 3000 ans et d’estimer un temps de retour pour des évènements de l’ordre _Mw 7. Les résultats ont toutefois montré que ces temps de retour sont nettement supérieurs à ceux connus sur le siècle dernier, ce qui suggère que tous les séismes ne sont pas enregistrés par les dépôts sédimentaires marins. Ce travail de thèse a donc permis de montrer que les dépôts issus de la sédimentation évènementielle peuvent être considérés comme marqueurs de la sismicité et que cette approche peut constituer un outil complémentaire pour les études portant sur le risque sismique.
https://tel.archives-ouvertes.fr/tel-01661529

NNT : 2014MON20133
tel-01661529
https://tel.archives-ouvertes.fr/tel-01661529
https://tel.archives-ouvertes.fr/tel-01661529/document
https://tel.archives-ouvertes.fr/tel-01661529/file/55796_LEHU_2014_archivage_cor.pdf

Éditeur(s) : Taylor & Francis Ltd
Résumé : A new method is developed to estimate daily turbulent airsea fluxes over the global ocean on a 0.25 degrees grid. The required surface wind speed (w(10)) and specific air humidity (q(10)) at 10m height are both estimated from remotely sensed measurements. w(10) is obtained from the SeaWinds scatterometer on board the QuikSCAT satellite. A new empirical model relating brightness temperatures (T-b) from the Special Sensor Microwave Imager (SSM/I) and q(10) is developed. It is an extension of the author's previous q(10) model. In addition to T-b, the empirical model includes sea surface temperature (SST) and airsea temperature difference data. The calibration of the new empirical q(10) model utilizes q(10) from the latest version of the National Oceanography Centre airsea interaction gridded data set (NOCS2.0). Compared with mooring data, the new satellite q(10) exhibits better statistical results than previous estimates. For instance, the bias, the root mean square (RMS), and the correlation coefficient values estimated from comparisons between satellite and moorings in the northeast Atlantic and the Mediterranean Sea are 0.04gkg(1), 0.87gkg(1), and 0.95, respectively. The new satellite q(10) is used in combination with the newly reprocessed QuikSCAT V3, the latest version of SST analyses provided by the National Climatic Data Center (NCDC), and 10m air temperature estimated from the European Centre for Medium-Range Weather Forecasts (ECMWF) reanalyses (ERA-Interim), to determine three daily gridded turbulent quantities at 0.25 degrees spatial resolution: surface wind stress, latent heat flux (LHF), and sensible heat flux (SHF). Validation of the resulting fields is performed through a comprehensive comparison with daily, in situ values of LHF and SHF from buoys. In the northeast Atlantic basin, the satellite-derived daily LHF has bias, RMS, and correlation of 5Wm(2), 27Wm(2), and 0.89, respectively. For SHF, the statistical parameters are 2Wm(2), 10Wm(2), and 0.94, respectively. At global scale, the new satellite LHF and SHF are compared to NOCS2.0 daily estimates. Both daily fluxes exhibit similar spatial and seasonal variability. The main departures are found at latitudes south of 40 degrees S, where satellite latent and sensible heat fluxes are generally larger.
International Journal Of Remote Sensing (0143-1161) (Taylor & Francis Ltd), 2013-07 , Vol. 34 , N. 14 , P. 5243-5261

Droits : 2013 Taylor & Francis
http://archimer.ifremer.fr/doc/00137/24825/23575.pdf
DOI:10.1080/01431161.2013.787502
http://archimer.ifremer.fr/doc/00137/24825/

