Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
A set-valued upper semi-continuous map is called an Rδ -map if each of its values is an Rδ -set (we recall that an Rδ -set is a space that can be represented as the intersection of a decreasing sequence of compact AR-spaces). We prove that a compact set-valued map of an AR-space into itself has a fixed point provided it can be factorized by an arbitrary finite number of Rδ -maps through ANR-spaces. This fact is a consequence of a more general result which is the main goal of this note. The proof relies on a refinement of the approximation technique and does not make use of homological tools.
ISSN: 0166-8641

hal-00699222
https://hal.archives-ouvertes.fr/hal-00699222

Éditeur(s) : HAL CCSD
Résumé : The Earth's magnetic field shows a large range of temporal variations from the year to several million years. I studied during my PhD thesis several aspects of these fluctuations, from recent secular variations to reversals. The first part of my manuscript deals with archeomagnetism, a discipline that allows to track the temporal variations of the Earth's magnetic field through millennia, mainly from archeological materials. I studied two sets of samples , one from Greece (Neolithic period 6800-3200 B.C.) and the other from Mexico (Palenque, Maya Classic period 320-840 A.D.), to acquire new archeointensity data in order to better constrain the secular variation of the geomagnetic field. By comparing my data with those available in the literature and with the various global and regional models, I showed that the secular variations during the Neolithic in Greece and during the first millennium in Central America are poorly defined. My data suggest that local components, not described by global models, may exist in these regions. They reinforce the importance of developing specific regional models. As a consequence, the acquisition of new high quality data is of main importance. The second part presents the description of a geomagnetic field reversal. This work was based on two points : first by studying transitional directions to provide new constraints on the possible preferred longitudinal paths of virtual geomagnetic poles (VGPs) and second by checking transitional paleointensities obtained on a volcanic sequence in Akaroa volcano (New Zealand). Indeed the transitional field intensity is significantly higher than the field intensity before and after the reversal. We re-sampled this sequence, and the directional results show a complex sequence of N-T-R-T-N-T-R polarity. The transitional VGPs obtained are clustered in two longitudinal bands through Australia and America. This observation seems to reinforce the assumption of a core-mantle interaction over several million years. Following a rock magnetic study, I selected samples that could provide a value for the Thellier and multispecimen paleointensity methods. The obtained paleointensity are relatively low (about 20 μT) during the polarity change and strong at the end of the sequence. Based both on the field strength values and on the radiochronological ages, showing that the sequence was erupted in a very short time, I suggest that only the C4AR.1n-C4Ar.1r reversal was recorded in this sequence. In this assumption, the reversal shows a complex path comparable to other reversals recorded in the northern hemisphere (for example the Steens Mountain ), including a rebound before stabilizing. Finally the last part is devoted to the development of a new methodology and a new apparatus to determine absolute paleointensity. Following the low success rate of paleointensity experiments from the previous study, I decided to test the multispecimen protocol, which can be applied to samples yielding a predominant multidomaine behavior. The main technical drawback of this method lies in the application of the laboratory field along the natural remanent magnetization, a difficult task to perform accurately in standard paleointensity ovens. Thus, we decided to adapt sample holders from our standard oven in order to allow the sample orientation in space and to develop an ultra-fast heating oven prototype particularly well-suited for this method, allowing to apply the laboratory field in the 3 dimensions. I checked the different multispecimen protocols on historical lavas from Reunion and Etna volcano, yielding very different magnetic mineralogies. For all flows, I obtained paleointensities very close from the expected values, regardless from the magnetic mineralogy, revealing the feasibility of our apparatus and the promising interest of the method. The application of various corrections on the statistical estimation of the intensity value or on the cooling rate had no significant impact on my results.
