Éditeur(s) : HAL CCSD Springer
Résumé : International audience
Centropyge bispinosa is one of the most frequently coral reef fish exported through the aquarium trade. We developed fifteen microsatellite markers to evaluate possible distinct breeding stocks throughout its Indo-Pacific distribution range. Number of alleles varied from 2 to 50 per locus, observed and expected heterozygosities ranged from 0.486 to 0.953 and 0.482 to 0.974 respectively. Significant deviations from HWE were detected in two loci. Cross-amplifications were tested in four congener species: C. loriculus, C. bicolor, C. flavissima and C. vroliki. The 15 new microsatellite loci will be helpful tools for the identification of breeding units, connectivity studies, as well as phylogenetic relationships among pygmy angelfishes.
ISSN: 1877-7252

hal-01341716
https://hal-univ-perp.archives-ouvertes.fr/hal-01341716
DOI : 10.1007/s12686-014-0363-9

Éditeur(s) : HAL CCSD
Résumé : International audience
The presence of photosynthetic zooxanthellae (dinoflagellates) in the tissue of many cnidarians is the main reason for their ecological success (i.e. coral reefs). It could also be the main cause of their demise, as the worldwide bleaching of reef-building coral is nothing less than the breakdown of this symbiotic association. The stability of this relationship is the principal marker for the biomonitoring of cnidarian health. We have therefore developed a new, simple method to isolate zooxanthellae in a few steps using NaOH solution. The protocol was validated in three symbiotic cnidarian species: a sea anemone, a gorgonian and a coral. Our method allows the isolation of intact and viable zooxanthellae with better yields than classic methods, especially for species with a calcareous skeleton. Moreover, the isolated zooxanthellae were free of host nucleic contaminants, facilitating subsequent specific molecular analyses.
Journal of Experimental Biology

hal-01546180
https://hal.archives-ouvertes.fr/hal-01546180
DOI : 10.1242/jeb.074955

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : The core structures of dislocations in diopside have been calculated within the Peierls model, which assumes a planar core. 1/2 < 110 > dislocations can dissociate into two collinear partial dislocations. We show that [001] glide is very difficult in (010) and that a non-collinear dissociation of [001](100) (modelled within a Peierls-Nabarro-Galerkin approach) makes glide equally easy in (100) and {110}. A widely spread core structure corresponding to a low lattice friction has been found for [100](010) and [010](100) dislocations which is not supported by mechanical data and, together with TEM observations, suggests that another, probably non-planar core structure is possible for these dislocations.
ISSN: 0342-1791

hal-00558238
https://hal.archives-ouvertes.fr/hal-00558238
DOI : 10.1007/s00269-010-0370-7

Éditeur(s) : HAL CCSD Wiley
Résumé : International audience
Well-designed and effectively managed networks of marine reserves can be effective tools for both fisheries management and biodiversity conservation. Connectivity, the demographic linking of local populations through the dispersal of individuals as larvae, juveniles or adults, is a key ecological factor to consider in marine reserve design, since it has important implications for the persistence of metapopulations and their recovery from disturbance. For marine reserves to protect biodiversity and enhance populations of species in fished areas, they must be able to sustain focal species (particularly fishery species) within their boundaries, and be spaced such that they can function as mutually replenishing networks whilst providing recruitment subsidies to fished areas. Thus the configuration (size, spacing and location) of individual reserves within a network should be informed by larval dispersal and movement patterns of the species for which protection is required. In the past, empirical data regarding larval dispersal and movement patterns of adults and juveniles of many tropical marine species have been unavailable or inaccessible to practitioners responsible for marine reserve design. Recent empirical studies using new technologies have also provided fresh insights into movement patterns of many species and redefined our understanding of connectivity among populations through larval dispersal. Our review of movement patterns of 34 families (210 species) of coral reef fishes demonstrates that movement patterns (home ranges, ontogenetic shifts and spawning migrations) vary among and within species, and are influenced by a range of factors (e.g. size, sex, behaviour, density, habitat characteristics, season, tide and time of day). Some species move <0.1–0.5 km (e.g. damselfishes, butterflyfishes and angelfishes), <0.5–3 km (e.g. most parrotfishes, goatfishes and surgeonfishes) or 3–10 km (e.g. large parrotfishes and wrasses), while others move tens to hundreds (e.g. some groupers, emperors, snappers and jacks) or thousands of kilometres (e.g. some sharks and tuna). Larval dispersal distances tend to be <5–15 km, and self-recruitment is common. Synthesising this information allows us, for the first time, to provide species, specific advice on the size, spacing and location of marine reserves in tropical marine ecosystems to maximise benefits for conservation and fisheries management for a range of taxa. We recommend that: (i) marine reserves should be more than twice the size of the home range of focal species (in all directions), thus marine reserves of various sizes will be required depending on which species require protection, how far they move, and if other effective protection is in place outside reserves; (ii) reserve spacing should be <15 km, with smaller reserves spaced more closely; and (iii) marine reserves should include habitats that are critical to the life history of focal species (e.g. home ranges, nursery grounds, migration corridors and spawning aggregations), and be located to accommodate movement patterns among these. We also provide practical advice for practitioners on how to use this information to design, evaluate and monitor the effectiveness of marine reserve networks within broader ecological, socioeconomic and management contexts.
ISSN: 1464-7931

