Éditeur(s) : HAL CCSD
Résumé : International audience
Here, we synthesize conceptual frameworks, applied modeling approaches, and as case studies to highlight complex social-ecological system (SES) dynamics that inform environmental policy, conservation and management. Although a set of “good practices” about what constitutes a good SES study are emerging, there is still a disconnection between generating SES scientific studies and providing decision-relevant information to policy makers. Classical single variable/hypothesis studies rooted in one or two disciplines are still most common, leading to incremental growth in knowledge about the natural or social system, but rarely both. The recognition of human dimensions is a key aspect of successful planning and implementation in natural resource management, ecosystem-based management, fisheries management, and marine conservation. The lack of social data relating to human-nature interactions in this particular context is now seen as an omission, which can often erode the efficacy of any resource management or conservation action. There have been repeated calls for a transdisciplinary approach to complex SESs that incorporates resilience, complexity science characterized by intricate feedback interactions, emergent processes, non-linear dynamics and uncertainty. To achieve this vision, we need to embrace diverse research methodologies that incorporate ecology, sociology, anthropology, political science, economics and other disciplines that are anchored in empirical data. We conclude that to make SES research most useful in adding practical value to conservation planning, marine resource management planning processes and implementation, and the integration of resilience thinking into adaptation strategies, more research is needed on (1) understanding social-ecological landscapes and seascapes and patterns that would ensure planning process legitimacy, (2) costs of transformation (financial, social, environmental) to a stable resilient social-ecological system, (3) overcoming place-based data collection challenges as well as modeling challenges.
Ocean and Coastal Management

Droits : http://creativecommons.org/licenses/by-nc-nd/
hal-01224152
https://hal-univ-perp.archives-ouvertes.fr/hal-01224152
https://hal-univ-perp.archives-ouvertes.fr/hal-01224152/document
https://hal-univ-perp.archives-ouvertes.fr/hal-01224152/file/1-s2.0-S096456911500126X-main.pdf
DOI : 10.1016/j.ocecoaman.2015.04.018

Éditeur(s) : HAL CCSD
Résumé : International audience
Clear cell renal cell carcinoma (ccRCC) has a poor prognosis with a 50% risk of metastases. Little is known about the phenotypic and molecular profiles of metastases regarding their corresponding primary tumors. This study aimed to screen phenotypic and genotypic differences between metastases and their corresponding primary tumors. We selected four cases with available frozen material. The histological, immunohistochemical (VEGFA, CD31, SMA, Ki67, p53, PAR-3), FISH (VHL gene), next-generation sequencing (VHL and c-MET genes), multiplex ligation-dependent probe amplification, and array-(comparative genomic hybridization) CGH analyses were realized. Metastases were nodal, hepatic (synchronous), adrenal, and pulmonary (metachronous). High-grade tumor cells were significantly more frequent in metastases (p = 0.019). Metastases and high-grade zones of primary tumors shared similar characteristics compared to low-grade zones: a lower microscopic vascular density (43.5 vs 382.5 vessels/mm(2); p = 0.0027), a higher expression of VEGF (73 vs 10%, p = 0.045), Ki67 (37.6 vs 8.3%; p = 0.011), and p53 (54 vs 10.6%; p = 0.081), and a cytoplasmic and membranous PAR-3 staining. Metastases exhibited more chromosomal imbalances than primary tumors in total (18.75 ± 6.8; p = 0.044) with more genomic gains (13.5 ± 7; p = 0.013). The loss of chromosome 9 and gain of Xq were found in both primary tumors and metastases but gains of loci or chromosomes 2p, 3q, 5, 8q, 12, and 20 were only found in metastases. The VHL gene status was similar in each tumor couple. Although metastases and primary tumors share common histological features, this study highlights chromosomal differences specific to metastases which could be involved in ccRCC metastatic evolution.
Virchows Archiv

hal-01560281
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01560281
DOI : 10.1007/s00428-017-2124-0
PUBMED : 28488172

