Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Geochronological studies of samples from continuous crustal sections of fossil intra-oceanic arcs are paramount for determining the precise timing of major processes that took place during the building of an oceanic island-arc crust. In this study, laser ablation ICP-MS U-Pb zircon (and conventional Rb-Sr) analyses pinpoint the timing of major events responsible for crustal growth of the Kohistan paleo-island arc (Northern Pakistan). Inheritance in magmatic rocks is evidence for recycling of intra-arc material and indicates that the Kohistan arc may have formed as early as 135 +/- 4 Ma. One older inherited grain indicates that the arc developed on a young oceanic lithosphere whose remnants include a c. 175 Ma old component. An interesting consequence is that intra-oceanic arc magmas can yield inherited zircons, which can be much older than the arc system itself without requiring recycling back into the mantle by subduction processes. In the case of the Kohistan arc, ante-arc Neotethys oceanic lithosphere was tapped by arc magmas during their way upward into the arc crust. The oldest magmatic ages measured in this study fall in the range 101-102 Ma (100.9 +/- 0.6 and 102.1 +/- 0.4 Ma). This period corresponds to arc build-up and thickening of the arc crust. Leucogranitic melts dated at 89.9 +/- 0.4 Ma and 90.9 +/- 1.0 Ma are considered as produced by dehydration/melting reaction accompanying granulitisation of the thickened lower arc crust. A maximum age for this event is 97.7 +/- 0.7 Ma, the age of emplacement of a garnet meta-tonalite affected by granulite facies metamorphism. Magmatic activity was still ongoing during and after the granulitisation as testified by emplacement of a diorite and a gabbro dated at 89.1 +/- 0.6 and 88.2 +/- 0.9 Ma respectively. The upper part of the metaplutonic sequence contains diorite samples dated at 84.6 +/- 0.5 Ma and 84.3 +/- 0.5 Ma and as young as 81.1 +/- 0.7 Ma. During this period, and based on the present day outcropping sequences, the mean crustal growth rate varied from 32 to 65 km(3)/km/Ma (volume per unit width along the strike of the arc) which is comparable to the range for present day arcs of the Western Pacific region. The correspondence of crustal growth rates observed for present-day island arcs and the good preservation of the crustal section in the Kohistan arc, make this area an exceptional natural laboratory to study arc related processes and to check models of continental crust formation by arc accretion.
ISSN: 0012-821X

hal-00644555
https://hal.archives-ouvertes.fr/hal-00644555
DOI : 10.1016/j.epsl.2011.07.016

Éditeur(s) : Elsevier
Résumé : The gametogenic cycle and the reproductive effort of the blacklip pearl oyster, Pinctada margaritifera, cultivated in Takapoto lagoon were studied for a 1-year period (March 1997-April 1998) by bimonthly observations of gonadal sections, dry tissue weights and gonadal index in a population of pearl oyster composed of three age-groups. pearl oysters attained sexual maturity in the end of their first year (height approximate to 40 mm), implying that P. margaritifera is a late-maturing species in comparison with other Pteriidae. This species was also confirmed to be a marked protandrous successive hermaphrodite in culture, with 100 % of males at first maturity and 75 % in older pearl oyster (height > 120 mm). The general pattern of gametogenic activity, fairly synchronous in both sexes, was comparable with that of other tropical bivalves: reproduction occurs continuously throughout the year with a maximal activity during the warm season (November-May). No resting period was observed. Quantitative growth data showed that P. margaritifera exhibits an annual synchronised polymodal spawning pattern, with two spawning peaks in age-group I (height approximate to 70 mm) and five in age-groups II (height approximate to 100 mm) and III (height approximate to 120 mm). Spawning was sometimes incomplete, nevertheless a clear relationship between gamete production (P-R, g) and size (height H, mm) was obtained: P-R = 5.26 x 10(-7) H-2.91 (R-2 = 0.99, p < 0.05). Estimation of P-R was used to calculate the annual reproductive effort in P. margaritifera. Reproductive effort (%) was similar to those calculated for temperate species and showed a progressive increase with the age of pearl oyster, from 7 % in age-group I to 38 % in age-group III. This study showed that, in a fairly stable tropical environment such as the Takapoto lagoon, P. margaritifera is a multiple spawner, which uses an opportunistic reproductive strategy, allowing investment all year around, of any surplus energy into gamete production. Surplus energy is ensured by the high pumping rates developed by this non-symbiotic bivalve to succeed in low seston conditions. (C) 2000 Ifremer/Cnrs/Inra/Ird/Cemagref/Editions scientifiques et medicales Elsevier SAS.
Le cycle et l'effort de reproduction de l'huître perlière à lèvres noires, Pinctada margaritifera, cultivée dans le lagon de Takapoto, ont été étudiés sur une période annuelle (de mars 1997 à avril 1998), par un suivi bimensuel des stades de maturation et des indices gonadiques, sur une population en élevage composée de trois groupes d'âge (1, 2 et 3 ans). Cette étude a confirmé que P. margaritifera est une espèce qui se reproduit tardivement par rapport aux autres Ptériidés (elle atteint sa maturité sexuelle à la fin de sa première année, pour une hauteur approximative de 40 mm). Par ailleurs, elle présente, en élevage, une protandrie marquée (100 % de mâles à première maturité, 75 % pour des huîtres âgées de trois ans). Le schéma général de sa gamétogenèse, relativement synchrone dans les deux sexes, est comparable à celui des autres bivalves tropicaux : la reproduction est quasiment continue (aucune période de repos sexuel) avec une activité accrue en saison chaude (de novembre à mai). L'analyse des variations du poids de la gonade suggère l'existence de deux pics d'émission de gamètes chez les huîtres de un an et cinq pics chez les huîtres de 2 et 3 ans (cycle de reproduction de type polymodal). Bien que ces émissions de gamètes soient parfois incomplètes, une relation entre la production de gamètes (PR, en g) et la taille de l'huître perlière (hauteur, H, en mm) a été établie : PR = 5,26 x 10-7 H2,91 (R2 = 0,99, p < 0,05). Ces résultats ont permis de calculer l'effort de reproduction de P. margaritifera à Takapoto et sur un bilan annuel : il augmente avec l'âge de l'huître perlière de 7 % pour le groupe d'âge I à 38% pour le groupe d'âge III. Ces valeurs annuelles sont similaires à celles calculées chez les bivalves de milieux tempérés. Cette étude a donc montré que, dans un environnement tropical assez stable tel que celui du lagon de Takapoto, P. margaritifera présente une reproduction continue, avec plusieurs pics d'émission de gamètes par an. Cette stratégie « opportuniste » permet l'investissement, de tout surplus d'énergie en production de gamètes, tout au long de l'année. Malgré la faible concentration du milieu en nourriture, ces surplus d'énergie sont assurés par les fortes capacités de filtration développées par cette espèce tropicale non-symbiotique.
Aquatic Living Resources (0990-7440) (Elsevier), 2000 , Vol. 13 , N. 1 , P. 37-48