Droits : http://creativecommons.org/licenses/by-nc-nd/
hal-01334353
https://hal-univ-perp.archives-ouvertes.fr/hal-01334353
https://hal-univ-perp.archives-ouvertes.fr/hal-01334353/document
https://hal-univ-perp.archives-ouvertes.fr/hal-01334353/file/Green_et_al-2015-Biological_Reviews.pdf
DOI : 10.1111/brv.12155

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Despite the importance of invertebrate resources for Pacific coral reef islands, few studies have specifically addressed the effects of harvesting on invertebrate assemblages including targeted and non-targeted species. The impacts of recreational harvesting on reef and seagrass invertebrate assemblages in New Caledonia (South Pacific) are investigated by comparing communities in non-MPA and MPA areas. Sampling was done using a standard core method on seagrasses and by visual survey along belt transects on reefs. A total of 371 species were recorded, 174 on seagrasses and 254 on reefs, with 57 common species. Reef and seagrass invertebrate communities were very different in MPA and non-MPA areas. On both habitats, MPAs were identified as undisturbed areas while non-MPAs were defined as moderately disturbed with a predominance of small-sized and opportunistic species. Fishing not only affects target species but also non-target species through secondary effects. These results highlight the necessity of a community based approach for the conservation of resources in tropical poorly known environments.
ISSN: 0165-7836

hal-01311486
http://hal.univ-reunion.fr/hal-01311486
http://hal.univ-reunion.fr/hal-01311486/document
http://hal.univ-reunion.fr/hal-01311486/file/Harvesting%20effects%20on%20tropical%20invertebrate%20assemblages%20in%20New_hal.pdf
DOI : 10.1016/j.fishres.2015.02.001

Éditeur(s) : Copernicus Gesellschaft Mbh
Résumé : During the GWADASEIS cruise (Lesser Antilles volcanic arc, February-March 2009) a very high resolution (VHR) seismic-reflection survey was performed in order to constrain Late Quaternary to Present faulting. The profiles we obtained evidence frequent "ponding" of reworked sediments in the deepest areas, similar to the deposition of Mediterranean "homogenites". These bodies are acoustically transparent (few ms t.w.t. thick) and are often deposited on the hanging walls of dominantly normal faults, at the base of scarps. Their thickness appears sufficient to compensate (i.e. bury) co-seismic scarps between successive earthquakes, resulting in a flat and horizontal sea floor through time. In a selected area (offshore Montserrat and Nevis islands), piston coring (4 to 7m long) was dedicated to a sedimentological analysis of the most recent of these particular layers. It corresponds to non-stratified homogenous calcareous silty sand (reworked calcareous plankton and minor volcanoclastics). This layer can be up to 2 m thick, and overlies fine-grained hemipelagites. The upper centimeters of the latter represent the normal RedOx water/sediment interface. Pb-210 and Cs-137 activities lack in the massive sands, while a normal profile of unsupported Pb-210 decrease is observed in the hemipelagite below, together with a Cs-137 peak corresponding to the Atmospheric Nuclear Experiments (1962). The RedOx level was thus capped by a recent instantaneous major sedimentary event considered as post-1970 AD; candidate seismic events to explain this sedimentary deposits are either the 16 March 1985 earthquake or the 8 October 1974 one (M-w = 6.3 and M-w = 7.4, respectively). This leads to consider that the syntectonic sedimentation in this area is not continuous but results from accumulation of thick homogenites deposited after the earthquakes (as observed in the following weeks after Haiti January 2010 event, McHugh et al., 2011). The existence of such deposits suggests that, in the area of study, vertical throw likely results from cumulated effects of separated earthquakes rather than from aseismic creep. Examination of VHR profiles shows that all major co-seismic offsets are recorded in the fault growth sequence and that co-seismic offsets can be precisely estimated. By using a sedimentation rate deduced from Pb-210 decrease curve (0.5 mmyr(-1)) and taking into account minor reworking events detected in cores, we show that the Redonda system may have been responsible for five > M-6 events during the last 34 000 yr. The approach presented in this work differs from fault activity analyses using displaced sets of isochronous surfaces and postulating co-seismic offsets. Combining VHR seismic imagery and coring we can decipher co-seismic vs. slow continuous displacement, and thus actually estimate the amplitude and the time distribution of major co-seismic offsets.
Natural Hazards And Earth System Sciences (1561-8633) (Copernicus Gesellschaft Mbh), 2012 , Vol. 12 , N. 5 , P. 1755-1767