Éditeur(s) : HAL CCSD
Résumé : International audience
The environmental uncertainty leads SMEs to adopt collective strategies in order to supplement their inadequate resources. The longitudinal study of the Pic Saint-Loup union of wine producers provides an understanding of how SMEs can develop collective strategies. The case study is based on several time of data collection from mainly forty five semi-structured interviews. Our findings are twofold. We identify the stages of SMEs collective strategies development and the role of stakeholders. Then, we highlight the tertius strategies of SMEs owner-managers and the positive influence of their combination.
Les PME, plus vulnérables aux forces de l'environnement, cherchent à compléter l'insuffisance de leurs ressources en adoptant des stratégies collectives afin de réduire cette incertitude. L'étude longitudinale du syndicat de producteurs de vin du Pic Saint-Loup, qui s'appuie sur plusieurs temps de collecte et quarante-cinq entretiens semi-directifs, permet de comprendre la façon dont des PME peuvent développer des stratégies collectives. Nous identifions les phases du développement de la stratégie collective ainsi que le rôle joué par les parties prenantes. Puis, nous soulignons les stratégies de tertius des dirigeants de PME et leur combinaison favorisant le développement de ces stratégies collectives. Mots clés : Stratégie collective, PME, étude longitudinale, parties prenantes, tertius. *Remerciements Ce papier bénéficie du soutien de la chaire Entrepreneuriat et Innovation du 'Labex Entreprendre' de Montpellier en France. Ce " laboratoire d'excellence " est reconnu et soutenu par le gouvernement français pour la qualité de ses recherches dans les sciences humaines et sociales.
Management International / International Management / Gestión Internacional

hal-01588177
http://hal.univ-smb.fr/hal-01588177
http://hal.univ-smb.fr/hal-01588177/document
http://hal.univ-smb.fr/hal-01588177/file/MI-710%20-%20GRANATA%20DA%20FONSECA%20MARQU%C3%88S%20G%C3%89RAUDEL.pdf

Éditeur(s) : HAL CCSD Institute of Electrical and Electronics Engineers
Résumé : International audience
The state-space modeling of partially observed dynamical systems generally requires estimates of unknown parameters. The dynamic state vector together with the static parameter vector can be considered as an augmented state vector. Classical filtering methods, such as the extended Kalman filter (EKF) and the bootstrap particle filter (PF), fail to estimate the augmented state vector. For these classical filters to handle the augmented state vector, a dynamic noise term should be artificially added to the parameter components or to the deterministic component of the dynamical system. However, this approach degrades the estimation performance of the filters. We propose a variant of the PF based on convolution kernel approximation techniques. This approach is tested on a simulated case study.
ISSN: 0018-9251

inria-00459886
https://hal.inria.fr/inria-00459886
DOI : 10.1109/TAES.2009.5259183

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : International audience
The age of Ultra-high pressure metamorphism and early cooling remains controversial in the Alps. In a new approach to the problem, samples from the undeformed Hercynian metagranite, Brossasco, were studied using an ultra-violet laser ablation microprobe technique for 40Ar-39Ar dating. The results demonstrate the frequent occurence of excess argon with high 40Ar/36Ar ratios (1000-10000) and a strong relationship between apparent ages and metamorphic textures. The highest excess argon ratios are always associated with high closure temperature minerals or large diffusion domains within single mineral phases. The best interpretation of this relationship seems to be that excess argon was incorporated in all phases during the high pressure event, then mixed with an atmospheric component during rapid cooling and retrogression, producing a wide range of argon concentrations and 40Ar/36Ar ratios. In the present case, some ages in the range 60-110 Ma could be explained by the presence of excess argon incorporated around 40-50 Ma ago. Similar results found in other high-pressure terrains in the Alps may reconcile the argon geochronometer with other systems such as Rb/Sr, U/Pb or Sm/Nd. This study therefore calls for an increasing use of high resolution in-situ sampling techniques to clarify the meaning of 40Ar/39Ar ages in many high pressure terrains.
ISSN: 0010-7999

hal-00197563
https://hal.archives-ouvertes.fr/hal-00197563
https://hal.archives-ouvertes.fr/hal-00197563/document
https://hal.archives-ouvertes.fr/hal-00197563/file/Excess_UV_Arnaud_and_Kelley_GCA_Pub_preprint.pdf

