Éditeur(s) : HAL CCSD
Résumé : International audience
This paper provides a simple algorithm for writer identification of historical letters. The collected database is an original historical database, of 100 pages belonging to 25 people selected from a 500 letters database. In the article there is presented an article for a cauterization of the letters, because the system doesn't have the templates of the classes and doesn't know how many classes is in the database. The obtained result shows that automatic identification can help historical experts to segregate the documents, before they would analyze the text information.
17th Biennial Conference of the International Graphonomics Society
Pointe-à-Pitre, Guadeloupe

hal-01165915
https://hal.univ-antilles.fr/hal-01165915
https://hal.univ-antilles.fr/hal-01165915/document
https://hal.univ-antilles.fr/hal-01165915/file/IGS_2015_submission_32.pdf

Éditeur(s) : HAL CCSD
Résumé :  
Afin de comprendre l'organisation des communautés de chauves-souris ainsi que la coexistence de nombreuses espèces sympatriques, il est essentiel de déterminer comment les espèces utilisent et se partagent les ressources. Dans un premier temps, nous décrivons un peuplement de chauves-souris en forêt primaire de Guyane Française. Les facteurs locaux tels que la présence de gîtes particuliers comme les grottes, ou l'absence de perturbation anthropique ont une influence sur la structure et la composition des communautés. Au cours de cette étude, nous nous sommes concentrés sur les trois espèces les plus communes de chaque guilde végétarienne (frugivores de sous-bois, frugivores de canopée et nectarivores). Leur coexistence est possible grâce au partage des ressources alimentaires, de l'espace et/ou du temps. Au sein d'une même guilde, les plus petites espèces ont une bonne manoeuvrabilité et semblent occuper davantage les espaces fermés, moins attractifs pour leurs compétiteurs. Elles ont aussi un domaine vital plus petit que les grandes espèces. De même, le décalage des rythmes d'activités que nous avons observé, peut réduire la compétition entre les chauves-souris frugivores en diminuant les interférences directes lors de l'alimentation. En plus d'un intérêt pour l'écologie des communautés, cette étude décrivant des peuplements de chiroptères dans une forêt primaire intacte, peut servir de référence en biologie de conservation.
Revue d'écologie

hal-01032160
https://hal.archives-ouvertes.fr/hal-01032160

Éditeur(s) : HAL CCSD AGU and the Geochemical Society
Résumé : Geochemistry, Geophysics, Geosystems, v. 9, p. Q12001, 2008. http://dx.doi.org/10.1029/2008GC002098
International audience
Rb/Sr, 40Ar/39Ar, and Sm/Nd isotopic data are reported in Caledonian eclogites from the Lindås Nappe, Bergen Arcs, Norway, in order to investigate processes controlling isotopic equilibrium at mineral scale in polymetamorphic rocks. The Bergen Arcs exposes Sveconorwegian ∼950–930 Ma granulites, partially overprinted by Caledonian eclogite-facies metamorphism at ∼425 Ma and amphibolite-facies metamorphism at ∼410 Ma. Geochemical and Rb-Sr data from more than 10 phengite fractions separated from one sample reflect the composition of the microdomain (a few hundred microns in size) in which phengite crystallized. Phengite crystallized after garnet or plagioclase by dissolution-precipitation processes yield apparent age between 700 and 600 Ma. At the time of their crystallization, these phengites inherited the isotopic composition of their precursor minerals, at a microdomain scale. Phengite from quartz veins, which crystallized from elements mobilized by the circulating fluid, yield an age closer to the eclogite-facies metamorphic age. The closed system evolution of the eclogitizing fluid, the segregation of textural and reactional microdomains, the high Sr content of the studied phengite, and the short duration of the recrystallization processes (<1Ma) are interpreted as the main factors responsible for the lack of a Rb/Sr isotopic equilibrium, at the scale of hand samples. Such equilibrium is nevertheless reached in quartz veins where the crystallization of minerals implies that the fluid circulation acted as a factor of isotopic homogenization. The in situ single mineral Ar/Ar datings revealed that both eclogite- and amphibolite-facies minerals are characterized by an excess of radiogenic argon (ages between 425 and 520 Ma). The excess of argon has been inherited from the previous granulite and has been only partially evacuated from the system by the circulating fluid. The apparent Sm/Nd ages from garnets inherited from the granulite-facies metamorphism (c. 930 Ma) are in agreement with previous estimates. This result confirms that the diffusion of Nd in garnet does not occur at temperatures lower than 700°C. This study highlights the complexity of radiochronometer behavior during HP metamorphism and demonstrates that coupling different radiochronometers, such as Ar/Ar and Rb/Sr, does not always guarantee the validity of the geochronological results.
ISSN: 1525-2027

hal-00407885
https://hal.archives-ouvertes.fr/hal-00407885
DOI : 10.1029/2008GC002098