Droits : 2000 Ifremer/Cnrs/Inra/Ird/Cemagref/Éditions scientifiques et médicales Elsevier SAS
http://archimer.ifremer.fr/doc/2000/publication-1391.pdf
DOI:10.1016/S0990-7440(00)00135-2
http://archimer.ifremer.fr/doc/00000/1391/

Éditeur(s) : HAL CCSD Ecological Society of America
Résumé : We investigated the relationship between habitat association and physiological performance in four congeneric species pairs exhibiting contrasting distributions between seasonally flooded and terra firme habitats in lowland tropical rain forests of French Guiana, including Virola and Iryanthera (Myristicaceae), Symphonia (Clusiaceae), and Eperua (Caesalpiniaceae). We analyzed 10-year data sets of mapped and measured saplings (stems 150 cm in height and <10 cm diameter at breast height [dbh]) and trees (stems 10 cm dbh) across 37.5 ha of permanent plots covering a 300-ha zone, within which seasonally flooded areas (where the water table never descends below 1 m) have been mapped. Additionally, we tested the response of growth, survival, and leaf functional traits of these species to drought and flood stress in a controlled experiment. We tested for habitat preference using a modification of the torus translation method. Strong contrasting associations of the species pairs of Iryanthera, Virola, and Symphonia were observed at the sapling stage, and these associations strengthened for the tree stage. Neither species of Eperua was significantly associated with flooded habitats at the sapling stage, but E. falcata was significantly and positively associated with flooded forests at the tree stage, and trees of E. grandiflora were found almost exclusively in nonflooded habitats. Differential performance provided limited explanatory support for the observed habitat associations, with only congeners of Iryanthera exhibiting divergent sapling survival and tree growth. Seedlings of species associated with flooded forest tended to have higher photosynthetic capacity than their congeners at field capacity. In addition, they tended to have the largest reductions in leaf gas exchange and growth rate in response to experimental drought stress and the least reductions in response to experimental inundation. The corroboration of habitat association with differences in functional traits and, to a lesser extent, measures of performance provides an explanation for the regional coexistence of these species pairs. We suggest that specialization to seasonally flooded habitats may explain patterns of adaptive radiation in many tropical tree genera and thereby provide a substantial contribution to regional tree diversity.
ISSN: 0012-9658