Éditeur(s) : HAL CCSD Nature Publishing Group
Résumé : International audience
Treacher Collins/Franceschetti syndrome (TCS; OMIM 154500) is a disorder of craniofacial development belonging to the heterogeneous group of mandibulofacial dysostoses. TCS is classically characterized by bilateral mandibular and malar hypoplasia, downward-slanting palpebral fissures, and microtia. To date, three genes have been identified in TCS:,TCOF1, POLR1D, and POLR1C. We report a clinical and extensive molecular study, including TCOF1, POLR1D, POLR1C, and EFTUD2 genes, in a series of 146 patients with TCS. Phenotype-genotype correlations were investigated for 19 clinical features, between TCOF1 and POLR1D, and the type of mutation or its localization in the TCOF1 gene. We identified 92/146 patients (63%) with a molecular anomaly within TCOF1, 9/146 (6%) within POLR1D, and none within POLR1C. Among the atypical negative patients (with intellectual disability and/or microcephaly), we identified four patients carrying a mutation in EFTUD2 and two patients with 5q32 deletion encompassing TCOF1 and CAMK2A in particular. Congenital cardiac defects occurred more frequently among patients with TCOF1 mutation (7/92, 8%) than reported in the literature. Even though TCOF1 and POLR1D were associated with extreme clinical variability, we found no phenotype-genotype correlation. In cases with a typical phenotype of TCS, 6/146 (4%) remained with an unidentified molecular defect.
ISSN: 1098-3600

hal-01134364
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01134364
DOI : 10.1038/gim.2015.29
PUBMED : 25790162

Éditeur(s) : HAL CCSD Paris : Muséum national d'histoire naturelle
Résumé : International audience
The decline of meso-predators such as reef sharks is a concern as such species can have importantecological roles in maintaining reef ecosystem resilience. Two field trips conducted in August 2010 and November2011 to the Chesterfield archipelago (Coral Sea) allowed us to assess the abundances and average sizes ofmedium-bodied Carcharhinidae with a specific focus on grey reef shark (Carcharhinus amblyrhynchos), throughfishing (46 hours of accumulated effort) and underwater visual censuses (25 hours of accumulated effort). Wefound low abundance and small average total length (TL) for all reef shark species, and in the case of the greyreef shark, an average abundance of 2.1 individuals/dive with the majority of animals less than 110 cm TL. Wecompared our findings with historical data and, given our low sampling effort, we so far hypothesise that a generalstrong decline in the reef shark populations may have occurred in this area, probably due to recent overfishing.The enforcement of conservation measures is strongly recommended among these remote reefs as well ascomplementary studies for confirming this hypothesis.
Le déclin de méso-prédateurs tels que les requins de récif pose problème dans la mesure où ces espèces peuventavoir un rôle important dans le maintien de la résilience des écosystèmes coralliens. Deux missions conduitesen août 2010 et novembre 2011 dans l’archipel des Chesterfield (mer de Corail) nous ont permis d’évaluer lesabondances et longueurs totales (LT) moyennes de Carcharhinidae côtiers, en particulier du requin gris (Carcharhinusamblyrhynchos), à partir de sessions de pêche (46 heures au total) et de comptages sous-marins (25 heuresau total). Nous avons globalement trouvé de très faibles abondances et tailles moyennes avec, spécifiquementpour le requin gris, une abondance moyenne de 2,1 individus/plongée et une majorité d’animaux avec des LTinférieures à 110 cm. Nous avons comparé ces résultats à des données historiques et, étant donné certaines limitesde notre échantillonnage, nous nous cantonnons à poser l’hypothèse d’un déclin généralisé des populationsde requins de récifs dans cette zone, probablement dû à la surpêche. La mise en oeuvre effective de mesures deconservation est fortement recommandée au sein de ces récifs éloignés, de même que des études complémentairespour confirmer cette hypothèse.
ISSN: 0399-0974

