Éditeur(s) : Amer Geophysical Union
Résumé : An analysis is presented for the spatial and intensity distributions of North Atlantic extreme atmospheric events crossing the buoyant Amazon-Orinoco freshwater plume. The sea surface cooling amplitude in the wake of an ensemble of storm tracks traveling in that region is estimated from satellite products for the period 1998-2012. For the most intense storms, cooling is systematically reduced by approximate to 50% over the plume area compared to surroundings open-ocean waters. Historical salinity and temperature observations from in situ profiles indicate that salt-driven vertical stratification, enhanced oceanic heat content, and barrier-layer presence within the plume waters are likely key oceanic factors to explain these results. Satellite SMOS surface salinity data combined with in situ observations are further used to detail the oceanic response to category 4 hurricane Igor in 2010. Argo and satellite measurements confirm the haline stratification impact on the cooling inhibition as the hurricane crossed the river plume. Over this region, the SSS mapping capability is further tested and demonstrated to monitor the horizontal distribution of the vertical stratification parameter. SMOS SSS data can thus be used to consistently anticipate the cooling inhibition in the wake of TCs traveling over the Amazon-Orinoco plume region.
Journal Of Geophysical Research-oceans (0148-0027) (Amer Geophysical Union), 2014-12 , Vol. 119 , N. 12 , P. 8271-8295

Droits : 2014. American Geophysical Union. All Rights Reserved.
http://archimer.ifremer.fr/doc/00252/36326/34855.pdf
http://archimer.ifremer.fr/doc/00252/36326/34856.pdf
DOI:10.1002/2014JC010107
http://archimer.ifremer.fr/doc/00252/36326/

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Kimberlites of the Udachnaya-East pipe (Siberia) include a uniquely dry and serpentine-free rock type with anomalously high contents of chlorine (Cl ≤ 6.1 wt%), alkalies (Na2O + K2O ≤ 10 wt%) and sulfur (S ≤ 0.50 wt%), referred to as a “salty” kimberlite. The straightforward interpretation is that the Na-, K-, Cl- and S-rich components originate directly from a carbonate-chloride kimberlitic magma that is anhydrous and alkali-rich. However, because brines and evaporites are present on the Siberian craton, previous studies proposed that the kimberlitic magma was contaminated by the assimilation of salt-rich crustal rocks. To clarify the origin of high Cl, alkalies and S in this unusual kimberlite, here we determine its sulfur speciation and isotopic composition and compare it to that of non-salty kimberlites and kimberlitic breccia from the same pipe, as well as potential contamination sources (hydrothermal sulfides and sulfates, country-rock sediment and brine collected in the area). The average δ34S of sulfides is − 1.4 ± 2.2‰ in the salty kimberlite, 2.1 ± 2.7‰ in the non-salty kimberlites and 14.2 ± 5.8‰ in the breccia. The average δ34S of sulfates in the salty kimberlites is 11.1 ± 1.8‰ and 27.3 ± 1.6‰ in the breccia. In contrast, the δ34S of potential contaminants range from 20 to 42‰ for hydrothermal sulfides, from 16 to 34‰ for hydrothermal sulfates, 34‰ for a country-rock sediment (Chukuck suite) and the regional brine aquifer. Our isotope analyses show that (1) in the salty kimberlites, neither sulfates nor sulfides can be simply explained by brine infiltration, hydrothermal alteration or the assimilation of known salt-rich country rocks and instead, we propose that they are late magmatic phases; (2) in the non-salty kimberlite and breccia, brine infiltration lead to sulfate reduction and the formation of secondary sulfides – this explains the removal of salts, alkali-carbonates and sulfates, as well as the minor olivine serpentinization; (3) hydrothermal sulfur was added to the kimberlitic breccia, but not to the massive kimberlites. In situ measurements of sulfides confirm this scenario, clearly showing the addition of two sulfide populations in the breccia (pyrite-pyrrhotites with average δ34S of 7.9 ± 3.4‰ and chalcopyrites with average δ34S of 38.0 ± 0.4‰) whereas the salty and non-salty kimberlites preserve a unique population of djerfisherites (Cl- and K-rich sulfides) with δ34S values within the mantle range. This study provides the first direct evidence of alkaline igneous rocks in which magmatic sulfate is more abundant than sulfide. Although sulfates have been rarely reported in mantle materials, sulfate-rich melts may be more common in the mantle than previously thought and could balance the sulfur isotope budget of Earth's mantle.
ISSN: 0009-2541

hal-01571982
https://hal.archives-ouvertes.fr/hal-01571982
DOI : 10.1016/j.chemgeo.2016.10.037