Éditeur(s) : Université des Antilles Études caribéennes
Résumé : Cet article discute du lien entre racisme, ségrégation ethnique et trafic de drogues illicites dans trois territoires caribéens caractérisés par une forte représentation des populations d'origine indienne et africaine : Trinidad, le Suriname et le Guyana. Pour des raisons historiques, ces territoires ont connu l'apparition relativement récente d'une classe d'entrepreneurs indo-caribéen prospère. D'un autre côté, pour les mêmes raisons, les populations d'origine afro-caribéennes y représentent l'essentiel de la classe pauvre urbaine. C'est sur cette base que s'est développé, à partir des années 1980, le trafic de cocaïne colombienne. D'où, dans la majorité des cas, une spécialisation ethnique des activités liées au trafic. A la base de la pyramide sociale, les jeunes Afro-caribéens des bidonvilles de Buxton (Guyana) ou de Laventille (Trinidad), par exemple, se retrouvent sur-représentés parmi les coupables de crimes commandités liés au trafic. Et émerge un discours raciste présentant les « noirs » comme plus enclin au crime...
This paper focus on an analysis of the relationship between racism, segregation and the illicit drug trade inside three Caribbean territories known for their large share of population of Indian and African origin: Trinidad, Suriname and Guyana. Because of historical reasons, those territories have known the recent growth of a wealthy Indo-Caribbean business class. On the other hand, for similar reasons, Afro-Caribbeans today represent most of the urban poor lower class. From the 1980's Colombian cocaine trafficking affected those territories; hence a drug trafficking activities' ethnical specialization. At the bottom of the pyramid, young Afro-Caribbeans are today overwhelmingly represented amongst perpetrators of crime linked to the traffic. Progressively a racist discourse tends here to present « blacks » as more prone to crime...
Guyana
Suriname
Trinité

Droits : info:eu-repo/semantics/openAccess
urn:doi:10.4000/etudescaribeennes.5334
http://journals.openedition.org/etudescaribeennes/5334

Éditeur(s) : Inter-research
Résumé : Chemical tracers (e. g. stable isotopes or trace metals) are increasingly used to study trophic ecology and feeding habits of marine organisms and various factors can affect their values. The aim of the present study was to provide information on ontogenic effects on stable carbon and nitrogen values (delta C-13 and delta N-15) and on cadmium (Cd) and mercury (Hg) concentrations in 5 cephalopod species from the Bay of Biscay (North-East Atlantic Ocean). To this end, individuals belonging to 3 species showing the widest range of sizes were analysed for muscle delta C-13 and delta N-15 values and muscle Hg, and digestive gland Cd concentrations. Results showed that stable isotope ratios allowed discrimination of specific feeding strategies during ontogenesis. Segregation between 5 cephalopod species in terms of trophic ecology was also evidenced (different isotopic niches). In contrast, Hg concentrations varied over the same order of magnitude in these 5 cephalopod species, despite higher levels in the benthic octopus Eledone cirrhosa. Consistently, Hg concentrations followed the same ontogenic pattern and increased with increasing body size/age of cephalopods. Finally, Cd concentrations varied over 3 orders of magnitude among the 5 species. Despite possible effects of physiology in terms of metal bioaccumulation, Cd concentrations were likely to reflect specific feeding preferences or feeding zones and ontogenic variability within a single species. Thus, ontogenic effects have to be taken into account when stable isotope ratios of carbon and nitrogen or trace metals are used as ecological tracers; the best recommendation being to focus on a given class age.
Marine Ecology Progress Series (0171-8630) (Inter-research), 2011 , Vol. 433 , P. 107-120

Droits : Inter-Research 2011 · www.int-res.com
http://archimer.ifremer.fr/doc/00166/27761/25938.pdf
DOI:10.3354/meps09159
http://archimer.ifremer.fr/doc/00166/27761/