hal-01281158
https://hal-univ-perp.archives-ouvertes.fr/hal-01281158

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Because territoriality is energetically costly, territorial animals frequently respond less aggressively toneighbours than to strangers, a reaction known as the "dear enemy phenomenon" (DEP). The contrary,the "nasty neighbour effect" (NNE), occurs mainly for group-living species defending resource-basedterritories. We studied the relationships between supercolonies of the pest fire ant Solenopsis saevissimaand eight ant species able to live in the vicinity of its nests plus Eciton burchellii, an army ant predatorof other ants. The workers from all of the eight ant species behaved submissively when confrontedwith S. saevissima (dominant) individuals, whereas the contrary was never true. Yet, S. saevissima weresubmissive towards E. burchellii workers. Both DEP and NNE were observed for the eight ant species, withsubmissive behaviours less frequent in the case of DEP. To distinguish what is due to chemical cues fromwhat can be attributed to behaviour, we extracted cuticular compounds from all of the nine ant speciescompared and transferred them onto a number of S. saevissima workers that were then confronted withuntreated conspecifics. The cuticular compounds from three species, particularly E. burchellii, triggeredgreater aggressiveness by S. saevissima workers, while those from the other species did not.
ISSN: 0376-6357

hal-00913344
https://hal.archives-ouvertes.fr/hal-00913344
https://hal.archives-ouvertes.fr/hal-00913344/document
https://hal.archives-ouvertes.fr/hal-00913344/file/roux_10206.pdf
DOI : 10.1016/j.beproc.2013.04.014

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
We report concentrations of hydrogen (H) in upper mantle minerals of peridotites (olivine and pyroxenes) transported by alnöitic lavas, which erupted on the southwestern border of the Ontong Java Plateau (Malaita, Solomon Islands, West Pacific). Unpolarized FTIR analyses show that olivine, orthopyroxene, and diopside contain 2–32 ppm, 162–362 ppm and 159–459 ppm wt H2O, respectively. In the studied lherzolites, garnets are anhydrous. The concentration of hydrogen within individual olivine and pyroxene grains is almost homogeneous, indicating no evidence of dehydration or hydration by ionic diffusion. In the lherzolite, the concentration of hydrogen in olivine tends to increase weakly with depth (based on geothermobarometry), consistent with the increase of water solubility with increasing water fugacity as a function of pressure, but concentrations remain well below water-saturation values determined experimentally. The highest concentration of H in olivine (32 ppm wt H2O) is, however, found in refractory spinel harzburgites, which equilibrated at depths of 85 km., while deeper specimens as the high-temperature spinel harzburgites, and some of the garnet lherzolites, contain less hydrogen in olivine. Olivines from pyroxene- or pargasite-rich peridotites have also lower hydrogen concentrations. We interpret the high hydrogen concentrations in olivine from the refractory spinel harzburgites as due to (1) simultaneous hydration and metasomatism of the lithospheric mantle by a water-rich silicate melt/fluid, during which hydrogen follows MREE and where spinel harzburgite have experienced ‘stealth’ metasomatism, and/or (2) to a late ‘fleeting’ hydrogen metasomatism, which would hydrate the rock after this first ‘stealth’ metasomatism event. In the second case, the composition of the ‘fleeting’ percolating fluid (small volume fraction of very evolved fluids, with high volatiles concentration and transient properties) is likely to be linked to the decrease of the plume activity and resulting in the downwelling of the lithosphere asthenosphere boundary. The difference in hydrogen concentration between harzburgites and lherzolites could be linked to variation in trace elements in olivine induced by the first ‘stealth’ metasomatism alone or associated to the late ‘fleeting’ hydrogen metasomatism, triggered by the lack of secondary crystallization of clinopyroxenes in the harzburgite. To conclude, H concentrations in upper mantle minerals may thus be correlated to metasomatic events, with the later yielding variation of the mineral assemblage and trace element composition that constitute the peridotites.
ISSN: 0024-4937

hal-01143385
https://hal.archives-ouvertes.fr/hal-01143385
DOI : 10.1016/j.lithos.2014.11.005