Éditeur(s) : HAL CCSD Springer Verlag/EDP Sciences
Résumé :  
On 10 trees from 10 species of French Guyana tropical rainforest in a clear active process of restoring verticality growth strains were measured in situ in order to determine the occurrence of tension wood within samples. Wood specimens were cut in the vicinity of the growth strains measurements in order to measure some mechanical and physical properties. As suspected, tensile growth strains was very much higher in tension wood zone, because longitudinal modulus of elasticity was slightly higher. Longitudinal shrinkage was also much higher in tension wood than in opposite wood.
ISSN: 1286-4560

hal-01032110
https://hal.archives-ouvertes.fr/hal-01032110
DOI : 10.1051/forest:2007027

Éditeur(s) : HAL CCSD Springer Verlag
Résumé :  
Growth strains were measured in situ in nine trees of three species from a French Guiana tropical rainforest in a clearly active verticality restoration process. The aim was to detect tension wood within the samples. Wood specimens were cut in the vicinity of the growth strain measurements in order to determine the microfibril angle and some mechanical and physical properties. As suspected, tensile growth strain was much higher in tension wood zones, as shown by the slightly higher longitudinal modulus of elasticity. Conversely, tension wood showed reduced compression strength. Longitudinal shrinkage was much higher in tension wood than in opposite wood. Clear relationships between the microfibril angle and longitudinal properties were noted in comparison (i) with those observed in gymnosperm compression wood and (ii) with expected relationships from the organization of wood fibres cell wall structure.
ISSN: 0043-7719

hal-01032114
https://hal.archives-ouvertes.fr/hal-01032114
DOI : 10.1007/s00226-010-0323-9

Éditeur(s) : HAL CCSD
Résumé : International audience
The present research work is a part of the KUNSHEN Franco-Taiwanese research project which aims at investigating the hydro/morphodynamics of barrier islands driven by typhoon events. This study focuses on the impact of the Talim tropical storm on the Wan-tzu-liao sand barrier (Taiwan) in terms of water level rising and watertable overheight. In-situ measurements are provided by a cross-shore network of pressure sensors extended from the intertidal zone to the top of the barrier. Extreme offshore wave conditions are encountered during Talim, with significant wave height greater than 10m at the storm peak. It is shown that measured setups are smaller than those predicted by usual empirical parameterization. Groundwater dynamics is strongly affected by the storm, with watertable overheight of the order of one meter under the barrier top. Watertable dynamics is influenced by waves, tides and rainfalls.
Coastal Dynamics 2013

hal-00831573
https://hal.archives-ouvertes.fr/hal-00831573

Éditeur(s) : HAL CCSD American Association for the Advancement of Science
Résumé : International audience
Large earthquakes produce crustal deformation that can be quantified by geodetic measurements, allowing for the determination of the slip distribution on the fault. We used data from Global Positioning System (GPS) networks in Central Chile to infer the static deformation and the kinematics of the 2010 moment magnitude (M-w) 8.8 Maule megathrust earthquake. From elastic modeling, we found a total rupture length of similar to 500 kilometers where slip (up to 15 meters) concentrated on two main asperities situated on both sides of the epicenter. We found that rupture reached shallow depths, probably extending up to the trench. Resolvable afterslip occurred in regions of low coseismic slip. The low-frequency hypocenter is relocated 40 kilometers southwest of initial estimates. Rupture propagated bilaterally at about 3.1 kilometers per second, with possible but not fully resolved velocity variations.
ISSN: 0036-8075

hal-00783213
https://hal.archives-ouvertes.fr/hal-00783213
DOI : 10.1126/science.1204132