hal-01031746
https://hal.archives-ouvertes.fr/hal-01031746

Éditeur(s) : HAL CCSD
Résumé : The forests of French Guiana occupy a central part of the region’s potential resource base, but as yet remain almost completely unexploited. This stems from the forestry industry struggling to valorize wood stocks of a high diversity with an extremely heterogeneous distribution. Indeed, identifying essences for future propagation is an issue of both environmental and socio-economic importance for the region. Bagassa guianensis Aubl. and Cordia alliodora (Ruiz & Pav.) Oken. go against conventional models, in that they display the life history characteristics of rapid growth and wood of high quality, and thus are species of high potential for future plantations. Firstly, our study of growth characteristics reveals a defined strategy half way between long-lived species and pioneer species. It is the variability of basic density of wood which is a key trait allowing for such a development, favoring rapid growth in initial years whilst allowing for tree longevity. Secondly, the analysis of a range of wood properties (shrinkage, modulus of elasticity, durability) in relation to tree growth confirms the technologic quality of the two species. It also enables the emergence of new results like the effect of extractives on wood stability, the control of growth as a result of basic density variation, the evolution of leaf traits throughout tree development or the improvement of trunk maintenance thanks to interlocked grain. The knowledge gained in relation to the developmental traits of these two species, and to the quality of their wood allows for the elaboration of plantation projects and what will be required for their success. The results of this study can orientate future studies on novel species for commercialization in French Guiana.
La ressource forestière en Guyane occupe une place maîtresse au sein de la région et est encore majoritairement préservée, mais la filière bois parvient difficilement à valoriser la biodiversité locale en raison de l’hétérogénéité de la ressource. Identifier les essences à planter demain représente aujourd’hui un enjeu à la fois environnemental, économique et social pour la Guyane. Bagassa guianensis Aubl. et Cordia alliodora (Ruiz & Pav.) Oken. vont à l’encontre des modèles usuels en associant vitesse de croissance et qualité du bois et sont identifiées comme prometteuses pour la plantation. Dans un premier temps, l’étude de la dynamique de croissance des deux espèces révèle un modèle écologique singulier, à la fois pionnières et longévives. La variabilité de l’infradensité dans l’arbre est l’élément clé qui permet un tel développement, favorisant une croissance rapide dans les premières années tout en assurant la longévité de l’individu. Dans une seconde partie, l’analyse d’un large panel de propriétés du bois (retrait, module, durabilité) en lien avec le développement de l’arbre confirme les qualités technologiques des deux espèces et permet l’émergence de résultats novateurs tels que le rôle des extractibles sur le retrait, le contrôle de la croissance grâce aux variations d’infradensité, l’évolution des traits foliaires au cours de l’ontogénie ou encore la mise en place de contrefil dans l’arbre pour assurer son maintien. La connaissance acquise vis-à-vis du mode de développement de ces deux espèces et des facteurs influençant la qualité de leur bois permet aujourd’hui de définir avec plus de précision le cadre d’un projet de plantation et les conditions de son succès. Les résultats de cette étude permettent finalement d’orienter la recherche de nouvelles espèces d’avenir pour la plantation en Guyane.
https://tel.archives-ouvertes.fr/tel-01430243

Droits : info:eu-repo/semantics/OpenAccess
NNT : 2015YANE0002
tel-01430243
https://tel.archives-ouvertes.fr/tel-01430243
https://tel.archives-ouvertes.fr/tel-01430243/document
https://tel.archives-ouvertes.fr/tel-01430243/file/julie-bossu.pdf

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Crystal growth driven by a flowing solution is modeled for a flow with low Reynolds number using a computational dynamic software. Considering equivalent crystallographic faces, the chemical flux is calculated along upstream and downstream faces. Upstream flux is higher compared to downstream and leads to a symmetry breakdown of the crystal shape and develops mirror symmetry parallel to the flow velocity. Moreover the ratio of these two fluxes (upstream / downstream) gives a quantitative relation between the relative crystal growth rate and the flow velocity. Thus, using an inverse method, the flow direction and velocity can be deduced by the study of the variation of the growth band thicknesses of equivalent crystallographic faces. This new method was applied to the formation of metasomatic tourmalinite associated with a leucogranite sill. The approach is complemented by a study of the chemistry of the tourmaline. In the studied case, the application of the new method gives the high fluid velocities in pores (10-3 - 10-4 m/s) during metasomatism. Equivalent Darcy velocities are estimated and discussed accounting for the major role played by the regional deformation. Finally, a two-stage tectono-hydrodynamic model is proposed for the metsomatism. The first stage is genetically linked to the sill injection, and the second is characterized by a wider event with hydrothermal flow passing along the leucogranite sills.
ISSN: 0012-821X

Droits : info:eu-repo/semantics/OpenAccess
insu-00352307
https://hal-insu.archives-ouvertes.fr/insu-00352307
https://hal-insu.archives-ouvertes.fr/insu-00352307/document
https://hal-insu.archives-ouvertes.fr/insu-00352307/file/Sizaret_et_al_final.pdf
DOI : 10.1016/j.epsl.2009.01.013

Éditeur(s) : Elsevier Science Bv
Résumé : During the Echolag cruise (13 February-8 March 2007), the effect of 16-30 knot trade winds on abundance, community structure and dynamics of phytoplankton was investigated in the southern part of the New Caledonian coral reefs and surrounding oceanic waters. In this area, the coral reefs form two horn-like structures (hereinafter referred to as 'horn reefs'), oriented south-east, and separated by a relatively deep valley. Three repeated samplings at one week intervals of a 32 station array showed that trade winds induce surface water cooling and significant enrichment of mid- and bottom waters above the reef shelf. This enrichment appeared as the result of a general rise of the oceanic thermocline and nitracline due to the combination of trade winds and tidally-generated internal waves between the horn reefs. It was accompanied by a factor of 1.5 and 2.3 mean increase for the chlorophyll concentration and picoplankton-nanoplankton cell number, respectively. From diel variations of in vivo chlorophyll a fluorescence and hourly sampling, phytoplankton gross growth rate was estimated to be 1-1.35 divisions per day and was quasi balanced with phytoplankton mortality for a 24 h period.
Journal Of Marine Systems (0924-7963) (Elsevier Science Bv), 2010-09 , Vol. 82 , N. 4 , P. 230-244