Éditeur(s) : HAL CCSD
Résumé : This work deals with the dating of Mount Etna lava flows and eruptive fissure deposits to the last four millennia following field investigations and stratigraphic data (BRANCA et alii, 2011a). We have studied 24 of these volcanic products, including 301 large samples, through high precision archeomagnetic dating checked by 226Ra-230Th radiochronology, thus providing additional material to the previous paper by TANGUY et alii (2007). In most cases our results allow attributing ages to the historical period, although two flows are shown to be prehistoric. For the historic lavas, archeoma - gnetic ages can be defined within decades, except for three of them that erupted during a time span (Greco-Roman epoch) when the geomagnetic field underwent little variation. Although 60% of these volcanics exhibit ages comprised between 700 AD and 1850, only one (1285) is mentioned by contemporary written accounts. We conclude that i) historical documents alone are insufficient to reconstruct a coherent sequence of eruptions, and ii) a multidisciplinary approach is necessary to obtain a comprehensive eruptive history of such a very active volcano, useful for both scientific and civil protection purposes, even for such a geologically recent period as that of the last 10 or 20 centuries. Thanks to these new archeomagnetic and 226Ra-230Th data coupled with stratigraphic data, a comprehensive volcanic history of the still-outcropping Mount Etna volcanics is now available for the last 2,400 years. KEY WORDS: Etna volcano, archeomagnetic dating, 226Ra- 230Th dating, stratigraphy, historical account.
Italian Journal of Geosciences

hal-00758077
https://hal.archives-ouvertes.fr/hal-00758077
DOI : 10.3301/IJG.2012.01

Éditeur(s) : HAL CCSD
Résumé : International audience
The porosity (from values of <1% up to more than 50%, with a mean value of 36.5%) and permeability (from very low values to 20.4 D, with a mean value around 800 mD) of 38 plugs, with a diameter 40 mm, have been measured. These plugs were taken approximately every 1.5 m along a 100 m-long core, sampling a series of reefal carbonate platform lithofacies. A non-unique relationship between porosity and permeability is obtained. In addition, the porosity was measured from processing X-ray micro-tomography images with resolutions ranging from 0.42 to 190.0 µm and sampling volumes ranging from less than 1 µm3 to few cm3. Depending on the structure of the pore network, the computed porosity is, in some cases, controlled by the X-ray image resolution and the sampled volume. While high resolution is required to image micro-porous material, large samples with lower resolution images are necessary for identifying distributed vugs and millimetre-scale structures. This study shows that multi-resolution X-ray micro-tomography is an effective tool for characterizing the multi-scale pore structure of carbonate rocks and understanding how it may control key petrophysical parameters such as porosity and permeability.
Geological Society Special Publication

hal-01174157
https://hal.archives-ouvertes.fr/hal-01174157
DOI : 10.1144/SP406.12

Éditeur(s) : HAL CCSD Oxford University Press (OUP)
Résumé : International audience
Defining homologous genes is important in many evolutionary studies but raises obvious issues. Some of these issues are conceptual and stem from our assumptions of how a gene evolves, others are practical, and depend on the algorithmic decisions implemented in existing software. Therefore, to make progress in the study of homology, both ontological and epistemological questions must be considered. In particular, defining homologous genes cannot be solely addressed under the classic assumptions of strong tree thinking, according to which genes evolve in a strictly tree-like fashion of vertical descent and divergence and the problems of homology detection are primarily methodological. Gene homology could also be considered under a different perspective where genes evolve as ``public goods,'' subjected to various introgressive processes. In this latter case, defining homologous genes becomes a matter of designing models suited to the actual complexity of the data and how such complexity arises, rather than trying to fit genetic data to some a priori tree-like evolutionary model, a practice that inevitably results in the loss of much information. Here we show how important aspects of the problems raised by homology detection methods can be overcome when even more fundamental roots of these problems are addressed by analyzing public goods thinking evolutionary processes through which genes have frequently originated. This kind of thinking acknowledges distinct types of homologs, characterized by distinct patterns, in phylogenetic and nonphylogenetic unrooted or multirooted networks. In addition, we define `` family resemblances'' to include genes that are related through intermediate relatives, thereby placing notions of homology in the broader context of evolutionary relationships. We conclude by presenting some payoffs of adopting such a pluralistic account of homology and family relationship, which expands the scope of evolutionary analyses beyond the traditional, yet relatively narrow focus allowed by a strong tree-thinking view on gene evolution.
ISSN: 0737-4038

hal-01544794
https://hal.archives-ouvertes.fr/hal-01544794
DOI : 10.1093/molbev/mst228

