Éditeur(s) : HAL CCSD Springer Verlag
Résumé : International audience
The upward oil migration in a transparent and rough fracture containing a liquid of higher density is studied experimentally using a light transmission technique. The aperture heterogeneity is also measured by light transmission. The injection of oil in a fracture containing a heavier fluid produces a gravitational fingering instability. Depending on the injection velocity (capillary number, Ca) and the density difference between the two fluids (Bond number, Bo), different patterns are observed during the oil displacements. The width of the finger and its velocity are measured as a function of Bo and Ca. A stability analysis of the interface, based on a generalised Darcy equation in a two-dimensional fracture, allows an accurate description of the experimental results. The order of magnitude of the finger width and its velocity are in good agreement with the calculations, with small disparities due to various unknown fluid flow parameters: capillary pressure, finger thickness in the gap of the fracture, finger tortuosity and oil velocity field into the finger. The theoretical approach allows constructing a (Ca, Bo) phase diagram of stability of the interface.
ISSN: 0169-3913

hal-00429329
https://hal.archives-ouvertes.fr/hal-00429329
DOI : 10.1007/s11242-009-9340-2

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : International audience
We recall the construction of the Reed-Muller hermitian codes and some results about hermitians forms and exponential sums. With the help of these results, we give the weight distribution of the Reed-Muller hermitian codes and give some examples for which experimental computations have been made.
ISSN: 0938-1279

hal-00771918
https://hal.univ-antilles.fr/hal-00771918

Éditeur(s) : Springer
Résumé : Clonality and genetic structure of the coral Pocillopora damicornis sensu lato were assessed using five microsatellites in 12 populations from four islands of the Society Archipelago (French Polynesia) sampled in June 2008. The 427 analysed specimens fell into 132 multilocus genotypes (MLGs), suggesting that asexual reproduction plays an important role in the maintenance of these populations. A haploweb analysis of ITS2 sequences of each MLG was consistent with all of them being conspecific. Genetic differentiation was detected both between and within islands, but when a single sample per MLG was included in the analyses, the populations turned out to be nearly panmictic. These observations provide further evidence of the marked variability in reproductive strategies and genetic structure of P. damicornis throughout its geographic range; comparison with results previously obtained for the congeneric species Pocillopora meandrina underlines the importance of life history traits in shaping the genetic structure of coral populations
Marine Biology (0025-3162) (Springer), 2014-03 , Vol. 161 , N. 3 , P. 531-541

Droits : Springer-Verlag Berlin Heidelberg 2013
http://archimer.ifremer.fr/doc/00171/28209/26518.pdf
DOI:10.1007/s00227-013-2355-9
http://archimer.ifremer.fr/doc/00171/28209/

Éditeur(s) : HAL CCSD Springer Verlag/EDP Sciences
Résumé :  
absent
ISSN: 1286-4560

hal-01032143
https://hal.archives-ouvertes.fr/hal-01032143
DOI : 10.1051/forest:2008061

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : International audience
In this work, we have studied quenching of the fluorescence of two well-known oxygen probes, 1-pyrene butyric acid (PBA) and tris(2,2'-bipyridine)ruthenium ([Ru(bpy)(3)](2+)) by reactive oxygen species (superoxide anion, nitric oxide derivative, hydrogen peroxide) and by the O(2) molecule. Both, time-resolved and steady state fluorescence measurements were performed in solution (ethanol, dimethyl sufoxide, water) and in micelles of Sodium Dodecyl Sulfate that serve as a model for membrane-containing biological structures. We have found that only the free radicals and O(2) can actively quench for the two probes, but not the diamagnetic H(2)O(2). Our data correspond to the classical Stern-Volmer equation. H(2)O(2) has an effect only at high molar concentrations (>0.1 M). In contrast, effective concentrations of free radicals and O(2) that lead to quenching are in millimolar range. In conclusion, our methods allows for detecting global ROS that are small free radicals without interference from the reactive hydroxyl radical. Our data suggest that the method can be used for the quantification of ROS in individual living cells based on the measurement of fluorescence lifetime of those probes
ISSN: 1053-0509

hal-01326234
https://hal.archives-ouvertes.fr/hal-01326234
DOI : 10.1007/s10895-008-0425-z