Éditeur(s) : Pergamon-elsevier Science Ltd
Résumé : The south-west lagoon of New Caledonia is a wide semi-open coral reef lagoon bounded by an intertidal barrier reef and bisected by numerous deep inlets. This paper synthesizes findings from the 2000-2008 French National Program EC2CO-PNEC relative to the circulation and the transport of suspended particles in this lagoon. Numerical model development (hydrodynamic, fine suspended sediment transport, wind-wave, small-scale atmospheric circulation) allowed the determination of circulation patterns in the lagoon and the charting of residence time, the later of which has been recently used in a series of ecological studies. Topical studies based on field measurements permitted the parameterisation of wave set-up induced by the swell breaking on the reef barrier and the validation of a wind-wave model in a fetch-limited environment. The analysis of spatial and temporal variability of suspended matter concentration over short and long time-scales, the measurement of grain size distribution and the density of suspended matter (1.27 kg 1(-1)), and the estimation of erodibility of heterogeneous (sand/mud, terrigenous/biogenic) soft bottoms was also conducted. Aggregates were shown to be more abundant near or around reefs and a possible biological influence on this aggregation is discussed. Optical measurements enabled the quantification of suspended matter either in situ (monochromatic measurements) or remotely (surface spectral measurements and satellite observations) and provided indirect calibration and validation of a suspended sediment transport model. The processes that warrant further investigation in order to improve our knowledge of circulation and suspended sediment transport in the New Caledonia lagoon as well as in other coral reef areas are discussed, as are the relevance and reliability of the numerical models for this endeavour.
Marine Pollution Bulletin (0025-326X) (Pergamon-elsevier Science Ltd), 2010 , Vol. 61 , N. 7-12 , P. 269-296

Droits : 2010 Elsevier Ltd All rights reserved.
http://archimer.ifremer.fr/doc/00014/12526/9401.pdf
DOI:10.1016/j.marpolbul.2010.06.023
http://archimer.ifremer.fr/doc/00014/12526/

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Plio-Pleistocene diatomitic sequences in the Shamb paleo-lake (South Armenia, Lesser Caucasus) offer a rare opportunity to give new insights on the paleo-climate of Western Asia. We present an integrated palynological, 40Ar/39Ar geochronologic and magnetostratigraphic study for the most complete section in the sedimentary deposits of the Shamb paleo-lake. 40Ar/39Ar dating of two volcaniclastic layers provided ages of 1.24 ± 0.03 and 1.16 ± 0.02 Ma (2. Magnetostratigraphic data show that the entire Shamb section is of reversed polarity which, combined with 40Ar/39Ar dating, suggests that the entire section correlates with part of the Matuyama period (1.785-1.070 Ma). Pollen assemblages and macroremains diversity clearly show an alternation of glacial and interglacial phases. Age calibrations and accumulation rate extrapolation allow a direct correlation of climate changes with the global isotopic curve, and show that the Shamb section probably ranges from approximately 1.300 to 1.080 Ma (marine isotopic stages 40 to 31). The vegetation of the Lesser Caucasus developed in a mosaic pattern in a Pleistocene continental, mostly arid climate, comparable to the present-day climate. The observed vegetation changes record a dominant climate response to the obliquity orbital parameter, but the influence of precession could not be established from the Shamb data. Pollen and macroflora both indicate that glacial periods were cold and dry and that interglacials were warm with local humidity. The early Pleistocene climatic model for Western Asia is thus similar to the climatic model for the Mediterranean area.
ISSN: 0012-821X

hal-00470353
https://hal.archives-ouvertes.fr/hal-00470353
DOI : 10.1016/j.epsl.2010.01.007

