Éditeur(s) : HAL CCSD Ecological Society of America
Résumé : Line transect surveys are widely used in neotropical rainforests to estimate the population abundance of medium- and large-sized vertebrates. The use of indices such as Encounter Rate has been criticized because the probability of animal detection may fluctuate due to the heterogeneity of environmental conditions among sites. In addition, the morphological and behavioral characteristics (biological traits) of species affect their detectability. In this study, we compared the extent to which environmental conditions and species' biological traits bias abundance estimates in terra firme rainforests in French Guiana. The selected environmental conditions included both physical conditions and forest structure covariates, while the selected biological traits included the morphological and behavioral characteristics of species. We used the distance sampling method to model the detection probability as an explicit function of environmental conditions and biological traits and implemented a model selection process to determine the relative importance of each group of covariates. Biological traits contributed to the variability of animal detectability more than environmental conditions, which had only a marginal effect. Detectability was best for large animals with uniform or disruptive markings that live in groups in the canopy top. Detectability was worst for small, solitary, terrestrial animals with mottled markings. In the terra firme rainforests which represent ~80% of the Amazonia and Guianas regions, our findings support the use of relative indices such as the encounter rate to compare population abundance between sites in species-specific studies. Even though terra firme rainforests may appear similar between regions of Amazonia and the Guianas, comparability must be ensured, especially in forests disturbed by human activity. The detection probability can be used as an indicator of species' vulnerability to hunting and, thus, to the risk of local extinction. Only a few biological trait covariates are required to correctly estimate the detectability of the majority of medium- and large-sized vertebrates. Thus, a biological trait model could be useful in predicting the detection probabilities of rare, uncommon or localized species for which few data are available to fit the detection function.
ISSN: 1051-0761

hal-01555267
https://hal.archives-ouvertes.fr/hal-01555267
DOI : 10.1002/eap.1549
PRODINRA : 396614
PUBMED : 28419598

Éditeur(s) : Elsevier
Résumé : The distribution and speciation of mercury (Hg) in the water column, the inputs (wet deposition and tributaries) and the outputs (atmospheric evasion and outlet) of an artificial partially anoxic tropical lake (Petit-Sa-Lit reservoir, French Guiana) were investigated oil a seasonal basis in order to appraise the cycling and transformations of this metal. The total mercury (HgT) concentrations in the oxygenated epilimnetic waters averaged 5 +/- 3 pmol L-1 in the unfiltered samples (HgTUNF) and 4 +/- 2 pmol L-1 in the dissolved (HgTD) phase (< 0.45 mu m). On average, the monomethylmercury (MMHg) constituted 8%, 40%, and 18% of the HgT in the dissolved phase, tile particulate suspended matter and in tile unfiltered samples, respectively. Covariant elevated concentrations of particulate MMHg and chlorophyll a in the epilimnion suggest that phytoplankton is ail active component for the MMHg transfer in tile lake. In the anoxic hypolimnion the HgTUNF averages 13 +/- 6 pmol L-1 and tile HgTD 8 +/- 4 pmol L-1. The averages of MMHgP and MMHgD in hypolimnetic waters were two and three times the corresponding values of the epilimnion, 170 +/- 90 pmol g(-1) and 0.9 +/- 0.5 pmol L-1, respectively. In the long dry and wet seasons, at the flooded forest and upstream dam sampling stations, the vertical profiles of MMHgD concentrations accounted for two distinct maxima: one just below the oxycline and the other near the benthic interface. Direct wet atmospheric deposition accounted for 14 moles yr(-1) HgTUNF, with 0.7 moles yr(-1) as MMHgUNF, while circa 76 moles yr(-1) of HgTUNF, with 4.7 moles yr(-1) as MMHgUNF, coming from tributaries. Circa 78 moles (similar to 17% as MMHg) are annually exported through tile dam, while 23 moles yr(-1) of Hg-0 evolve in the atmosphere. A mass balance calculation suggests that the endogenic production of MMHgUNF attained 8.1 moles yr(-1), corresponding to a methylation rate of 0.06% d(-1). As a result, tile Petit-Saut reservoir is a large man-made reactor that has extensively altered mercury speciation in favor of methylated species.
Applied Geochemistry (0883-2927) (Elsevier), 2008-05 , Vol. 23 , N. 5 , P. 1101-1126

Droits : 2008 Elsevier Ltd All rights reserved.
http://archimer.ifremer.fr/doc/2008/publication-4198.pdf
DOI:10.1016/j.apgeochem.2007.11.006
http://archimer.ifremer.fr/doc/00000/4198/