Droits : 2010 Elsevier B.V. All rights reserved.
http://archimer.ifremer.fr/doc/00013/12437/9258.pdf
DOI:10.1016/j.jmarsys.2010.05.010
http://archimer.ifremer.fr/doc/00013/12437/

Éditeur(s) : HAL CCSD Cambridge University Press (CUP)
Résumé : Patterns of leaf production and leaf fall directly influence leaf area index and forest productivity. Here, we focused on Cecropia sciadophylla individuals inhabiting the extremes of the gradient in seasonality in rainfall at which C. sciadophylla occurs. In Colombia and French Guiana we compared the intra-annual variation in leaf production as well as the intra-annual fluctuation in internode length on a total of 69 saplings ranging in size from 1 to 2 m. The mean rate of leaf production was similar to 2 leaves mo(-1) in both populations, and the rate of leaf production was constant throughout the year. Our results showed monthly variation in internode length and the number of live leaves per sapling in the seasonal habitat and variation only in internode length in the everwet habitat. Because the rate of leaf production is constant at both localities, the difference in number of live leaves per sapling at the seasonal site must reflect seasonal variation in leaf life span. We show that in Cecropia, internode length can serve as an indicator of precipitation seasonality. Finally an open question is whether leaf production in other pioneer species is also independent of climatic seasonal cues. This information could allow us to link growth and climate of secondary forest species and better understand how past and future climate can affect plant growth trajectories.
ISSN: 0266-4674

hal-01032402
https://hal.archives-ouvertes.fr/hal-01032402
DOI : 10.1017/S0266467413000394

Résumé : La forêt tropicale humide guyanaise est située dans le grand ensemble Amazonien, qui est un point chaud des enjeux sur la biodiversité et la conservation des forêts tropicales. Une connaissance de l’âge et des taux d’accroissement des arbres est primordiale pour comprendre la dynamique de ces écosystèmes Cependant, l’absence de conditions hivernales sous les tropiques rend difficile la lecture de l’histoire dans les bois de ces forêts. En se plaçant dans le champ de l’anatomie fonctionnelle, cette thèse à caractère exploratoire avait pour but, à travers différentes approches, i) de suivre l’activité cambiale de quatre espèces ligneuses durant deux ans par prélèvements de micro-carottes, ii) de faire une étude dendrochronologique sur une espèce guyanaise, iii) d’utiliser la variation de la signature isotopique comme marqueur de croissance (ou d’histoire) et iv) de tester la pollution aérienne consécutive aux lancements de la fusée Ariane comme marqueurs de la croissance. L’examen bi-mensuel de l’activité cambiale a montré que tous les arbres présentent des alternances de quasi repos et de forte activité du cambium durant les deux années. Ces périodes de ralentissement ont été plus marquées chez Parkia nitida (décidue), Parkia velutina (décidue) et Schefflera morototoni (sempervirente). On observe donc des périodes de ralentissement de l’activité du cambium aussi bien chez deux espèces décidues que chez une espèce sempervirente. Il n’y a pas de patron universel de liaisons deux à deux entre pluviométrie intra-annuelle, phénologie de la feuillaison et activité cambiale même si des analogies fortes existent au cas par cas entre deux espèces pour une relation donnée. L’étude dendrochronologique chez Parkia nitida a mis en évidence la présence de cernes de croissance bien distincts et annuels. La limite de cerne se caractérise par une fine bande de parenchyme marginal renfermant de nombreux cristaux d’oxalate de calcium. A l’échelle de l’arbre, la croissance secondaire est homogène et elle est relativement synchrone au sein d’individus de cette espèce dans le même lieu. Cependant, l’influence des paramètres climatiques testés, comme la température et les précipitations, sur la croissance radiale annuelle est faible sur la période considérée. Ces deux premières études montrent que, dans le contexte de la Guyane française, la saisonnalité annuelle très marquée de la pluviométrie ne se traduit pas par un signal suffisamment fort pour synchroniser l’ensemble du fonctionnement des arbres. Néanmoins, elle influence clairement, au cas par cas soit la feuillaison, soit la floraison, soit la croissance cambiale. Les autres méthodes de marquage de la croissance (i.e. isotopie et chimie) entreprises demandent à être approfondies. Les bois des espèces de forêt tropicale humide se caractérisant en moyenne par un pourcentage élevé du plan ligneux occupé par les parenchymes axiaux, il serait important d’entreprendre une étude approfondie de leur rôle en tant qu’accumulateurs de substances potentiellement utiles pour la défense du bois dans l’arbre contre les xylophages. L’évolution dans le temps (périodicité, vieillissement chimique) des solutions de défense mises en place dans le bois est une piste intéressante pour la dendrochronologie
The rainforest of French Guiana is located in the Amazonian region, which is a hotspot of biodiversity, thus leading to several issues about conservation in tropical forests. Knowledge of the age and growth rate of trees is essential to understand the dynamics of these ecosystems. However, due to the lack of winter conditions it is difficult to read the story in the wood of these tropical forests. In the topic of functional anatomy, this thesis intends through different approaches i) to monitor the cambial activity of four tree species during two years sampling micro-cores, ii) to make a dendrochronological study on a Guyanese species iii) to use the variation of the isotopic signature as a marker of growth (or history) and iv) to test air pollution following launches of the Ariane rocket as markers of growth. The bi-monthly review of cambial activity showed that all trees have almost alternating rest and high activity of cambium in both years. These downturns have been more pronounced in Parkia nitida (deciduous), Parkia velutina (deciduous) and Schefflera morototoni (evergreen). We observe periods of cambial activity downturn in two deciduous species as well as in an evergreen species. There is no universal pattern of connections in pairs between rainfall intra-annual phenology of leafing and cambial activity although strong similarities exist in each case between two species for a given association. The dendrochronological study in Parkia nitida highlights the presence of distinct annual growth rings. The limit is characterized by a thin band of marginal parenchyma containing numerous crystals of calcium oxalate. At tree scale, secondary growth is homogeneous and relatively synchronous within individuals of this species in the same location. However, the influence of tested climatic parameters, such as temperature and precipitation on the annual radial growth, is low over the considered period. The first two studies showed that, in the environment of French Guiana, marked annual seasonality of rainfall does not affect in a strong way the behavior of the trees. Nevertheless, those rainfalls have an influence either on leafing, flowering or cambial growth. Other methods of marking growth (i.e. isotopic and chemical) intended require further investigations. Axial parenchyma represents a high average percentage in the wood of rainforest species: it could be important to investigate more precisely its role as accumulators of potentially useful substances involved in wood defense against borers. The evolution throughout time (periodicity, chemical aging) of defense mechanisms in woods is an interesting way for dendrochronology.