Éditeur(s) : HAL CCSD American Geophysical Union
Résumé : International audience
This study describes a laboratory experiment on rip current circulations over a moveable bed. Rip current characteristics over eight contrasting nature-like beach morphologies are investigated. The seabed varied from reasonably alongshore uniform to strongly alongshore nonuniform with crescentic patterns and bar-rip morphologies, representative of a full morphological down-state sequence. The same offshore shore-normal waves were generated by the wavemaker for the eight situations with the same mean water level to study the sensitivity of rip current characteristics as a function of the beach morphology only. In each case, a 30 to 60 min video run was used to track a large number of drifters released within the surf zone. Results show the presence of classic rip current patterns with counterrotating cells and a relatively narrow offshore-directed jet varying from shore-normal to strongly skewed. Wave-driven circulations were strongly unstable. Computed standard deviations of flow intensity and direction provide high-resolution information on the spatial variability of rip current instabilities. Highly pulsating and weakly directionally variable offshore-directed flow is observed in the rip neck for well-developed bar-rip morphologies that turns into a weakly pulsating and highly directional variable rip current flow with decreasing beach alongshore nonuniformity. Proposing a definition of rip current intensity based on the rip current circulation geometry, rip current intensity was found to linearly increase with increasing measure of beach alongshore nonuniformity within both the low-energy and moderate-energy rip current regimes. To date, our laboratory experiment provides the first extensive quantitative rip current information during a full down-state sequence for a given wave condition.
ISSN: 0148-0227

hal-00602920
https://hal.archives-ouvertes.fr/hal-00602920
DOI : 10.1029/2010JC006343

Éditeur(s) : HAL CCSD Springer Verlag
Résumé :  
In studying the ant genus Azteca, a Neotropical group of arboreal species, we aimed to determine the extent to which the ants use predation and/or aggressiveness to protect their host plants from defoliating insects. We compared a territorially dominant, carton-nester, Azteca chartifex, and three plant-ant species. Azteca alfari and Azteca ovaticeps are associated with the myrmecophyte Cecropia (Cecropiaceae) and their colonies shelter in its hollow branches; whereas Azteca bequaerti is associated with Tococa guianensis (Melastomataceae) and its colonies shelter in leaf pouches situated at the base of the laminas. Whereas A. bequaerti workers react to the vibrations transmitted by the lamina when an alien insect lands on a leaf making it unnecessary for them to patrol their plant, the workers of the three other species rather discover prey by contact. The workers of all four species use a predatory behaviour involving spread-eagling alien insects after recruiting nestmates at short range, and, in some cases, at long range. Because A. alfari and A. ovaticeps discard part of the insects they kill, we deduced that the workers' predatory behaviour and territorial aggressiveness combine in the biotic defence of their host tree.
ISSN: 0028-1042

hal-01032079
https://hal.archives-ouvertes.fr/hal-01032079
DOI : 10.1007/s00114-008-0448-y

Éditeur(s) : HAL CCSD
Résumé : International audience
The main biological function of reaction wood is to act as “muscle” for trees, enabling them to control their posture and right stems when they are permanently disturbed from their set-point inclination by gravity or winds. The key property to achieve this function is the development of high mechanical stress during the formation of reaction wood cells, called “maturation strains”. Moreover, this function is basically performed through the asymmetric formation of wood (in quantity or quality) around the tree circumference. This asymmetry enables stems to bend upward or to compensate for the downward bending induced by gravity, as an asymmetric force associated to maturation strains creates a bending moment (i.e. one side of the stem “pulls” the other one). We will discuss the traits (cross sectional size and shape, wood features as G fibers or microfibril angle, eccentric growth even in usual or extreme cases as buttresses, total biomass growth and height of center of mass, stem lean and set-point angle) involved to understand how the posture control works. We will give simple formulas to estimate a “muscle efficiency” from biomechanical modeling. We will give practical methods to estimate all the involved traits, especially maturation strains from direct and indirect measurements, in peripheral functional wood or by retrospective dendrochronological analysis. Then, we will illustrate how tree stem tropisms and especially gravitropism, widely studied by physiologists, are key processes in natural ecosystems, through practical examples from tropical rainforest tree communities and regeneration of European mixed beech forests. Using the previous definition of postural control efficiency, we will show that the cross section size is rapidly a limiting factor, opposing the extreme strategies of flexible small stems, which bend easily but also right themselves quickly, to stiff big stems. Lastly, as wood in living trees ensures general storage, defence, vascular and skeletal functions, we will ask general questions about synergies and trade-offs between posture control and other functions.
Botany 2014 : new frontiers in botany
Boise, United States

