Éditeur(s) : Université du Littoral Côte d'Opale (Dunkerque)
Résumé : In the Bay of Biscay and Celtic Sea waters, hake is considered as genetically homogeneous and form a unique stock with identical meristic characteristics. The vertebral mean vary from 50,68 (vertebrae) during the first year of life to 51,11 (vertebrae) for adults. 0-group Merluccius display a rapid growth with significant interannual variability (0.71 mm.day-1 in 2001 versus 0.74 mm.day-1 in 2002). The spawning period occurs in April and the average length on the firth January following the hatching is of 17.3 cm (first seasonal check / increment on the sagittal otolith is located about 0.143 cm from the nucleus). At the end of the first year of life the average length is about 24 cm. The longevity of the species is important and growth parameters (L = 138,24 cm ; K = 0,132) explain natural mortality coefficient of M = 0.21. No difference for growth between male and female has been observed for this stock. The ratio total weight / eviscerated weight is equal to Fc = 1,086. Both male and female have same spatial and bathymetric distribution. Juveniles are found in deep waters (< 17 cm length) and move to coastal waters where they display an average length of (33 cm length). Longer individuals are found in nursery areas where they feed and grow then move to deeper areas to spawn. Nursery areas are numerous and located in the Celtic Sea and in the bay of Biscay. In the bay of Biscay, disturbances resulted from hydrondynamics affect the settlement on the nursery grounds particularly in the southern part of the bay. Diet composition varies with age. Juveniles feed mainly on crustaceans (Euphausia kroni). At the length of 23 cm, individuals feed strictly on fishes. Sizes of preys are proportional with sizes of predators and preys are composed mainly of species that feed and reproduce close to the bottom. Cannibalism has been observed for this specie, and increases with age notably in the northern part of the bay of Biscay and in the Celtic Sea. Main preys are 0-group juveniles. This specie is assumed to be a passive predator catching its preys when they come to feed in the bottom. Although they are punctual, these results have been obtained after studies on the evolution of sizes during the first year of life (daily increments measurements) and on the spawning period parameters (back-calculating). Average length on the firth January following hatching and the position of the first seasonal check on the otolith are based on observations of the sizes on the firth January following hatching (obtained with growth rates and spawning period parameters). The results are similar to those described in previous studies, nevertheless they have to be confirmed with growth and diet composition analyses. A long term study appear essential to determine biological and ecological parameters of this species for sustainable management of the stock.
Les alertes quant à la surexploitation du stock de merlu européen sont nombreuses et récurrentes. Seulement l'estimation du niveau réel de l'état du stock a toujours posé des problèmes du fait de certaines lacunes dans la connaissance de la biologie et de l'écologie de cette espèce. Dans les eaux du golfe de Gascogne et de la mer Celtique, le merlu européen fait partie de la même population génétique et possède les mêmes caractéristiques meristiques. Sa moyenne vertébrale est de 50,68 durant sa première année de vie et évolue pour se stabiliser à 51,11 chez l'adulte. La croissance du merlu durant sa première année de vie et très rapide mais présente une variabilité interannuelle significative (0,71 mm .J-1 en 2001 et 0,74 mm .J-1 en 2002). Sa période de ponte maximale se déroule au mois d'avril et sa longueur au premier janvier suivant sa naissance est de 17,3 cm (la première marque hivernale est positionnée à 0,143 cm du nucléus de la sagittae). Au terme de sa première année de vie le merlu atteint une longueur de 24 cm. Sa longévité est assez longue (23 ans environ) et ses paramètres de croissance (L = 138,24 cm ; K = 0,132) permettent d'estimer son coefficient de mortalité naturelle à M = 0,21. Il n'a pas été établi de croissance différentielle entre sexe chez le merlu dans ces eaux. Le rapport poids total / poids éviscéré a été estimé à Fc = 1,086. Mâles ou femelles, les merlus ont une même répartition spatiale et bathymétrique. En général, ils sont très profonds à leurs stades juvéniles (< 17 cm) et ils se dirigent vers les eaux côtières pour les atteindre à 33 cm de longueur environ. Au-delà de cette taille, les merlus se concentrent au niveau des zones de nourricerie pour s'y alimenter avant de rejoindre les eaux plus profondes pour y pondre. Les zones de nourricerie du merlu sont très nombreuses et sont localisées en mer Celtique et dans le golfe de Gascogne aussi bien dans sa partie sud que dans sa partie nord. Les perturbations importantes dans l'hydrodynamisme du golfe de Gascogne (upwelling) semble influencer les niveaux de colonisation des zones de nourricerie notamment celles situées dans la partie sud du golfe. Le régime alimentaire du merlu évolue avec l'âge. Juvénile, il se nourrit principalement de crustacés (Euphausia krohni) et devient ichtyophage exclusif dès 23 cm de longueur. Le cannibalisme est une réalité chez le merlu et les merlus-proies sont les juvéniles du groupe d'âge G-0. Il s'intensifie avec l'âge notamment dans la partie nord du golfe de Gascogne et en mer Celtique ; Il est très faible dans le sud du golfe de Gascogne. La taille des proies évolue avec la taille du merlu et les poissons proies sont en général des espèces qui vont se nourrir ou se reproduire sur le fond. Ce comportement alimentaire fait que le merlu est un prédateur peu actif et qui attaque ses proies lorsqu'elles viennent sur le fond. Ces résultats, bien qu'ils ne soient que ponctuels, ont été obtenus après avoir déterminé le schéma d'évolution de la longueur du merlu durant sa première année de vie (dénombrement des accroissement journaliers) et des paramètres de sa période de ponte (rétro-calcul).La taille au premier hiver et la position de la première marque hivernale ont été déterminées en relativisant nos observations à l'estimation de la longueur du merlu au premier janvier suivant sa naissance : celle-ci étant obtenue en utilisant le taux de croissance et les paramètres de la période de ponte. Bien que l'ensemble des résultats obtenus, en ce qui concerne la répartition spatiale et les données sur la période de ponte, soient généralement conformes à ceux décrits dans la littérature, il est nécessaire de confirmer ceux concernant la croissance et le régime alimentaire. Pour cela, une étude à plus long terme semble indispensable pour parvenir à bien maîtriser l'ensemble des paramètres de biologie et d'écologie du merlu permettant ainsi une meilleure gestion de son stock.