Éditeur(s) : HAL CCSD Springer Verlag/EDP Sciences
Résumé : International audience
We present a plant trait database covering autecology for rain forest trees of French Guiana. The database comprises more than thirty traits including autecology (e.g., habitat associations and reproductive phenology), wood structure (e.g., density and tension characteristics) and physiology at the whole plant (e.g., carbon and nitrogen isotopes) and leaf level (e.g., specific leaf area, photosynthetic capacity). The current database describes traits for about nine hundred species from three hundred genera in one hundred families. For more than sixty species, data on twelve morphological and ecophysiological traits are provided for individual plants under different environmental conditions and at different ontogenetic stages. The database is thus unique in permitting intraspecific analyses, such as the effects of ontogenetic stages or environmental conditions on trait values and their relationships.
ISSN: 1286-4560

Droits : info:eu-repo/semantics/OpenAccess
hal-00884130
https://hal.archives-ouvertes.fr/hal-00884130
https://hal.archives-ouvertes.fr/hal-00884130/document
https://hal.archives-ouvertes.fr/hal-00884130/file/hal-00884130.pdf

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : International audience
Meconium is the earliest stool of newborns, and is a complex matrix that reflects the degree of exposure of the fetus to xenobiotics. To investigate fetal exposure to volatile organic compounds, an analytical method was developed to identify and quantify BTEX (benzene, toluene, ethylbenzene, and o,m,p-xylene) and two chlorinated solvents (trichloroethylene and tetrachloroethylene) in meconium. Headspace-solid-phase microextraction coupled with gas chromatography-mass spectrometry was selected because it is simple, sensitive, can be automated, and requires no extensive sample preparation. Several extraction variables were optimized (fiber type, incubation time, temperature of fiber, and use of salt). Because meconium is a complex matrix, quantification by SPME was considered carefully because of potential interference, for example competitive adsorption. Calibration in water was compared with calibration in meconium using external and internal methods (with isotope-labeled compounds). In meconium, limits of quantification were determined to be in the range 0.064-0.096 ng g(-1) for the investigated compounds. All target compounds were determined in "real-case" meconium samples.
ISSN: 1618-2642

hal-01064967
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01064967
DOI : 10.1007/s00216-014-7836-2
PUBMED : 24838489

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : no abstract
ISSN: 0256-2928

hal-01360229
https://hal.archives-ouvertes.fr/hal-01360229

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : International audience
We investigate the existence of several kinds of prederivatives for set-valued mappings enjoying convex properties. Then, we established both necessary and sufficient optimality conditions, involving such prederivatives, for set optimization problems.
ISSN: 0925-5001

hal-01172386
https://hal.archives-ouvertes.fr/hal-01172386
DOI : 10.1007/s10898-015-0338-8

Éditeur(s) : HAL CCSD Springer Verlag (Germany) Springer Verlag
Résumé : Dehydration reactions result in minerals’ replacement and a transient fluid-filled porosity. These reactions involve interface-coupled dissolution–precipitation and might therefore lead to fixed crystallographic orientation relations between reactant (protolith) and product phases (i.e. topotaxy). We investigate these two phenomena in the dehydration of a foliated antigorite (atg) serpentinite by comparing the crystallographic preferred orientation (CPO) developed by olivine (ol), orthopyroxene (opx) and chlorite (chl) during high-pressure antigorite and chlorite dehydration in piston-cylinder experiments and in natural samples recording the dehydration of antigorite (Cerro del Almirez, Betic Cordillera, Spain). Experiments were performed under undrained conditions resulting in fluid-filled porosity and in strong CPO of the prograde minerals, controlled by the pre-existing antigorite CPO in the reactant foliated serpentinite. The orientation of a ol,opx and c∗chl is parallel to c∗atg from the protolith. The Cerro del Almirez samples show similar, locally well-developed topotactic relations between orthopyroxene, chlorite and antigorite, but the product CPOs are weaker and more complex at the thin section scale. In contrast to the experiments, olivine from natural samples shows a weak correlation between b ol and the former c∗atg. We relate the strengthening of local topotactic relations and the weakening of the inherited CPO at a larger scale in natural samples to compaction and associated fluid migration. Microstructural features that might be related to compaction in the natural samples include: (1) smooth bending of the former foliation, (2) gradual crystallographic misorientation (up to 16°) of prismatic orthopyroxene due to buckling by dislocation creep, (3) inversion of enstatite to low clinoenstatite (P21/c) along lamellae and (4) brittle fracturing of prismatic orthopyroxene enclosed by plastically deformed chlorite. The coexistence of orthopyroxene buckling and clinoenstatite lamellae enables estimating the local strain rates and shear stresses generated during compaction. An lower bound for the strain rates in the order of 10−12 to 10−13 s−1 and shear stresses of 60–70 MPa are estimated based on creep data. Lower shear stresses (20–40 MPa) are retrieved using a theoretical approach. These data point to slow compaction (and fluid extraction) in nature if the system is not perturbed by external forces, with rates only marginally higher than the viscoplastic deformation of the solid matrix.
ISSN: 0010-7999

hal-01174158
https://hal.archives-ouvertes.fr/hal-01174158
DOI : 10.1007/s00410-015-1129-4