Éditeur(s) : HAL CCSD MDPI
Résumé : International audience
Canopy height is a key variable in tropical forest functioning and for regional carbon inventories. We investigate the spatial structure of the canopy height of a tropical forest, its relationship with environmental physical covariates, and the implication for tropical forest height variation mapping. Making use of high-resolution maps of LiDAR-derived Digital Canopy Model (DCM) and environmental covariates from a Digital Elevation Model (DEM) acquired over 30,000 ha of tropical forest in French Guiana, we first show that forest canopy height is spatially correlated up to 2500 m. Forest canopy height is significantly associated with environmental variables, but the degree of correlation varies strongly with pixel resolution. On the whole, bottomland forests generally have lower canopy heights than hillslope or hilltop forests. However, this global picture is very noisy at local scale likely because of the endogenous gap-phase forest dynamic processes. Forest canopy height has been predictively mapped across a pixel resolution going from 6 m to 384 m mimicking a low resolution case of 3 points·km −2. Results of canopy height mapping indicated that the error for spatial model with environment effects decrease from 8.7 m to 0.91 m, depending of the pixel resolution. Results suggest that, outside the calibration plots, the contribution of environment in shaping the global canopy height distribution is quite limited. This prevents accurate canopy height mapping based only on environmental information, and suggests that precise canopy height maps, for local management purposes, can only be obtained with direct LiDAR monitoring.
ISSN: 2072-4292

hal-01590726
https://hal-univ-guyane.archives-ouvertes.fr/hal-01590726
https://hal-univ-guyane.archives-ouvertes.fr/hal-01590726/document
https://hal-univ-guyane.archives-ouvertes.fr/hal-01590726/file/remotesensing-08-00747.pdf
DOI : 10.3390/rs8090747

Éditeur(s) : HAL CCSD
Résumé : International audience
OBJECTIVE: Contemporary pesticides, such as triazines or organophosphates, possess immunotoxic properties. We aimed to determine whether prenatal environmental exposure to these current-use pesticides was associated with otitis media (OM) during the first 2 years of life among children from the PELAGIE mother-child cohort. METHODS: The PELAGIE cohort enrolled 3421 women at the beginning of pregnancy in Brittany (France). At the 2-year follow-up, 1505 families completed a self-administered questionnaire, including the domestic use of pesticides and consumption of organic diet during pregnancy and occurrences of OM in the child. Two health outcomes were considered: at least one OM and recurrent OM (at least three). Multivariate logistic regression models that adjusted for known risk factors of OM were performed. Metabolites of triazine herbicides and organophosphate insecticides measured in urine collected before the 19th week of gestation (248 mothers) were considered in a subgroup analysis. Multiple imputation was used to handle missing values for the covariates. RESULTS: Children whose mothers reported an organic diet during pregnancy had a reduced risk of OM (at least one episode, p trend=0.01). No association was found between any outcome and residential proximity to crops. The presence in maternal urine of dealkylated triazine metabolites (OR=2.12 (1.01 to 4.47)) was positively associated with recurrent OM. CONCLUSIONS: To the best of our knowledge, this is the first work to suggest a positive association between prenatal exposure to current-use pesticides and the occurrence of parent-reported OM in young children
Occupational and Environmental Medicine

hal-01201944
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01201944
DOI : 10.1136/oemed-2015-103039
PUBMED : 26347056

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Mapping spatial distributions of disease occurrence can serve as a useful tool for identifying exposures of public health concern. Infant mortality is an important indicator of the health status of a population. Recent literature suggests that neighborhood deprivation status can modify the effect of air pollution on preterm delivery, a known risk factor for infant mortality. We investigated the effect of neighborhood social deprivation on the association between exposure to ambient air NO2 and infant mortality in the Lille and Lyon metropolitan areas, north and center of France, respectively, between 2002 and 2009. We conducted an ecological study using a neighborhood deprivation index estimated at the French census block from the 2006 census data. Infant mortality data were collected from local councils and geocoded using the address of residence. We generated maps using generalized additive models, smoothing on longitude and latitude while adjusting for covariates. We used permutation tests to examine the overall importance of location in the model and identify areas of increased and decreased risk. The average death rate was 4.2‰ and 4.6‰ live births for the Lille and Lyon metropolitan areas during the period. We found evidence of statistically significant precise clusters of elevated infant mortality for Lille and an east-west gradient of infant mortality risk for Lyon. Exposure to NO2 did not explain the spatial relationship. The Lille MA, socioeconomic deprivation index explained the spatial variation observed. These techniques provide evidence of clusters of significantly elevated infant mortality risk in relation with the neighborhood socioeconomic status. This method could be used for public policy management to determine priority areas for interventions. Moreover, taking into account the relationship between social and environmental exposure may help identify areas with cumulative inequalities.
ISSN: 0048-9697

inserm-00838330
http://www.hal.inserm.fr/inserm-00838330
DOI : 10.1016/j.scitotenv.2013.03.027
PUBMED : 23563257