http://www.theses.fr/2013AGUY0605/document

Éditeur(s) : Elsevier
Résumé : The individual food-demand behavior of juvenile European sea bass (Dicentrarchus labrax, L.) reared in groups under self-feeding conditions was investigated. The triggering activity on self-feeder, i.e. index of the food-demand activity, agonistic interactions and territorial behavior were monitored for periods of 42 to 68 days in six groups of 50 fish. The specific growth rate was calculated and the brain serotonergic activity was used as a stable index of social stress. Inter-individual differences appeared in triggering activity and three groups were distinguished: 3-5 high-triggering fish, 17-30 low-triggering fish and the remaining individuals were null-triggering fish. There were no significant differences in specific growth rates calculated at the end of the experiment (day 42 or day 68) between individuals with high, low, and null food-demand (ANOVA, p > 0.05). No territorial or agonistic behaviors were observed, however, there were significant differences in brain scrotonergic activity between the three triggering groups (ANOVA, p=0.050 in telencephalon and p=0.004 in cerebellum). Specifically, high-triggering fish had lower serotonergic turnover than low or null-triggering fish. We put forth the hypothesis that fish with low or null-triggering activity could be stressed by the high activity of high-triggering individuals. (c) 2006 Elsevier Inc. All rights reserved.
Physiology & Behavior (0031-9384) (Elsevier), 2007-03 , Vol. 90 , N. 4 , P. 559-566

Droits : 2006 Elsevier Inc. All rights reserved
http://archimer.ifremer.fr/doc/2007/publication-2637.pdf
DOI:10.1016/j.physbeh.2006.11.005
http://archimer.ifremer.fr/doc/00000/2637/

Éditeur(s) : HAL CCSD Wiley
Résumé : Decomposing litter provides critical nutrients for plants, particularly in nutrient-poor ecosystems such as tropical forests. We hypothesised that decomposing litter improves the performance of a variety of tropical tree seedlings, and that this litter effect varies depending on the species of litter present in litter mixtures. We addressed these hypotheses with a large pot experiment manipulating a range of different litter mixtures of contrasting quality and using seedlings of four tree species from the Amazonian forest of French Guiana. In contrast to our initial hypothesis, decomposing litter had either neutral or negative impacts on seedling growth, despite strongly different growth rates, biomass allocation patterns and leaf and root traits among tree species. Tree species varied in their responses to litter additions, which were further modified by species identity of the added litter. Our data show litter species-specific effects on growth, biomass allocation and leaf and root traits of tropical tree seedlings. These results suggest that a net nutrient release from decomposing litter does not necessarily improve tree seedling growth, even under nutrient-limiting conditions. In conclusion, litter layer composition may affect seedling establishment and recruitment success beyond litter-derived plant nutrient availability, which may contribute to tree species composition and dynamics in the studied tropical forest.
ISSN: 1435-8603

hal-01032421
https://hal.archives-ouvertes.fr/hal-01032421
DOI : 10.1111/j.1438-8677.2011.00534.x