Droits : Author(s) 2012. CC Attribution 3.0 License.
http://archimer.ifremer.fr/doc/00089/20040/21990.pdf
DOI:10.5194/nhess-12-1755-2012
http://archimer.ifremer.fr/doc/00089/20040/

Éditeur(s) : Scientific Technical Research Council Turkey-tubitak
Résumé : In 2002, the Bosphorus outlet was mapped using an EM 300 multibeam echo-sounder together with a Chirp sonar system. This survey, carried out on board the Ifremer RV 'Le Suroit' in the frame of the BlaSON project, completes the data previously acquired directly at the mouth of the Bosphorus by Di Iorio et al. (1999) in the frame of a NATO SACLANT Undersea Research project using jointly the NATO RV Alliance, and the Turkish Navy Survey ship 'Cubuklu'. This acoustic imaging has identified a canyon system at the slope and a shallow marine fan, which contains shelf incisions extending the Istanbul Strait incision. Multibeam bathymetry, ultra-high resolution seismic profiling and coring correlations on this subaqueous fan area allowed reconstruction of morphology and patterns of sediment distribution indicative of high energy sediment transport processes. The discovery of a shallow water/shelf type fan directly off shore from the Bosphorus and connected to its outlet is consistent with the theories of sudden discharges of large volumes of water. Age dating obtained at the bottom of this subaqueous shelf fan yielded an age of 6700 yr C-14 BP (uncorrected age) for the first marine mollusc encountered at the base. This is in accordance with a last and abrupt reconnection of the Marmara Sea to the Black Sea. A detailed morphological map of the shelf and slope along with seismic profile interpretation and core correlation is presented here. A synthesis is proposed to explain the formation of this subaqueous fan and its relationship with the last connection between Black and Marmara seas aft er the Last Glacial Maximum. This interpretation can be summarized as follows: stage A corresponds to the first erosion surface seen on the shelf related to the Last Glacial Maximum low stand; stage B is the ravine surface onlapping to ca. -30, -40 m; stage C is a second erosional surface related to a sea level fall and eroding most of underlying Unit 1B; and stage D corresponds to the onset of the fan deposit during a period of high water run-off from the Black Sea entering from the Bosphorus. Avulsion branches show that this fan has been active for a long time.
Turkish Journal Of Earth Sciences (1300-0985) (Scientific Technical Research Council Turkey-tubitak), 2011 , Vol. 20 , N. 3 , P. 287-305

Droits : 2011 TÜBİTAK
http://archimer.ifremer.fr/doc/00036/14676/13677.pdf
http://archimer.ifremer.fr/doc/00036/14676/