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
While vertical motion induced by long-term geological loads is often used to estimate the flexural rigidity of the lithosphere, we intend to evaluate the shear rigidity of the lithosphere using horizontal motion. Our approach considers that the rigidity of the lithosphere may be defined as its resistance to horizontal tectonic lateral forces. In this case, a spatial distribution of an effective shear rigidity can be estimated from the analysis of the interseismic velocity fields. We consider the Western United States zone where weakly strained areas (e.g., the Sierra Nevada) are connected with areas of large strain rate (e.g. San Andreas Fault system). By inverting interseismic strain distribution measured by geodetic methods, we infer the effective shear rigidity of the lithosphere. The forward problem is defined using the equations of linear elasticity. The inversion relies on the minimization of the sum of a quadratic measure of the differences between measured and modelled velocity fields. The functional also includes regularization terms for the parameters of the model. The gradient of the functional with respect to the minimization parameters is computed using an adjoint formulation. This permits the treatment of large dimensional minimization problems. Finally, a measure of the uncertainty of our inversion is illustrated through the covariance matrix of the parameters at the optimum. The optimization chart is validated on two synthetic velocity distributions. Then, the effective shear rigidity variations of the Western United States are estimated using the CMM3 interseismic velocities. The inversion displays low effective rigidities along the San Andreas Fault system, the Mojave Desert and in the Eastern California Shear Zone, while rigid areas are found in the Sierra Nevada and in the South Basin and Range. Finally, we discuss the differences between our strain rate and rigidity maps with previously published results for the Western United States.
ISSN: 0040-1951

Droits : http://hal.archives-ouvertes.fr/licences/copyright/
hal-01505024
https://hal.archives-ouvertes.fr/hal-01505024
https://hal.archives-ouvertes.fr/hal-01505024/document
https://hal.archives-ouvertes.fr/hal-01505024/file/Paper_tectophysics.pdf
DOI : 10.1016/j.tecto.2017.03.015

Éditeur(s) : HAL CCSD Wiley
Résumé : 1. Trade-offs among functional traits reveal major plant strategies that can give insight into species distributions and ecosystem processes. However, current identification of plant strategies lacks the integration of root structural traits together with leaf and stem traits. 2. We examined correlations among 14 traits representing leaf, stem and woody root tissues. Traits were measured on 1084 individuals representing 758 Neotropical tree species, across 13 sites representative of the environmental variation encompassed by three widespread habitats (seasonally flooded, clay terra firme and white-sand forests) at opposite ends of Amazonia (French Guiana and Peru). 3. Woody root traits were closely aligned with stem traits, but not with leaf traits. Altogether leaf, stem and woody root traits delineated two orthogonal axes of functional trade-offs: a first axis defined by leaf traits, corresponding to a leaf economics spectrum, and a second axis defined by covarying stem and woody root traits, corresponding to a wood economics spectrum. These axes remained consistent when accounting for species evolutionary history with phylogenetically independent contrasts. 4. Despite the strong species turnover across sites, the covariation among root and stem structural traits as well as their orthogonality to leaf traits were strongly consistent across habitats and regions. 5. We conclude that root structural traits mirrored stem traits rather than leaf traits in Neotropical trees. Leaf and wood traits define an integrated whole-plant strategy in lowland South American forests that may contribute to a more complete understanding of plant responses to global changes in both correlative and modelling approaches. We suggest further meta-analyses in expanded environmental and geographic zones to determine the generality of this pattern.
ISSN: 0269-8463

hal-01032415
https://hal.archives-ouvertes.fr/hal-01032415
DOI : 10.1111/j.1365-2435.2012.02020.x