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : International audience
Propagation energies for five examples of deformation bands in porous sandstones from four field sites in Nevada, Utah, and France were calculated by using the J-integral approach. Pure compaction bands that accommodate primarily closing displacements from the Valley of Fire (Nevada) site have a closing-mode band propagation energy of J I = 5.5 ± 1.6 kJ/m2. Shear-enhanced compaction bands having subequal amounts of normal (closing) and shear strains across them from the same site have propagation energies of J I = 6.11 ± 1.8 kJ/m2 and J II = 1.52 ± 0.5 kJ/m2 for closing and shearing modes respectively. Closing- and shearing-mode band propagation energies for shear-enhanced compaction bands from the Buckskin Gulch (Utah) site, 5.63 ± 1.7 and 1.91 ± 0.57 kJ/m2 and the Uchaux (France) site, 11.0 ± 3.3 and 2.35 ± 0.7 kJ/m2 respectively are comparable to the values for similar structures from the Valley of Fire site. Cataclastic deformation bands at the Orange (France) site accommodate significantly larger values of shear offset than do shear-enhanced compaction bands, with a ratio of shear to closing offset that exceeds 7. The calculated closing- and shearing-mode propagation energies for these shear bands, 17.8 ± 5.4 and 3.3 ± 1.0 kJ/m2 respectively are comparable to those for pure or shear-enhanced compaction bands deformed at approximately the same depth of burial. Strain softening of cataclastic compactional shear bands implies unstable shearing, whereas stable and perhaps strain-hardening shearing may be inferred for shear-enhanced compaction bands. Displacement-length scaling relations for shear-enhanced compaction bands of the form D∝L are consistent with the results and with suggestions of band thickening during growth obtained from bifurcation analyses and with field observations of shear zones in porous host rock.
ISSN: 0376-9429

hal-00750341
https://hal.archives-ouvertes.fr/hal-00750341
DOI : 10.1007/s10704-012-9730-2

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : International audience
Despite the impact of soil millipedes on litter fragmentation in tropical forests, there have been few studies dealing with factors determining their habitat preference in these ecosystems. In a natural secondary dry forest of Guadeloupe on Leptosol, two complementary studies were carried out in order to test the hypothesis that litter N-content strongly influences millipede distribution. Millipede abundance and species richness were described in the field under two tree species, Bursera simaruba and Pisonia subcordata, and were related to the chemical characteristics of their foliage. In addition, a laboratory experiment was done in order to assess millipede feeding preferences regarding the chemical characteristics of leaves from various species. Millipede abundance and species richness were significantly higher under P. subcordata than under B. simaruba, probably due to the higher N content of P. subcordata leaves. Moreover, millipedes fed preferentially on N-rich leaves. The present study confirms that there was a close correlation between the preferred food, its chemical composition and the local distribution of millipede populations.
ISSN: 0178-2762

hal-00495211
https://hal.archives-ouvertes.fr/hal-00495211
https://hal.archives-ouvertes.fr/hal-00495211/document
https://hal.archives-ouvertes.fr/hal-00495211/file/BFSO-D-08-00133-1.pdf
DOI : 10.1007/s00374-008-0321-3

Éditeur(s) : HAL CCSD Springer Verlag/EDP Sciences
Résumé : International audience
Context: Woodcutting is a very old technology but scientific research is scarce on the subject. In the last 50 years much work on basic mechanisms as well as industrial processes has been done in France. Aims: The specific nature of wood introduces strong differences between wood and metal cutting processes. The paper focuses on French teams' contributions. Results: The basic aspects of the tool–material interaction for different basic modes in woodcutting are highlighted. In primary conversion such as sawing, veneer cutting or green wood chipping, huge progress comes from automation and the possibility of linking the process to log and product quality through new sensors. In secondary processing much has been done on the links between the cutting process, surface qualification and the properties of these surfaces for further processing, such as gluing or coating. Tool wear depends on the cutting process, timber quality, and species. Trade-offs are required in tool technology and coating technologies may improve tool life. Conclusion: A large amount of knowledge and innovation has come from 50 years of worldwide research effort, with France being particularly active in this period. The transfer of skills from metals cutting industry was often a key, but much is needed to move closer to both metal cutting sector and woodcutting skills among craftsmen.
ISSN: 1286-4560

hal-01135156
https://hal.archives-ouvertes.fr/hal-01135156
https://hal.archives-ouvertes.fr/hal-01135156/document
https://hal.archives-ouvertes.fr/hal-01135156/file/Wood_machining_focus_French_research_Thibaut_al_2015.pdf
DOI : 10.1007/s13595-015-0460-2

