Éditeur(s) : HAL CCSD Archaeopress
Résumé : International audience
The first formative occupation of the West Indies was by continental populations, moving up from their place of origin in the Orinoco Basin, shortly before our era. In Martinique these groups, attached to the cedrosan saladoid sub-series, have been well studied and for a considerable time. It is upon this work that we have attempted to build an overall analysis of this phase of the prehistory of the Islands. The research drew upon the results of unpublished field work. This led to a more precise understanding of the nature and constitution of these archeological strata and, in turn, of the organisation of the Amerindian villages and their management of the island space. A review of their artisanal production ( ceramics, stone tools, personal adornment) has given us a closer understanding of these populations. It also provides the basis for a future paleo-ethnographic study. Further, an analysis of the origin of the lithic materials has enabled us to place the ancient saladoid occupation of Martinique both in the geography of the West Indian Arc and in the Carribean Basin as a whole. Progressively a picture was thus put together of pioneer agro-ceramicist groups characterised by a high degree of organisation and by the spiritual concepts expressed in their artisanal production.
Les premières occupations formatives des Antilles sont liées à la migration, peu avant le début de notre ère, de populations continentales originaires du bassin de l'Orénoque. En Martinique, l'étude de ces groupes, rattachés à la sous-série saladoïde cedrosane, a une histoire riche et ancienne. C'est fort de ces acquis que nous avons tenté de réaliser une analyse globale de cette phase de la préhistoire des Antilles. Notre recherche s'appuie sur l'analyse des résultats d'un ensemble d'opérations de terrain inédites. Les informations ainsi obtenues nous permettent d'étudier la nature et le mode de constitution de ces gisements archéologiques. On commence alors à distinguer l'organisation de ces villages amérindiens et le mode de gestion de l'espace insulaire qui s'y rattache. L'analyse de différents types de productions artisanales (céramique, outillage en pierre, parure) nous permet d'accéder à une connaissance plus intime de ces populations. Elle offre aussi les moyens nécessaires à la réalisation d'une future étude palethnographique. Par ailleurs, l'analyse de l'origine géographique des matières premières lithiques nous permet de réintégrer l'occupation saladoïde ancienne de la Martinique dans l'espace géographique qui est le sien!: l'arc antillais et plus largement le bassin caraïbe. Ainsi, se dégage progressivement l'image de groupes pionniers agro-céramistes caractérisés par un très haut degré d'organisation et par la matérialisation permanente de leurs conceptions spirituelles au travers de leur production artisanale.
https://hal.univ-antilles.fr/hal-00966882

ISBN : 1 84171 649 9
hal-00966882
https://hal.univ-antilles.fr/hal-00966882

Éditeur(s) : HAL CCSD Oxford University Press (OUP)
Résumé : International audience
OBJECTIVES: Tracheobronchial stenosis (TBS) is noted in 12-23% of patients with granulomatosis with polyangiitis (GPA), and includes subglottic stenosis and bronchial stenosis. We aimed to analyse the endoscopic management of TBS in GPA and to identify factors associated with the efficacy of endoscopic interventions. METHODS: We conducted a French nationwide retrospective study that included 47 patients with GPA-related TBS. RESULTS: Compared with patients without TBS, those with TBS were younger, more frequently female and had less frequent kidney, ocular and gastrointestinal involvement and mononeuritis multiplex. Endoscopic procedures included 137 tracheal and 50 bronchial interventions, mainly endoscopic dilatation, local steroid injection and conservative laser surgery, and less frequently stenting. After the first endoscopic procedure, the cumulative incidence of endoscopic treatment failure was 49% at 1 year, 70% at 2 years and 80% at 5 years. Factors significantly associated with a higher cumulative incidence of treatment failure were a shorter time from GPA diagnosis to endoscopic procedure [hazard ratio (HR) 1.08 (95% CI 1.01, 1.14); P = 0.01] and a bronchial stenosis [HR 1.96 (95% CI 1.28, 3.00); P = 0.002]. A prednisone dose ≥30 mg/day at the time of the procedure was associated with a lower cumulative incidence of treatment failure [HR 0.53 (95% CI 0.31, 0.89); P = 0.02]. CONCLUSION: TBS represents severe and refractory manifestations with a high rate of restenosis. High-dose systemic CSs at the time of the procedure and increased time from GPA diagnosis to bronchoscopic intervention are associated with a better event-free survival. In contrast, bronchial stenoses are associated with a higher rate of restenosis than subglottic stenosis.
ISSN: 1462-0324

hal-01155105
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01155105
DOI : 10.1093/rheumatology/kev129
PUBMED : 26001634

Éditeur(s) : HAL CCSD American Chemical Society
Résumé : 8 pages
International audience
In the protected area of the Cévennes National Park (Southern France), 114 wild brown trout (Salmo trutta fario) were captured at six locations affected to different extents by historical mining and metallurgy dating from the Iron Age to Modern Times. Cadmium and lead in trout livers and muscles reflect high sediment contamination, although an age-related effect was also detected for hepatic metal concentrations. Lead isotope signatures confirm exposure to drainage from mining and metallurgical waste. Developmental instability, assessed by fluctuating asymmetry, is significantly correlated with cadmium and lead concentrations in trout tissues, suggesting that local contamination may have affected fish development. Nowadays, the area is among the least industrialized in France. However, our results show that 60% of the specimens at one site exceed EU maximum allowed cadmium or lead concentration in foodstuffs. The mining heritage should not be neglected when establishing strategies for long-term environmental management.
ISSN: 0013-936X

hal-00621255
https://hal.archives-ouvertes.fr/hal-00621255
DOI : 10.1021/es200755n
PUBMED : 21739978