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/2004/these-1247.pdf
http://archimer.ifremer.fr/doc/00000/1247/

Éditeur(s) : HAL CCSD Society for Industrial and Applied Mathematics
Résumé : International audience
In this paper, we developed a theoretical study for nonconservative sytems in one dimension in order to construct numerical schemes for solving the Riemann problem. The nonconservative form of our model system required the use of a well-adapted theory in order to give us a sense of our problem. We chose a framework of generalized functions for solving a scalar hyperbolic equation with a discontinuous coefficient $sigma_t +usigma_x approx 0$, where u is the velocity solution of a Burgers's equation. After an explicit solution of the Riemann problem, we derived Godunov split schemes for computing an approximate solution of the Cauchy problem. We applied our study to a system modeling elasticity and a system modeling gas dynamics. Some stability properties of a scheme and its convergence to a generalized solution are proved for the first model. Numerical experiments confirmed this convergence result. For the second model, calculations of flows containing weak-to-moderate shocks showed that conservation errors are reduced when the mesh is refined but were not entirely eliminated.
ISSN: 0036-1429

hal-00770266
https://hal.univ-antilles.fr/hal-00770266
DOI : 10.1137/S0036142900378637

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : International audience
In this study, the cellular organization of the gill that harbors symbiotic bacteria is described in the thyasirid Thyasira falklandica collected from South Shetlands in Antarctic. Sections of the gills revealed that T. falklandica belongs to the gill type 3, as described by Dufour (Biol Bull, 208:200-212, 2005), with an elongated lateral zone along the frontal-abfrontal axis of the gill Wlaments. The ciliated and intermediary zones looked similar to those described in symbionts-bearing bivalves. The lateral zone is more complex in T. falklandica than in other Thyasiridae already described. Such a zone is composed of four different cell types. Bacteriocytes are abundant in the frontal and abfrontal positions, while the middle part of the lateral zone is occupied mostly by numerous granule cells devoid of bacteria. All along the lateral zone, TEM and SEM observations show some ciliated cells, which are regularly interspersed between bacteriocytes and/or granule cells. Such cells, according to the long double ciliary roots of their cilia, should have a sensory function. Intercalary cells, which have never been observed between bacteriocytes, are restricted to the middle part of the lateral zone where their expansions overlap the adjacent granule cells. Bacterial symbionts occur only extracellularly among long microvilli diVerentiated by the bacteriocytes. They are abundant, usually spherical in shape (around 0.7 m length), and covered by the glycocalix from bacteriocyte microvilli. According to TEM views, the empty vesicles located in the periplasmic space should be sulfur storage, as known for other sulfur-oxidizing symbionts.
ISSN: 0720-213X

hal-00755289
https://hal.univ-antilles.fr/hal-00755289
DOI : 10.1007/s00435-007-0034-4

Éditeur(s) : Neidine Editeurs
Résumé : This article has for objective to put forward the ethical values of the sea and the ocean. After a reminder(abs of the marine origin of life on earth and what the human always carries in him tracks of this origin, we underline several characteristics: the regulation of the climate by the ocean, the specificities of part of the animal kingdom which unlike other did not conquer the terrestrial domain, the fact that marine biological material was at the origin of numerous Nobel prizes, finally which the sea holds number of biological, mineral, energy resources etc. which will be the resources of tomorrow. The following part is dedicated to the human values which the sea inculcates to those who frequent her. We offer a list of some current expressions of the French language the origin of which is marine or maritime. We discuss then about prosperous nations, sometimes small ones, which knew how to put forward the values of the sea and benefit from it for their influence. We talk about the symbols pulled by the sea, in particular the shells and their value, which various civilizations and peoples have known to adopt. We end on the New Caledonian case and on the opportunities and the assets which can be, considering its marine and maritime values as an island Pacific country.
Cet article a pour objectif de mettre en avant les valeurs éthiques de la mer et de l’océan. Après un rappel de l’origine marine de la vie sur terre et du fait que l’homme porte toujours en lui des traces de cette origine, on souligne plusieurs caractéristiques : la régulation du climat par l’océan, les spécificités de certains embranchements du règne animal qui à la différence d’autres n’ont pas conquis le domaine terrestre, le fait que matériel biologique marin a été à l’origine de nombreux prix Nobel, enfin que la mer recèle nombre de ressources biologiques, minérales, énergétiques etc… qui seront les ressources de demain. La partie suivante est consacrée aux valeurs humaines que la mer inculque à ceux qui la fréquentent. On offre une liste d’expressions courantes de la langue française dont l’origine est marine ou maritime. On discute ensuite des nations florissantes, parfois petites, qui ont su mettre en avant les valeurs de la mer et en tirer profit pour leur rayonnement. On disserte sur les symboles tirés de la mer et notamment des coquillages et de leur valeur que différentes civilisations et peuples ont su adopter. On conclue sur le cas calédonien et sur les opportunités et atouts qui peuvent être les siens de considérer ses valeurs marines et maritimes en tant que pays insulaire du Pacifique.
Tai Kona (2269-7535) (Neidine Editeurs), 2014-07 , N. 9 , P. 28-43