Éditeur(s) : HAL CCSD
Résumé : Thrusting fault zone in foreland basins are characterized by highly foliated zones generally enriched in phyllosilicates which can play a major role on the mechanical behaviour of the fault. In this context, investigations of synkinematic clay minerals permit to determine the origin of the fluid from which they precipitated as well as the mechanisms of deformation. Our study is focused on clay mineral assemblages (illite and chlorite) in a major thrust fault located in the Monte Perdido massif (southern Pyrenees), a shallow thrust that affects upper cretaceous-paleocene platform carbonates and lower Eocene marls and turbidites. It implied 3 km of displacement of the Monte Perdido thrust unit with respect to the underlying Gavarnie unit. In this area the cleavage development by pressure-solution is linked to the Monte Perdido and Gavarnie thrust activity. The core zone of the fault, about 6 m thick, consists of an interval of intensely deformed clay-bearing rocks bounded by major shear surfaces. The deformed sediment is markedly darker than the protolith. Calcite-quartz shear veins along the shear planes are abundant. Detailed SEM and TEM observations of highly deformed fault zone samples indicate that clay mineral enrichment in the core zone of the fault is not only related to passive increase by pressure-solution mechanism but that dissolution-recrystallization of phyllosilicates occurs during deformation. A mineral segregation is observed in the highly deformed zone. Newly formed 2M 1 muscovite is present along the cleavage whereas IIb chlorite crystals fill SV2 shear veins suggesting syntectonic growth of phyllosilicates in the presence of fluids in low-grade metamorphic conditions. These mineralogical reactions act as weakening processes and would favour Monte Perdido fault creeping.
Swiss Journal of Geosciences

hal-00795553
https://hal.archives-ouvertes.fr/hal-00795553
DOI : 10.1007/s00015-012-0098-0

Éditeur(s) : Public Library Science
Résumé : Like hydrothermal vents along oceanic ridges, cold seeps are patchy and isolated ecosystems along continental margins, extending from bathyal to abyssal depths. The Atlantic Equatorial Belt (AEB), from the Gulf of Mexico to the Gulf of Guinea, was one focus of the Census of Marine Life ChEss (Chemosynthetic Ecosystems) program to study biogeography of seep and vent fauna. We present a review and analysis of collections from five seep regions along the AEB: the Gulf of Mexico where extensive faunal sampling has been conducted from 400 to 3300m, the Barbados accretionary prism, the Blake ridge diapir, and in the Eastern Atlantic from the Congo and Gabon margins and the recently explored Nigeria margin. Of the 72 taxa identified at the species level, a total of 9 species or species complexes are identified as amphi-Atlantic. Similarity analyses based on both Bray Curtis and Hellinger distances among 9 faunal collections, and principal component analysis based on presence/absence of megafauna species at these sites, suggest that within the AEB seep megafauna community structure is influenced primarily by depth rather than by geographic distance. Depth segregation is observed between 1000 and 2000m, with the middle slope sites either grouped with those deeper than 2000m or with the shallower sites. The highest level of community similarity was found between the seeps of the Florida escarpment and Congo margin. In the western Atlantic, the highest degree of similarity is observed between the shallowest sites of the Barbados prism and of the Louisiana slope. The high number of amphi-atlantic cold-seep species that do not cluster according to biogeographic regions, and the importance of depth in structuring AEB cold-seep communities are the major conclusions of this study. The hydrothermal vent sites along the Mid Atlantic Ridge (MAR) did not appear as "stepping stones" for dispersal of the AEB seep fauna, however, the south MAR and off axis regions should be further explored to more fully test this hypothesis.
Plos One (1932-6203) (Public Library Science), 2010-08 , Vol. 5 , N. 8 , P. 1-11

Droits : © 2010 Olu et al.
http://archimer.ifremer.fr/doc/00011/12207/8975.pdf
DOI:10.1371/journal.pone.0011967
http://archimer.ifremer.fr/doc/00011/12207/

