Éditeur(s) : HAL CCSD Wiley/Blackwell
Résumé : 4 pages
International audience
This article documents the addition of 268 microsatellite marker loci to the Molecular Ecology Resources Database. Loci were developed for the following species: Alburnoides bipunctatus, Chamaerops humilis, Chlidonias hybrida, Cyperus papyrus, Fusarium graminearum, Loxigilla barbadensis, Macrobrachium rosenbergii, Odontesthes bonariensis, Pelteobagrus vachelli, Posidonia oceanica, Potamotrygon motoro, Rhamdia quelen, Sarotherodon melanotheron heudelotii, Sibiraea angustata, Takifugu rubripes, Tarentola mauritanica, Trimmatostroma sp. and Wallago attu. These loci were cross-tested on the following species: Alburnoides fasciatus, Alburnoides kubanicus, Alburnoides maculatus, Alburnoides ohridanus, Alburnoides prespensis, Alburnoides rossicus, Alburnoides strymonicus, Alburnoides thessalicus, Alburnoides tzanevi, Carassius carassius, Fusarium asiaticum, Leucaspius delineatus, Loxigilla noctis dominica, Pelecus cultratus, Phoenix canariensis, Potamotrygon falkneri, Trachycarpus fortune and Vimba vimba.
ISSN: 1755-098X

hal-00823716
https://hal.archives-ouvertes.fr/hal-00823716
DOI : 10.1111/1755-0998.12095
PUBMED : 23521844

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
We investigate the timing of end of motion along the South Tibet Detachment System (STDS), a major normal fault system that runs parallel to the Himalayan range for more than 1500 km. Near Dinggye (similar to 28 degrees 10'N, 87 degrees 40'E), the STD dips similar to 10 +/- 5 degrees to the North and separates Paleozoic Tethyan series from Upper Himalayan Crystalline Series (UHCS). Immediately below the STD, the UHCS is highly deformed in the STD shear zone, lineations trend NNE and the shear senses are top to the NE. In micaschist, the P-T path constrained by pseudosection and garnet chemistry, shows successive metamorphic conditions of similar to 0.6 GPa and similar to 550 degrees C and 0.5 GPa and 625 degrees C. U/Pb dating of monazites and zircons in deformed and undeformed leucogranites suggests that ductile deformation lasted until at least similar to 16 Ma but ended prior to similar to 15 Ma in the STD shear zone similar to 100 m below the detachment. Ar/Ar micas ages in the footwall span between similar to 14.6 and 13.6 Ma, indicating rapid cooling down to similar to 320 degrees C, and suggesting persistence of normal faulting, at that time. The STDS is cut and offset by the N-S trending Dinggye active normal fault which initiated prior to 11 Ma thus providing a minimum bound for the end of STDS motion. These data are interpreted as reflecting 0.3 GPa (11 km) to 0.6 GPa (22 km) of exhumation along the STDS starting prior to similar to 16 Ma, ending between 13.6 and 11 Ma. The 1000 km long stretch of the STDS east of the Gurla Mandata probably stopped almost synchronously between 13 and 11 Ma ago, coevally with a sudden switch from NNE-SSW to E-W extension at the top of the accretionary prism, with a jump of the major thrust from the lower Main Central Thrust (MCTI) to the Main Boundary Thrust (MBT), and with a change in the India and Asia convergence direction. This synchronism is probably better explained in the frame of a thrust wedge or thrust system model than a lower channel flow model. West of the Gurla Mandata the STDS appears to stop 5 to 3 Ma earlier, possibly related to local interactions with the Karakorum fault in a way that needs to be understood.
ISSN: 0012-821X

hal-00475652
https://hal.archives-ouvertes.fr/hal-00475652
DOI : 10.1016/j.epsl.2009.12.035