Droits : Tai Kona
http://archimer.ifremer.fr/doc/00203/31393/29782.pdf
http://archimer.ifremer.fr/doc/00203/31393/

Éditeur(s) : HAL CCSD Elsevier Masson
Résumé : Normal faulting mechanisms observed in the northern foothills of the Central–Western Pyrenees are remarkable, since one expects thrust faults at a convergent plate boundary. To understand the mechanisms involved, we used numerical modeling and investigated the impact of the following processes: gravitational potential energy associated with topography and dense crustal blocks; isostatic compensation in response to denudation and/or sedimentation. To decipher the effects of each process, we designed three model geometries and added a pre-existing weak fault where most of the seismicity occurs. To evaluate our model results, we derived the fault slip rate from the focal mechanisms in the region where we have the fault in our model. We found a slip rate of ∼15 m/Ma, which is in agreement with our modelling results. We conclude that flexural rebound induced by surface processes is able to explain the seismicity in Central–Western Pyrenees.
ISSN: 1631-0713

hal-01346028
https://hal.archives-ouvertes.fr/hal-01346028
https://hal.archives-ouvertes.fr/hal-01346028/document
https://hal.archives-ouvertes.fr/hal-01346028/file/Genti.pdf
DOI : 10.1016/j.crte.2015.08.004

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
With only a narrow opening through the Gibraltar and Suez Canals, the Mediterranean Sea is one of thelargest semi-enclosed seas. The marine flora and fauna are some of the richest in the world, relative to itssize, particularly in the coastal habitats, which are also characterized by numerous endemic speciesalthough the introduction of non-indigenous species threatens its rich and unique biodiversity. Followingthe opening of the Suez Canal, and in combination with shipping and aquaculture activities, nonindigenousspecies (NIS) introduction has had measurable impacts on the Mediterranean. Lagoon ecosystemsalong the French coastline, with approx. 100 NIS identified, are considered hot-spot areas forthese species. Rapid assessment sampling for sessile benthic species together with DNA barcoding is arapid, easy and cheap method to detect non-indigenous species. Two nearby and different ecosystemswere sampled for invertebrate species: Saint-Nazaire lagoon, a Special Protection Area within the Natura2000 Network and Canet port, a marina in a small village. The DNA barcoding tool for species identificationwas used for confirming the taxonomy. This showed that, despite the Saint-Nazaire Lagoonclassification within the Natura 2000 network, it is already contaminated with a single NIS that wasfound in high densities and is clearly beginning to dominate the system. It is proposed that a rapidassessment of the sampled environment and the DNA barcode approach are efficient and can providesufficient information on the new target species to be used in conservation planning and ongoingmanagement efforts.
ISSN: 0272-7714

hal-01488926
https://hal-univ-perp.archives-ouvertes.fr/hal-01488926
DOI : 10.1016/j.ecss.2017.02.004

Éditeur(s) : Springer
Résumé : Series of sensitivity tests were performed with a z-coordinate, global eddy-permitting (1/4 degrees) ocean/sea-ice model (the ORCA-R025 model configuration developed for the DRAKKAR project) to carefully evaluate the impact of recent state-of-the-art numerical schemes on model solutions. The combination of an energy-enstrophy conserving (EEN) scheme for momentum advection with a partial step (PS) representation of the bottom topography yields significant improvements in the mean circulation. Well known biases in the representation of western boundary currents, such as in the Atlantic the detachment of the Gulf Stream, the path of the North Atlantic Current, the location of the Confluence, and the strength of the Zapiola Eddy in the south Atlantic, are partly corrected. Similar improvements are found in the Pacific, Indian, and Southern Oceans, and characteristics of the mean flow are generally much closer to observations. Comparisons with other state-of-the-art models show that the ORCA-R025 configuration generally performs better at similar resolution. In addition, the model solution is often comparable to solutions obtained at 1/6 or 1/10 degrees resolution in some aspects concerning mean flow patterns and distribution of eddy kinetic energy. Although the reasons for these improvements are not analyzed in detail in this paper, evidence is shown that the combination of EEN with PS reduces numerical noise near the bottom, which is likely to affect current-topography interactions in a systematic way. We conclude that significant corrections of the mean biases presently seen in general circulation model solutions at eddy-permitting resolution can still be expected from the development of numerical methods, which represent an alternative to increasing resolution.
Ocean Dynamics (1616-7341) (Springer), 2006-12 , Vol. 56 , N. 5-6 , P. 543-567

Droits : © Springer 2006. Part of Springer Science+Business Media
http://archimer.ifremer.fr/doc/2006/publication-3514.pdf
DOI:10.1007/s10236-006-0082-1
http://archimer.ifremer.fr/doc/00000/3514/