Éditeur(s) : Ecole Nationale Supérieure Agronomique de Rennes
Résumé : Long-line fishing has been growing on the island of La Réunion since the beginning of the 1990s. The target species is the swordfish (Xiphias gladius), fished mainly in the tropical waters surrounding the island between longitudes 45 degree E and 60 degree E, and latitudes 17 degree S and 27 degree S. From 1998 to 2000, a finalised research programme enabled the collection of precise data concerning the lines' positions and the parameters of the fishing efforts: 3,602 nettings were thus informed by the catches (in numbers of individuals caught) and 12 descriptive variables of the effort. In parallel with this collection effort, satellite maps that described the ocean's landscape of this region of the Indian Ocean exploited by La Réunion's fisheries were made available to sailors and scientists. Extractions from these environmental variables were made at the fishing lines' positions, which allowed us to propose 20 variables describing the environmental conditions of swordfish catches applied to the nettings. In an early part of this study, after a descriptive analysis and a first selection of the variables, we used several GAM (Generalised Additive Models) to model the respective effects of effort and environmental variables on the variability of swordfish catches. We thus highlighted the predominance of factors linked to fishermen (fishing effort) on oceanographic factors in the explanation of this variability. Following these results, a summary on the biology and ecology of the swordfish was proposed in order to draw up hypotheses on the characteristics of this species' population in the Indian Ocean. The aspects linked to the individual behaviour and movements of the population were particularly highlighted. In a latter part of this study and in order to complete the empirical approach by an exploratory constructivist approach, we proposed a modelling tool in order to simulate the possible movements of individuals within the oceanic landscape described by the available satellite maps. After reading in the literature about the various forms of modelling the movements of the large pelagics, we developed an original computer modelling architecture of the multi-agent type that made it possible to manipulate in a dynamic way the satellite maps (and derived products), the individual movements of "animats" whose behaviours were based on this environmental information, and agents that clarify the process of long-line fishing in a geographical way. The computer model that was implemented (MUFINS, for MUlti-Fish INdian ocean Simulator) was next used by calibrating the behaviour of the animats on the real data originally from the analysis of commercial catches proposed in the first part, using robust techniques based on fuzzy logic. The results of the simulations were compared, on the one hand, with the large-scale hypotheses of movement proposed in the first part, and, on the other hand, to swordfish catches both real and corrected for the effect of the fishing effort modelled by the GAM models. Even if the results of these simulations in this study do not allow for proposing convincing interpretations of the underlying processes, the MUFINS tool showed its ability to address questions associated with the swordfish's behaviour in the tropical oceanic landscape and to the effects of scale transfers between the individual level and the collective level. We now envisage its use in a more operational framework, as an interface for dialogue between fishermen and scientists with a goal of sustainable management of the resource.
La peche palangriere s'est developpee a l'ile de La Reunion depuis le debut des annees 1990. L'espece cible est l'espadon (Xiphias gladius), principalement exploite dans les eaux tropicales autour de l'ile entre les longitudes 45 degree E et 60 degree E, et les latitudes 17 degree S et 27 degree S. De 1998 a 2000, un programme de recherche finalisee a permis de collecter des informations precises concernant les positions des lignes et les parametres de l'effort de peche : 3602 filages sont ainsi renseignes par les captures (en nombre d'individus captures) et 12 variables descriptives de l'effort. En parallele de cet effort de collecte, des cartes satellitales ont pu etre mises a la disposition des marins et des scientifiques, decrivant le paysage oceanique de cette region de l'ocean Indien exploitee par la pecherie reunionnaise. Des extractions de ces variables environnementales ont ete effectuees aux positions des lignes de peche, nous permettant de proposer 20 variables descriptives des conditions environnementales de captures d'espadon appliquees aux filages. Dans une premiere partie de ce travail, apres une analyse descriptive et une premiere selection des variables, on a modelise par plusieurs modeles GAM (Generalized Additive Models) les effets respectifs des variables d'effort et des variables environnementales sur la variabilite des captures d'espadon. On a ainsi mis en evidence la predominance des facteurs lies aux pecheurs (effort de peche) sur les facteurs oceanographiques dans le caractere explicatif de cette variabilite. A la suite de ces resultats, une synthese sur la biologie et l'ecologie de l'espadon a ete proposee afin de degager des hypotheses sur les caracteristiques de la population de cette espece dans l'ocean Indien. Les aspects lies au comportement individuel et aux deplacements de la population ont ete particulierement mis en evidence. Dans une deuxieme partie de ce travail et afin de completer l'approche empirique par une approche constructiviste exploratoire, nous avons propose un outil de modelisation afin de simuler les deplacements possibles d'individus au sein du paysage oceanique decrit par les cartes satellitales disponibles. Apres avoir passe en revue dans la litterature les differentes formes de modelisation des deplacements des grands, pelagiques, nous avons developpe une architecture originale de modelisation informatique de type multi-agents permettant de manipuler de maniere dynamique les cartes satellitales (et les produits derives), les mouvements individuels < d'animats >, dont les comportements sont bases sur cette information environnementale, et des agents qui explicitent le processus de capture palangriere de maniere geographique. Le modele informatique ainsi implemente (MUFINS, pour MUlti-Fish INdian ocean Simulator) a ensuite ete utilise en calibrant les comportements des animats sur les donnees reelles issues de l'analyse des captures commerciales proposee en premiere partie, a partir de techniques robustes basee sur la logique floue. Les resultats des simulations ont ete confrontes d'une part aux hypotheses de deplacement a grande echelle proposees en premiere partie, et d'autre part aux captures d'espadon reelles et corrigees de l'effet de l'effort de peche modelise par les modeles GAM. Meme si les resultats de simulations presentes dans ce travail ne permettent pas de proposer d'interpretations convaincantes des processus sous-jacents, l'outil MUFINS a demontre son aptitude a aborder les questions liees au comportement de l'espadon dans le paysage oceanique tropical et aux effets des transferts d'echelle entre le niveau individuel et le niveau collectif. On envisage desormais son utilisation dans un cadre plus operationnel, comme interface de dialogue entre les pecheurs et les scientifiques a des fins de gestion durable de la ressource.