Éditeur(s) : Gauthier-Villars
Résumé : Several models for the evolution of complex life histories have assumed a carrying capacity for both larval and postlarval stages. In addition, the densities of larvae in laboratory experiments are often so high that there is competition for food. Published values for maximal clearance rates and estimated abundances of larvae suggest that these assumptions and experimental conditions are unrealistic for most marine larvae. For most ciliated larvae, maximum clearance rates are at most a few mi of water daily, and their estimated larval concentrations are at most one to several larvae per liter. Therefore these larvae appear to be too scarce for their grazing to affect their food supply. Larvae of most species are also scarce relative to co-occurring planktonic animals that feed on particles in the same size range. Larvae of many species are scarce relative to co-occurring larvae with a similar feeding apparatus. These observations suggest that larvae of most species have a negligible effect on their food supply. Exceptions could occur when a single species of larva dominates the zooplankton; such circumstances appear to be rare, although extreme aggregations of larvae dominated by a single species could be missed by pump or net samples. Analogous but more conjectural arguments can be made for density-dependent attraction of predators to larval prey. These inferences apply to single species, not to meroplanktonic larvae as a whole: in some coastal waters, larvae of benthic invertebrates comprise a large portion of the multicellular planktonic animals. Also, a species' larval growth may be food-limited in many waters, even when the abundance of food is independent of the abundance of its larvae.
Oceanologica Acta (0399-1784) (Gauthier-Villars), 1996 , Vol. 19 , N. 3-4 , P. 399-407

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/00094/20495/18164.pdf
http://archimer.ifremer.fr/doc/00094/20495/

Éditeur(s) : HAL CCSD Montpellier : CIRAD
Résumé : This article presents the effects of logging on the dynamics of above-ground biomass from the results of the post-logging study within two forests: Cikel in Eastern Para, Brazil and Paracou in French Guiana. The main objective is to compare the impact of commercial logging on the regeneration of the above-ground biomass in these forests whose characteristics differ in terms of structure and growth. In both sites, the intensity of exploitation is a key factor in determining the loss of biomass and the time required for its regeneration. In Paracou, the regeneration of biomass lost during conventional logging of 10 trees per hectare takes 45 years and more than 100 years when operating with higher intensity (21 trees/ha). In Cikei the forest biomass regenerates after 49 years harvesting 6 trees/ha and that takes 87 years after removal of 8 trees/ha. This regeneration needs similar time on both sites but with lower logging intensity at Cikel, in which felled trees are larger with a greater biomass than those of Paracou. This post-logging study has established a direct correlation of the dynamics of the biomass with the initial structure of the forest, as well as with the parameters of forest dynamics: mortality, growth and recruitment. The accumulation of biomass by the tree growth of the two remaining stands is a key parameter for the net carbon storage, while the contribution of recruitment in Paracou becomes significant only after 10 years after felling. Therefore in view to improve the growth of residual trees, it is compulsory to apply adequate silvicultural treatments such as selective thinning or removal of vines. While the two forests are geographically close enough, their regenerative abilities differ and because of the significant difference in size of the trees, the forest could tolerate more intensive harvesting in French Guiana
ISSN: 0006-579X

hal-01032427
https://hal.archives-ouvertes.fr/hal-01032427

Éditeur(s) : HAL CCSD Geological society of London
Résumé : International audience
We present a synthesis of the tectonic and thermochronological evolution of the Eastern Tibet since the Triassic. The long-term cooling histories obtained on magmatic and metamorphic rocks of the South Songpan-Garze--, Kunlun and Yidun blocks are similar showing a very slow and regular cooling during Late Jurassic and Cretaceous, confirming the suspected lack of major tectonic events between c. 150 and 30 Ma. The exhumation linked to the Tertiary growth of the Tibetan Plateau initiated around 30 Ma and concentrates at the vicinity of the major tectonic structures. Exhumation rates increased again from about 7 Ma in the Longmen Shan. To interpret this very slow cooling rate between Late Jurassic and Early Cenozoic from granites of this area, we use a simple 1D thermal model that takes into account the thermal properties of both sediments and crust. The results suggest that: (1) high temperature (500 8C) can be kept over a long period of time; (2) during Cretaceous, cooling is mostly controlled by the thermal properties of sediments of continental origin; and (3) the initial Late Triassic rapid cooling rate was caused by the large thermal contrast between the granite body and the sedimentary rocks rather than by a high exhumation rate.
Growth and Collapse of the Tibetan Plateau

insu-00610491
https://hal-insu.archives-ouvertes.fr/insu-00610491
DOI : 10.1144/SP353.2