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
In southeastern Taiwan a slice of forearc basement belonging to the Philippine Sea Plate upper-plate is suspected to subduct under the Luzon arc as a consequence of the transition from oceanic to incipient continental subduction. Effects on the morphology, deformation, geometry of structures and tectonic evolution of the orogenic wedge in the collision area are numerous. This study examines the impact of foreare lithosphere subduction on forearc basin and accretionary wedge deformation. A morpho-structural analysis of the geological features observed onland and offshore allows describing in detail the complex deformation suffered by the area. A combined approach by analogue modeling is applied to better understand the phenomenon. Comparison between nature and experimental results shows that subduction of a forearc basement slice induces intense shortening and concomitant deformation in the foreare domain. Such process involves deformation of the foreare basin previously developed in a setting of oceanic subduction. Sediments of the forearc basin are involved in the growth of a new thrust ridge backthrusted against the basement slope of the volcanic arc edifice. Sediments coming from the growing orogenic wedge are trapped in the trough developed between its backpart and the topographic high of the new rising ridge. A syn-collisional orogenic basin develops which structural evolution characterizes the progressive shortening of the forearc domain. Most of the deformation and tectonic events recorded offshore or onland in the complex area south of Taiwan can be explained using results of our specific modeling which well describe the tectonic processes associated with continental subduction under a volcanic are.
ISSN: 0040-1951

hal-00420080
https://hal.archives-ouvertes.fr/hal-00420080
DOI : 10.1016/j.tecto.2007.11.016

Éditeur(s) : HAL CCSD Public Library of Science
Résumé : International audience
The scleractinian coral Pocillopora damicornis type β is known to present a mixed reproduction mode: through sexual reproduction, new genotypes are created, while asexual reproduction insures their propagation. In order to investigate the relative proportion of each reproduction mode in P. damicornis type β populations from Reunion Island, Indian Ocean, clonal propagation along the west coast was assessed through four sampling sites with increasing geographical distance between sites. Coral colonies were sampled either exhaustively, randomly or haphazardly within each site, and genotypic diversity was assessed using 13 microsatellite loci over a total of 510 P. damicornis type β determined a posteriori from their mtDNA haplotype (a 840 bp sequenced fragment of the Open Reading Frame). Overall, 47% of all the sampled colonies presented the same multi-locus genotype (MLG), a superclone, suggesting that asexual propagation is extremely important in Reunion Island. Within each site, numerous MLGs were shared by several colonies, suggesting local clonal propagation through fragmentation. Moreover, some of these MLGs were found to be shared among several sites located 40 km apart. While asexual reproduction by fragmentation seems unlikely over long distances, our results suggest a production of parthenogenetic larvae. Despite shared MLGs, two differentiated clusters were enclosed among populations of the west coast of Reunion Island, revealing the necessity to set up appropriate managing strategies at a local scale.
ISSN: 1932-6203

hal-01450078
http://hal.univ-reunion.fr/hal-01450078
DOI : 10.1371/journal.pone.0169692

Éditeur(s) : American Geophysical Union
Résumé : [1] Extreme weather events such as tropical cyclones are difficult to observe with conventional means. Satellite-based observations provide essential measurements of key parameters governing tropical cyclones. They are critical for short-term forecasting. Radiometers onboard the Defense Meteorological Satellite Program satellite series, WindSat and Tropical Rainfall Measuring Mission satellites, scatterometers onboard the ERS, ADEOS, and QuikScat satellites offer unprecedented synoptic observations of surface wind and atmospheric liquid water content, revealing the storm structures with good accuracy. However, satellite estimates do not provide direct measurements of geophysical parameters and can suffer from limitations linked to the sensors characteristics, such as the signal wavelength and polarization or the measurement incidence angle. For example, measurements at Ku band are strongly affected by rain. Still, each observing system can offer specific information that can be combined with the others. In particular, we highlight the capabilities of dual-frequency altimeter to provide very high resolution measurements of rain rate, surface wind speed, and wave characteristics. A method is proposed to obtain continuous along-track 5 km resolution measurements of these parameters in the tropical cyclone Isabel. The results shows that dual-frequency altimeters can provide useful information to complement and validate the operational fields provided by the atmospheric numerical models and by NOAA observing systems.
Journal of Geophysical Union - Research C - Oceans (0148-0227) (American Geophysical Union), 2006 , Vol. 111 , N. C1 , P. NIL_38-NIL_50

Droits : 2006 American Geophysical Union
http://archimer.ifremer.fr/doc/2006/publication-1033.pdf
DOI:10.1029/2005JC003068
http://archimer.ifremer.fr/doc/00000/1033/