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Interactions between deformation and melt percolation yield important consequences for the evolution of the mantle lithosphere, controlling its composition and mechanical behavior. In the Lherz massif (Pyrenees, France), the analysis of structural relationships between harzburgites, lherzolites and pyroxenites and of the crystal-preferred orientations (CPO) of olivine and pyroxenes highlights a strong feedback between percolation of basaltic melts and deformation under near-solidus conditions at the lithosphere–asthenosphere boundary. Elongated harzburgite bodies up to tens of meters wide, which are the remnants of an old lithospheric mantle, preserve a constant foliation. This foliation is locally outlined by cm-scale flattened websteritic lenses. At the contact with the enclosing lherzolites, the harzburgite foliation is crosscut by the lherzolites foliation and by cm-wide websterite bands parallel to the contact. Strain intensity in the lherzolites increases with distance to the harzburgites. Based on these observations, we propose that reactive percolation was synchronous to the deformation and propose that variations in instantaneous melt fraction, due to pyroxenes and spinel crystallization during reactive melt transport, guided strain localization. Accordingly, the observed decrease in olivine CPO intensity and change in CPO patterns from harzburgites to distal lherzolites are interpreted as recording changes in the relative contribution of dislocation glide and diffusion processes, which is ruled by a balance between the instantaneous melt fraction and the local strain rate. We also propose that the pervasive websteritic layering in the refertilized lherzolites may result from deformation-assisted melt segregation in a system with decreasing permeability due to refertilization reactions. Finally, we discuss the possible timing and geodynamical context of the refertilization episode.
ISSN: 0012-821X

hal-00411724
https://hal.archives-ouvertes.fr/hal-00411724
DOI : 10.1016/j.epsl.2008.07.053

Éditeur(s) : HAL CCSD
Résumé : Differentiation of the lithospheric mantle occurred principally through partial melting and extraction of melts. Harzburgites are generally considered as melting residues whereas lherzolites are regarded as pristine mantle weakly affected by melting. However, some orogenic peridotites show evidence of igneous refertilization. In this context, this work re-investigates the nature of the Lherz lherzolites (Pyrenees), type-locality of lherzolites, described as a piece of preserved fertile mantle. Structural and geochemical data show that these lherzolites are not pristine but formed through a refertilization reaction between MORB-like melts and refractory lithosphere. Moreover, the Lherz peridotites were partly used to infer the composition of the primitive upper mantle and these results may have important implications for the nature of the late veneer. Additionally, crystal-preferred orientations of minerals (CPO) highlight a strong feedback between melt percolation and finite strain in the percolated rocks. CPO variations are ruled by a subtle balance between instantaneous melt fraction and local strain rate. This work also investigated the effect of melt percolation on Hf, Nd and Sr isotopes. Isotope systematics in Lherz shows that strong isotopic decoupling may arise in a percolation front. The modelling suggests that decoupled isotopic signatures are generated during porous flow and governed by the melt/matrix elements concentrations, chemical diffusivities or efficiency of isotopic homogenization. Melt-rock interactions can generate “intraplate-like” isotopic signatures. This suggests that a part of isotopic signatures of mantle-related rocks could be generated by diffusional processes associated with melt transport.
La différenciation du manteau lithosphérique s'est principalement effectuée par fusion partielle et extraction de magmas. Les harzburgites sont généralement considérées comme des résidus de fusion tandis que les lherzolites représentent un manteau originel peu affecté par la fusion. Cependant, certaines péridotites orogéniques montrent des évidences de refertilisation magmatique. Dans ce contexte, ce travail remet en cause la nature primitive des lherzolites de Lherz (Pyrénées), lithotype de la lherzolite. Les données structurales et géochimiques montrent que ces lherzolites ne représentent pas du manteau préservé mais qu'elles se sont formées par une réaction de refertilisation entre un liquide de type MORB et une lithosphère réfractaire. De plus, les orientations préférentielles de réseau (OPR) des minéraux montrent une forte interdépendance entre la percolation magmatique et la déformation finie observée dans les roches percolées. Les variations d'OPR semblent contrôlées par un équilibre subtil entre fraction de liquide instantanée et taux de déformation local. Ce travail a également abordé les effets de la percolation magmatique sur la variabilité isotopique des roches mantelliques. Les résultats montrent qu'un fort découplage isotopique peut s'observer dans un front de percolation. Les modèles suggèrent que le découplage des signatures isotopiques se produit pendant la percolation, gouverné par le rapport des concentrations en éléments (magma/matrice), la diffusivité et le processus d'homogénéisation isotopique. Les réactions magma/roche peuvent générer des signatures isotopiques de type intraplaque. Ceci suggère qu'une part des signatures isotopiques des roches ou laves dérivées du manteau pourrait être produite par des processus diffusionnels associés à du transport de magma.
https://tel.archives-ouvertes.fr/tel-00431325

tel-00431325
https://tel.archives-ouvertes.fr/tel-00431325
https://tel.archives-ouvertes.fr/tel-00431325/document
https://tel.archives-ouvertes.fr/tel-00431325/file/theseleroux08.pdf