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/2005/these-2592.pdf
http://archimer.ifremer.fr/doc/00000/2592/

Éditeur(s) : Elsevier
Résumé : The "Summer Syndrome", a septicemic vibriosis caused by Vibrio nigripulchritudo, is responsible for one of the two main seasonal mortalities which affect shrimp aquaculture in New Caledonia. It was identified for the first time in December 1997 in an intensive shrimp farm (called farm DF) and has been enzootic ever since. The "Summer syndrome" affects shrimp during warm-season growout. Although the geographic area concerned is limited, it is a potential threat for the industry in that the disease could spread. Analysis of grow out data from 1991 to 2002 in this farm was carried out in order to characterize the disease and the environmental conditions in relation to mortality. Results of farm DF were compared to data from farms not affected by the disease (called farms HC). The "Summer syndrome" occurs during the warm season which is characterized by an increase in water temperature and sunny duration. This disease is characterized by simultaneously highest densities and weakest drying duration between crops in the farms studied. Between 1991 and 2002, the increase of feed input and nitrogen rate in feed has led to a significant increase of the growth rate over the years in farm DF. At the same time, water management has not changed and has induced an increase in environmental waste production. In consequence, an early eutrophication of water is observed, which is concomitant with the beginning of the mortality outbreaks. This could play a role by inducing directly or indirectly a stress for shrimp and/or a growth and/or virulence factors of the pathogen.
Aquaculture (0044-8486) (Elsevier), 2006-08 , Vol. 261 , N. 3 , P. 1039-1047

Droits : 2006 Elsevier
http://archimer.ifremer.fr/doc/2006/publication-1868.pdf
DOI:10.1016/j.aquaculture.2006.08.036
http://archimer.ifremer.fr/doc/00000/1868/

Éditeur(s) : Springer
Résumé : Two recurring syndromes threaten the viability of the shrimp industry in New Caledonia, which represents the second largest export business. The "Syndrome 93" is a cold season disease due to Vibrio penaeicida affecting all shrimp farms, while the "Summer Syndrome" is a geographically restricted vibriosis caused by a virulent lineage of Vibrio nigripulchritudo. Microbiological procedures for diagnosis of these diseases are time-consuming and do not have the ability to discriminate the range of virulence potentials of V. nigripulchritudo. In this study, we developed a multiplex PCR method to simultaneously detect these two bacterial species and allow for pathotype discrimination. The detection limits of this assay, that includes an internal amplification control to eliminate any false-negative results, were determined at 10 pg purified DNA and 200 cfu/ml. After confirming the effectiveness of our method using experimentally infected animals, its accuracy was compared to standard biochemical methods during a field survey using 94 samples collected over 3 years from shrimp farms encountering mortality events. The multiplex PCR showed very high specificity for the detection of V. penaeicida and V. nigripulchritudo (inclusivity and exclusivity 100%) and allowed us to detect the spreading of highly pathogenic isolates of V. nigripulchritudo to a farm adjoining the "Summer Syndrome area." This assay represents a simple, rapid, and cost-effective diagnostic tool for implementing timely risk management decisions but also understanding the seasonal and geographical distribution of these pathogens.
Microbial Ecology (0095-3628) (Springer), 2012-01 , Vol. 63 , N. 1 , P. 127-138

Droits : Springer Science+Business Media, LLC 2011
http://archimer.ifremer.fr/doc/00063/17398/15169.pdf
DOI:10.1007/s00248-011-9951-3
http://archimer.ifremer.fr/doc/00063/17398/