hal-01627031
https://hal.archives-ouvertes.fr/hal-01627031

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
The cyanobacteria-derived neurotoxin β-methylamino-l-alanine (BMAA) represents a plausible environmental trigger for amyotrophic lateral sclerosis (ALS), a debilitating and fatal neuromuscular disease. With the eutrophication of water bodies, cyanobacterial blooms and their toxins are becoming increasingly prevalent in France, especially in the Brittany region. Cyanobacteria are monitored at only a few recreational sites, preventing an estimation of exposure of the human population. By contrast, phosphorus, a limiting nutrient for cyanobacterial growth and thus considered a good proxy for cyanobacteria exposure, is monitored in many but not all surface water bodies. Our goal was to develop a geographic exposure indicator that could be used in epidemiological research. We considered the total phosphorus (TP) concentration (mg/L) of samples collected between October 2007 and September 2012 at 179 monitoring stations distributed throughout the Brittany region. Using readily available spatial data, we computed environmental descriptors at the watershed level with a Geographic Information System. Then, these descriptors were introduced into a backward stepwise linear regression model to predict the median TP concentration in unmonitored surface water bodies. TP concentrations in surface water follow an increasing gradient from West to East and inland to coast. The empirical concentration model included five predictor variables with a fair coefficient of determination (R2 = 0.51). The specific total runoff and the watershed slope correlated negatively with the TP concentrations (p = 0.01 and p < 10− 9, respectively), whereas positive associations were found for the proportion of built-up area, the upstream presence of sewage treatment plants, and the algae volume as indicated by the Landsat red/green reflectance ratio (p < 0.01, p < 10− 6 and p < 0.01, respectively). Complementing the monitoring networks, this geographical modeling can help estimate TP concentrations at the watershed level, delivering a proxy for cyanobacteria exposure that can be used along with other risk factors in further ALS epidemiologic case–control studies
ISSN: 0160-4120

hal-01175538
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01175538
DOI : 10.1016/j.envint.2015.04.007
PUBMED : 25913322

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Prediction of ice mass flow and associated dynamics is pivotal at a time of climate change. Ice flow is dominantly accommodated by the motion of crystal defects – the dislocations. In the specific case of ice, their observation is not always accessible by means of the classical tools such as X-ray diffraction or transmission electron microscopy (TEM). Part of the dislocation population, the geometrically necessary dislocations (GNDs) can nevertheless be constrained using crystal orientation measurements via electron backscattering diffraction (EBSD) associated with appropriate analyses based on the Nye (1950) approach. The present study uses the Weighted Burgers Vectors, a reduced formulation of the Nye theory that enables the characterization of GNDs. Applied to ice, this method documents, for the first time, the presence of dislocations with non-basal or Burgers vectors. These or dislocations represent up to of the GNDs observed in laboratory-deformed ice samples. Our findings offer a more complex and comprehensive picture of the key plasticity processes responsible for polycrystalline ice creep and provide better constraints on the constitutive mechanical laws implemented in ice sheet flow models used to predict the response of Earth ice masses to climate change.
ISSN: 0012-821X

hal-01685565
https://hal.archives-ouvertes.fr/hal-01685565
DOI : 10.1016/j.epsl.2017.06.020