Éditeur(s) : HAL CCSD Wiley
Résumé : The intensification of the hydrological cycle, with an observed and modeled increase in drought incidence and severity, underscores the need to quantify drought effects on carbon cycling and the terrestrial sink. FLUXNET, a global network of eddy covariance towers, provides dense data streams of meteorological data, and through flux partitioning and gap filling algorithms, estimates of net ecosystem productivity (FNEP), gross ecosystem productivity (P), and ecosystem respiration (R). We analyzed the functional relationship of these three carbon fluxes relative to evaporative fraction (EF), an index of drought and site water status, using monthly data records from 238 micrometeorological tower sites distributed globally across 11 biomes. The analysis was based on relative anomalies of both EF and carbon fluxes and focused on drought episodes by biome and climatic season. Globally P was ≈50% more sensitive to a drought event than R. Network-wide drought-induced decreases in carbon flux averaged −16.6 and −9.3 g C m−2 month−1 for P and R, i.e., drought events induced a net decline in the terrestrial sink. However, in evergreen forests and wetlands drought was coincident with an increase in P or R during parts of the growing season. The most robust relationships between carbon flux and EF occurred during climatic spring for FNEP and in climatic summer for P and R. Upscaling flux sensitivities to a global map showed that spatial patterns for all three carbon fluxes were linked to the distribution of croplands. Agricultural areas exhibited the highest sensitivity whereas the tropical region had minimal sensitivity to drought. Combining gridded flux sensitivities with their uncertainties and the spatial grid of FLUXNET revealed that a more robust quantification of carbon flux response to drought requires additional towers in all biomes of Africa and Asia as well as in the cropland, shrubland, savannah, and wetland biomes globally.
ISSN: 1354-1013

hal-01032076
https://hal.archives-ouvertes.fr/hal-01032076
DOI : 10.1111/j.1365-2486.2009.01991.x

Éditeur(s) : HAL CCSD
Résumé : Juin 2003
Dans le contexte actuel de mondialisation, de changement climatique et de forte anthropisation de la biosphère, les Petites Antilles s'érigent en monde marginal ou encore en anti-monde. Fracturées du point de vue politique, économique, linguistique et à certains égards culturel, ces territoires insulaires du Bassin caraïbe recèlent de richesses environnementales (physiques, écosystèmiques et paysagères). Comme partout ailleurs dans le monde humanisé, la survie de ces sociétés implique le rétablissement des grands équilibres écologiques consubstantiels à une articulation efficiente entre le naturel, l'urbain et l'agricole. Compte tenu de la pression démographique, variable d'une île à l'autre, la pérennité des écosystèmes en covariance avec un développement économique profitant au plus grand nombre ne peut se concevoir à l'échelle insulaire. Il semble judicieux d'imaginer un développement à l'échelle de l'archipel basé sur la complémentarité, puisque au sein de chaque composante les diverses ressources biologiques terrestres et marines sont insuffisantes pour assurer une autosuffisance en termes de produits de premières nécessités et d'énergie. Le développement des Petites Antilles s'il doit être durable et prendre comme ossature les directives de Rio (Brésil, 1992) et de Johannesburg (Afrique du Sud, 2002), il devra s'inscrire dans une gestion administrative, scientifique, technique et agricole commune dans le cadre d'une Caraïbe fonctionnellement unifiée. A l'unité floristique, faunistique et biocénotique doivent correspondre des stratégies et donc des politiques, similaires mais diversifiées, d'utilisation des ressources abiotiques (énergie éolienne, hydroélectrique et photovoltaïque) et biotiques (écosystèmes terrestres et marins, flore, faune, sols). Malheureusement dans le présent, la compartimentation économique et politique de la Caraïbe rend ces propos profondément utopiques. Néanmoins dans le futur la survie des peuples des Petites Antilles, impliquera un développement durable signifié par des rapports équilibrés entre hommes et milieux.
–––––
In the nowadays context of "globalization", climatic variation and great anthropization of the biosphere, the Lesser Antilles appear as a marginal world. In a political point of view, those islands offer a greatly distinct and fractured image. The same fact can also be observed in an economic, linguistic and, in a certain measure, cultural perspective. Despite of such a statement, those territories of the Caribbean basin keep economic and landscape resources whom survival depends on the re-establishment of the great ecologic structures implying a productive articulation between the natural, the urban and the agricultural. It seems pertinent to imagine a development on the level of the archipelago based upon complementarity since each constituent presents a limited number of earth and marine biologic reserves which do not guarantee an autosubsistance in energy and first nessecity productivity. A lasting development of the Lesser Antilles supposes a necessary and commun administrative, scientific, technical and agricultural management within the setting of a Caribbean functionally unified. Facing the biocenotic unity, a useful strategy, based on a similar and diversified organization in the exploitation of biophisic resources, must be erected. Such statements could be considered as utopic, regarding the situation of politic and economic division in the Caribbean nowadays. However, in the future, the survival of those insular societies will imply a lasting development lying upon an efficient relationship between Man and environment.
https://halshs.archives-ouvertes.fr/halshs-00003054