Éditeur(s) : HAL CCSD PeerJ
Résumé : International audience
The tiger shark Galeocerdo cuvier (Carcharhinidae) is a large elasmobranch suspected to have, as other apex predators, a keystone function in marine ecosystems and is currently considered Near Threatened (Red list IUCN). Knowledge on its ecology, which is crucial to design proper conservation and management plans, is very scarce. Here we describe the isolation of eight polymorphic microsatellite loci using 454 GS-FLX Titanium pyrosequencing of enriched DNA libraries. Their characteristics were tested on a population of tiger shark (n = 101) from Reunion Island (SouthWestern Indian Ocean). All loci were polymorphic with a number of alleles ranging from two to eight. No null alleles were detected and no linkage disequilibrium was detected after Bonferroni correction. Observed and expected heterozygosities ranged from 0.03 to 0.76 and from 0.03 to 0.77, respectively. No locus deviated from Hardy-Weinberg equilibrium and the global F IS of the population was of 0.04 NS. Some of the eight loci developed here successfully cross-amplified in the bull shark Carcharhinus leucas (one locus), the spinner shark Carcharhinus brevipinna (four loci), the sandbar shark Carcharhinus plumbeus (five loci) and the scalloped hammerhead shark Sphyrna lewini (two loci). We also designed primers to amplify and sequence a mitochondrial marker, the control region. We sequenced 862 bp and found a low genetic diversity, with four polymorphic sites, a haplotype diversity of 0.15 and a nucleotide diversity of 2 × 10 −4 .
ISSN: 2167-8359

hal-01317961
https://hal.archives-ouvertes.fr/hal-01317961
https://hal.archives-ouvertes.fr/hal-01317961/document
https://hal.archives-ouvertes.fr/hal-01317961/file/Pirog_2016PeerJ_microsat_tiger_shark.pdf
DOI : 10.7717/peerj.2041

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Ecological signs of Earth's biosphere forewarn an alarming trajectory towards a global mass-extinction. Assessing species performance and susceptibilities to decline is essential to comprehend and reverse this trend. Yet it is challenging, given difficulties associated with quantifying individual and population processes that are variable across time, space, and life-stages. We describe a new approach to estimating and comparing species performances that combines empirical data, a novel theoretical consideration of population dynamics, and modern statistics. Our approach allows for a more realistic continuous representation of individual performances along development stages while taking into account non-linearity, and natural variability as captured by spatio-temporally replicated observations. We illustrate its application in a coral meta-assemblage composed of populations of the three major reef-building taxa Acropora, Pocillopora, Porites. Using a unique set of highly replicated observations of individual coral dynamics under various environmental conditions, we show how taxa differ in their investment in recruitment and size-specific aptitude for growth and survival, notably through different use of clonal shrinkage, fragmentation, fission, and fusion processes. Our results reveal contrasting life-history trade-offs among taxa which, along with differing patterns of density-dependent recruitment, modulate species responses to decline. These differences in coral life history traits reflect opposing life-strategies, imply regulation at differing life-stages, and explain divergence in species trajectories. Our findings indicate a high potential for resilience in Pocillopora and Porites populations, thanks respectively to a sustained recruitment that promotes demographic elasticity through replacement of individuals, and a steady resistance to mortality which confers persistence through lingering of individuals. Resilience in Acropora appears more arbitrary, given high susceptibility to perturbations and dependency of recruitment on presence of established local populations. We identify management actions that can complement Acropora's life history and benefit recovery of its populations following mortality events. Our regression-modelling approach to quantifying and comparing species performances in different population processes is applicable to all taxa, as illustrated even those with complex clonal life histories, and can be implemented at wide spatio-temporal and taxonomic coverage. It can promote more accurate representation of species dynamics in both descriptive and predictive modelling approaches. The semi-parametric contrast curve method we develop facilitates comparing response variables along continuous explicative metrics while accounting for multiple sources of complexity in empirical data. It should widely benefit investigations in ecology and quantitative science.
ISSN: 1476-945X

hal-01212337
https://hal-univ-perp.archives-ouvertes.fr/hal-01212337
DOI : 10.1016/j.ecocom.2015.07.003

Éditeur(s) : HAL CCSD BioMed Central
Résumé : International audience
An important objective on diagnosis of patients with Langerhans cell histiocytosis (LCH) is to determine the extent of disease. However, whether systematic extrathoracic investigation is needed in adult patients with clinically isolated pulmonary LCH (PLCH) has not been evaluated
ISSN: 1750-1172

hal-01269910
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01269910
DOI : 10.1186/s13023-016-0387-1
PUBMED : 26833097