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
The Paleozoic-early Mesozoic geology of Tibet was controlled by the rift-drift, seafloor spreading and subduction zone tectonics of a Paleo-Tethyan realm, which evolved between the West Cathaysides (WC) and the East Cimmerides (EC). Different suture zones with ophiolites and ophiolitic mélanges, high-pressure metamorphic belts, magmatic arcs and accretionary prism complexes separating different terranes mark multiple subduction-accretion systems within this Paleo-Tethyan domain, reminiscent of the modern Western Pacific Ocean. Discrete basins separated by different continental blocks and magmatic arcs constituted a complex paleogeography of Paleo-Tethys, and these oceanic strands were closed as a result of subduction with different polarities during the late Paleozoic-Triassic. The Longmu Tso Shuanghu-Changning Menglian Suture zone (LS-CMS) in Tibet represents the main tectonic boundary between the WC and EC that developed in the Devonian. The East Kunlun-A’nyemaqen oceanic slab was subducted northward beneath the East Kunlun terrane in northern Tibet, whereas the Sumdo oceanic slab was subducted northward beneath the South Qiangtang-North Lhasa terrane in southern Tibet. The Longmu Tso Shuanghu-Changning Menglian and Jinshajiang-Ailaoshan-Song Ma ophiolites were developed and emplaced in subduction-accretion systems with opposite polarities (westward and eastward) beneath the North Qiangtang-Qamdo-Simao-Indochina terrane in central Tibet. The Jinshajiang-Ailaoshan-Song Ma oceanic slab was subducted westward beneath the North Qiangtang-Simao-Indochina terrane along the Jinshajiang and Ailaoshan-Song Ma trenches in a trench-ridge-trench triple junction plate configuration. The Emeishan mantle plume produced a large Permian basaltic terrane, developed on the western passive margin of the South China block. The final closure of the Paleo-Tethyan oceanic branches resulted in continental collisions and development of a vast Indosinian orogenic collage in the latest Triassic-Jurassic.
ISSN: 0743-9547

insu-01119604
https://hal-insu.archives-ouvertes.fr/insu-01119604
https://hal-insu.archives-ouvertes.fr/insu-01119604/document
https://hal-insu.archives-ouvertes.fr/insu-01119604/file/Xu-JAES-2015.pdf
DOI : 10.1016/j.jseaes.2015.01.021

Éditeur(s) : HAL CCSD Oxford University Press
Résumé : International audience
The BioMart Community Portal (www.biomart.org) is a community-driven effort to provide a unified interface to biomedical databases that are distributed worldwide. The portal provides access to numerous database projects supported by 30 scientific organizations. It includes over 800 different biological datasets spanning genomics, proteomics, model organisms, cancer data, ontology information and more. All resources available through the portal are independently administered and funded by their host organizations. The BioMart data federation technology provides a unified interface to all the available data. The latest version of the portal comes with many new databases that have been created by our ever-growing community. It also comes with better support and extensibility for data analysis and visualization tools. A new addition to our toolbox, the enrichment analysis tool is now accessible through graphical and web service interface. The BioMart community portal averages over one million requests per day. Building on this level of service and the wealth of information that has become available, the BioMart Community Portal has introduced a new, more scalable and cheaper alternative to the large data stores maintained by specialized organizations.
ISSN: 0305-1048

hal-01146849
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01146849
DOI : 10.1093/nar/gkv350
PUBMED : 25897122

Éditeur(s) : HAL CCSD American Geophysical Union (AGU)
Résumé : International audience
The present-day topography of the Tian Shan range is considered to result from crustal shortening related to the ongoing India-Asia collision that started in the early Tertiary. In this study we report evidence for several episodes of localized tectonic activity which occurred prior to that major orogenic event. Apatite fission track analysis and (U-Th)/He dating on apatite and zircon indicate that inherited Paleozoic structures were reactivated in the late Paleozoic-early Mesozoic during a Cimmerian orogenic episode and also in the Late Cretaceous-Paleogene (around 65-60 Ma). These reactivations could have resulted from the accretion of the Kohistan-Dras arc or lithospheric extension in the Siberia-Mongolia zone. Activity resumed in the late Mesozoic prior to the major Tertiary orogenic phase. Finally, the ongoing deformation, which again reactivates inherited tectonic structures, tends to propagate inside the endoreic basins that were preserved in the range, leading to their progressive closure. This study demonstrates the importance of inherited structures in localizing the first increments of the deformation before it propagates into yet undeformed areas.
ISSN: 0278-7407