Éditeur(s) : HAL CCSD Instituto Oswaldo Cruz, Ministério da Saúde
Résumé : International audience
Leishmania are protozoan parasites that show remarkable diversity, as revealed by the various clinical forms of leishmaniasis, which can range from mild skin lesions to severe metastatic cutaneous/mucosal lesions. The exact nature and extent of Leishmania phenotypic diversity in establishing infection is not fully understood. In order to try to understand some aspects of this diversity, we subcutaneously infected BALB/c mice with first and second generation subclones of a L. amazonensis strain isolated from a patient (BA125) and examined in vivo lesion growth rate and antimony susceptibility. In vivo fast-, medium- and slow-growing subclones were obtained; moreover, fast-growing subclones could generate slow-growing subclones and inversely, revealing the continuous generation of diversity after passage into mice. No antimony-resistant subclone appeared, probably a rare occurrence. By tagging subclone cells with a L. amazonensis genomic cosmid library, we found that only a very small number of founding cells could produce lesions. Leishmania clones transfected with in vivo selected individual cosmids were also diverse in terms of lesion growth rate, revealing the cosmid-independent intrinsic characteristics of each clone. Our results suggest that only a few of the infecting parasites are able to grow and produce lesions; later, within the cell mixture of each lesion, there coexist several parasite populations with different potentialities to grow lesions during the next infection round. This may reflect a sort of programmed heterogeneity of individual parasites, favoring the survival of some individuals in various environmental conditions.
ISSN: 0074-0276

hal-01489007
https://hal-univ-perp.archives-ouvertes.fr/hal-01489007

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Decreasing growth rate (Feeley et al., 2007) and large die-back due to drought (Phillips et al., 2009) suggest that tropical forests are suffering recent climate changes. Forest vulnerability to external factors (e.g. air pollution, acid rain) is widely studied in northern countries, while only a few attempts have investigated crown integrity in the Tropics. The method needs to be generic enough to account for the large number of species and crown shapes encountered in tropical forests. In the present study, we developed and tested a novel field method that estimates crown fragmentation (main branch mortality (MB) and secondary branch mortality (SB)), liana infestation (LI) and crown position (CP) in the canopy. The relationship between crown fragmentation and annual growth rate (agr) was investigated through multiple regression. Six out of eight canopy tree species showed significant growth decline with increasing crown fragmentation. Higher probability of death was also found in trees with severe crown fragmentation. The capacity of such crown assessment to depict tree vitality in a forest stand is discussed along with potential applications in both forest science and management
ISSN: 0378-1127

halsde-00611465
https://hal.archives-ouvertes.fr/halsde-00611465
DOI : 10.1016/j.foreco.2010.10.025

Éditeur(s) : HAL CCSD American Geophysical Union (AGU)
Résumé : International audience
The Tian Shan Mountains constitute central Asia's longest and highest mountain range. Understanding their Cenozoic uplift history thus bears on mountain building processes in general, and on how deformation has occurred under the influence of the India-Asia collision in particular. In order to help decipher the uplift history of the Tian Shan, we collected 970 samples for magnetostratigraphic analysis along a 4571-m-thick section at the Jingou River (Xinjiang Province, China). Stepwise alternating field and thermal demagnetization isolate a linear magnetization component that is interpreted as primary. From this component, a magnetostratigraphic column composed of 67 polarity chrons are correlated with the reference geomagnetic polarity timescale between ~1 Ma and ~23.6 Ma, with some uncertainty below ~21 Ma. This correlation places precise temporal control on the Neogene stratigraphy of the southern Junggar Basin and provides evidence for two significant stepwise increases in sediment accumulation rate at ~16–15 Ma and ~11–10 Ma. Rock magnetic parameters also undergo important changes at ~16–15 Ma and ~11–10 Ma that correlate with changes in sedimentary depositional environments. Together with previous work, we conclude that growth history of the modern Tian Shan Mountains includes two pulses of uplift and erosion at ~16–15 Ma and ~11–10 Ma. Middle to upper Tertiary rocks around the Tian Shan record very young (<~5 Ma) counterclockwise paleomagnetic rotations, on the order of 15° to 20°, which are interpreted as because of strain partitioning with a component of sinistral shear that localized rotations in the piedmont.
ISSN: 0278-7407

insu-00376345
https://hal-insu.archives-ouvertes.fr/insu-00376345
https://hal-insu.archives-ouvertes.fr/insu-00376345/document
https://hal-insu.archives-ouvertes.fr/insu-00376345/file/2007TC002137.pdf
DOI : 10.1029/2007TC002137

Éditeur(s) : HAL CCSD Trans Tech Publications Inc.
Résumé : Two, high purity, Al-0.1 and 0.3wt%Mn alloys have been cold deformed in plane strain compression to strains of order 1.8 and the kinetics of subsequent recovery by sub-grain coarsening during annealing at 150-300°C measured by high resolution FEG-SEM EBSD. Accurate sub-grain size and misorientation distributions and their evolution with time and temperature have been determined. The average growth rates are then used to estimate the sub-grain boundary mobilities. Growth is analyzed by two well-known growth laws for the average sub-grain size δ (t): i) the standard relation for grain growth: where the exponent n takes values of 2-8 and ii) the relation proposed by Nes for dislocation climb in sub-grain walls: It is shown that the latter relation gives a better fit with the data in terms of the time and temperature dependence of the sub-grain sizes. In particular the activation energies for the logarithmic law are much closer to the values expected for solute-controlled movement of sub-boundaries.
Materials Science Forum

hal-00795441
https://hal.archives-ouvertes.fr/hal-00795441
DOI : 10.4028/www.scientific.net/MSF.715-716.725