Éditeur(s) : Université des Antilles Études caribéennes
Résumé : This article considers economic risks which could potentially threaten the competitiveness and sustainability of cruise destinations such as New Zealand. Included in this article are those economic risks which are factored into cruise lines’ decisions as to whether to send their ships to a destination and the destination’s capacity to host these ships and their passengers. A cruise life-cycle framework has been developed to provide a structure for discussion: (a) product development; (b) infrastructure development; (c) distribution; (d) consumption; and (e) disposal. Five strategies for managing economic risks are presented: the formation of an adequately funded peak committee; the cultivation of a cruise culture; the provision of appropriate training; the creation of a national cruise manual; and the design, development and implementation of a cruise brand. Each of these strategies is based on an approach to risk management which calls for a positive view of risk and how it can be transformed into competitive success.
Cet article examine les risques économiques qui pourraient potentiellement menacer la compétitivité et la durabilité des destinations de croisière telle que la Nouvelle-Zélande. Les risques économiques inclus dans cet article relèvent des décisions compagnies de croisières que d'envoyer ou non leurs navires vers une destination et la capacité de la destination pour accueillir ces navires et leurs passagers. Un cadrage du cycle de vie de la croisière a été établi pour fournir de base de discussion: le développement de produits (a), le développement des infrastructures (b), la distribution(c) ; la consommation(d), et l'élimination(e). Cinq stratégies pour gérer les risques économiques sont présentées : la formation d'un comité de financement de pointe adéquat, le développement d'une culture de la croisière, la fourniture d'une formation appropriée, la création d'un manuel de croisière nationale et la conception, le développement et la mise en œuvre d'une marque « croisière ». Chacune de ces stratégies repose sur une approche de gestion des risques qui appelle à une vision positive du risque et de la façon dont il peut être appréhendé avec succès dans la compétition.
Nouvelle-Zélande

Droits : info:eu-repo/semantics/openAccess
urn:doi:10.4000/etudescaribeennes.5134
http://journals.openedition.org/etudescaribeennes/5134

Résumé : In an effort to implement new fishing activities for the small scale fisheries of Reunion Island, a prospecting cruise targeting deep demersal fish (200 to 600 m) was set up on the west coast of Reunion Island in 2000. This project was carried out by the Regional Fishery Committee and the French Institute for the Exploration of the Sea (Ifremer). Large commercial stocks were identified, and numerous professional or recreational fishermen started employing electric winches to exploit these deep resources. However, the deep demersal species are a fragile resource due mainly to low growth rates and late sexual maturation. Due to the rapid increase in fishing pressure, Ifremer was asked to set up a new study and two scientific campaigns were carried out in 2011 (68 fishing trips being conducted with 559 dropline operations). The first cruise was conducted at the same sites, using the same types of fishing gear and methods used in 2000. A marked drop of greater than 90% was observed in the catches of commercial species, together with a decrease of most fish sizes, attesting the overexploitation of these stocks. Only, catches of the small non-commercial shark (Squalus megalops) remained important (50% in number and weight of total catches). The second cruise extended the prospection area to all waters surrounding Reunion Island . The overexploitation was confirmed in the west of Reunion Island, and in to a lesser degree in the north. Yields were better along the east and the south coasts. Concurrently, the efficiency of 2 hook sizes was compared : small hooks caught significantly more fish but of significantly smaller body sizes, resulting in comparable total weight of fish. We conclude that medium size hooks (i.e. type 7/0) have a significant selectivity on the fish size without loss in the global catch yield. Various types of baits were also tested with the flesh of small local pelagic fish species (Selar crumenophtalmus and Decapterus macarellus) appearing to be the most efficient. This study provides helpful indicators for the management of demersal fish stocks in Reunion island, which have been poorly surveyed and poorly regulated until now. However, the total fishing effort, especially from recreational fishermen, remains the most important factor to be quantified.
Dans la perspective de diversifier la Petite Pêche réunionnaise, une campagne de prospection des stocks de poissons démersaux profonds (200 à 600 m) avait été réalisée en 2000 par le Comité Régional des Pêches Maritimes (CRPM) et l'Institut Français de Recherche pour L'Exploitation de la Mer (Ifremer) dans l'ouest de l'île de La Réunion. Elle a montré l'existence de stocks commercialement intéressants et de nombreux pêcheurs, professionnels et plaisanciers se sont équipés en moulinets électriques pour exploiter ces ressources profondes. Cependant les poissons démersaux profonds représentent une ressource fragile du fait, notamment, de leur croissance lente et de leur maturité sexuelle tardive. Aussi, face à cette augmentation rapide de la pression de pêche, Ifremer a été sollicité pour mener une nouvelle étude ; et deux nouvelles campagnes expérimentales ont été réalisées en 2011 (68 marées ayant permis la réalisation de 559 filages). La première campagne a repris les mêmes sites de pêche, le même matériel et la même méthodologie qu’en 2000. Elle montre que les rendements en espèces commerciales ont diminué de façon très nette (plus de 90%) ainsi que la taille de certaines espèces, indicateurs caractéristiques d'une surexploitation des stocks. Seules les captures de requins zépines (Squalus megalops,) non commercialisées à La Réunion, restent comparables à celles de 2000 avec la moitié des captures totales. La 2e campagne a étendu la prospection à tout le tour de l'île. La surpêche (baisse des rendements et des tailles de poisson) est confirmée dans l'ouest et à un moindre degré sur la côte nord. Les rendements sont meilleurs dans l'est et le sud. Parallèlement, 2 tailles d'hameçons ont été comparées : les petits hameçons capturent un nombre significativement plus élevé de poissons par filage, mais de tailles plus petites, ce qui se traduit par un poids global comparable. Les hameçons de taille moyenne (type 7/0) ont donc une sélectivité significative sur la taille des poissons capturés sans nuire au rendement global. Des comparaisons ont aussi porté sur les types d'appât : Les laizes de petits pélagiques locaux (pêche-cavale et bancloche) se révèlent les plus efficaces et les plus sélectives vis-à-vis des espèces commerciales. Cette étude fournit des indicateurs utiles à la gestion des stocks démersaux jusqu'ici peu étudiés et peu encadrés. Mais la grande inconnue reste l'effort de pêche total sur cette ressource et notamment celui des pêcheurs plaisanciers.