Éditeur(s) : HAL CCSD Elsevier Masson
Résumé : International audience
Symbioses with the dinoflagellate Symbiodinium are widespread among marine invertebrates and protists, especially in nutritionally demanding habitats, such as tropical coral reefs, where they play a major role in ecosystem survival. Moreover, apart from corals and sea anemones, many of the Symbiodinium species and clades involved in these partnerships remain to be characterized. This study provides new insights into nudibranch and sponge associations with Symbiodinium by sequencing regions of the Symbiodinium 28S rDNA and the host mitochondrial COI oxidase. Specimens were sampled between 2011 and 2013 from locations around the islands of Moorea and Tahiti, French Polynesia. Our results revealed that some of the sponges and nudibranchs harbored typical Symbiodinium from clade B or C while others harbored new, undescribed Symbiodinium-like dinoflagellates. A detailed analysis of the different life stages of the nudibranch Phestilla lugubris and of its specific coral prey, Porites rus, suggests a prey-predator horizontal transfer of the symbiont and its vertical inheritance from the parent to the eggs.
Les symbioses à zooxanthelles, dinoflagellés du genre Symbiodinium, sont largement répandues chez les invertébrés marins et les protozoaires, notamment dans les eaux oligotrophes, où ils jouent un rôle important dans la survie des récifs coralliens. De plus, excepté chez les coraux et les anémones, les différentes espèces et clades de Symbiodinium impliqués dans ces associations restent à être caractérisés. Notre étude, grâce à l’utilisation des marqueurs génétiques 28S ADNr des Symbiodinium et la sous-unité 1 de la cytochrome oxydase mitochondriale (COI) de l’hôte, procure de nouvelles données quant aux associations des éponges et des nudibranches avec les Symbiodinium. L’échantillonnage a eu lieu autour de Moorea et de Tahiti (Polynésie française), entre 2011 et 2013. Nos résultats révèlent que certaines espèces d’éponges et de nudibranches possèdent les clades B et C communément retrouvés, chez les coraux notamment, alors que d’autres présentent de nouveaux dinoflagellés « Symbiodinium-like ». Une analyses détaillée des Symbiodinium à différents stades du cycle de vie du nudibranche corallivore Phestilla lugubris et de son corail hôte Porites rus suggèrent l’existence d’un transfert horizontal de Symbiodinium proie–prédateur et un transfert vertical du parent P. lugubris à ses œufs.
ISSN: 1631-0691

hal-01145518
https://hal.archives-ouvertes.fr/hal-01145518
DOI : 10.1016/j.crvi.2015.01.005

Résumé : Les poissons herbivores jouent un rôle écologique majeur face au phénomène de « coral-algal phase-shift », qui sévit depuis le début des années 80 dans les récifs coralliens de la Caraïbe. Dans cette étude, les habitudes alimentaires des principales espèces de poissons herbivores ont été étudiées afin de comprendre comment ces espèces utilisent et se partagent les ressources trophiques en milieu récifal et dans les herbiers. Les niches trophiques de ces espèces ont été décrites par deux méthodes complémentaires: les analyses des contenus des tractus digestifs et les analyses des isotopes stables du carbone C3C/ 12C) et de l'azoteCSN/ '4N). La qualité nutritionnelle des sources alimentaires a été évaluée par leurs concentrations de macronutriments (protéines, lipides, glucides solubles et insolubles) afin d'expliquer en partie le choix des ressources par les herbivores. Parmi les 14 espèces de poissons étudiées, appartenant aux familles des Pomacentridae, des Acanthuridae et des Scaridae, huit types de niches trophiques ont été décrits, indiquant une diversité fonctionnelle de ces espèces. Les niches trophiques décrites sont occupées par une ou plusieurs espèces, indépendamment de leur morphologie et de leurs affinités taxinomiques. Les résultats de cette étude suggèrent une complémentarité entre ces espèces, en terme d'utilisation des ressources, et soulèvent la question de leur conservation afin de préserver leur rôle écologique dans les écosystèmes côtiers de la Caraïbe.
Herbivorous fishes play a major ecological role against the « coral-algal phase-shift » phenomenon in the coral reefs of the Caribbean. In this study, the feeding patterns of the most important species of herbivorous fishes have been studied to understand how these species use and share the trophic resources on reefs and seagrass beds . Trophic niches of these species have been described by two complementary methods: the analyses oftheir digestive contents and the analyses of stable isotopes of carbon C3C/ J2C) and nitrogen (lsN/14N). The nutritional quality of the sources has been evaluated by their concentrations of macronutrients (proteins, lipids, soluble and insoluble carbohydrates) to explain partially the choice of resources by herbivorous fishes . Among the 14 studied species of herbivorous fishes (Pomacentridae, Acanthuridae and Scaridae), eight types of trophic niches have been described, indicating a functional diversity of these species . The trophic niches are occupied by one or several species, independently oftheir morphology or their taxonomie affinities. The results of this study suggest a complementarity among these species and raise the question of their conservation to preserve their ecological role on marine ecosystems of the Caribbean.