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
The kinetics of hydrogenation of dry iron-bearing olivine single crystals was determined by performing hydration experiments under hydrothermal conditions at high pressure. The experiments were performed in a multi-anvil press at 3 GPa, for a temperature range between 900 and 1200 °C and for various durations. The oxygen fugacity was buffered along Ni-NiO joint. Polarized Fourier transform infrared spectroscopy and recent empirical calibration were used to quantify the hydroxyl distributions in the samples along crystallographic axes after the experiments. The chemical diffusion coefficients are similar (barely slower) than in olivine hydrated at lower pressure (0.2 and 0.3 GPa) for the same diffusion mechanism. Under the given experimental conditions, the anisotropy of diffusion is the same as for proton-vacancy mechanism, with diffusion along the [0 0 1] axis faster than along the [1 0 0]. However, the anisotropy at 3 GPa is weaker compared to measurements at lower pressures and the analysis of concentration profiles using 3D models shows that an isotropic solution could also be relevant. Fits of the diffusion data to an Arrhenius law yield activation energies for the slightly faster [0 0 1] axis of the crystallographic axes around 198 ± 5 kJ mol−1, a value only slightly lower than the results from previous experimental studies for natural iron-bearing olivine hydrogenated at lower confining pressure. At 3 GPa, hydrogenation can be well approximated by a single mechanism controlled by coupled diffusion of protons and octahedral vacancies (di- and tri-valent ions). The diffusion rates are fast enough to alter hydrogen concentration within olivine in xenoliths ascending from the mantle or experiencing hydrogen-rich metasomatism events, but too slow to permit complete homogenization of hydrogen in olivine-rich rocks at kilometer scale in less than one My.
ISSN: 0031-9201

hal-01412663
https://hal.archives-ouvertes.fr/hal-01412663
DOI : 10.1016/j.pepi.2016.08.005

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
After Jurassic rifting, numerous carbonate platforms (i.e., the Orizaba, Cordoba and Golden Lane-Tuxpan platforms) developed during the Lower and Middle Cretaceous episode of thermal subsidence along the western passive margin of the Gulf of Mexico, with intervening basinal domains (i.e., the Tampico-Misantla, Zongolica, Veracruz and Deep Gulf of Mexico - DGM - basins).;During the Late Cretaceous-Paleocene, the east-verging Sierra Madre Oriental thrust belt developed, resulting in tectonic uplift and unroofing of the allochthonous units (i.e. tectonic units made up of former Orizaba and Cordoba platforms and Zongolica Basin series). This new topography provided also an important source of clastics to feed the adjacent foredeep, where coeval tectonic loading accounted for the bending of the foreland lithosphere. However, shallow water facies or even emersion persisted until the Eocene in the forebulge area (at the present location of the Golden Lane), preventing locally the clastics to reach the DGM. This topographic barrier was ultimately bypassed by the clastics only during the Oligocene and Neogene, once (1) the prograding clastic wedge had exceeded accommodation, and (2) the long lasting thermal subsidence of the passive margin could overpass the effect of the bending and force the former bulge to sink.;Numerous paleo-thermo-meters (Tmax, Ro), paleo-thermo-barometers (fluid inclusions), PVT and coupled forward kinematic and thermal modeling have been used to calibrate and date the progressive unroofing of the thrust belt. Coupled tectonic and sedimentologic modeling was applied in the foreland to predict the distribution of sand versus shale ratios in the Oligocene to Plio-Quaternary clastic sedimentary wedge of the passive margin, where gravitational gliding of post-Eocene series occurred during the Neogene along major listric faults.;Mantle dynamics are advocated as the main process accounting for post-orogenic uplift and regional tilting of the basement, which initiated a massive transfer of sediments from the Cordillera towards the Gulf of Mexico, from Oligocene onward, resulting in a destabilization and gravitational collapse of the western slope of the Gulf of Mexico in Neogene times.
ISSN: 0040-1951

hal-00445248
https://hal.archives-ouvertes.fr/hal-00445248
DOI : 10.1016/j.tecto.2009.04.012