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/00098/20902/18837.pdf
DOI:10.13155/20902
http://archimer.ifremer.fr/doc/00098/20902/

Éditeur(s) : Littoral 2004, Aberdeen, Scotland, UK, September 2004
Résumé : NAMIBIE (a french acronym for Integrated Multimedia Navigator Within Coastal Environment Data Bases) is a specific tool which first concept has been established by Ifremer and has been developped by an association between research in the field of coastal environment, innovation in the field of new information and communication technologies and services in the field of coastal integrated management and impact studies. The objectives of this tool are to facilitate research, direct access and display of relevant multimedia coastal integrated data and information according to an interactive, widely opened and playfull interface. The principles are based upon the fact that sustainable decision making needs an optimized unterstanding of coastal processes and better consultation between actors. In this purpose the development of the tool has considered that the end-user should and could be free to look after the data and the information he needs for a particular site or environment of interest and for a specific ICZM question according to easy navigation interfaces. That is why NAMIBIE concept is based upon : - a coherent 3D representation of the coasts (i.e. from catchement areas to continental shelf and deep sea), which considers a coherent DEM from land to sea and textural representation of the environment using satellite imagery textural displays, - a 3D navigator which allows the user to fly or dive over and within the coastal environment of interest, - a multimedia database (text, graphs, image, maps, geographic objects, modelling results...) specific to the territory of interest, - an interactive interface which helps in finding relevant information associated to specific questions. The technologies used include VRML data format, integration of standard GIS format (shp, grid, img) within the navigator, integration and display of modelling data. The production chain is realized in C++ and Java scripts allow dialogue between web pages and 3D windows. Applications are presented on the coasts of Languedoc Roussillon region (French Mediterranean border) in the framework of ICZM problematics

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/00089/20055/17696.pdf
http://archimer.ifremer.fr/doc/00089/20055/

Éditeur(s) : Academic Press Ltd- Elsevier Science Ltd
Résumé : Bonamiosis due to the parasite Bonamia ostreae has been associated with massive mortality in flat oyster stocks in Europe. Control of the disease currently relies on disease management practices and transfer restriction. Previously, massal selections based on survival to challenge to infection with B. ostreae have been applied to produce flat oyster families with resistant progeny. In an attempt to understand the molecular mechanisms involved in disease resistance, differentially expressed sequence tags between resistant and wild Ostrea edulis haemocytes, both infected with the parasite, were identified using suppression subtractive hybridisation. Expression of seven ESTs has been studied using quantitative reverse-transcriptase PCR. The base-line expression of an extracellular superoxide dismutase, inhibitor of apoptosis (OeIAP), Fas ligand (OeFas-ligand) and Cathepsin B was significantly increased, whilst cyclophilin B appeared significantly decreased in resistant oysters. Considering their great interest for further studies, the open reading frames of the OeFas-ligand and OeIAP were completely sequenced. Highlights ► Bonamia ostreae is an intra-haemocytes parasite. ► Flat oyster Ostrea edulis, is the natural host of B. ostreae. ► In this study we have studied genes expressed in response to the parasite. ► Extracellular superoxide dismutase (OeEcSOD) is up regulated in resistant haemocyte. ► Genes involved in apoptosis is up regulated in resistant haemocytes from flat oyster.
Fish & Shellfish Immunology (1050-4648) (Academic Press Ltd- Elsevier Science Ltd), 2012-06 , Vol. 32 , N. 6 , P. 958-968

Droits : 2012 Elsevier Ltd. All rights reserved.
http://archimer.ifremer.fr/doc/00071/18218/15790.pdf
DOI:10.1016/j.fsi.2012.01.026
http://archimer.ifremer.fr/doc/00071/18218/

Éditeur(s) : Université des Antilles Études caribéennes
Résumé : Les îles de la Caraïbe orientale sont particulièrement exposées aux éruptions volcaniques. L’ensemble des Petites Antilles comprend en effet une vingtaine de volcans actifs, aux styles éruptifs parmi les plus dangereux et destructeurs. La définition de facteurs de vulnérabilité autorise des comparaisons et un classement des îles en fonction de leur niveau d’exposition. Cette approche permet d’attirer l’attention sur la nécessité d’une gestion proactive des risques volcaniques en contexte insulaire.
The Eastern Caribbean islands are particularly exposed to volcanic eruptions. The Lesser Antilles arc indeed includes a score of active volcanoes, whose eruptive styles are among the most dangerous and destructive. The definition of vulnerability factors leads to some comparisons and a classification of the islands according to their level of exposure. This approach draws the attention to the imperative need for a proactive management of the volcanic risks in this insular context.
Caraïbes