Droits : info:eu-repo/semantics/OpenAccess
halshs-00003054
https://halshs.archives-ouvertes.fr/halshs-00003054
https://halshs.archives-ouvertes.fr/halshs-00003054/document
https://halshs.archives-ouvertes.fr/halshs-00003054/file/Devpt-durable_JOSEPH-PHILIPPE.pdf

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
We have measured simultaneously the methane (CH4) and carbon dioxide (CO2) surface concentrations and water–air fluxes by floating chambers (FC) in the Petit-Saut Reservoir (French Guiana) and its tidal river (Sinnamary River) downstream of the dam, during the two field experiments in wet (May 2003) and dry season (December 2003). The eddy covariance (EC) technique was also used for CO2 fluxes on the lake. The comparison of fluxes obtained by FC and EC showed little discrepancies mainly due to differences in measurements durations which resulted in different average wind speeds. When comparing the gas transfer velocity (k600) for a given wind speed, both methods gave similar results. On the lake and excluding rainy events, we obtained an exponential relationship between k600 and U10, with a significant intercept at 1.7 cm h− 1, probably due to thermal effects. Gas transfer velocity was also positively related to rainfall rates reaching 26.5 cm h−1 for a rainfall rate of 36 mm h− 1. During a 24-h experiment in dry season, rainfall accounted for as much as 25% of the k600. In the river downstream of the dam, k600 values were 3 to 4 times higher than on the lake, and followed a linear relationship with U10.
ISSN: 0924-7963

hal-00519502
https://hal.archives-ouvertes.fr/hal-00519502
DOI : 10.1016/j.jmarsys.2006.03.019

Éditeur(s) : HAL CCSD
Résumé : More than 15% of Amazon forest has been converted to pastures these last decades. Some authors argued the world’s permanent pastures (30 % of total land) could potentially offset up to 4% of the global GHG emissions, having a carbon (C) storage potential equal to 0.5 Mg C.ha-1.yr-1(Schulze et al 2009). Accordingly, pastures are good candidates to increase soil uptake C in soil while ensuring a basic food production. Here we would like to assess the effects of tropical forest conversion to cattle pasture in the French Amazonia (French Guiana), by following the long-term dynamics of soil C stocks of permanent tropical pastures (Brachiaria humidicola) after deforestation from 1970. A soil inventory campaign was performed to analyse soil C and N stocks (to 1 m depth) along a pasture chronosequence of 6 months to 36 years old pastures and 4 native forest sites (total 24 sites). The annual C sequestration potential demonstrated by the chronosequence, was compared with eddy covariance flux measurements on 2 pastures and one native forest. Our study shows that old (≥ 24 years) tropical pastures resettle the recurrent C storage observed in native forest. These pastures stored between 1.8 ± 0.5 and 5.3 ± 2.1 tC ha-1 yr-1 compared with 2.6 ± 0.5 tC ha-1 yr-1 for the nearby native forest. Our finding show that old tropical pastures accumulate carbon in soil organic matter, particularly in the deep soil layers (0.2-1 m) and without loss of soil fertility. It suggests that such pastures can be exploited by farmers in the long term with appropriate practices (no fire and no overgrazing, but a mixture of grasses and legumes and a grazing rotation plan). Clearly, efforts to curb deforestation are a priority in order to preserve forest biodiversity and C stocks. But it seems now that, in a climate-smart agriculture way, the current challenge is to manage these deforested areas to maintain the productivity of agricultural ecosystems and in the same time their capacity to mitigate GES.
Building tomorrow’s research agenda and bridging the science-policy gap
Montpellier, France

hal-01204231
https://hal.archives-ouvertes.fr/hal-01204231
PRODINRA : 324147

Éditeur(s) : HAL CCSD Elsevier Masson
Résumé : International audience
ISSN: 0168-1923

hal-01086595
https://hal-agroparistech.archives-ouvertes.fr/hal-01086595
DOI : 10.1016/j.agrformet.2009.06.020