La première partie de ma thèse porte sur l'archéomagnétisme, discipline qui permet de retracer l'évolution temporelle du champ magnétique terrestre au travers des derniers millénaires, principalement à partir des matériaux archéologiques. J'ai étudié deux jeux d'échantillons provenant pour l'un de la Grèce (période néolithique, 6800-3200 avant J.C.) et pour l'autre du Mexique (Palenque, période Maya Classique 320-840 après J.C.), dans le but d'acquérir de nouvelles données d'archéointensité et de mieux contraindre la variation séculaire du champ magnétique terrestre. La comparaison de mes données avec celles disponibles dans la bibliographie et avec les différents modèles globaux et régionaux a mis en évidence que les variations séculaires au Néolithique en Grèce et au cours du premier millénaire en Amérique Centrale sont très mal définies. Mes données suggèrent que des composantes locales, non prisent en compte dans les modèles globaux peuvent exister au niveau de ces régions. Elles renforcent l'intérêt de développer des modèles régionaux précis. Pour ce faire, l'acquisition de nouvelles données de haute qualitéest un élément majeur. La deuxième partie traite de la description d'un renversement du champ magnétique terrestre. Cette étude a été basée sur deux points précis : étudier les directions transitionnelles afin d'apporter de nouvelles contraintes sur le possible confinement longitudinal des pôles géomagnétiques virtuels (PGV) d'une part, et d'autre part vérifier des paléointensités transitionnelles obtenues sur la séquence volcanique d'Akaroa (Nouvelle Zélande), dont l'intensité est significativement supérieure à celles des intensités avant et après le renversement. Nous avons ré-échantillonné cette séquence, et l'évolution directionnelle obtenue pour ce renversement est une succession complexe de polarités N-T-R-T-N-T-R. Les PGV obtenus semblent se regrouper sous deux bandes longitudinales sous l'Australie et l'Amérique, ce qui renforce l'hypothèse d'une interaction entre le manteau et le noyau sur plusieurs millions d'années. Suite à une étude de minéralogie magnétique, j'ai sélectionné les échantillons susceptibles de fournir une valeur de paléointensité par les méthodes de Thellier et du multispecimen. Les paléointensités obtenues sont relativement faibles (environ 20 μT) au cours du changement de polarité et forte à la fin de la séquence. Mon interprétation, basée à la fois sur les valeurs de l'intensité du champ et sur les données radiochronologiques montrant que la séquence s'est mise en place très rapidement, est de considérer que seul le renversement C4Ar.1n-C4Ar.1r a été enregistré dans cette séquence. Dans cette hypothèse, le renversement montre un cheminement complexe comparable à d'autres renversements enregistrés dans l'hémisphère nord (comme celui de la Steens Mountain par exemple), incluant un phénomène de rebond avant de se stabiliser. La troisième partie de ma thèse est consacrée au développement d'une nouvelle méthodologie et d'un nouvel appareillage pour déterminer des paléointensités. Le faible taux de réussite des expériences de paléointensité de l'étude précédente m'a poussé à m'intéresser au protocole multispecimen, qui peut s'appliquer aux échantillons possédant un comportement polydomaine. L'inconvénient technique majeur de cette méthode réside dans l'application du champ le long de l'aimantation naturelle, difficile à réaliser avec précision dans les fours standards. Pour ce faire, nous avons décidé de développer des porte-échantillons permettant d'orienter les échantillons dans l'espace pour le four standard et un prototype de four à chauffage ultra-rapide particulièrement bien adapté avec la possibilité d'orienter le champ appliqué dans les 3 dimensions. J'ai testé les différents protocoles de la méthode sur des laves historiques de la Réunion et de l'Etna, possédant des minéralogies très différentes. Pour l'ensemble des coulées étudiées, j'ai obtenu des paléointensités très proches des valeurs attendues, et ce indépendamment de la minéralogie, révélant ainsi le faisabilité de notre appareillage et le côté prometteur de la méthode. L'application de diverses corrections sur la statistique d'estimation de la valeur de l'intensité ou sur le taux de refroidissement n'ont eu aucun impact notable sur mes résultats.
https://tel.archives-ouvertes.fr/tel-00719380

tel-00719380
https://tel.archives-ouvertes.fr/tel-00719380
https://tel.archives-ouvertes.fr/tel-00719380/document
https://tel.archives-ouvertes.fr/tel-00719380/file/thesefanjat2012.pdf