Éditeur(s) : HAL CCSD Frontiers
Résumé : International audience
Glufosinate ammonium (GLA) is one of the most widely used herbicides in agriculture. As is the case for most pesticides, potential adverse effects of GLA have not been studied from the perspective of developmental neurotoxicity. Early pesticides exposure may weaken the basic structure of the developing brain and cause permanent changes leading to a wide range of lifelong effects on health and/or behavior. Here, we addressed the developmental impact of GLA by exposing female mice to low dose GLA during both pre- and postnatal periods and analyzed potential developmental and behavioral changes of the offspring during infancy and adulthood. A neurobehavioral test battery revealed significant effects of GLA maternal exposure on early reflex development, pup communication, affiliative behaviors, and preference for social olfactory cues, but emotional reactivity and emotional memory remained unaltered. These behavioral alterations showed a striking resemblance to changes seen in animal models of Autistic Spectrum Disorders. At the brain level, GLA maternal exposure caused some increase in relative brain weight of the offspring. In addition, reduced expression of Pten and Peg3 - two genes implicated in autism-like deficits - was observed in the brain of GLA-exposed pups at postnatal day 15. Our work thus provides new data on the link between pre- and postnatal exposure to the herbicide GLA and the onset of autism-like symptoms later in life. It also raises fundamental concerns about the ability of current safety testing to assess risks of pesticide exposure during critical developmental periods.
ISSN: 1662-5153

hal-01121829
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01121829
PUBMED : 25477793
DOI : 10.3389/fnbeh.2014.00390
PUBMEDCENTRAL : PMC4238406

Éditeur(s) : HAL CCSD Springer Verlag (Germany)
Résumé : In this paper we study merosity in the genus Urospatha within the framework of a resolved phylogeny of the Araceae. We analyse how a transition from dimerous or tetramerous merosity to pentamerous or hexamerous merosity can occur developmentally in the Lasioideae. In Urospatha, initiation of floral primordia along the inflorescence is acropetal, while development of flowers is basipetal. This indicates the presence of two distinct phases in the development of the Urospatha inflorescence. The first phase corresponds to initiation of flowers and establishment of the phyllotactic pattern, and the second phase to differentiation of floral organs. Urospatha is characterized by the presence of trimerous, tetramerous, pentamerous and rarely hexamerous flowers. In all types of flowers, the stamens are closely associated and opposite to the tepals. Pentamerous flowers are formed by addition of a sector comprising a stamen and tepal. Likewise, in the case of hexamerous flowers, two sectors are added. In the Lasioideae, the increase in the number of tepals and stamens is linked with two developmental processes that have appeared independently in the subfamily: (1) addition of one or two stamen-petal sectors (Anaphyllopsis and Urospatha), and (2) independent increase in the number of tepals and stamens on whorls, more or less organized and inserted in alternate position (Dracontium). Tetramerous whorls as they occur in basal Lasioideae would be homologous to two dimerous whorls from an evolutionary point of view.
ISSN: 0378-2697

hal-01019867
https://hal.archives-ouvertes.fr/hal-01019867
DOI : 10.1007/s00606-011-0475-6

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
BACKGROUND: Mutations in the telomerase complex (TERT and TR) are associated with pulmonary fibrosis and frequent hematologic manifestations. The aim of this study was to characterize the prognosis of lung transplantation in patients with TERT or TR mutations. METHODS: Patients with documented TERT or TR mutations who received a lung transplant between 2007 and 2013 in France were identified via an exhaustive search of the lung transplantation network, one expert genetic laboratory, and the clinical research network on rare pulmonary diseases. RESULTS: There were 9 patients (7 men) with TERT (n = 6) or TR (n = 3) mutations who received a single (n = 8) or a double (n = 1) lung transplant for pulmonary fibrosis. Median age was 50 years (range, 35-61 years) at diagnosis and 52 years (range, 37-62 years) at the time of lung transplantation. Thrombocytopenia was present in 7 patients before lung transplantation. After lung transplantation, 6 patients developed myelodysplasia and/or bone marrow failure, directly contributing to death in 4 cases. Anemia was observed in 9 patients, and neutropenia was observed in 3 patients. The median survival after lung transplantation was 214 days (range, 59-1,709 days). CONCLUSIONS: Patients with mutations of the telomerase complex are at high risk of severe hematologic complications after lung transplantation, in particular, bone marrow failure. Specific recommendations should be developed for appropriate guidance regarding hematologic risk assessment before transplantation and management of the post-transplantation immunosuppressive regimen.
ISSN: 1053-2498

hal-01146848
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01146848
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01146848/document
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01146848/file/Severe%20hematological%20complications%20after%20lung%20transplantation_accepted.pdf
DOI : 10.1016/j.healun.2014.11.010