Éditeur(s) : HAL CCSD MDPI
Résumé : International audience
Canopy height is a key variable in tropical forest functioning and for regional carbon inventories. We investigate the spatial structure of the canopy height of a tropical forest, its relationship with environmental physical covariates, and the implication for tropical forest height variation mapping. Making use of high-resolution maps of LiDAR-derived Digital Canopy Model (DCM) and environmental covariates from a Digital Elevation Model (DEM) acquired over 30,000 ha of tropical forest in French Guiana, we first show that forest canopy height is spatially correlated up to 2500 m. Forest canopy height is significantly associated with environmental variables, but the degree of correlation varies strongly with pixel resolution. On the whole, bottomland forests generally have lower canopy heights than hillslope or hilltop forests. However, this global picture is very noisy at local scale likely because of the endogenous gap-phase forest dynamic processes. Forest canopy height has been predictively mapped across a pixel resolution going from 6 m to 384 m mimicking a low resolution case of 3 points·km −2. Results of canopy height mapping indicated that the error for spatial model with environment effects decrease from 8.7 m to 0.91 m, depending of the pixel resolution. Results suggest that, outside the calibration plots, the contribution of environment in shaping the global canopy height distribution is quite limited. This prevents accurate canopy height mapping based only on environmental information, and suggests that precise canopy height maps, for local management purposes, can only be obtained with direct LiDAR monitoring.
ISSN: 2072-4292

hal-01590726
https://hal-univ-guyane.archives-ouvertes.fr/hal-01590726
https://hal-univ-guyane.archives-ouvertes.fr/hal-01590726/document
https://hal-univ-guyane.archives-ouvertes.fr/hal-01590726/file/remotesensing-08-00747.pdf
DOI : 10.3390/rs8090747

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Seismic anisotropy originating within the continental crust is used to determine kinematic flow lines within active mountain belts and is widely attributed to regionally aligned mica. However, naturally deformed micaceous rocks commonly show composite (e.g. S-C) fabrics. It is necessary therefore to understand how both varying mica content and differing intensities of multiple foliations impact on seismic interpretations in terms of deformation fields. An outcrop analogue for granitic mid-crustal deformed zones is used here to calibrate the seismic response against both parameters. Seismic responses are modelled using crystallographic preferred orientations for polymineralic, micaceous granitic gneisses, measured using Electron Back-Scatter Diffraction. The sample results are generalised by modelling the effects of variations in modal composition and the relative importance of deformation fabrics of variable orientation, so-called rock and fabric recipes. The maximum P- and S-anisotropy are calculated at 16.6% and 23.9% for single-foliation gneisses but for mixed (i.e. S-C) foliation gneisses these values reduce to 5.8% and 7.5% respectively. Furthermore, mixtures of multiple foliations generate significant variations in the geometry of the seismic anisotropy. This effect, coupled with the geographical orientation of fabrics in nature. can generate substantial variations in the orientation and magnitude of seismic anisotropy (especially for shear waves) as measured for the continental crust using existing receiver function and teleseismic near-vertical incidence methods. Thus, maps of seismic anisotropy varying with depth in deforming continents need not imply necessarily depth-varying deformation kinematics and tectonic decoupling.
ISSN: 0012-821X

hal-00445247
https://hal.archives-ouvertes.fr/hal-00445247
DOI : 10.1016/j.epsl.2009.09.035

Éditeur(s) : HAL CCSD EDP Sciences
Résumé : International audience
The dynamic model of plant growth GreenLab describes plant architecture and functional growth at the level of individual organs. Structural development is controlled by formal grammars and empirical equations compute the amount of biomass produced by the plant, and its partitioning among the growing organs, such as leaves, stems and fruits. The number of organs initiated at each time step depends on the trophic state of the plant, which is evaluated by the ratio of biomass available in plant to the demand of all the organs. The control of the plant organogenesis by this variable induces oscillations in the simulated plant behaviour. The mathematical framework of the GreenLab model allows to compute the conditions for the generation of oscillations and the value of the period according to the set of parameters. Two case-studies are presented, corresponding to emergence of oscillations associated to fructification and branching. Similar alternating patterns are commonly reported by botanists. In this article, two examples were selected: alternate patterns of fruits in cucumber plants and alternate appearances of branches in Cecropia trees. The model was calibrated from experimental data collected on these plants. It shows that a simple feedback hypothesis of trophic control on plant structure allows the emergence of cyclic patterns corresponding to the observed ones.
ISSN: 0973-5348

hal-00780592
https://hal-ecp.archives-ouvertes.fr/hal-00780592
https://hal-ecp.archives-ouvertes.fr/hal-00780592/document
https://hal-ecp.archives-ouvertes.fr/hal-00780592/file/Mathieu_2012_Published_mmnp201276p47.pdf
DOI : 10.1051/mmnp/20127603