Éditeur(s) : HAL CCSD Oxford University Press (OUP)
Résumé : International audience
Motivation: Gene fusion is an important evolutionary process. It can yield valuable information to infer the interactions and functions of proteins. Fused genes have been identified as non-transitive patterns of similarity in triplets of genes. To be computationally tractable, this approach usually imposes an a priori distinction between a dataset in which fused genes are searched for, and a dataset that may have provided genetic material for fusion. This reduces the `genetic space' in which fusion can be discovered, as only a subset of triplets of genes is investigated. Moreover, this approach may have a high-false-positive rate, and it does not identify gene families descending from a common fusion event. Results: We represent similarities between sequences as a network. This leads to an efficient formulation of previous methods of fused gene identification, which we implemented in the Python program FusedTriplets. Furthermore, we propose a new characterization of families of fused genes, as clique minimal separators of the sequence similarity network. This well-studied graph topology provides a robust and fast method of detection, well suited for automatic analyses of big datasets. We implemented this method in the C++ program MosaicFinder, which additionally uses local alignments to discard false-positive candidates and indicates potential fusion points. The grouping into families will help distinguish sequencing or prediction errors from real biological fusions, and it will yield additional insight into the function and history of fused genes.
ISSN: 1367-4803

hal-01544795
https://hal.archives-ouvertes.fr/hal-01544795
DOI : 10.1093/bioinformatics/btt049

Éditeur(s) : HAL CCSD Wiley-Blackwell
Résumé : International audience
This paper aims to decipher the thermal evolution of the Montagne Noire Axial Zone (MNAZ,southern French Massif Central) gneiss core and its metasedimentary cover through determination ofP–T paths and temperature gradients. Migmatitic gneiss from the core of the dome record a clock-wise evolution culminating at 725 25 °C and 0.8 0.1 GPa with partial melting, followed by adecompression path with only minor cooling to 690 25° C and 0.4 0.1 GPa. Field structuralanalyses as well as detailed petrological observations interpreted in a petrogenetic grid indicate thatthe cover sequence experienced LP-HT metamorphism at <0.4 GPa. Apparent thermal gradientswithin the cover were determined with garnet–biotite thermometry and Raman Spectroscopy on Car-bonaceous Matter. High-temperature apparent gradients (e.g. 530 °C km1 along one transect) areexplained by late brittle–ductile extensional shearing evidenced by phyllonites that post-date peakmetamorphism. In areas where normal faults are less abundant and closely spaced, gradients of 20to 50 °C km1 are calculated. These gradients can be accounted for by a combination of domeemplacement and ductile shearing (collapse of isotherms), without additional heat input. Finally, thethermal evolution of the MNAZ is typical for many gneiss domes worldwide as well as with otherLP-HT terranes in the Variscides.
ISSN: 0263-4929

Droits : http://creativecommons.org/licenses/by-nc-nd/
insu-01290388
https://hal-insu.archives-ouvertes.fr/insu-01290388
https://hal-insu.archives-ouvertes.fr/insu-01290388/document
https://hal-insu.archives-ouvertes.fr/insu-01290388/file/jmg12188.pdf
DOI : 10.1111/jmg.12188