Droits : info:eu-repo/semantics/openAccess
urn:doi:10.4000/etudescaribeennes.316
http://journals.openedition.org/etudescaribeennes/316

Éditeur(s) : Université des Antilles Études caribéennes
Résumé : It is increasingly recognized that maintaining biodiversity is of fundamental importance toward sustaining human livelihoods. One of the major assets of the region identified as “Latin America and the Caribbean” (LAC) is its biological wealth; by extension, the continued biodiversity loss of the LAC region is seen as one of the world’s principal environmental problems. The marine resources of Caribbean Sea are of vital economic, ecological and social importance to the LAC region, and are under particular threat. Marine turtles play vital roles throughout the Caribbean Sea both in terms of ecological functions and human welfare. Conservation efforts in this direction can often depend on the ability to place a value on welfare changes associated with the loss of ecosystem goods and services into which biodiversity plays an integral role.Using the ecosystem service categories of the Millennium Ecosystem Assessment, this paper discusses from an inter-disciplinary perspective the methodologies associated with linking marine turtles, ecosystem services and human welfare. While the main economic benefit to be currently valued may stem from the eco-tourism potential surrounding turtle nesting sites, for a true picture of the environmental resources upon which this service depends, it is necessary to also identify the other provisioning, regulating and cultural services of the resource. In this way, human welfare impacts can be more truly judged, and effective resource management can be undertaken.
La préservation de la biodiversité est d'une importance fondamentale pour le maintien des moyens de subsistance de l'homme. L'un des atouts majeurs de l’ensemble régional que constitue l'Amérique latine et les Caraïbes (LAC) demeure sa richesse biologique, par extension, toute dégradation de sa biodiversité pose des problèmes environnementaux d’ordre mondial. Les ressources marines de la mer des Caraïbes, qui sont particulièrement menacées, sont d'une importance économique, écologique et sociale vitale pour la région. Les tortues marines jouent un rôle essentiel dans la mer des Caraïbes à la fois en termes de fonctions écologiques et de bien-être humain.En ce sens, les efforts de conservation peuvent de la capacité de chiffrer la valeur sur le bien-être des changements associés à la perte de biens et de services des écosystèmes dans lesquels la biodiversité est partie intégrante. En utilisant les catégories de services des écosystèmes du Millennium Ecosystem Assessment, la présente étude aborde, dans une perspective interdisciplinaire, les méthodologies associées aux interrelations entre les tortues marines, les services écosystémiques et le bien-être de l'homme.Si le principal avantage économique actuellement identifié repose sur le potentiel écotouristique, autour des sites de nidification des tortues, pour une image fidèle des ressources environnementales sur lesquelles ce service repose, il est nécessaire d'identifier également les autres apports de la ressource, en termes de régulations, de services culturels. De cette façon, les impacts sur le bien-être humain peuvent être mieux appréhendés et les ressources peuvent être gérées de façon plus efficace.
Caraïbes

Droits : info:eu-repo/semantics/openAccess
urn:doi:10.4000/etudescaribeennes.10990
http://journals.openedition.org/etudescaribeennes/10990

Éditeur(s) : Communication, ICES Conference and Meeting (CM), 2010, Nantes
Résumé : Chlordecone is a very persistent insecticide used in banana plantations of the French West Indies between 1972 and 1993. Chlordecone residues were found in inland water, in agricultural and freshwater products, and in marine organisms. This pollution has become of great concern in 2007. Therefore, a governmental action Plan was launched to better assess the pollution and to improve the consumer’s protection. Within this plan, 1048 samples from 69 different species of marine fishes and crustaceans were collected all around both the Guadeloupe and the Martinique Islands and analyzed. The results confirm the presence of chlordecone in marine organisms, with highly variable concentrations (from the detection limit to 1000 μg.kg-1). In 17.9 % of the samples, concentrations exceeded 20 μg.kg-1, the maximum acceptable level in fish according to the French regulation (Anon, 2008). Two main features of this contamination were characterized. 1) Because of the sedimentation of contaminated suspended soil particles, the sheltered bays are more exposed to chlordecone than the open coast where terrigenous flux are dispersed. 2) Species biology, particularly their lifestyle and diet, appear to influence contamination levels. Thus, the more contaminated species live in relation with sediment or are at high trophic level. These results have directly supported political decisions in order to prevent too high exposure of consumers to chlordecone. Fishing activities in sheltered bays have been forbidden for potentially highly contaminated species like benthic crustaceans and top predators. Further studies are under way to assess the importance of the trophic transport of chlordecone within the foodweb, and to evaluate the historical deposition of this insecticide in sediment and its further bioavailability.