Éditeur(s) : Cambridge Univ Press
Résumé : This paper offers a theoritical and empirical model of ecosystem-based fishery management. A multi-species and multi-fleet integrating Lotka-Volterra trophic dynamics as well as production and profit assessments is developed and applied to the coastal fishery of French Guiana. This small-scale fishery constitutes a challenging example with high fish biodiversity, several non-selective fleets and a potentially increasing local food demand due to demographic growth. The dynamic model is calibrated with 13 species and four fleets using monthly catch and effort data from 2006 to 2009. Several contrasted fishing scenarios including status quo, total closure, economic and viable strategies are then simulated. They are compared from the viewpoints of both biodiversity preservation and socioeconomic performance, assuming fixed landing prices and fixed costs. We show that fishing outputs, including food supply and fleet profitability, can be sustained on average but a loss of species cannot be avoided.
Environment And Development Economics (1355-770X) (Cambridge Univ Press), 2013-06 , Vol. 18 , P. 245-269

Droits : Cambridge University Press 2013
http://archimer.ifremer.fr/doc/00124/23483/21311.pdf
http://archimer.ifremer.fr/doc/00124/23483/21375.pdf
DOI:10.1017/S1355770X13000065
http://archimer.ifremer.fr/doc/00124/23483/

Éditeur(s) : Elsevier Sci Ltd
Résumé : A multi-scale global hindcast of ocean waves is presented that covers the years 1994-2012, based on recently published parameterizations for wind sea and swell dissipation [Ardhuin, F., Rogers, E., Babanin, A., Filipot, J.-F., Magne, R., Roland, A., van der Westhuysen, A., Queffeulou, P., Lefevre, J.-M., Aouf, L., Collard, F., 2010. Semi-empirical dissipation source functions for wind-wave models: Part I. Definition, calibration and validation. J. Phys. Oceanogr. 40 (9), 1917-1941]. Results from this hindcast include traditional wave parameters, like the significant wave height and mean periods, and we particularly consider the accuracy of the results for phenomenal sea states, with significant heights above 14 m. Using unbiased winds, there is no evidence of a bias in wave heights even for this very high range. Various spectral moments were also validated, including the surface Stokes drift and mean square slopes that are relevant for wave-current interactions modelling and remote sensing, and also spectra of seismic noise sources. The estimation of these parameters is made more accurate by the new wave growth and dissipation parameterizations. Associated air-sea fluxes of momentum and energy are significantly different from what is obtained with the WAM-Cycle 4 parameterization, with a roughness that is practically a function of wind speed only. That particular output of the model does not appear very realistic and will require future adjustments of the generation and dissipation parameterizations.
Ocean Modelling (1463-5003) (Elsevier Sci Ltd), 2013-10 , Vol. 70 , P. 174-188

Droits : 2012 Elsevier Ltd. All rights reserved.
http://archimer.ifremer.fr/doc/00155/26582/25477.pdf
DOI:10.1016/j.ocemod.2012.12.001
http://archimer.ifremer.fr/doc/00155/26582/

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
In this paper, we propose a benchmarking of supervised machine learning techniques (neural networks, Gaussian processes and support vector machines) in order to forecast the Global Horizontal solar Irradiance (GHI). We also include in this benchmark a simple linear autoregressive (AR) model as well as two naive models based on persistence of the GHI and persistence of the clear sky index (denoted herein scaled persistence model). The models are calibrated and validatedwith data from three French islands: Corsica (41.91°N; 8.73°E), Guadeloupe (16.26°N; 61.51°W) and Reunion (21.34°S ; 55.49°E). The main findings of this work are, that for hour ahead solar forecasting,the machine learning techniques slightly improve the performances exhibited by the linear AR and the scaled persistence model. However, the improvement appears to be more pronounced in case of unstable sky conditions.These nonlinear techniques start to outperform their simple counterparts for forecasting horizons greater than one hour.
ISSN: 0038-092X