Droits : info:eu-repo/semantics/OpenAccess
hal-00551323
https://hal.archives-ouvertes.fr/hal-00551323
https://hal.archives-ouvertes.fr/hal-00551323/document
https://hal.archives-ouvertes.fr/hal-00551323/file/2010TC002712.pdf
DOI : 10.1029/2010TC002712

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : International audience
The upward oil migration in a transparent and rough fracture containing a liquid of higher density is studied experimentally using a light transmission technique. The aperture heterogeneity is also measured by light transmission. The injection of oil in a fracture containing a heavier fluid produces a gravitational fingering instability. Depending on the injection velocity (capillary number, Ca) and the density difference between the two fluids (Bond number, Bo), different patterns are observed during the oil displacements. The width of the finger and its velocity are measured as a function of Bo and Ca. A stability analysis of the interface, based on a generalised Darcy equation in a two-dimensional fracture, allows an accurate description of the experimental results. The order of magnitude of the finger width and its velocity are in good agreement with the calculations, with small disparities due to various unknown fluid flow parameters: capillary pressure, finger thickness in the gap of the fracture, finger tortuosity and oil velocity field into the finger. The theoretical approach allows constructing a (Ca, Bo) phase diagram of stability of the interface.
ISSN: 0169-3913

hal-00429329
https://hal.archives-ouvertes.fr/hal-00429329
DOI : 10.1007/s11242-009-9340-2

Éditeur(s) : HAL CCSD American Geophysical Union (AGU)
Résumé : International audience
The Tian Shan Mountains constitute central Asia's longest and highest mountain range. Understanding their Cenozoic uplift history thus bears on mountain building processes in general, and on how deformation has occurred under the influence of the India-Asia collision in particular. In order to help decipher the uplift history of the Tian Shan, we collected 970 samples for magnetostratigraphic analysis along a 4571-m-thick section at the Jingou River (Xinjiang Province, China). Stepwise alternating field and thermal demagnetization isolate a linear magnetization component that is interpreted as primary. From this component, a magnetostratigraphic column composed of 67 polarity chrons are correlated with the reference geomagnetic polarity timescale between ~1 Ma and ~23.6 Ma, with some uncertainty below ~21 Ma. This correlation places precise temporal control on the Neogene stratigraphy of the southern Junggar Basin and provides evidence for two significant stepwise increases in sediment accumulation rate at ~16–15 Ma and ~11–10 Ma. Rock magnetic parameters also undergo important changes at ~16–15 Ma and ~11–10 Ma that correlate with changes in sedimentary depositional environments. Together with previous work, we conclude that growth history of the modern Tian Shan Mountains includes two pulses of uplift and erosion at ~16–15 Ma and ~11–10 Ma. Middle to upper Tertiary rocks around the Tian Shan record very young (<~5 Ma) counterclockwise paleomagnetic rotations, on the order of 15° to 20°, which are interpreted as because of strain partitioning with a component of sinistral shear that localized rotations in the piedmont.
ISSN: 0278-7407

insu-00376345
https://hal-insu.archives-ouvertes.fr/insu-00376345
https://hal-insu.archives-ouvertes.fr/insu-00376345/document
https://hal-insu.archives-ouvertes.fr/insu-00376345/file/2007TC002137.pdf
DOI : 10.1029/2007TC002137

Éditeur(s) : HAL CCSD
Résumé : The Karakorum Fault zone (KFZ), lying in the west of the Tibetan plateau, is an important dextral strike-slip fault and the important northern geological boundary of the west Himalaya. In the AyilaRi' gyu Range-Gai Basin area lying in the southeast of the KFZ, Ar-40/Ar-39 thermochronologic analysis was performed on the syn-tectonic minerals in the, metamorphic rocks in the Karakorum ductile shear zone, with the base of petrology and deformation structure researches. According to the microstructure features, the minerals in the shear zone recorded the continuous deformation from high ( > 600 degrees C) to low temperature ( < 250 degrees C) appeared as that the nearly horizontal dextral shearing has transformed into the oblique dextral normal slip, made the greenschist facies of deformation stack oil the early medium-high temperature deformation, indicated the uplift during the slip. The thermochronologic revealed the continuous shear process from the early Miocene to 4Ma at least, which containing three rapid cooling stage: from 25 similar to 22Ma to 21 similar to 18Ma, the deformation locally stopped or slower in the, shallow high temperature shear process; from 15Ma to 12Ma, the rapid uplift of the AyilaRi' gyu Range, the initial formation of the Gar Basin together with the main deep incision of river during the strip-slip of the KFZ; since 9Ma, the AyilaRi' gyu Range has increased the rapid uplift and the Gar Basin has formed finally. According to the different levels of deformation and the dextral displacement of the surface landform with different ages, the long term slip rate and the uplift rate indicated the intense dextral strike slip and uplift associated since the late Quarternary Period.
Acta Petrologica Sinica