Éditeur(s) : HAL CCSD Oxford University Press (OUP): Policy B - Oxford Open Option A Oxford University Press (OUP)
Résumé : International audience
Peridotites exhumed in the footwall of axial detachment faults at slow-spreading ridges are highly serpentinized. Most mid-ocean ridge detachment settings are magmatically active and hydrous fluid circulation in and near the fault has been shown to be influenced by the presence of melt or magmatic lithologies. Our working area along the Southwest Indian Ridge (62–65°E) is nearly amagmatic and represents an end-member to study the hydrous alteration of exhumed peridotites without these magmatic influences. We use an integrated petrological approach combining microstructural, mineralogical and chemical observations to unravel the sequence of serpentinization in 272 dredged samples of variably serpentinized peridotites and to document the circulation of serpentinizing fluids in and near the exhumation faults. We find that serpentine recrystallization and veins overprint the initial serpentinite mesh texture in ∼25% of the samples. Oxygen isotope data suggest that this sequence developed at relatively high temperatures (271–336°C) and under increasing fluid–rock ratios, from near stoichiometry for mesh texture formation to >10 during recrystallization. Increasing fluid supersaturation relative to serpentine favors the replacement of mesh texture lizardite by chrysotile and polygonal or polyhedral serpentine. We attribute local recrystallization into antigorite to moderate Si-metasomatism, possibly following pyroxene serpentinization. We do not observe the more pronounced Si-metasomatism leading to talc replacing serpentine that is reported for the more magmatically active Mid-Atlantic Ridge detachment settings and is attributed to prior leaching of magmatic rocks. Scales of preferential fluid pathways in our samples evolved from pervasive and close-spaced (<500 µm) microfractures during the formation of the initial serpentine mesh texture, to centimeter-thick planar domains of enhanced fluid flux, spaced at ∼10 cm intervals and probably grouped in corridors that may be up to ∼100 m across. Serpentine minerals are enriched in some fluid-mobile elements (Cl, B, U) relative to the peridotite protolith, and several elements (Al, Fe, Si, Cu, As, Sb, REE) are redistributed at the millimeter to decimeter scale. Serpentinizing fluids were seawater-derived, probably mildly alkaline (small to no europium anomalies), reducing and H2-enriched (formation of magnetite). These fluids may have been similar to, though warmer than, those venting at the ultramafic-hosted Lost City hydrothermal fluid (30°N, Mid-Atlantic Ridge).
ISSN: 0022-3530

hal-01174047
https://hal.archives-ouvertes.fr/hal-01174047
DOI : 10.1093/petrology/egv014

Éditeur(s) : HAL CCSD
Résumé : International audience
Given a topological R-module or algebra E and an asymptotic scale MR Λ, we define a natural M-extended topology on the sequence space E Λ, and the M-extension of E as the Hausdorff space associated with the subspace of sequences for which multiplication is continuous with respect to this topology. Colombeau's generalized functions and similar constructions are obtained as special cases, but this new approach also allows the iteration of the construction, which was not possible with previously existing theories. We use only the topology, i.e. neigbourhoods of zero, but not its explicit definition in terms of seminorms, inductive or projective limits etc., which is particularly useful in non-metrizable spaces. Many ideas commonly used in generalized function spaces (functoriality, association, sheaf structure, algebraic analysis, ...) can be applied to a large extent; but reasoning on a category-theoretic level allows the establishment of several results so far only known for particular cases, to the whole class of such spaces.
Integral Transforms and Special Functions
Bedlewo, Poland

hal-00761666
https://hal.univ-antilles.fr/hal-00761666
DOI : 10.1080/10652460802565040

Éditeur(s) : Gauthier-Villars
Résumé : The Mazagan (El Jadida) plateau and escarpment constitute the seaward extension of the Moroccan Meseta. Sedimentary sequence began at least as long ago as the Triassic. A very dense seismic reflection survey (32 profiles at 1 n. mile spacing) and information from 18 Cyana dives on the Mazagan the construction of isochrom map of the depth of the acoustic basement constituted either by jurassic platform carbonates or by Paleozoic granodiorite to Precambrian (?) crystalline basement, and a detailed structural map. The carbonate platform is structured in a succession of tilted blocks from the plateau to the foot of the escarpment. During early Cretaceous times, an important phase of vertical structuration is marked by the denudation of the escarpment. Transgressive sediments of late Cretaceous age cover unconformably the carbonate platform along the outer edge of the Mazagan Plateau. Deformation observed within the sedimentary cover suggests vertical tectonism from late Cretaceous up to the Present.
Oceanologica Acta, Special issue (0399-1784) (Gauthier-Villars), 1985