Droits : info:eu-repo/semantics/OpenAccess
hal-01099211
https://hal.archives-ouvertes.fr/hal-01099211
https://hal.archives-ouvertes.fr/hal-01099211/document
https://hal.archives-ouvertes.fr/hal-01099211/file/Manuscript_Lauretetal_Rev_unmarked.pdf

Éditeur(s) : HAL CCSD
Résumé : International audience
The Heliosat-II method was developed to process Meteosat satellite images in order to assess the solar irradiation at surface. It is modified for its use with GOES satellite images in order to estimate the solar irradiation over French Guiana.Modifications include a change in the calibration formula, in the calculation of the cloud albedo, and in the values of the Linke turbidity factor. These modifications allow the improvement of the performances of the Heliosat-II model in Intertropical zones in French Guiana. The outcomes were compared to coincident measurements of hourly irradiation performed by ground stations.The results show that the use of the maximum apparent albedo as the cloud albedo (ρcmax), along with a fixed value of the Linke turbidity factor produces the best results; the bias was less than 23.61 Wh/m2 (5% of the mean value of the measurements) overall, and the RMSE was less than 109.39 W/m2 (24%) overall when using hourly values. In the case of daily means, the RMSE drops to less than 10.08 W/m2 (10%) overall, whereas the overall bias remains unchanged, as expected. The model performs better in clear skies than in cloudy skies. The results suggest that the Linke turbidity factor used in the Heliosat-II method does not reproduce well the attenuation of the solar radiation in French Guiana. The results were compared to those obtained from Heliosat II method and Meteosat images (HelioClim-3 database) and we found a better accuracy for GOES satellite data, which exhibits smaller viewing angle. The use of the Heliosat II method with GOES images allows assessment of the SSI with a good accuracy and high temporal and spatial resolutions.
Canadian Journal of Remote Sensing

meteo-01304576
https://hal-meteofrance.archives-ouvertes.fr/meteo-01304576
DOI : 10.1080/07038992.2015.1040876

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
The Taiwan area, where the Philippine Sea Plate collides with Eurasia, is one of the most seismically active areas in the world and has been consequently struck repeatedly by destructive earthquakes. To better constrain the occurrence of large earthquakes, we have conducted two cruises in 2012 and 2013 from which five piston, gravity and box-cores were retrieved from selected sites in targeted areas that contain continuous and accurate turbidite deposition offshore eastern Taiwan. Forty-seven turbidite layers deposited between 675 BC and 2012 AD have been described in the cores with facies varying from silty clay to coarse sand. We modeled each turbidite layer using the sedimentation rate deduced from radiocarbon age measurements performed on planktonic foraminifers. Precise dating based on 210Pb–137Cs chronology provided ages for the XXth century turbidites. Coring sites' locations, biotic association within turbidites beds and seismic calibration over the instrumental period, suggest that earthquakes are the most likely triggering mechanisms of turbidity currents over the last 2700 years. Calibration of correlations between turbidites and instrumental earthquakes allowed us to determine the minimum magnitude of recorded events (Mw = 6.8) and the maximum distance between the epicenter and the slope failure. Turbidites' synchroneity between cores has been tested but results showed that this criterion cannot be used in our study area because of the high level of seismicity, i.e., a M > 6.8 earthquake recurrence interval much smaller than the uncertainty on radiocarbon ages. The excellent accuracy of dating allows correlating all the turbidites deposited since 1920 with instrumental earthquakes. For each core, we established a return time ranging between 112 and 147 years for the period pre-1900 and ~ 27 and 34 years for the period post-1900. The discrepancy between pre-1900 and post-1900 recurrence either suggests, that slope stability varies, with higher slope instability after 1900 possibly due to increased sediment delivery by rivers.
ISSN: 0040-1951

hal-01467627
https://hal.archives-ouvertes.fr/hal-01467627
DOI : 10.1016/j.tecto.2016.04.030