http://www.theses.fr/2013AGUY0597/document

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
The Cycladic Blueschist Unit (CBU) represents the northern passive margin of the Adria continental block and ophiolites that are the remnants of the Pindos Ocean, which were affected by high pressure-low temperature metamorphism in the blueschist and eclogite facies during the Eocene. Prior to the Lutetian, the ophiolitic and margin units were thrust towards the SW inside a NE-dipping subduction zone. Two subsequent exhumation stages are characterized by top-to-the-NE senses of shear: i) from mantle depths to lower crustal levels, before 37 Ma, which was accommodated by an extensional inversion of the Vardar suture zone, and ii) from deep crustal levels to the near-surface, between 30 and 20 Ma, which was accommodated by the North Cycladic Detachment. It is during this late stage of ductile exhumation that the central Cyclades Core Complex was exhumed. Segmentation of the CBU by normal faults started at 12 Ma, as recorded by the low temperature thermochronometers, and was coeval with block rotation and folding with NS-trending axes, which were predominantly controlled by the Myrthes-Ikaria strike-slip fault in the centre of the Cyclades. A map restoration of the CBU geometry, prior to segmentation, has been carried out using available structural and paleomagnetic data. The restoration shows that, following the CBU exhumation from mantle depths to crustal levels, a single core complex was exhumed along a single NE dipping detachment.
ISSN: 0040-1951

insu-00672320
https://hal-insu.archives-ouvertes.fr/insu-00672320
DOI : 10.1016/j.tecto.2011.12.025

Éditeur(s) : Elsevier
Résumé : Analysis of new high-resolution seismic-reflection profiles, chirp profiles and previously published sidescan data, together with piston cores on the Danube Fan provide new insight into the recent sedimentation processes in the deep northwestern Black Sea.The latest channel-levee system on the Danube Fan developed probably during the Neoeuxinian lowstand (oxygene isotope stage 2) in a semi-freshwater basin with a water level about 100 m lower than today. Sediment supplied by the Danube was transported to the deep basin through the Viteaz Canyon, which was directly connected to the leveed channel of this system on the middle slope. Channel avulsion was common in the middle fan, as indicated by four main phases of bifurcation. Each phase developed after the same pattern: breaching of the lower and narrower left levee by turbidity currents, building of a unit of High Amplitude Reflection Packets (HARP) by the unchannelized flow while the former channel was abandoned, followed by initiation of a new meandering leveed channel. The northward migration through successive bifurcations is influenced by the asymmetry between levees, hence by the Coriolis effect. In the lower fan where the levees became too low to maintain a stable pathway for the turbiditic flows, channel migration occurred. Locations of HARPs and channels after bifurcation are controlled by the pre-existing bathymetry. Sedimentary deposits are confined between the high levees of unit 0 (the initial phase of the youngest channel-levee system) to the south, and the steep relief of the Dniepr Fan to the north.The HARPs of the most recent phase of avulsion are the most severely constrained by local topography and form a very narrow elongate structure that is at most half as thick as the previous HARPs. Their distal part is not covered by channel-levee systems and is visible both on sidescan mosaics and on chirp profiles and was sampled in core BLKS 98-20.Sea level controlled fan activity but the evolution of the last channel-levee system with several bifurcations during a single sea level lowstand suggests that the primary control of channel avulsion and sand delivery is probably autocyclic.The presence of important HARP sand bodies in the mud-rich Danube Fan is presumed by analogy with a similar seismic facies on the Amazon Fan and indicated by the sands cored in BLKS98-20. However, only drilling of the HARP units could verify this interpretation.
Marine Geology (0025-3227) (Elsevier), 2001-09 , Vol. 179 , N. 1-2 , P. 25-37

Droits : 2001 Elsevier Science B.V. All rights reserved
http://archimer.ifremer.fr/doc/2001/publication-474.pdf
DOI:10.1016/S0025-3227(01)00197-9
http://archimer.ifremer.fr/doc/00000/474/

Éditeur(s) : Gauthier-Villars
Résumé : During Leg 66 eight sites were drilled to form a transect across the Middle America Trench off southwestern Mexico. Cores from these sites show that accretion began approximately 10 MY ago and has continued to the present. Accretion began with offscraping followed by a 2- to 4- MY episode of folding and faulting with uplift rates of 400-500 m/MY; uplift then slowed to 100-200 m/MY, and seismically resolved deformation ceased as the wedge appeared to rise evenly. Approximately 33% of the sediment flux input into the subduction zone, mainly trench sand and slump deposits, is scraped off and incorporated into the toe of the lower slope; an additional 33% is initially subducted but then peeled off to underplate the accretionary wedge; the remaining 33% is subducted landward beneath the overhanging lip of continental crust. Although we find no direct evidence of tectonic erosion, the large amount of sediment subducted makes tectonic erosion feasible.
Oceanologica Acta, Special issue (0399-1784) (Gauthier-Villars), 1981