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/00247/35832/34342.pdf
http://archimer.ifremer.fr/doc/00247/35832/

Éditeur(s) : HAL CCSD Oxford University Press (OUP): Policy P - Oxford Open Option A Oxford University Press (OUP)
Résumé : International audience
It is well known that sedimentary rocks having same porosity can have very different pore size distribution. The pore distribution determines many characteristics of the rock, among which its transport properties are often the most useful. Multifractal analysis is a powerful tool that is increasingly used to characterize the pore space. In this study, we performed multifractal analysis of pore distribution on simulated sedimentary rocks using the relaxed bidisperse ballistic deposition model (RBBDM). The RBBDM can generate a 3-D structure of sedimentary rocks of variable porosity by tuning the fraction p of particles of two different sizes. We also performed multifractal analysis on two samples of real sedimentary rock to compare with the simulation studies. One sample, an oolitic limestone is of high porosity (40 per cent) while the other is a reefal carbonate of low porosity, around 7 per cent. 2-D sections of X-ray microtomographs of the real rocks were stacked sequentially to reconstruct the real rock specimens. Both samples show multifractal character. The results from analysis of real rock agree quite well with the simulated structure of low porosity. The simulated rock of high porosity showed a weak multifractal nature though the real rock sample of similar porosity was found to be strongly multifractal. We propose a ‘structure parameter’ ξ which is a function of porosity and the generalized dimensions, and controls the transport properties of the rock.
ISSN: 0956-540X

hal-01174142
https://hal.archives-ouvertes.fr/hal-01174142
DOI : 10.1093/gji/ggu417

Éditeur(s) : HAL CCSD Cambridge University Press (CUP)
Résumé : International audience
In a recent paper, we gave a topological description of Colombeau type algebras introducing algebras of sequences with exponential weights. Embeddings of Schwartz spaces into the Colombeau algebra G are well known, but for ultradistribution and periodic hyperfunction type spaces we give new constructions. We show that the multiplication of regular enough functions (smooth, ultradifferentiable or quasianalytic), embedded into corresponding algebras, is the ordinary multiplication.
ISSN: 0305-0041

hal-00758568
https://hal.univ-antilles.fr/hal-00758568
https://hal.univ-antilles.fr/hal-00758568/document
https://hal.univ-antilles.fr/hal-00758568/file/DHPV2-9sep03-singlespaced.pdf
DOI : 10.1017/S0305004104007923

Éditeur(s) : HAL CCSD American Geophysical Union
Résumé : International audience
We recover the Holocene earthquake history of seven seismogenic normal faults in the Fucino system, central Italy. We collected 800 samples from the well-preserved limestone scarps of the faults and modeled their 36Cl concentrations to derive their seismic exhumation history. We found that > 30 large earthquakes broke the faults in synchrony over the last 12 ka. The seven faults released strain at the same periods of time, 12-9 ka, 5-3 ka, and 1.5-1 ka. On all faults, the strain accumulation and release occurred in 3-6 ka supercycles, each included a 3-5 ka phase of slow (≤ 0.5-2 mm/yr) strain accumulation in relative quiescence, followed by a cluster of three to four large earthquakes or earthquake sequences that released most of the strain in < 1-2 ka. The large earthquakes repeated every 0.5 ± 0.3 ka during the paroxysmal phases and every 4.3 ± 0.9 ka between those phases. Earthquakes on the northern faults produced twice larger surface slips (~ 2 m) and had larger magnitudes (Mw 6.2-6.7) than those on the southern faults. On most faults, the relative strain level was found to control the amount of slip and the time of occurrence of the next large earthquake. Faults entered a phase of clustered activity once they had reached a specific relative strain threshold. The Tre Monti fault is identified as the most prone to break over the next century. Our data document earthquake synchrony and clustering at a broader space and time scale than has been reported to date.
ISSN: 0148-0227

hal-00903460
https://hal.archives-ouvertes.fr/hal-00903460
DOI : 10.1002/jgrb.50299