Éditeur(s) : HAL CCSD Inter Research
Résumé : International audience
The main objective of the VULSACO (VULnerability of SAndy COasts to climate change and anthropic pressure) project was to investigate present day and potential future vulnerability of sandy coasts at the 2030 horizon, i.e. on a time scale related to climate variability. The method, based on a multidisciplinary approach bringing together geologists, geographers, physicists, social psychologists, engineers and stakeholders, was structured around 4 axes: field data analysis; numerical modelling; analysis of governance and stakeholder perceptions; and development of vulnerability indexes. This approach was designed to investigate vulnerability at a local scale and was applied to 4 contrasting beaches located in France: Sète Lido (Mediterranean Sea), Truc Vert and La Tresson beaches (Atlantic Ocean), and Dewulf (English Channel). The results focus on decadal and multi-annual beach trends at the Truc Vert beach site. There is almost no trend in beach volume at Truc Vert beach, although there is a variation in this parameter on a cycle of 2 to 3 yr, with variations related to wave energy and probably to indexes of climate variability. Numerical modelling identified the sensitivity of beach responses to changes in wave height and direction, especially in terms of subtidal morphology and the potential development of shoreline instability. Together with the observed offshore wave angle at the Biscay Buoy, these model results suggest that a potential change in wave angle due to climate variability could significantly modify the bars' morphology. The combination of data analysis and numerical modelling contributed to the development of vulnerability indexes designed for sandy coasts, which take into account climate-dependant variables such as waves. This allowed the differentiation of the sites in terms of vulnerability to erosion: Sète Lido and Truc Vert beach were the most and least vulnerable sites, respectively. These indexes help in identifying the dominant components of beach vulnerability, and provide potential for the study of how anthropogenic factors affect vulnerability. The study of stakeholder perceptions and decision-making with regard to climate-related risk also highlighted potential anthropogenic effects on beach vulnerability, and identified possible site-specific outcomes.
ISSN: 0936-577X

hal-00843946
https://hal-brgm.archives-ouvertes.fr/hal-00843946
DOI : 10.3354/cr01153

Éditeur(s) : Université des Antilles Études caribéennes
Résumé : Le patrimoine et le tourisme sont des facteurs avérés de développement. De leur bonne exploitation peut contribuer à l’amélioration des conditions d’existence des populations locales. L’Est-Cameroun est le fief de ressources naturelles et culturelles d’une étonnante diversité pouvant impulser une forte activité touristique. Cependant, même si cette région reçoit chaque année des touristes nationaux et étrangers, elle ne peut pas se targuer de faire profiter sa population des effets directs, indirects et induits qu’engendrerait une activité touristique convenablement menée. Le présent article expose, dans une perspective historique (1980-2010), les raisons pour lesquelles, le tourisme et le développement de l’Est-Cameroun piétinent en dépit de ses nombreuses ressources patrimoniales.La collecte des données (écrites, orales, iconographiques, électroniques) sur le terrain de recherche associée à l’observation permet de constater que le tourisme fut très vite relégué au second plan. L’exploitation minière et forestière intensive, au lieu de faciliter l’émergence de la région, a plutôt hypothéquée son avenir. Le rôle des agences chargées de la gestion du tourisme à l’Est-Cameroun s’est limité à l’inventaire des sites touristiques, l’aménagement sporadique de quelques-uns et la mise en œuvre d’actions promotionnelles approximatives. La négligence du tourisme par les autorités camerounaises n’est pas une nouveauté ; elle a pour corollaire l’apparition de difficultés diverses (braconnage, manque de personnel, insécurité…).
Heritage and tourism are recognized factors of development. Their good exploitation can contribute to the improvement of the conditions of existence of local populations. East-Cameroon is the fief of natural and cultural resources which can stimulate tourism. Although even if this region receives every year domestic and foreign tourists, its population cannot profit from direct, indirect and induced effects which would engender a suitably led tourist activity. The present article exposes, in a historical perspective (1980-2010), reasons why, tourism and development of East-Cameroon tramples in spite of its numerous heritage resources. The data collection (written, oral, iconographic, electronic…) on the research filed and personal observation allow to notice that tourism was very fast relegated in East-Cameroon. The intensive mining and forest exploitation have hypothecated the future of this area instead of developing it. Moreover, the role of tourism agencies in eastern Cameroon is limited itself to inventory of places of interest, sporadic development and approximate promotional actions. The negligence of tourism by the Cameroon authorities is not novelty; it has for corollary appearance of difficulties (as poaching, lack of personal, insecurity).
Cameroun

Droits : info:eu-repo/semantics/openAccess
urn:doi:10.4000/etudescaribeennes.9453
http://journals.openedition.org/etudescaribeennes/9453

Éditeur(s) : HAL CCSD MDPI
Résumé : International audience
Marine ecosystems cover about 70% of the planet surface and are still an underexploited source of useful metabolites. Among microbes, filamentous fungi are captivating organisms used for the production of many chemical classes of secondary metabolites bound to be used in various fields of industrial application. The present study was focused on the collection, isolation, screening and genotyping of pigmented filamentous fungi isolated from tropical marine environments around La Réunion Island, Indian Ocean. About 150 micromycetes were revived and isolated from 14 marine samples (sediments, living corals, coral rubble, sea water and hard substrates) collected in four different locations. Forty-two colored fungal isolates belonging to 16 families, 25 genera and 31 species were further studied depending on their ability to produce pigments and thus subjected to molecular identification. From gene sequence analysis, the most frequently identified colored fungi belong to the widespread Penicillium, Talaromyces and Aspergillus genera in the family Trichocomaceae (11 species), then followed by the family Hypocreaceae (three species). This study demonstrates that marine biotopes in La Réunion Island, Indian Ocean, from coral reefs to underwater slopes of this volcanic island, shelter numerous species of micromycetes, from common or uncommon genera. This unstudied biodiversity comes along with the ability for some fungal marine inhabitants, to produce a range of pigments and hues.
ISSN: 2309-608X

hal-01657071
http://hal.univ-reunion.fr/hal-01657071
http://hal.univ-reunion.fr/hal-01657071/document
http://hal.univ-reunion.fr/hal-01657071/file/14-%20Fouillaud%20et%20al.%2C%20J.%20of%20Fungi%202017.pdf
DOI : 10.3390/jof3030036