hal-00411572
https://hal.archives-ouvertes.fr/hal-00411572

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
A suite of eclogite xenoliths from the Roberts Victor kimberlite (South Africa) is remarkable for its high abundances of base metal sulfides (BMS; up to 2 modal %). However, while sulfides are nearly ubiquitous in Type I eclogites (garnet > 0.07% Na2O), Type II eclogites (garnet < 0.07% Na2O) systematically lack sulfides. Two different sulfide assemblages are recognised within the Type I xenolith suite. Both populations are polyphase Cu-Ni-Fe sulfides, one characterised by the pyrrhotite (Po) + pentlandite (Pn) + chalcopyrite (Cp) assemblage and the other by the smythite/violarite (Smy/Vi) + (Ni)pyrite (Py) + Cp assemblage. The latter is the most abundant assemblage and reflects the supergene alteration of the "primary" Po + Pn + Cp assemblage. This process overprints the original composition of the sulfides by remobilising elements such as S, Fe, Ni, Se and Te. In the Type I eclogites, BMS occur as inclusions within silicates (garnet and clinopyroxene) and as interstitial grains. No chemical differences were observed between enclosed and interstitial sulfides. However, their relative abundances are correlated, indicating a similar origin. The Po + Pn + Cp assemblage is identical to eclogitic sulfides previously described in some Roberts Victor diamonds. Silicate-enclosed sulfides could appear to be early phases, but they are restricted to the outer parts of the silicate grains, suggesting a late incorporation during partial recrystallisation of silicate phases, induced by fluid-rock percolation-reaction during a metasomatic event. Positive whole-rock correlations between Se and (La/Sm)N⁎ and between Cu and ΣLREEN⁎ indicate a direct link between sulfide content and the enrichment of Mg + incompatible elements in the Type I eclogites, further supporting a metasomatic origin of the sulfide component. Similarly, a negative correlation between ΣLREEN⁎ and Cucpx implies that the metasomatic agent was at least partially composed of S-rich fluid (e.g. H2S, SO2) that reacted with the rock and leached Cu out of the silicates. The coupling between sulfides and LREE in the Type I eclogites, as well as the absence of sulfides and metasomatic features (e.g. unequilibrated grain boundaries, melt pockets, fluid inclusions, phlogopite) in the Type II eclogites, demonstrate that Type II eclogites did not undergo such a metasomatic event and therefore may represent the less-modified protoliths of Type I eclogites.
ISSN: 0009-2541

hal-00903856
https://hal.archives-ouvertes.fr/hal-00903856
DOI : 10.1016/j.chemgeo.2013.06.015

Éditeur(s) : HAL CCSD SpringerOpen
Résumé : The Karakorum Fault zone (KFZ) plays an important role in understanding the formation, evolvement and deformation of the Tibetan Plateau. The high-T dextral shearing metamorphic rocks, e.g., mylonites or mylonitized gneisses-granites, locally crop out along the southeastern part of the KFZ in the Ayila Ri'gyü Range area. The SHRIMP U-Pb dating of the syn-kinematic crystallized zircons indicates that the initial age of the KFZ is ∼27 Ma, ∼10 Ma older than previous results. The extensive high-T dextral shearing along the KFZ started at least at 27–20 Ma, accompanied by the syn-kinematic emplacement of leuco-granites. Deformation and concomitant fluid circulation during shearing most likely occurred as early as at 25–13 Ma. The KFZ probably grew from southeast to northwest along the fault as a result of continuous convergence between the India plate and Eurasia plate.
ISSN: 1001-6538

hal-00406402
https://hal.archives-ouvertes.fr/hal-00406402
DOI : 10.1007/s11434-007-0164-6