Éditeur(s) : HAL CCSD Taylor & Francis
Résumé : International audience
We review our recent formulation of Colombeau-type algebras as Hausdorff sequence spaces with ultranorms, defined by sequences of exponential weights. We extend previous results and give new perspectives related to echelon-type spaces, possible generalizations, asymptotic algebras, concepts of association, and applications thereof.
ISSN: 1065-2469

hal-00758570
https://hal.univ-antilles.fr/hal-00758570
https://hal.univ-antilles.fr/hal-00758570/document
https://hal.univ-antilles.fr/hal-00758570/file/0705.2739v1.pdf
DOI : 10.1080/10652460500437807

Éditeur(s) : HAL CCSD
Résumé : International audience
This paper deals with variational inclusions of the form 0 ∈ K − f(x) − g(x) where f is a smooth function from a reflexive Banach space X into a Banach space Y , g is a function from X into Y admitting divided differences and K is a nonempty closed convex cone in the space Y . We show that the previous problem can be solved by a combination of two methods: the Newton and the Secant methods. We show that the order of the semilocal method obtained is equal to (1 + √5)/2. Numerical results are also given to illustrate the convergence at the end of the paper.
Serdica Math. J.

hal-00924150
https://hal.archives-ouvertes.fr/hal-00924150

Éditeur(s) : HAL CCSD
Résumé : International audience
In this paper we propose a hybrid approach using mutual information and multi-objective optimization for feature subset selection problem. The hybrid aspect is due to the sequence of a filter method and a wrapper method in order to take advantages of both. The filter method reduces the exploration space by keeping subsets having good internal properties and the wrapper method chooses among the remaining subsets with a classification performances criterion. In the filter step, the subsets are evaluated in a multi-objective way to ensure diversity within the subsets. The evaluation is based on the mutual information to estimate the dependency between features and classes and the redundancy between features within the same subset. We kept the non-dominated (Pareto optimal) subsets for the second step. In the wrapper step, the selection is made according to the stability of the subsets regarding classification performances during learning stage on a set of classifiers to avoid the specialization of the selected subsets for a given classifiers. The proposed hybrid approach is experimented on a variety of reference data sets and compared to the classical feature selection methods FSDD and mRMR. The resulting algorithm outperforms these algorithms and the computation complexity remains acceptable even if it increases with regards to these two fast selection methods.
Journal of Informatics and Mathematical Sciences

hal-01375982
https://hal.archives-ouvertes.fr/hal-01375982

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Let H1,H2,H3 be real Hilbert spaces, let C⊂H1, Q⊂H2 be two nonempty closed convex level sets, let A:H1→H3, B:H2→H3 be two bounded linear operators. Our interest is in solving the following new convex feasibility problem Find x∈C,y∈Q such that Ax=By, which allows asymmetric and partial relations between the variables x and y. In this paper, we present and study the convergence of a relaxed alternating CQ-algorithm (RACQA) and show that the sequences generated by such an algorithm weakly converge to a solution of (1.1). The interest of RACQA is that we just need projections onto half-spaces, thus making the relaxed CQ-algorithm implementable. Note that, by taking B=I, in (1.1), we recover the split convex feasibility problem originally introduced in Censor and Elfving (1994) [13] and used later in intensity-modulated radiation therapy (Censor et al. (2006) [11]). We also recover the relaxed CQ-algorithm introduced by Yang (2004) [8] by particularizing both B and a given parameter.
ISSN: 0362-546X

hal-00776638
https://hal.univ-antilles.fr/hal-00776638
DOI : 10.1016/j.na.2012.11.013

Éditeur(s) : HAL CCSD American Mathematical Society
Résumé : International audience
A topological description of various generalized function algebras over corresponding basic locally convex algebras is given. The framework consists of algebras of sequences with appropriate ultra( pseudo)metrics defined by sequences of exponential weights. Such an algebra with embedded Dirac's delta distribution induces discrete topology on the basic space. This result is in analogy to Schwartz' impossibility result concerning multiplication of distributions.
ISSN: 0002-9939

hal-00758571
https://hal.univ-antilles.fr/hal-00758571
https://hal.univ-antilles.fr/hal-00758571/document
https://hal.univ-antilles.fr/hal-00758571/file/0206039v1.pdf