Éditeur(s) : HAL CCSD Wiley
Résumé : International audience
The way faults control upward fluid flow in nonmagmatic hydrothermal systems in extensional context is still unclear. In the Eastern Pyrénées, an alignment of twenty-nine hot springs (29 ∘ C to 73 ∘ C), along the normal Têt fault, offers the opportunity to study this process. Using an integrated multiscale geological approach including mapping, remote sensing, and macro-and microscopic analyses of fault zones, we show that emergence is always located in crystalline rocks at gneiss-metasediments contacts, mostly in the Têt fault footwall. The hot springs distribution is related to high topographic reliefs, which are associated with fault throw and segmentation. In more detail, emergence localizes either (1) in brittle fault damage zones at the intersection between the Têt fault and subsidiary faults or (2) in ductile faults where dissolution cavities are observed along foliations, allowing juxtaposition of metasediments. Using these observations and 2D simple numerical simulation, we propose a hydrogeological model of upward hydrothermal flow. Meteoric fluids, infiltrated at high elevation in the fault footwall relief, get warmer at depth because of the geothermal gradient. Topography-related hydraulic gradient and buoyancy forces cause hot fluid rise along permeability anisotropies associated with lithological juxtapositions, fracture, and fault zone compositions.
ISSN: 1468-8115

hal-01582968
https://hal-brgm.archives-ouvertes.fr/hal-01582968
https://hal-brgm.archives-ouvertes.fr/hal-01582968/document
https://hal-brgm.archives-ouvertes.fr/hal-01582968/file/Taillefer_et_al_Geofluids_2017.pdf
DOI : 10.1155/2017/8190109

Éditeur(s) : HAL CCSD
Résumé : Among erosion processes, river incision is classicaly described as a key process controlling erosion of landscapes. Incision efficiency is mainly influenced by climate and erodibility. This latter is not only dependent on the nature of the bedrock, but also on its past deformation, which affects its rheological effective properties, such as fracture density. The main objectives of this thesis are: (1) to better constrain the relationship between effective properties and erodibility, and (2) to quantify the influence of erodibility and erosion on both the temporal and spatial building or decay of the topography. Several numerical tools are developed. A 1D formalism of landscape evolution is introduced, including river incision with stochastic distribution of water discharge and hillslope landsliding. A new remeshing algorithm called Surface Lagrangian Remeshing (SLR) is developed as a complement to remeshing algorithms dealing with internal elements. It allows one to take into account long-term erosion into 2D Lagrangian numerical codes based on triangular finite elements. Then the potentiality of measuring erodibility in-situ using a Schmidt hammer (R) is assessed for the active orogen of Taiwan, the diagenetic Annot sandstones and St Clement fault zone. Results suggest a strong control of R by effective properties. A linear model based on effective medium theory is applied to a fault zone with an unmacthed resolution (750 measures, 25 measures per square meter). The model successfully correlates R to fracture density. These results demonstrate that effective elasticity as well as erodibility are sensitive to the density and type of fractures. Finally I focus on the erosional and rheological conditions that allows reproducing post-orogenic evolution of mountain belts. A model coupling surface erosion and regional isostatic uplift is consistent with observations. The topographic decay and decrease of the ratio of surface elevation over crustal root thickness is at first order controlled by the initial geometry of the mountain belt and erosion efficiency. This new model highlights the control ofclimate and erodibility on the topographic decay and of lithospheric rheology on the perseverance of crustal roots.
Parmi les processus d'érosion, l'incision des rivières est classiquement décrit comme un processus clé contrôlant l'érosion des paysages. L'efficacité de l'incision est principalement influencée par le climat et par l'érodabilité. Ce dernier paramètre ne dépend pas seulement de la nature du substratum rocheux, mais aussi de sa déformation passée qui affecte ses propriétés rhéologiques équivalentes. Les principaux objectifs de cette thèse sont: (1) de mieux contraindre les relations entre propriétés équivalentes et érodabilité, et (2) de quantifier l'influence de l'érosion et de l'érodabilité sur la formation ou la décadence, spatiale et temporelle, de la topographie. Plusieurs outils numériques sont développés. Un formalisme 1D d'évolution des paysages est proposé, prenant en compte simultanément l'incision des rivières avec une distribution stochastique des débits en eau et l'érosion des versants par glissements de terrain. Un nouvel algorithme de remaillage appelé Surface Lagrangian Remeshing (SLR) est développé. Il permet de prendre en compte l'érosion à long terme dans les codes numériques 2D Lagrangiens basés sur des éléments finis triangulaires. Ensuite, la possibilité de mesurer in-situ l'érodabilité avec un marteau de Schmidt (R) est évaluée pour: l'orogène actif de Taiwan, les grès diagénétiques d'Annot et la zone de faille de St Clément. Les résultats suggèrent un fort contrôle de R par les propriétés équivalentes des roches testées. Un modèle linéaire, basé sur la théorie des milieux équivalents, est appliqué à une zone de faille avec une résolution inégalée (750 mesures, 25 mesures par mètre carré). Le modèle permet de corréler avec succès la densité de fracture et R. Ces résultats démontrent empiriquement que l'élasticité équivalente ainsi que l'érodabilité sont sensibles à la densité et à la nature des fractures. Enfin j'étudie les conditions d'érosion et de rhéologie qui permettent de reproduire l'évolution des chaînes de montagnes post-orogéniques. Un modèle couplant érosion en surface et soulèvement isostatique régional est compatible avec les observations. Les taux de décroissance topographique et de diminution du rapport de l'élévation de surface sur l'épaisseur de racine crustale sont contrôlés au premier ordre par la géométrie initiale de la chaîne de montagne et par l'efficacité de l'érosion. Ce nouveau modèle met en évidence le contrôle du climat et de l'érodabilité sur la décroissance topographique et de la rhéologie lithosphérique sur la persévérance des racines crustales.
https://tel.archives-ouvertes.fr/tel-00602341