Éditeur(s) : HAL CCSD Elsevier
Résumé : Analyses of tree diversity and community composition in tropical rain forests are usually based either on general herbarium data or on a restricted number of botanical plots. Despite their high taxonomic accuracy, both types of data are difficult to extrapolate to landscape scales. Meanwhile, forestry surveys provide quantitative occurrence data on large areas, and are thus increasingly used for landscape-scale analyses of tree diversity. However, the reliability of these approaches has been challenged because of the ambiguity of the common (vernacular) names used by foresters and the complexity of tree taxonomy in those hyper-diverse communities.We developed and tested a novel approach to evaluate taxonomic reliability of forestry surveys and to propagate the resulting uncertainty in the estimates of several diversity indicators (alpha and beta entropy, Fisher-alpha and Sørensen similarity). Our approach is based on Monte-Carlo processes that simulate communities by taking into account the expected accuracy and reliability of common names. We tested this method in French Guiana, on 9 one-hectare plots (4279 trees – DBH ⩾ 10 cm) for which both common names and standardized taxonomic determinations were available. We then applied our method of community simulation on large forestry inventories (560 ha) at the landscape scale and compared the diversity indices obtained for 10 sites with those computed from precise botanical determination situated at the same localities.We found that taxonomic reliability of forestry inventories varied from 22% (species level) to 83% (family level) in this Amazonian region. Indices computed directly with raw forestry data resulted in incorrect values, except for Gini–Simpson beta-diversity. On the contrary, our correction method provides more accurate diversity estimates, highly correlated with botanical measurements, for almost all diversity indices at both regional and local scales. We obtained a robust ranking of sites consistent with those shown by botanical inventories.These results show that (i) forestry inventories represent a significant part of taxonomic information, (ii) the relative diversity of regional sites can be successfully ranked using forestry inventory data using our method and (iii) forestry inventories can valuably contribute to the detection of large-scale diversity patterns when biases are well-controlled and corrected.The tools we developed as R-functions are available in supplementary material and can be adapted with local parameters to be used for forest management and conservation issues in other regional contexts
ISSN: 0378-1127

hal-01204219
https://hal.archives-ouvertes.fr/hal-01204219
DOI : 10.1016/j.foreco.2014.05.045
PRODINRA : 286554

Éditeur(s) : HAL CCSD Landes Bioscience
Résumé : International audience
In 2008 we published the first set of guidelines for standardizing research in autophagy. Since then, research on this topic has continued to accelerate, and many new scientists have entered the field. Our knowledge base and relevant new technologies have also been expanding. Accordingly, it is important to update these guidelines for monitoring autophagy in different organisms. Various reviews have described the range of assays that have been used for this purpose. Nevertheless, there continues to be confusion regarding acceptable methods to measure autophagy, especially in multicellular eukaryotes. A key point that needs to be emphasized is that there is a difference between measurements that monitor the numbers or volume of autophagic elements (e.g., autophagosomes or autolysosomes) at any stage of the autophagic process vs. those that measure flux through the autophagy pathway (i.e., the complete process); thus, a block in macroautophagy that results in autophagosome accumulation needs to be differentiated from stimuli that result in increased autophagic activity, defined as increased autophagy induction coupled with increased delivery to, and degradation within, lysosomes (in most higher eukaryotes and some protists such as Dictyostelium) or the vacuole (in plants and fungi). In other words, it is especially important that investigators new to the field understand that the appearance of more autophagosomes does not necessarily equate with more autophagy. In fact, in many cases, autophagosomes accumulate because of a block in trafficking to lysosomes without a concomitant change in autophagosome biogenesis, whereas an increase in autolysosomes may reflect a reduction in degradative activity. Here, we present a set of guidelines for the selection and interpretation of methods for use by investigators who aim to examine macroautophagy and related processes, as well as for reviewers who need to provide realistic and reasonable critiques of papers that are focused on these processes. These guidelines are not meant to be a formulaic set of rules, because the appropriate assays depend in part on the question being asked and the system being used. In addition, we emphasize that no individual assay is guaranteed to be the most appropriate one in every situation, and we strongly recommend the use of multiple assays to monitor autophagy. In these guidelines, we consider these various methods of assessing autophagy and what information can, or cannot, be obtained from them. Finally, by discussing the merits and limits of particular autophagy assays, we hope to encourage technical innovation in the field.
Autophagy

hal-00735751
https://hal.archives-ouvertes.fr/hal-00735751
PUBMED : 22966490