Éditeur(s) : HAL CCSD Oxford University Press (OUP)
Résumé : International audience
We investigate the deformation induced by water pressure variations in hydrologically active natural fractures, and recorded by tiltmeters and strainmeters. The deformation associated with a single fracture is derived using finite-element modelling (FEM). A range in fracture geometries is explored, first to highlight the sensitivity of each geometrical parameter to the deformation, and secondly to allow transfer to observation sites. Water level variations in the fracture are then derived from a hydrological model, driven by observed rainfall, and calibrated on fracture water flow measurements. The modelling results are explicitly applied to constrain the local hydrological contribution to observations with the 100-m-long hydrostatic tiltmeter installed at Sainte-Croix-aux-Mines (France). Our study shows that well-founded physical modelling of local hydrological effect allows a substantial correction of records in observatories.
ISSN: 0956-540X

hal-00708093
https://hal.archives-ouvertes.fr/hal-00708093
https://hal.archives-ouvertes.fr/hal-00708093/document
https://hal.archives-ouvertes.fr/hal-00708093/file/fracture_v72.pdf
BIBCODE : 2009GeoJI.178..667L

Éditeur(s) : HAL CCSD American Geophysical Union
Résumé : International audience
We present the results of a paleomagnetic study of seven new volcanic sections (146 flows) from Kerguelen Archipelago. For two of these sections, preliminary (;40;Ar/;39;Ar) ages are reported to aid in the calibration of the paleomagnetic results. The primary contribution of this report, however, is a compilation of these new data with those already published in order to describe statistically the characteristics of the paleomagnetic field as recorded by the Kerguelen flood basalts. In total, 258 paleomagnetic directions sampled at 13 stratigraphic sections through the lava pile are available and span an approximately 5 Ma window: from 25 to 30 Ma. The composite section represents at least 11 polarity zones that are correlated to the reference geomagnetic polarity timescale. Our approach is to investigate the average normal and reversed polarity field directions over this 5 Ma window. We calculated a paleomagnetic pole found to be located at ;λ; = 85.5°N, = 189.3°E (A;95; = 2.3°, K = 16.5, N = 233). This pole is in close agreement with the coeval paleomagnetic poles obtained from different worldwide places when analyzed in the Indo-Atlantic hot spot reference frame. In the statistical analysis we tackle the specific question: Is the secular variation isotropic? This question is directly related to the occurrence of a longitudinal confinement of the virtual geomagnetic poles, which is still a matter of debate among paleomagnetists. By means of statistical tests we show that the paleomagnetic data from Kerguelen agree with an isotropic model for paleosecular variation. Finally, we present adjustments to Camps and Prévot's (1996) statistical model, developed for some Northern Hemisphere latitudes, to the Southern Hemisphere paleomagnetic data from Kerguelen.
ISSN: 0148-0227

hal-00407636
https://hal.archives-ouvertes.fr/hal-00407636
https://hal.archives-ouvertes.fr/hal-00407636/document
https://hal.archives-ouvertes.fr/hal-00407636/file/pcamps-JGR2007.pdf
DOI : 10.1029/2006JB004648

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : Tangential strains were measured with strain gauges at the surface of xylem and inner bark of saplings of Cryptomeria japonica D. Don. and Fagus silvatica L. during a pressurization test. The test consists in submitting the whole sapling to an artificially imposed hydrostatic pressure of increasing magnitude. The elastic response of the stems was found linear both at the surface of xylem and inner bark. A simple geometric model allows to compute radial strains in each tissue from tangential strain data. Inside inner bark, radial strains are much larger than tangential strains, because tangential strains are restrained by the core of wood. The material compliance of each tissue was computed as the ratio between the radial strain and the pressure that caused it. The material compliance of xylem is much lower than that of inner bark, but, as its thickness is much larger, its contribution to the apparent behavior of the stem is not negligible. Computation of material compliances by this pressurization test provides information about the specific behavior of each tissue in response to hydrostatic pressure. This can be used to estimate and interpret the calibration factor linking the water status of the plant to the apparent strain measured at its surface.
ISSN: 0931-1890

hal-01031900
https://hal.archives-ouvertes.fr/hal-01031900
DOI : 10.1007/s00468-006-0061-7