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
We present an integrated study of geochemistry, petrofabrics and seismic properties of strongly sheared eclogites from the Chinese Continental Scientific Drilling (CCSD) project in the Sulu ultrahigh-pressure (UHP) metamorphic terrane, eastern China. First, geochemical data characterize diverse protoliths of the studied eclogites. The positive Eu- and Sr-anomalies, negative Nb anomaly and flat portion of heavy rare earth elements in coarse-grained rutile eclogites (samples B270 and B295) suggest a cumulate origin in the continental crust, whereas the negative Nb anomaly and enrichment of light rare earth elements in retrograde eclogites (samples B504, B15 and B19) imply an origin of continental basalts or island arc basalts. Second, P-wave velocities (V-p) of three typical eclogite samples were measured under confining pressures up to 500 MPa and temperatures to 700 degrees C. At 500 MPa and room temperature, the mean V-p reaches 8.50-8.53 km/s in samples B270 and B295 but drops to 7.86 km/s in sample B504, and the P-wave anisotropy changes from 1.7-2.7% to 5.5%, respectively. The pressure and temperature derivatives of V-p are larger in the retrograde eclogite than in fresh ones. Third, the electron backscatter diffraction (EBSD) measurements of the eclogites reveal random crystal preferred orientation (CPO) of garnet and pronounced CPO of omphacite, which is characterized by a strong concentration of [001]-axes sub-parallel to the lineation and of (010)-poles perpendicular to the foliation. The asymmetric CPO of omphacite in sample B270 recorded a top-to-the-south shear event during subduction of the Yangtze plate. The calculated fastest V-p is generally sub-parallel to the lineation, but a different deformation environment during exhumation could form second-order variations in omphacite CPO and affect the V-p distribution in eclogites (e.g., the fastest V-p is at similar to 35 degrees from the foliation in sample 13295). Comparison between measured and calculated seismic properties indicates that the CPO of omphacite controls the seismic anisotropy of eclogites at high pressure, and compositional layering and retrograde minerals will increase the anisotropy. Calculated P-wave velocities agree well with velocities measured at 500 MPa and room temperature for fresh eclogites, but much higher than those of retrograde eclogite. As a case study, the laboratory-derived V-p-P and V-p-T relationships were used to estimate P-wave velocities of eclogites and peridotites beneath the Western Superior Province, Canada. The results indicate that besides the fabric-induced anisotropy, the direction dependence of pressure and temperature derivatives of V-p can significantly increase seismic anisotropy of eclogites with depth, which results in eclogites being an important candidate for the seismic anisotropy in the upper mantle. Due to their very high density and velocity, garnet-rich eclogites within peridotite could be detected in seismic reflections in subduction zones.
ISSN: 0040-1951

hal-00463512
https://hal.archives-ouvertes.fr/hal-00463512
DOI : 10.1016/j.tecto.2008.09.027

Éditeur(s) : HAL CCSD Elsevier
Résumé : Handheld energy dispersive portable X-ray spectrometers (pXRF) are generally designed and used for qualitative survey applications. We developed shipboard quantitative analysis protocols for pXRF and employed the instrument to make over 2000 individual abundance measurements for a selection of major and trace elements on over 1200 m of recovered core during the eight weeks of the International Ocean Discovery Program (IODP) Expedition 352 to the Izu-Bonin forearc. pXRF analytical performance, accuracy and precision were found to be the same on powdered rock samples and on freshly cut rock surfaces, and sample results were similar within error to measurements made via shipboard ICP-OES analysis save at low abundance levels for a few elements. Instrument performance was optimal for elements between Z = 19 and Z = 40, and the system yielded reproducible data for K, Ca, Ti, V, Cr, Mn, Fe, Cu, Zn, Rb, Sr, and Zr on both powdered samples and rock surfaces. Working curves developed via pXRF measurement of a suite of geologic standard reference materials and well-characterized lavas permitted accurate quantitative measurements for many of the examined elements on both sample powders and rock surfaces. Although pXRF has been sporadically employed on previous cruises, Expedition 352 is the first time a detailed, high-density chemostratigraphy of recovered core samples was collected using pXRF measurements of rock core surfaces. These high-resolution data allowed the recognition of chemically distinct eruptive units in near real-time. The rapid identification of geochemical trends vastly improved our selection of samples for shipboard and shore-based analysis, permitted a more comprehensive interpretation of our Expedition results, and provided key decision-making information for drilling operations.
ISSN: 0009-2541