Éditeur(s) : HAL CCSD Ibis Rouge Editions
Résumé : International audience
La liaison entre les villes de la Caraïbe et la mer semble banale et évidente. Le Malécon de La Havane, ce long boulevard battu par les vagues, haut lieu de sociabilité, ou encore la vieille ville de San Juan de Puerto Rico sont les modèles des liens qu’entretiennent les grandes villes antillaises et la mer.Pourtant les contre-exemples sont tout aussi nombreux. A Port-au-Prince, le bord de mer est devenu au fil des années de misère le dépotoir d’une ville incontrôlable. Dans les Petites Antilles, les fronts de mer s’artificialisent et se séparent des villes par des parkings, des boulevards et des enrochements ou des murs de protection comme à Roseau. Les nouveaux bassins portuaires et les nouvelles zones industrialo-portuaires sont construits en périphérie des capitales insulaires. Les fronts de mer connaissent donc depuis 20 ans des dynamiques territoriales spécifiques entre éloignement et réintégration dans les centres-villes, entre paupérisation et gentrification.Après avoir rappelé le temps de la fusion entre les villes et la mer, nous analyserons les causes de l’éloignement des ports et les formes d’occupation du littoral durant les années 1970. Les phénomènes de réhabilitation de certaines fonctions portuaires ciblées, essentiellement axées vers le tourisme de croisière et les phénomènes de gentrification qui les accompagnent permettront de dégager les nouvelles perspectives d’aménagement des fronts de mer.
Mélanges offerts à Lucien Abenon, Sur les chemins de l’histoire antillaise

hal-01202988
https://hal.archives-ouvertes.fr/hal-01202988

Éditeur(s) : HAL CCSD Wiley
Résumé : International audience
CP12 is a small chloroplast protein involved in the Benson-Calvin cycle. Since it was demonstrated that the CP12 protein shared different conformational properties between reduced and oxidized states we took advantage of the segregational properties of the Traveling Wave Ion Mobility (TWIM) guide to study subtle conformational changes related to redox changes. Electrospray ionization mass (ESI-MS) spectra of the CP12 protein were recorded in the positive ion mode using an ESI source fitted on a quadrupole time-of-flight (QToF) hybrid mass spectrometer equipped with a TWIM cell (Synapt HDMS G1, Waters Corp., Manchester) under non-denaturing conditions. Non-covalent experiments were performed using the same instrument without the use of the TWIM device. Whatever the CP12 form studied, our results showed that CP12 protein was represented by two conformers in equilibrium that displayed very slight differences. These observations led us to propose that CP12 protein structure is rather undergoing transient subtle structural changes than having two different conformational populations in solution. In addition, using non-denaturing experiments, NAD and CP12 stoichiometry were determined with respect to the GAPDH tetramer and the redox state of CP12. In this study we showed that the use of the segregational property of the ion mobility (TWIM, Synapt G1 HDMS, Waters, Manchester, UK) allowed differentiation of subtle conformational changes between redox states of the CP12 protein. Standard non-denaturing experiments revealed different binding stoichiometry according to the redox state of the CP12 protein.
ISSN: 0951-4198

hal-01122181
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01122181
DOI : 10.1002/rcm.6442
PUBMED : 23239332

Éditeur(s) : HAL CCSD BioMed Central
Résumé : International audience
Background: Ovarian failure (OF) is considered premature if it occurs before the age of 40. This study investigates the genetic aetiology underlying OF in women under the age of 40 years. Methods: We conducted an experimental prospective study performing all genome microarrays in 60 patients younger than 40 years presenting an OF revealed by a decrease of circulating Anti-Mullerian Hormone (AMH) and leading to an oocyte donation program. Results: We identified nine significant copy number variations (CNVs) including candidate genes potentially implicated in reproductive function. These genes are principally involved in cell division and chromosome segregation (SYCE1, CLASP1, CENP-A, CDC16), in ciliary development and/or function (RSPH1, KIF24), are linked with known gonadal genes or expressed in female genital tract (CSMD1, SEMA6D, KIAA1324). Conclusions: Our data strengthen the idea that microarrays should be used in combination with karyotype for aetiological assessment of patients with OF. This analysis may have a therapeutic impact as the identification of new molecular actors for gonadal development or ovarian physiology is useful for the prediction of an ovarian reserve decline and makes possible preventive fertility preservation.
ISSN: 1757-2215

hal-01390979
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01390979
DOI : 10.1186/s13048-016-0272-5
PUBMED : 27716277