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
The Chenaillet Ophiolite in the Franco-Italian Alps represents a well-exposed ocean-floor sequence that was only weakly overprinted by Alpine metamorphism during its emplacement in the Alpine nappe stack. Pillow lavas showing a Mid Ocean Ridge Basalt (MORB) signature overlie tectonically exhumed gabbros and serpentinized mantle rocks similar to oceanic core complexes (OCC) described from present-day slow- to ultraslow-spreading ridges. Based on detailed mapping it can be shown that: 1) syn-magmatic high-temperature shear zones are truncated by oceanic detachment faults; 2) sediments consisting exclusively of clasts derived from the footwall of the detachment are overlain by voluminous lavas, and 3) emplacement of lavas is linked with high-angle faulting that overprint the oceanic detachment fault. Based on stratigraphic and cross cutting relationships we conclude that: 1) a complex relation between high- and low-temperature shear zones exists, 2) oceanic detachment faults may be obliterated by later emplaced of MOR basalts, and 3) high-angle faults may serve at shallow levels as feeder channels for the overlying pillow basalts. These observations raise questions about the relative relations in time and space between magmatic, hydrothermal and tectonic processes at spreading systems. We propose that the observed change from exhumation along an oceanic detachment fault to high-angle faulting associated with extrusion of volcanic rocks may represent an evolution within a life cycle of a spreading system that may be comparable to present-day slow- to ultraslow-spreading ridges.
ISSN: 0024-4937

hal-00617678
https://hal.archives-ouvertes.fr/hal-00617678
DOI : 10.1016/j.lithos.2010.10.017

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
3D seismic data located in the Gjallar Ridge (Vøring Basin, offshore Norway) reveals a closely-spaced polygonal fault system affecting more than 800 m of homogeneous mud-dominated Quaternary and Tertiary sequences. As some faults reach the modern seafloor, they represent an active polygonal fault system at present day. Even if the processes remain unclear and are still under debate, it is generally agreed that the initiation of polygonal faults is the result of shallow burial dewatering of fine-grained unconsolidated sediments by volumetric compaction. 3D seismic data are commonly interpreted by propagating horizons automatically and by picking faults manually. However, in the case of polygonal fault intervals, this approach is time consuming due to the huge number of faults and because automatic propagation can be misleading. In this study, we applied a new technique of 3D seismic interpretation based on a sequential stratigraphy analysis, using the new PaleoScan© software (Eliis Company). It allowed us to build a 3D geological model computing more than 300 horizons within the faulted intervals. We then used the coherency attribute, depicting anomalies in the shape of seismic waveform like faults, in order to constrain a possible link between fault distribution and stratigraphic levels. Our approach allows fault throws to be calculated in milliseconds on any polygonal fault plane. The result shows that fault segments have been reactivated by dip-linkage. Distribution of faults depends on mechanical units, intervals characterized by different petrophysical properties, which are independent from lithological and diagenetic changes. According to these results, we propose a model showing the evolution of polygonal fault intervals in which faulting stages are separated by a quiescence phase during burial. A first tier of polygonal faults is initiated at a specific depth, according to the Cam-clay model. Then, following a period of quiescence during which mud-rich sediments continued to accumulate, new fault segments are initiated above the first mechanical unit and within this undeformed interval. New nucleated faults then connect downward to pre-existing underlying polygonal fault system, thus progressively increasing the thickness of the faulted interval.
ISSN: 0025-3227

hal-00772470
https://hal.archives-ouvertes.fr/hal-00772470
DOI : 10.1016/j.margeo.2012.07.016