hal-01553188
https://hal.archives-ouvertes.fr/hal-01553188
DOI : 10.1016/j.chemgeo.2017.01.007

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Secondary migration is defined as the movement of hydrocarbons through relatively permeable rocks from source to trap: a two-phase flow within a porous medium. Depending on the geometry and capillary pressure distributions of carrier beds, secondary migration has both vertical and lateral components. The present paper focuses on that part of the migration where the movement is mainly vertical. Its objective is to propose a description of the dynamics governing the vertical part of secondary migration based on the main physical aspects of two-phase flow in a homogeneous porous medium. The study is illustrated by laboratory observations performed in a vertical, 2-D Hele-Shaw cell filled with a transparent porous medium where the flow of dyed oil invading a wetting fluid is visually observed. These observations help us to understand the effect of buoyant, capillary and viscous forces on the resulting flow, the relative importance of which is characterized by non-dimensional numbers. Extrapolating these observations to natural media, it is proposed that vertical secondary migration can be described as a percolation of disconnected and vertically-elongated stringers. These stringers do not move continuously but as a succession of snap-off and re-feeding events which result in a jerky upward movement. Using parameters characterizing the physical properties of the fluid and of the porous medium, the geometry and the dynamic behavior of the stringers are estimated. The width of stringers occurring during secondary migration in geological media is centimetric and their vertical size ranges from several centimeters to a few meters. An upper limit of the mean upward velocity of stringers is proposed, as well as an estimate of their spatial density and of the minimum, average horizontal distance (decametric) between two stringers. The stringers are sparsely distributed, resulting in a low average oil loss and a high efficiency of the vertical migration process.
ISSN: 0264-8172

hal-00831370
https://hal.archives-ouvertes.fr/hal-00831370
https://hal.archives-ouvertes.fr/hal-00831370/document
https://hal.archives-ouvertes.fr/hal-00831370/file/pekins-V-edited.pdf
DOI : 10.1016/j.marpetgeo.2013.04.020

Éditeur(s) : HAL CCSD AGU and the Geochemical Society
Résumé : International audience
How reliable are shear wave splitting measurements as a means of determining mantle flow direction? This remains a topic of debate, especially in the context of subduction. The answer hinges on whether our current understanding of mineral physics provides enough to accurately translate between seismic observations and mantle deformation. Here, we present an integrated model to simulate strain-history-dependent texture development and estimate resulting shear wave splitting in subduction environments. We do this for a mantle flow model that, in its geometry, approximates the double-sided Molucca Sea subduction system in Eastern Indonesia. We test a single-sided and a double-sided subduction case. Results are compared to recent splitting measurements of this region by Di Leo et al. (2012a). The setting lends itself as a case study, because it is fairly young and, therefore, early textures from the slab's descent from the near surface to the bottom of the mantle transition zone--which we simulate in our models--have not yet been overprinted by subsequent continuous steady state flow. Second, it allows us to test the significance of the double-sided geometry, i.e., the need for a rear barrier to achieve trench-parallel subslab mantle flow. We demonstrate that although a barrier amplifies trench-parallel subslab anisotropy due to mantle flow, it is not necessary to produce trench-parallel fast directions per se. In a simple model of A-type olivine lattice-preferred orientation and one-sided subduction, trench-parallel fast directions are produced by a combination of simple shear and extension through compression and pure shear in the subslab mantle.
ISSN: 1525-2027

hal-01053506
https://hal.archives-ouvertes.fr/hal-01053506
DOI : 10.1002/2013GC005032