Éditeur(s) : HAL CCSD Cold Spring Harbor Laboratory Press
Résumé : International audience
Meiotic recombination is required for the segregation of homologous chromosomes and is essential for fertility. In most mammals, the DNA double-strand breaks (DSBs) that initiate meiotic recombination are directed to a subset of genomic loci (hot spots) by sequence-specific binding of the PRDM9 protein. Rapid evolution of the DNA-binding specificity of PRDM9 and gradual erosion of PRDM9-binding sites by gene conversion will alter the recombination landscape over time. To better understand the evolutionary turnover of recombination hot spots and its consequences, we mapped DSB hot spots in four major subspecies of Mus musculus with different Prdm9 alleles and in their F1 hybrids. We found that hot spot erosion governs the preferential usage of some Prdm9 alleles over others in hybrid mice and increases sequence diversity specifically at hot spots that become active in the hybrids. As crossovers are disfavored at such hot spots, we propose that sequence divergence generated by hot spot turnover may create an impediment for recombination in hybrids, potentially leading to reduced fertility and, eventually, speciation
ISSN: 0890-9369

hal-01281480
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01281480
DOI : 10.1101/gad.270009.115
PUBMED : 26833728

Éditeur(s) : Wiley-blackwell Publishing, Inc
Résumé : Seagrasses structure some of the world's key coastal ecosystems presently in decline due to human activities and global change. The ability to cope with environmental changes and the possibilities for shifts in distribution range depend largely on their evolvability and dispersal potential. As large-scale data usually show strong genetic structure for seagrasses, finer-grained work is needed to understand the local processes of dispersal, recruitment and colonization that could explain the apparent lack of exchange across large distances. We aimed to assess the fine-grained genetic structure of one of the most important and widely distributed seagrasses, Zostera marina, from seven meadows in Brittany, France. Both classic population genetics and network analysis confirmed a pattern of spatial segregation of polymorphism at both regional and local scales. One location exhibiting exclusively the variety 'angustifolia' did not appear more differentiated than the others, but instead showed a central position in the network analysis, confirming the status of this variety as an ecotype. This phenotypic diversity and the high allelic richness at nine microsatellites (2.33-9.67 alleles/locus) compared to levels previously reported across the distribution range, points to Brittany as a centre of diversity for Z. marina at both genetic and phenotypic levels. Despite dispersal potential of several 100 m, a significant pattern of genetic differentiation, even at fine-grained scale, revealed 'genetic patchiness'. Meadows seem to be composed of a mosaic of clones with distinct origins in space and time, a result that calls into question the accuracy of the concept of populations for such partially clonal species.
Molecular Ecology (0962-1083) (Wiley-blackwell Publishing, Inc), 2010-06 , Vol. 19 , N. 12 , P. 2394-2407

Droits : 2010 Blackwell Publishing Ltd
http://archimer.ifremer.fr/doc/00006/11690/8499.pdf
DOI:10.1111/j.1365-294X.2010.04649.x
http://archimer.ifremer.fr/doc/00006/11690/

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Melting experiments were performed on a silica-rich peridotite composition at 10-17 GPa to determine majoritic garnet-melt partition coefficients (D) for major and trace elements. Our results show that D for many elements, including Na, Sc, Y and rare earth elements (REE), varies significantly with increasing pressure or proportion of majorite component. Lu and Sc become incompatible at 17 GPa, with D decreasing from 1.5 at 10 GPa to 0.9 at 17 GPa. As predicted from lattice strain, log D for isovalent cations entering the large site of majoritic garnet exhibits a near-parabolic dependence on ionic radius. Our data are used to refine a previously published predictive model for garnet-melt partitioning of trivalent cations, which suffered from a lack of calibration in the 10-20 GPa range. Our results suggest that Archean Al-depleted komatiites from Barberton (South Africa) may have been generated by partial melting of dry peridotite at depths between 200 and 400 km. We also speculate that transition zone diamonds from Kankan (Guinea), which contain inclusions of majoritic garnet, may have formed from the partial reduction of CO2-rich magmas that subsequently transported them to the surface. This hypothesis would provide an explanation for the REE patterns of majoritic garnet trapped within these diamonds, including Eu anomalies. Finally, we show that segregation of majoritic garnet-bearing cumulates during crystallisation of a deep Martian magma ocean could lead to a variety of Lu/Hf and Sm/Nd ratios depending on pressure, leading to a range of ε143Nd and ε176Hf isotope signatures for potential mantle sources of Martian rocks.
ISSN: 0024-4937

hal-00767567
https://hal.archives-ouvertes.fr/hal-00767567
DOI : 10.1016/j.lithos.2012.06.013