Éditeur(s) : EDP Sciences
Résumé : During 84 days, the effects of density on juvenile sea bass (Dicentrarchus labrax) (76 +/- 16 g) were studied in an experimental tank-based flow through system. Performance, stress response and resistance to virus infection were analysed under five stabilized rearing densities: 10, 20, 40, 70 and 100 kg m(-3). Water quality parameters (CO2, total ammonia nitrogen and O-2) were measured and maintained close to the recommended values for farmed sea bass by adjusting water renewal exchange. No significant differences were observed between density treatments, neither on stress response (cortisol) nor susceptibility to nodavirus. With regards to biological performances, the daily feed intake and specific growth rate were significantly lower in fish reared at the 100 kg m(-3) density. Results on the effects of density in sea bass reared in flow through (present study) and in recirculating aquaculture systems (RAS) (Sammouth et al. 2009) were compared as a contribution to the identification of density not affecting health and welfare in farmed sea bass.
Aquatic Living Resources (0990-7440) (EDP Sciences), 2010-01 , Vol. 23 , N. 1 , P. 109-117

Droits : 2010 EDP Sciences, IFREMER, IRD
http://archimer.ifremer.fr/doc/00002/11287/7824.pdf
DOI:10.1051/alr/2009056
http://archimer.ifremer.fr/doc/00002/11287/

Éditeur(s) : Cushman Foundation for Foraminiferal Research
Résumé : The objectives of this study were to observe foraminiferal colonization patterns and behavior in shrimp ponds in New Caledonia during a shrimp-growing (farming) cycle. Weekly collecting at 10 stations in 8 shrimp ponds yielded a total of 170 samples accompanied by environmental data. Seawater pumped from the nearby ocean filled the ponds at the beginning of the growth cycle and its daily renewal maintained salinity at 32-39, and supplied the ponds with influxes of smaller, mostly juvenile, foraminifera. A few days after initial filling, the pioneering species Ammonia tepida and Quinqueloculina seminula appeared, with A. tepida dominant. Their high reproduction rates increased both living and dead assemblage densities during the first 10 weeks. Populations of these two species then stabilized with higher oxygen demand (drop of redox) and consumption of living foraminifera by shrimp. Only a few colonizers subsequently appeared, which was attributed to the isolation of the pond, despite the high rate of water renewal. Only one pond had notably higher species richness, but it could not be distinguished from the others by its physicochemical parameters. The species that appeared in ponds initially barren of foraminifera also survived where there was water seepage between growing cycles, suggesting that the assemblages had already reached equilibrium with the environment. Despite the number of environmental parameters measured, only oxygen and reactive organic matter correlated with the microfauna on a weekly timescale. We assume that other parameters do not significantly affect foraminifera until they reach critical threshold. Consistent with previous studies, A. tepida was the species most tolerant of organic influx, but its relative abundance dropped once the organic matter flocculated and settled, leading to disoxic conditions in the sediment. Conversely, Q. seminula was able to climb through the floc and reach the oxygenated layer, where its relative abundance increased.
Journal of Foraminiferal Research (0096-1191) (Cushman Foundation for Foraminiferal Research), 2009-10 , Vol. 39 , N. 4 , P. 249-266

Droits : 2009 Cushman Foundation for Foraminiferal Research
http://archimer.ifremer.fr/doc/2009/publication-6954.pdf
DOI:10.2113/gsjfr.39.4.249
http://archimer.ifremer.fr/doc/00000/6954/

Éditeur(s) : HAL CCSD Wiley
Résumé : Plant germination and development depend upon a seed's successful dispersal into a suitable habitat and its ability to grow and survive within the surrounding biotic and abiotic environment. The seeds of Aechmea mertensii, a tank-bromeliad species, are dispersed by either Camponotus femoratus or Neoponera goeldii, two ant species that initiate ant gardens (AGs). These two mutualistic ant species influence the vegetative and reproductive traits of the bromeliad through their divergent ecological preferences (i.e. light and substrate). We hypothesised that the seeds dispersed by these two ant species have underlying genetic differences affecting germination, growth and survival of A.mertensii seedlings in different ways. To test this, we used an experimental approach consisting of sowing seeds of A.mertensii: (i) taken from the two AG-ant associations (i.e. seed origin), (ii) in two contrasting light conditions, and (iii) on three different substrates. Light and substrate had significant effects on germination, survival and on eight key leaf traits reflecting plant performance. Seed origin had a significant effect only on germination and on two leaf traits (total dry mass and relative growth rate). Overall, this bromeliad performs better (i.e. high growth and survival rates) when growing both in the shade and in the carton nest developed by C.femoratus ants. These results suggest that the plasticity of the tank bromeliad A.mertensii is mainly due to environment but also to genetic differences related to seed origin, as some traits are heritable. Thus, these two ant species may play contrasting roles in shaping plant evolution and speciation.
ISSN: 1435-8603

hal-01606565
https://hal.archives-ouvertes.fr/hal-01606565
DOI : 10.1111/plb.12452
PRODINRA : 407514