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/00245/35668/34176.pdf
http://archimer.ifremer.fr/doc/00245/35668/

Éditeur(s) : HAL CCSD
Résumé : International audience
The identification and economic valuation of ecosystem services (ES) are becoming important components of coral reef management. In many contexts, protection of human assets against coastal floods is one of the most important ES provided by coral reefs. The methods utilized to characterize this ES should be able to accommodate situations with low data availability, without sacrificing robustness. In this paper, we suggest such an approach that utilizes expert opinion and does not require copious amounts of data. Our primary objective is to find a balance between simple and complex models that can be used in a data scarce environment, to produce an economic valuation of the coral reef ES of protection against coastal floods. The approach has three steps: (i) identify geographic zones and assets at risk, (ii) identify the contributing role of coral reefs in the protection of coasts and, (iii) value the annual repair costs of assets through the avoided damage cost approach. The proposed method seems appropriate for advocacy with policy makers, but appears to be less effective for small scale approaches, such as those required for Payment for ES negotiations or marine spatial planning.
Ecosystem Services

hal-01359394
https://hal-univ-perp.archives-ouvertes.fr/hal-01359394
DOI : 10.1016/j.ecoser.2016.07.005

Éditeur(s) : Inter-research
Résumé : Environmental conditions experienced by aquatic organisms are archived in biogenic carbonates such as fish otoliths, bivalve shells and coral skeletons. These calcified structures present an accretionary growth and variations in optical properties - color or opacity - that are used to reconstruct time. Full and reliable exploitation of the information extracted from these structures is, however, often limited as the metabolic processes that control their growth and their optical properties are poorly understood. Here, we propose a new modeling framework that couples both the growth of a biogenic carbonate and its optical properties with the metabolism of the organism. The model relies on well-tested properties of Dynamic Energy Budget (DEB) theory. It is applied to otoliths of the Bay of Biscay anchovy (Engraulis encrasicolus) for which a DEB model has been previously developed. The model reproduces well-known otolith patterns and thus provides us with mechanisms for the metabolic control of otolith size and opacity at the scale of an individual lifespan. Two original contributions using this framework are demonstrated. First, the model can be used to reconstruct the temporal variations in the food assimilated by an individual fish. Reconstructing food conditions of past and present aquatic species in their natural environment is key ecological information to better understand population dynamics. Second, we show that non-seasonal checks can be discriminated from seasonal checks, which is a well-recognized problem when interpreting fish otoliths. We discuss further developments of the model and the experimental settings required to test this new promising framework.
Marine Ecology-progress Series (0171-8630) (Inter-research), 2012 , Vol. 447 , P. 151-164

Droits : 2012 Inter-Research
http://archimer.ifremer.fr/doc/00060/17082/14593.pdf
DOI:10.3354/meps09492
http://archimer.ifremer.fr/doc/00060/17082/

Éditeur(s) : Copernicus Gesellschaft Mbh
Résumé : The distributions of the bio-essential trace element dissolved cobalt (DCo) and the apparent particulate Co (PCo) are presented along the GEOTRACES-A02 deep section from 64(o) N to 50(o) S in the western Atlantic Ocean (longest section of international GEOTRACES marine environment program). PCo was determined as the difference between total cobalt (TCo, unfiltered samples) and DCo. DCo concentrations ranged from 14.7 pM to 94.3 pM, and PCo concentrations from undetectable values to 18.8 pM. The lowest DCo concentrations were observed in the subtropical domains, and the highest in the low-oxygenated Atlantic Central Waters (ACW), which appears to be the major reservoir of DCo in the western Atlantic. In the Antarctic Bottom Waters, the enrichment in DCo with aging of the water mass can be related to suspension and redissolution of bottom sediments a well as diffusion of DCo from abyssal sediments. Mixing and dilution of deep water masses, rather than scavenging of DCo onto settling particles, generated the meridional decrease of DCo along the southward large-scale circulation in the deep western Atlantic. Furthermore, the apparent scavenged profile of DCo observed in the deep waters likely resulted from the persistence of relatively high concentrations in intermediate waters and low DCo concentrations in underlaying bottom waters. We suggest that the 2010 Icelandic volcanic eruption could have been a source of DCo that could have been transported into the core of the Northeast Atlantic Deep Waters. At intermediate depths, the high concentrations of DCo recorded in the ACW linearly correlated with the apparent utilization of oxygen (AOU), indicating that remineralization of DCo could be significant (representing up to 37% of the DCo present). Furthermore, the preferential remineralization of phosphate (P) compared to Co in these low-oxygenated waters suggests a decoupling between the deep cycles of P and Co. The vertical diffusion of DCo from the ACW appears to be a significant source of DCo into the surface waters of the equatorial domain. Summarizing, the dilution due to mixing processes rather than scavenging of DCo and the above-mentioned remineralization could be the two major pathways controlling the cycling of DCo into the intermediate and deep western Atlantic.
Biogeosciences (1726-4170) (Copernicus Gesellschaft Mbh), 2014 , Vol. 11 , N. 6 , P. 1561-1580