Éditeur(s) : HAL CCSD
Résumé : International audience
The active selection of recent volcanic habitats by juvenile fish following a cyclone could explain the unusual mass-settlement of the Indian Ocean blacktip grouper Epinephelus oceanicus observed on 25 May 2006, few weeks after tropical storm Diwa on the latest lava flows of the Piton de la Fournaise volcano at Reunion Island. Following a cyclonic depression, shallow underwater habitats are devoid of resident fishes, including predators, favouring juvenile fish survival. Otherwise, the recent origin of the volcanic habitats, which vary in age, could facilitate the spatial segregation of adult and juvenile fish on the lava flows, reducing intraspecific competition and adult aggression toward juveniles. Regional characteristics of larval recruitment could also contribute to the infrequency of the described event; the isolated situation of the island would be expected to result in an average density of fish postlarvae 0.25 % to 1 % of that seen on some reefs in the Pacific. The supposed origin of juvenile groupers in the neighbouring island of Mauritius should encourage Reunionese managers to look beyond their own jurisdictions to adopt a collaborative approach to conservation of the entire connected network.
Environmental Biology of Fishes

hal-01306707
http://hal.univ-reunion.fr/hal-01306707
http://hal.univ-reunion.fr/hal-01306707/document
http://hal.univ-reunion.fr/hal-01306707/file/Mass-settlement%20of%20the%20Indian%20ocean%20black-tip%20grouper_hal.pdf
DOI : 10.1007/s10641-014-0303-2

Éditeur(s) : HAL CCSD Oxford University Press (OUP)
Résumé : International audience
About 1-6% of the genetic ancestry of modern humans today originates from admixture with archaic humans. It has recently been shown that autosomal genomic regions with a reduced proportion of Neanderthal and Denisovan ancestries (NA and DA) are significantly enriched in genes that are more expressed in testis than in other tissues. To determine whether a cellular segregation pattern would exist, we combined maps of archaic introgression with a cross-analysis of three transcriptomic datasets deciphering the transcriptional landscape of human gonadal cell types. We reveal that the regions deficient in both NA and DA contain a significant enrichment of genes transcribed in meiotic germ cells. The interbreeding of anatomically modern humans with archaic humans may have introduced archaic-derived alleles that contributed to genetic incompatibilities affecting meiosis that were subsequently purged by natural selection.
ISSN: 0737-4038

hal-01578587
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01578587
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01578587/document
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01578587/file/J%C3%A9gou%20et%20al%20-%20Meiotic%20Genes%20Are%20Enriched.pdf
DOI : 10.1093/molbev/msx141

Éditeur(s) : HAL CCSD Nature Publishing Group
Résumé : International audience
The etiology of congenital heart defect (CHD) combines environmental and genetic factors. So far, there were studies reporting on the screening of a single gene on unselected CHD or on familial cases selected for specific CHD types. Our goal was to systematically screen a proband of familial cases of CHD on a set of genetic tests to evaluate the prevalence of disease-causing variant identification. A systematic screening of GATA4, NKX2-5, ZIC3 and Multiplex ligation-dependent probe amplification (MLPA) P311 Kit was setup on the proband of 154 families with at least two cases of non-syndromic CHD. Additionally, ELN screening was performed on families with supravalvular arterial stenosis. Twenty-two variants were found, but segregation analysis confirmed unambiguously the causality of 16 variants: GATA4 (1 x), NKX2-5 (6 x), ZIC3 (3 x), MLPA (2 x) and ELN (4 x). Therefore, this approach was able to identify the causal variant in 10.4% of familial CHD cases. This study demonstrated the existence of a de novo variant even in familial CHD cases and the impact of CHD variants on adult cardiac condition even in the absence of CHD. This study showed that the systematic screening of genetic factors is useful in familial CHD cases with up to 10.4% elucidated cases. When successful, it drastically improved genetic counseling by discovering unaffected variant carriers who are at risk of transmitting their variant and are also exposed to develop cardiac complications during adulthood thus prompting long-term cardiac follow-up. This study provides an important baseline at dawning of the next-generation sequencing era.
ISSN: 1018-4813

hal-01404211
https://hal-univ-bourgogne.archives-ouvertes.fr/hal-01404211
DOI : 10.1038/ejhg.2015.105
PUBMED : 26014430