Éditeur(s) : HAL CCSD International Publishing Service/IPS
Résumé : International audience
We give a description of various algebras of generalized functions based on the introduction of pseudo-ultranorms on spaces of sequences in given locally convex function algebras. We study sheaf properties of these algebras, needed for microlocal analysis, and also consider regularity theory, functoriality and different concepts of association and weak equality in a unified setting. Using this approach, we also give new results on embeddings of ultradistribution and hyperfunction spaces into corresponding algebras of generalized functions.
ISSN: 0012-3862

hal-00758044
https://hal.univ-antilles.fr/hal-00758044
https://hal.univ-antilles.fr/hal-00758044/document
https://hal.univ-antilles.fr/hal-00758044/file/DHPV-26oct-8nov06.pdf
DOI : 10.4064/dm447-0-1

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Background : Biological communities are normally composed of a few abundant and many rare species. This pattern is particularly prominent in microbial communities, in which most constituent taxa are usually extremely rare. Although abundant and rare subcommunities may present intrinsic characteristics that could be crucial for understanding community dynamics and ecosystem functioning, microbiologists normally do not differentiate between them. Here, we investigate abundant and rare subcommunities of marine microbial eukaryotes, a crucial group of organisms that remains among the least-explored biodiversity components of the biosphere. We surveyed surface waters of six separate coastal locations in Europe, independently considering the picoplankton, nanoplankton, and microplankton/mesoplankton organismal size fractions.Results : Deep Illumina sequencing of the 18S rRNA indicated that the abundant regional community was mostly structured by organismal size fraction, whereas the rare regional community was mainly structured by geographic origin. However, some abundant and rare taxa presented similar biogeography, pointing to spatiotemporal structure in the rare microeukaryote biosphere. Abundant and rare subcommunities presented regular proportions across samples, indicating similar species-abundance distributions despite taxonomic compositional variation. Several taxa were abundant in one location and rare in other locations, suggesting large oscillations in abundance. The substantial amount of metabolically active lineages found in the rare biosphere suggests that this subcommunity constitutes a diversity reservoir that can respond rapidly to environmental change.Conclusions : We propose that marine planktonic microeukaryote assemblages incorporate dynamic and metabolically active abundant and rare subcommunities, with contrasting structuring patterns but fairly regular proportions, across space and time.
ISSN: 0960-9822

hal-01149637
http://hal.upmc.fr/hal-01149637
http://hal.upmc.fr/hal-01149637/document
http://hal.upmc.fr/hal-01149637/file/Logares_et_al_CurrentBiol_accepted.pdf
DOI : 10.1016/j.cub.2014.02.050

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
We propose a new geometric approach to describe the qualitative dynamics of chemical reactions networks. By this method we identify metastable regimes, defined as low dimensional regions of the phase space close to which the dynamics is much slower compared to the rest of the phase space. These metastable regimes depend on the network topology and on the orders of magnitude of the kinetic parameters. Benchmarking of the method on a computational biology model repository suggests that the number of metastable regimes is sub-exponential in the number of variables and equations. The dynamics of the network can be described as a sequence of jumps from one metastable regime to another. We show that a geometrically computed con-nectivity graph restricts the set of possible jumps. We also provide finite state machine (Markov chain) models for such dynamic changes. Applied to signal transduction models, our approach unravels dynamical and functional * corresponding author capacities of signalling pathways, as well as parameters responsible for speci-ficity of the pathway response. In particular, for a model of TGFβ signalling, we find that the ratio of TGFBR2 to TGFBR1 receptors concentrations can be used to discriminate between metastable regimes. Using expression data from the NCI60 panel of human tumor cell lines, we show that aggressive and non-aggressive tumour cell lines function in different metastable regimes and can be distinguished by measuring the relative concentrations of receptors of the two types.
ISSN: 0303-2647

hal-01379033
https://hal.inria.fr/hal-01379033
https://hal.inria.fr/hal-01379033/document
https://hal.inria.fr/hal-01379033/file/Samal_et_al_Biosystems_final.pdf
DOI : 10.1016/j.biosystems.2016.07.004