Droits : Author(s) 2014. CC Attribution 3.0 License.
http://archimer.ifremer.fr/doc/00241/35223/33727.pdf
DOI:10.5194/bg-11-1561-2014
http://archimer.ifremer.fr/doc/00241/35223/

Éditeur(s) : HAL CCSD University of Uludag
Résumé : International audience
The aim of this study was to compare the core temperature (TC) and markers of hydration status in athletes performing a half Ironman triathlon race in hot and humid conditions (27.2 ± 0.5°C, relative humidity was 80 ± 2%). Before and immediately after the 2012 Guadeloupe half Ironman triathlon, body mass and urine osmolarity (mean ± SD) were measured in 19 well-trained male triathletes. TC was measured before and after the race, and at each transition during the event, using an ingestible pill telemetry system. Ambient temperature and heart rate (HR) were measured throughout the race. Mean ± SD performance time was 331 ± 36 minutes and HR was 147 ± 16 beats·min-1. Wet bulb globe temperature (WBGT) averaged 25.4 ± 1.0°C and ocean temperature was 29.5°C. The average TC at the beginning of the race (TC1) was 37.1 ± 0.7°C; it was 37.8 ± 0.9°C after swimming (TC2), 37.8 ± 1.0°C after cycling (TC3), and (TC4) 38.4 ± 0.7°C after running. Body mass significantly declined during the race by 3.7 ± 1.9 kg (4.8 ± 2.4%; p < 0.05), whereas urine osmolarity significantly increased from 491.6 ± 300.6 to 557.9 ± 207.9 mosm·L-1 (p < 0.05). Changes in body mass were not related to finishing TC or urine osmolarity. Ad libitum fluid intake appears applicable to athletes acclimatized to tropical climate, when performing a half Ironman triathlon in a warm and humid environment.
ISSN: 1303-2968

hal-01136698
https://hal.univ-antilles.fr/hal-01136698
https://hal.univ-antilles.fr/hal-01136698/document
https://hal.univ-antilles.fr/hal-01136698/file/Baillot%2C%20Hue%20-%202015%20-%20Hydration%20and%20Thermoregulation%20during%20a%20Half-Ironman%20Performed%20in%20Tropical%20Climate.pdf

Éditeur(s) : HAL CCSD Royal Society
Résumé : Coral bleaching events are predicted to occur more frequently in the coming decades with global warming. The susceptibility of corals to bleaching during thermal stress episodes depends on many factors, including the magnitude of thermal stress and irradiance. The interactions among these two factors, and in particular with ultra-violet radiation (UVR), the most harmful component of light, are more complex than assumed, and are not yet well understood. This paper explores the individual and combined effects of temperature and UVR on the metabolism of Acropora muricata, one of the most abundant coral species worldwide. Particulate and dissolved organic matter (POM/DOM) fluxes and organic matter (OM) degradation by the mucus-associated bacteria were also monitored in all conditions. The results show that UVR exposure exacerbated the temperature-induced bleaching, but did not affect OM fluxes, which were only altered by seawater warming. Temperature increase induced a shift from POM release and DOM uptake in healthy corals to POM uptake and DOM release in stressed ones. POM uptake was linked to a significant grazing of pico- and nanoplankton particles during the incubation, to fulfil the energetic requirements of A. muricata in the absence of autotrophy. Finally, OM degradation by mucus-associated bacterial activity was unaffected by UVR exposure, but significantly increased under high temperature. Altogether, our results demonstrate that seawater warming and UVR not only affect coral physiology, but also the way corals interact with the surrounding seawater, with potential consequences for coral reef biogeochemical cycles and food webs.
ISSN: 2046-6390

hal-01606454
https://hal.archives-ouvertes.fr/hal-01606454
DOI : 10.1242/bio.026757
PRODINRA : 406580
PUBMED : 28811302