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : International audience
Myrmecophytism occurs in plants that offer ants a nesting space and, often, food rewards in exchange for protection from predators and competitors. Such biotic protection by ants can, however, interfere with the activity of pollinators leading to potential negative consequences for the plant’s reproduction. In this study, we focused on the association between the understory myrmecophyte, Hirtella physophora (Chrysobalanaceae), and its obligate ant partner, Allomerus decemarticulatus (Myrmicinae). We investigated the reproductive biology of H. physophora and the putative mechanisms that may limit ant–pollinator conflict. Our results show that H. physophora is an obligate outcrosser, self-incompatible, and potentially insect-pollinated species. The reproduction of H. physophora relies entirely on pollen transfer by pollinators that are likely quite specific. Potential interference between flower-visiting insects during pollination may also be lessened by a spatial and temporal segregation of ant and pollinator activities, thus enabling pollen transfer and fruit production.
ISSN: 1872-8855

hal-01140817
https://hal-sde.archives-ouvertes.fr/hal-01140817
DOI : 10.1007/s11829-014-9352-x

Éditeur(s) : HAL CCSD Oxford University Press (OUP)
Résumé : International audience
Mantle-derived xenoliths hosted by melilitite lavas from In Teria (Ahaggar, SE Algeria) include garnet and spinel peridotites, pyroxenite and phlogopite megacrysts. The spinel and garnet peridotites record an early deformation event, which formed porphyroclastic microstructures and olivine crystal preferred orientations, followed by static infiltration of hydrous alkaline melts. This metasomatic stage (stage 1) is characterized by the crystallization of phlogopite in the garnet and spinel peridotites, amphibole in the spinel peridotites and clinopyroxene in the garnet peridotite, which record chemical equilibration with an alkaline silicate melt. These early events were largely overprinted by carbonatitic metasomatism (stage 2), which is observed only in the spinel peridotites. Spinel peridotite major and trace element compositions, as well as the compositions of newly formed minerals, are characteristic of interaction with carbonate melt, associated with strong enrichment in incompatible trace elements in clinopyroxene. This second stage was followed by crystallization of pyroxenites (stage 3) in vein conduits, probably segregated from alkaline melts. We propose a scenario in which the different metasomatic imprints record successive stages of interaction between lithospheric mantle and sublithospheric melts throughout the Cenozoic. In Sr–Nd isotope space, the host melilitites and several xenoliths are clustered and plot close to the HIMU mantle end-member. However, some peridotite xenoliths are shifted towards more radiogenic 87Sr/86Sr values. In 207Pb/204Pb–206Pb/204Pb and 208Pb/204Pb–06Pb/204Pb space the In Teria samples define a relatively large domain characterized by high 206Pb/204Pb and 208Pb/204Pb, consistent with a contribution of an HIMU component, considered to represent a sublithospheric signature. The highest 87Sr/86Sr values are comparable with those ascribed to the EM1 mantle end-member, representing the signature of the lower continental lithosphere, and are probably inherited from the pre-metasomatic lithospheric mantle beneath In Teria. Numerical modelling of porous percolation of melt of sublithospheric origin through an EM1-like lithospheric mantle protolith reproduces the In Teria peridotite compositions, using moderately sub-chondritic Sr/Nd values for the peridotite (e.g. In Teria garnet peridotite) and moderately super-chondritic Sr/Nd values in the melt (approximately ocean island basalt values). A few spinel peridotites require a component characterized by a 143Nd/144Nd signature higher than both the EM1 end-member and the local Ahaggar basalts; the 208Pb/204Pb compositions of several samples point to a component with a depleted mid-ocean ridge basalt (MORB) mantle (DMM) signature. Thus the lithospheric mantle beneath In Teria probably did not have a uniform EM1 signature before the onset of metasomatism; it included a DMM peridotite component as well as some peridotites with elevated 143Nd/144Nd values recording long-term LREE depletion.
ISSN: 0022-3530

hal-01356781
https://hal.archives-ouvertes.fr/hal-01356781
DOI : 10.1093/petrology/egw009