Éditeur(s) : HAL CCSD eLife Sciences Publication
Résumé : When 2 Mha of Amazonian forests are disturbed by selective logging each year, more than 90 Tg of carbon (C) is emitted to the atmosphere. Emissions are then counterbalanced by forest regrowth. With an original modelling approach, calibrated on a network of 133 permanent forest plots (175 ha total) across Amazonia, we link regional differences in climate, soil and initial biomass with survivors' and recruits' C fluxes to provide Amazon-wide predictions of post-logging C recovery. We show that net aboveground C recovery over 10 years is higher in the Guiana Shield and in the west (21 +/- 3 Mg C ha(-1)) than in the south (12 +/- 3 Mg C ha(-1)) where environmental stress is high (low rainfall, high seasonality). We highlight the key role of survivors in the forest regrowth and elaborate a comprehensive map of post-disturbance C recovery potential in Amazonia.
ISSN: 2050-084X

hal-01606806
https://hal.archives-ouvertes.fr/hal-01606806
DOI : 10.7554/eLife.21394
PRODINRA : 389858

Éditeur(s) : HAL CCSD
Résumé : International audience
BackgroundTree above ground biomass (AGB) is currently estimated by tree-level allometrical models that take into account, tree volume estimated from proxy variables of tree size (DBH) and species average wood specific gravity (WSG). These methods are common and realistic from a practical point of view. However, they do not take into account deviance from fixed allometrical trajectories and species or tree level WSG variations. Here, we present Xtrawood software that allows computation of tree AGB according to structure and WSG variations.MethodXtrawood reconstructs tree structure and integrates WSG variations by merging tree structure and WSG data measured at different position in trees, leading to the computation of global AGB and visualization of WSG variation along tree structure. Tree structure is measured according to stem dimensions (length, diameter) and positions within tree, and encoded in Multiscale Tree Graph format (MTG). WSG data is made of radial WSG profiles (1 measure each 0,5 cm from pith to bark) sampled at different heights within whole tree. Xtrawood output are illustrated using a dataset collected on an Amazonian forest ‘biomass dominant species’, Dicorynia guianensis Amsh., also known to exhibit substantial WSG gradients along both radial and vertical axis. 9 trees ranging from 15 to 60 cm DBH were measured by climbers. Each tree was felled and samples were collected at different positions (3 in trunk, 1 to 5 in crown) to record WSG radial profiles.ResultsXtrawood allows computation of tree volume, but also visualization of WSG variations in tree as well as inference of WSG radial profiles at different heights. Output variables are decomposed according to different tree scale and locations (axis, trunk/crown) and easy to extract. Xtrawood results will be compared to those of standard estimation method and can be used to identify positions in trees where WSG value leads to the better estimate of tree AGB.Conclusion/perspectiveXtrawood produces AGB estimate with data from intensive measurements practices. The sampling protocol, used here, remains destructive and time-consuming because Xtrawood is not directly dedicated to forest managers, but to help calibration of realistic sampling strategies. Moreover, Xtrawood offers a way to understand relationships between tree development, WSG variations within tree structure and biomass accumulation in the context of natural forests or plantations. A software demo is available at coffee break.
53rd Annual Meeting of the Association for Tropical Biology and Conservation (ATBC 2016)
Montpellier, France

Droits : http://creativecommons.org/licenses/by/
hal-01349613
https://hal.archives-ouvertes.fr/hal-01349613