tel-00602341
https://tel.archives-ouvertes.fr/tel-00602341
https://tel.archives-ouvertes.fr/tel-00602341/document
https://tel.archives-ouvertes.fr/tel-00602341/file/thesephilippesteer.pdf

Éditeur(s) : HAL CCSD IEEE
Résumé : International audience
Recent works display that large scale image classification problems rule out computationally demanding methods. On such problems, simple approaches like k-NN are affordable contenders, with still room space for statistical improvements under the algorithmic constraints. A recent work showed how to leverage k-NN to yield a formal boosting algorithm. This method, however, has numerical issues that make it not suited for large scale problems. We propose here an Adaptive Newton-Raphson scheme to leverage k-NN, N³, which does not suffer these issues. We show that it is a boosting algorithm, with several key algorithmic and statistical properties. In particular, it may be sufficient to boost a subsample to reach desired bounds for the loss at hand in the boosting framework. Experiments are provided on the SUN, and Caltech databases. They confirm that boosting a subsample -- sometimes containing few examples only -- is sufficient to reach the convergence regime of N³. Under such conditions, N³ challenges the accuracy of contenders with lower computational cost and lower memory requirement.
IEEE International Workshop on Machine Learning for Signal Processing
Southampton, United Kingdom

hal-00959125
https://hal.archives-ouvertes.fr/hal-00959125
https://hal.archives-ouvertes.fr/hal-00959125/document
https://hal.archives-ouvertes.fr/hal-00959125/file/BNNB_mlsp2013.pdf

Éditeur(s) : Neidine Editeurs
Résumé : The object of this article is to offer a synthesis of the knowledge clarifying the originality and the diversity of the submarine geological formations of the New Caledonian EEZ. A reminder is given onto the geologic history of the region, based upon the dislocation of the Gondwana Continent, the opening of the Tasman Sea, the presence of submarine volcanism, the setting up of heavy peridotitic rocks, the building up of the Fairway and Lord Howe Ridges and of sedimentary basins, the formation of volcanic domes and sea-mounts or guyots, the subduction along the Vanuatu Trench, the uplift of the Loyalty Islands, the development of carbonated ptatforms around the islands etc.... Of this complex history ensues an exceptional submarine geo-diversity. After this presentation the article clarifies the methods and the tools used in marine geosciences to map, explore, observe, analyze, sample, that they are embarked or are autonomous, teleoperated or inhabited systems. A chapter describes the programs which were set up since about forty years and the results obtained as well as the scientific teams concerned with. In conclusion, based on the unpublished character of this geo-diversity, the article introduces the second text to come in a next issue of theTai Kona magazine, text which will focus on the scientific, economic (mineral resources), environmental (deep biodiversity) and risks (seismicity) challenges that are worn by one of the most original submarine geologic context in the world.
L’objet de cet article est de proposer une synthèse des connaissances explicitant l’originalité et la diversité des formations géologiques sous-marines de la ZEE calédonienne. Un rappel est donné sur l’histoire géologique de la région basée sur la dislocation du continent Gondwana, l’ouverture de la Mer de Tasman, la présence de volcanisme sous-marin, la mise en place des péridotites, la formation des rides de Fairway et Lord Howe et de bassins sédimentaires, la formation de dômes et monts sous-marins ou guyots, la subduction le long de la fosse de Vanuatu, la surrection des Loyautés, la mise en place de plateformes carbonatées etc... De cette histoire complexe découle une géo-diversité sous-marine exceptionnelle. Après cette présentation l’article explicite les méthodes et les outils utilisés en géosciences marines pour cartographier, explorer, observer, analyser, prélever, qu’ils soient embarqués ou soient des systèmes autonomes, télé-opérés ou habités. Un chapitre décrit les programmes qui ont été mis en place depuis une quarantaine d’années et les résultats obtenus ainsi que les équipes scientifiques en place. En conclusion sur le constat du caractère inédit de cette géo-diversité, l’article introduit un deuxième texte à venir dans un prochain numéro de Tai Kona, texte qui se focalisera sur les enjeux scientifiques, économiques (ressources minérales), environnementaux (biodiversité profonde) et de risques (sismicité) portés par un contexte géologique sous-marin des plus originaux.
Tai Kona (2269-7535) (Neidine Editeurs), 2014 , N. 8 , P. 48-57

Droits : 2014 Tai Kona
http://archimer.ifremer.fr/doc/00194/30574/29098.pdf
http://archimer.ifremer.fr/doc/00194/30574/