Droits : 2010 ICES/CIEM ; Ifremer
http://archimer.ifremer.fr/doc/00014/12511/9361.pdf
http://archimer.ifremer.fr/doc/00014/12511/

Éditeur(s) : Proceedings of 3rd East-West Fisheries conference; 24-26 Nov. 1998; Copenhagen, Denmark
Résumé : The demand for fish products, from freshwater and from the sea, is globally increasing ail over the world. This major trend can be explained by the development of mankind, not only in quantity (one billion people more in the last 15 years) but also because food consumption habits are changing: for southern countries, fish products consumption is first a diversification of protein sources. For northern countries, it is a new style of eating with diet, tasteful and original products coming from the attractive « new frontier » symbolised by the sea. Global/y speaking, the aquatic product consumption raised from 9 to 13 kg./unhab./year during the last 30 years. It is now clear that catches from ail fisheries cannot match this steady increase of the demand as data collected from al/ countries reveal the stagnation of the world production since the beginning of the nineties. The reasons are now well-known: over-capacity of fishing fleets, over-fishing of many stocks, poor management of harvested species which results in about 20 millions of tons of waste while the same amount is processed into fishmeal and oil, out of direct human consumption.

Droits : Ifremer
http://archimer.ifremer.fr/doc/00041/15181/12518.pdf
http://archimer.ifremer.fr/doc/00041/15181/

Éditeur(s) : Université des Antilles Études caribéennes
Résumé : Les Parcs Naturels Régionaux (PNR) français créés en 1967 constituent de véritables laboratoires pour la mise en œuvre d’un développement durable avant la lettre. Ils ont expérimenté diverses initiatives visant à valoriser la conservation des patrimoines naturel et culturel de leur territoire, notamment une politique de marquage de produits et de services territorialement ancrés. Dans cet article, nous nous interrogeons sur la pertinence de ces instruments de développement local pour les territoires insulaires à partir de l’exemple de la politique de marquage mise en œuvre par le PNR de la Martinique. Nous intéressant plus particulièrement aux impacts des démarches de marquage en termes de dynamique d’action collective, nous centrons notre analyse sur la dimension « sociale » de la durabilité.
French Regional Nature Parks (RNP), created in 1967, can be considered as precursory sustainable development laboratories. Different initiatives dedicated to promote local development and draw benefits from the improved status of sustainably managed areas have been implemented in the RNP and among them a labelling policy through the development of RNP collective trademarks. In this article, we wonder about the consistency of this RNP labelling policy for the French overseas department of Martinique. According to our analytical references (local governance and collective action), we focus on the social dimension of sustainable development.

Droits : info:eu-repo/semantics/openAccess
urn:doi:10.4000/etudescaribeennes.3460
http://journals.openedition.org/etudescaribeennes/3460

Éditeur(s) : HAL CCSD Wiley
Résumé : Outcrossing rates, pollen dispersal and male mating success were assessed in Dicorynia guianensis Amshoff, a neotropical tree endemic to the Guiana shield. All adult trees within a continuous area of 40 ha (n = 157) were mapped, and were genotyped with six microsatellite loci. In addition, progenies were genotyped from 22 mature trees. At the population level, the species was mostly outcrossing (tm = 0.89) but there was marked variation among individuals. One tree exhibited mixed mating, confirming earlier results obtained with isozymes that D. guianensis can tolerate selfing. A Bayesian extension of the fractional paternity method was used for paternity analysis, and was compared with the neighbourhood method used widely for forest trees. Both methods indicated that pollen dispersal was only weakly related to distance between trees within the study area, and that the majority (62%) of pollen came from outside the study stand. Using maximum likelihood, male potential population size was estimated to be 1119, corresponding to a neighbourhood size of 560 hectares. Male mating success was, however, related to the diameter of the stem and to flowering intensity assessed visually. The mating behaviour of D. guianensis is a combination of long-distance pollen flow and occasional selfing. The species can still reproduce when it is extremely rare, either by selfing or by dispersing pollen at long distances. These results, together with the observation that male mating success was correlated with the size of the trees, could be implemented in management procedures aiming at regenerating the species
ISSN: 0962-1083

hal-01032227
https://hal.archives-ouvertes.fr/hal-01032227
DOI : 10.1111/j.1365-294X.2004.02127.x

Éditeur(s) : Elsevier Science Bv
Résumé : Underwater video techniques are increasingly used in marine ecology studies. Technological progress regarding video cameras, sensors (such as sounders), battery life and information storage make these techniques now accessible to a majority of users. However, diver-based underwater visual censuses, and catch and effort data, remain the most commonly used for observing coastal biodiversity and species. In this paper, we review the underwater video techniques that have been developed since the 1950s to investigate and/or monitor coastal biodiversity. Techniques such as remote underwater video, whether baited or not, diver-operated video and towed video are described, along with corresponding applications in the field. We then analyse the complementary of techniques, first from studies comparing video techniques with other observation techniques, whether video-based or not, and second by documenting their respective cost efficiencies. These findings are discussed with respect to current challenges in monitoring and investigating coastal biodiversity. Video should be more often considered and used, either in addition to or as an alternative to diver-based, fishing and acoustic techniques, as it may be particularly suited for monitoring coastal biodiversity in a variety of areas and on larger scales than hitherto and within an ecosystem-based approach to management and conservation.
Fisheries Research (0165-7836) (Elsevier Science Bv), 2014-06 , Vol. 154 , P. 44-62

Droits : 2014 Elsevier B.V. All rights reserved.
http://archimer.ifremer.fr/doc/00181/29274/27901.pdf
DOI:10.1016/j.fishres.2014.01.019
http://archimer.ifremer.fr/doc/00181/29274/