Éditeur(s) : Amer Soc Biochemistry Molecular Biology Inc
Résumé : Scleractinian corals are the most basal eumetazoan taxon and provide the biological and physical framework for coral reefs, which are among the most diverse of all ecosystems. Over the past three decades and coincident with climate change, these phototrophic symbiotic organisms have been subject to increasingly frequent and severe diseases, which are now geographically widespread and a major threat to these ecosystems. Although coral immunity has been the subject of increasing study, the available information remains fragmentary, especially with respect to coral antimicrobial responses. In this study, we characterized damicornin from Pocillopora damicornis, the first scleractinian antimicrobial peptide (AMP) to be reported. We found that its precursor has a segmented organization comprising a signal peptide, an acidic proregion, and the C-terminal AMP. The 40-residue AMP is cationic, C-terminally amidated, and characterized by the presence of six cysteine molecules joined by three intramolecular disulfide bridges. Its cysteine array is common to another AMP and toxins from cnidarians; this suggests a common ancestor, as has been proposed for AMPs and toxins from arthropods. Damicornin was active in vitro against Gram-positive bacteria and the fungus Fusarium oxysporum. Damicornin expression was studied using a combination of immunohistochemistry, reverse phase HPLC, and quantitative RT-PCR. Our data show that damicornin is constitutively transcribed in ectodermal granular cells, where it is stored, and further released in response to nonpathogenic immune challenge. Damicornin gene expression was repressed by the coral pathogen Vibrio coralliilyticus. This is the first evidence of AMP gene repression in a host-Vibrio interaction.
Journal Of Biological Chemistry (0021-9258) (Amer Soc Biochemistry Molecular Biology Inc), 2011-06 , Vol. 286 , N. 25 , P. 22688-22698

Droits : 2011 by The American Society for Biochemistry and Molecular Biology, Inc.
http://archimer.ifremer.fr/doc/00039/14996/12433.pdf
DOI:10.1074/jbc.M110.216358
http://archimer.ifremer.fr/doc/00039/14996/

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Studies of paleomagnetic fields during polarity transitions recorded over the past few million years frequently suggest a configurational persistence consistent with long-lived mantle control over the pattern of flux emanating from Earth's fluid core. Fundamental to an understanding of the core-mantle dynamics involved is the question of the spatial-temporal nature of the physical conditions at the base of the mantle that may be responsible. Our analysis of the field during a mid-Cenozoic, reverse-to-normal (R-N) polarity change, recorded in a continuous sequence of lava flows in southeastern Queensland, Australia, provides strong evidence that the time span over which local mantle features retain such an influence is far longer than had thus far been observed. Specifically. the reversal is dominated by two sequential groupings of transitional magnetic vector directions, each associated with a clustering of virtual geomagnetic poles (VGPs) at locations common to several more youthful reversal datasets from about the globe. Our Ar-40/Ar-39 age determinations indicate that these Australian lavas erupted 25.56 +/- 0.48 Ma, strongly suggesting that the characteristic time for invariant control by the mantle over flux emerging from the outer core is at least on order of a few tens of Myr. The availability of transitional paleomagnetic data from still earlier times within the Cenozoic may further delineate this duration and, perhaps, provide a means to track changes in the pattern of long-standing concentrations of magnetic flux at the core-mantle boundary. (C) 2008 Elsevier B.V. All rights reserved.
ISSN: 0031-9201

hal-00411919
https://hal.archives-ouvertes.fr/hal-00411919
DOI : 10.1016/j.pepi.2008.07.012

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
The seismic anisotropy of the deep Earth is reviewed as a profile from the upper mantle to the solid inner core at the centre of the Earth. The upper mantle is by far the most anisotropic region of the Earth, followed the D” layer above the core mantle boundary. In contrast it is shown that many minerals that are present in the upper mantle, transition zone, lower mantle, D” layer and solid inner core are elastically anisotropic to different degrees. The anisotropy of hydrous phases present in subduction zones is briefly introduced. The basic concepts of single crystal and polycrystalline elasticity and the extrapolation of elastic properties to high temperature and pressure are presented. The specific features of elastic wave propagation in an anisotropic medium of any arbitrary symmetry are illustrated using mantle and inner core phases. The roles of crystal preferred orientation, water and melt in producing seismic anisotropy in the upper mantle are discussed.
Treatese of Geophysics, vol.2

hal-00408321
https://hal.archives-ouvertes.fr/hal-00408321
DOI : 10.1016/B978-044452748-6.00045-6