Éditeur(s) : HAL CCSD Ecological Society of America
Résumé : Herbivory is viewed as a major driver of plant evolution and the mostimportant energy pathway from plants to higher trophic levels. Therefore, understandingpatterns of herbivory on plants remains a key focus in evolution and ecology. Theevolutionary impacts of leaf herbivory include altering plant fitness, local adaptation, theevolution of defenses, and the diversification of plants as well as natural enemies. Leafherbivory also impacts ecological processes such as plant productivity, communitycomposition, and ecosystem nutrient cycling. Understanding the impact of herbivory onthese ecological and evolutionary processes requires species-specific, as opposed tocommunity-level, measures of herbivory. In addition, species-specific data enables the use ofmodern comparative methods to account for phylogenetic non-independence. Althoughhundreds of studies have measured natural rates of leaf consumption, we are unaware of anyaccessible compilation of these data. We created such a data set to provide the raw dataneeded to test general hypotheses relating to plant–herbivore interactions and to test theinfluence of biotic and abiotic factors on herbivory rates across large spatial scales. A largerepository will make this endeavor more efficient and robust. In total, we compiled 2641population-level measures for either annual or daily rates of leaf herbivory across 1145 speciesof vascular plants collected from 189 studies. All damage measures represent naturaloccurrences of herbivory that span numerous angiosperm, gymnosperm, and fern species. Toenable researchers to explore the causes of variation in herbivory and how these mightinteract, we added information about the study sites including: geolocation, climateclassification, habitat descriptions (e.g., seashore, grassland, forest, agricultural fields), andplant trait information concerning growth form and duration (e.g., annual vs. perennial). Wealso included extensive details of the methodology used to measure leaf damage, includingseasons and months of sampling, age of leaves, and the method used to estimate percentagearea missing. We anticipate that these data will make it possible to test important hypothesesin the plant–herbivore literature, including the plant apparency hypothesis, the latitudinalherbivorydefense hypothesis, the resource availability hypothesis, and the macroevolutionaryescalation of defense hypothesis.
ISSN: 0012-9658

hal-01601627
https://hal.archives-ouvertes.fr/hal-01601627
DOI : 10.1890/13-1741.1
PRODINRA : 397136
PUBMED : 24870043

Éditeur(s) : HAL CCSD American Geophysical Union
Résumé : International audience
Knowing the slip amplitudes that large earthquakes produced in prehistorical times is one key to anticipate the magnitude of large forthcoming events. It is long known that the morphology is preserving remnants of paleoearthquake slips in the form of fault-offset landforms. However, the measured offsets that can be attributed to the most recent paleoearthquakes are generally few along a fault, so that they rarely allow recovering the slip distributions and largest slips of these earthquakes. We acquired ~1 m resolution airborne lidar data on a 30 km stretch of a fast-slipping strike-slip fault (eastern Hope Fault, New Zealand) located in a region of high alluvial dynamics where landforms are rapidly evolving. Data analysis reveals >200 offset landforms; only 30% allow a good to moderate quality offset measurement. From these good to moderate quality measures, we recover the slip-length distributions and largest slips of the four most recent large paleoearthquakes and find evidence of 4–6 prior events. The record suggests that large earthquake slip recurred in multiples of about 4 m along the 30 km stretch. Although they have larger uncertainties, the more numerous lower-quality offsets that we also measured reveal a similar earthquake slip record. This shows that, although offset landforms are partly degraded in dynamically active landscapes, they store valuable information on paleoearthquake slips. This information might be recovered provided that the morphology is analyzed at high resolution and " continuously " over a significant fault length. Remote lidar data are powerful to perform such analyses.
ISSN: 2169-9313

insu-01469219
https://hal-insu.archives-ouvertes.fr/insu-01469219
https://hal-insu.archives-ouvertes.fr/insu-01469219/document
https://hal-insu.archives-ouvertes.fr/insu-01469219/file/Manighetti_et_al-2015-Journalsur Geophysical_Research__Solid_Earth.pdf
DOI : 10.1002/2014JB011787

Éditeur(s) : HAL CCSD American Geophysical Union (AGU)
Résumé : International audience
The Ronda peridotite supplies one of the best objects to document subcontinental mantle deformation, but its internal deformation and exhumation mechanisms remain controversial. Here we provide new structural data and numerical results that constrain the Oligocene-Miocene deformation history of the Ronda massif. We first describe a mantle shear zone in the northern massif that developed subcrustal strain localization during decompression and related partial melting. The deformation regime of this mantle shear zone evolved from penetrative NE-SW stretching to sinistral shear highlighted by discrete shear bands. We then show structural observations that document a viscous deformation in the southern massif occurring prior to the thrust-assisted emplacement of the peridotite during large decompression. Finally, we performed numerical investigations that quantify a high temperature of 980°C for the basal peridotite lens at the time of its crustal emplacement. Our numerical results constrain the timing of ductile deformation of the peridotite just before 22 Ma, probably between 30 and 22 Ma. Altogether, these features led us to conclude that the deformation and exhumation of the Ronda peridotite results from lithosphere thinning subsequently inverted in the course of the Oligocene-Miocene. Among available models, our findings support the hypothesis of peridotite exhumation by the inversion of a thinned back-arc continental lithosphere during westward slab rollback through the Alboran region.
ISSN: 0278-7407

insu-00924180
https://hal-insu.archives-ouvertes.fr/insu-00924180
https://hal-insu.archives-ouvertes.fr/insu-00924180/document
https://hal-insu.archives-ouvertes.fr/insu-00924180/file/tect20062.pdf
DOI : 10.1002/tect.20062