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : International audience
Interleukin-33 (IL-33), a cytokine belonging to the IL-1 family, is crucially involved in inflammatory pathologies including liver injury and linked to various modes of cell death. However, a link between IL-33 and necroptosis or programmed necrosis in liver pathology remains elusive. We aimed to investigate the regulation of IL-33 during necroptosis-associated liver injury. The possible regulation of IL-33 during liver injury by receptor-interacting protein kinase 1 (RIPK1) and poly(ADP-ribose) polymerase 1 (PARP-1) was investigated in mice in vivo and in hepatic stellate cells in vitro. The liver immunohistopathology, flow cytometry, serum transaminase measurement, ELISA, and qPCR-based cytokine measurement were carried out. By using a chemical approach, we showed that pretreatment of mice with Necrostatin-1 (Nec-1) (inhibitor of RIPK1) and/or PJ34 (inhibitor of PARP-1) significantly protected mice against concanavalin A (ConA) liver injury (aspartate amino-transferase (AST)/alanine amino-transferase (ALT)) associated with down-regulated hepatocyte-specific IL-33 expression. In contrast, the expression level of most systemic cytokines (except for IL-6) or activation of liver immune cells was not altered by chemical inhibitors rather an increased infiltration of neutrophils in the liver. During polyinosine-polycytidylic acid (Poly(I:C))-induced acute hepatitis, liver injury and hepatocyte-specific IL-33 expression was also inhibited by PJ34 without any protective effect of PJ34 in CCl4-induced liver injury. Moreover, PJ34 down-regulated the protein expression of IL-33 in activated hepatic stellate cells by cocktail of cytokines or staurosporine in vitro. In conclusion, we evidenced that the Nec-1/PJ34 is a potent inhibitor of liver injury and Nec-1/PJ34 down-regulated hepatocyte-specific IL-33 expression in the liver in vivo or in hepatic stellate cells in vitro, suggesting IL-33 as a possible readout of necroptosis-involved liver pathologies. Necroptosis inhibitors can protect mice against liver injury induced by ConA or Poly(I:C). IL-33 expression in liver injury in vivo is inhibited by PJ34. IL-33 expression in hepatic stellate cells in vitro is inhibited by PJ34. Hepatocyte-specific IL-33 expression is down-regulated by Nec-1/PJ34 during hepatitis. IL-33 is a new marker of necroptosis-associated liver injuries.
ISSN: 0946-2716

hal-01134319
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01134319
DOI : 10.1007/s00109-015-1270-6
PUBMED : 25747661

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : International audience
The prognosis of vertebral alveolar echinococcosis (AE) is poor. We report on the unique outcome of a patient with preexisting liver cirrhosis, in whom a diagnosis of vertebral AE was established on vertebral histopathology (D4 corporectomy in 2010 for paraplegia). Therapeutic drug monitoring of albendazole (ABZ) showed that a low dosage was appropriate. The patient recovered and ABZ withdrawal was decided in 2014, with no relapse 18 months later. In this patient, infection was purely or mainly localized in the dorsal spine, and this may have been favored by liver cirrhosis. A longer follow-up is, however, needed to confirm cure.
ISSN: 0300-8126

hal-01509561
https://hal.archives-ouvertes.fr/hal-01509561
PUBMED : 28004258

Éditeur(s) : HAL CCSD springer
Résumé : International audience
Lecture notes in computer science

hal-00530822
https://hal.archives-ouvertes.fr/hal-00530822

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : no abstract
ISSN: 0090-6905

hal-01360230
https://hal.archives-ouvertes.fr/hal-01360230

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : Publication Inra prise en compte dans l'analyse bibliométrique des publications scientifiques mondiales sur les Fruits, les Légumes et la Pomme de terre. Période 2000-2012. http://prodinra.inra.fr/record/256699
Spontaneous gene flow between wild and cultivated chicory, Cichorium intybus L., may have implications for the genetic structure and evolution of populations and varieties. One aspect of this crop-wild gene flow is the dispersal of transgenes from genetically modified varieties, e.g. gene flow from GM chicory to natural chicory could have unwanted consequences. With the purpose to identify and quantify crop-wild gene flow in chicory, we analysed introgression in 19 wild chicory populations and 16 accessions of chicory varieties and landraces distributed across Northern, Central and Mediterranean Europe. The analysis used 281 AFLP markers and 75 SSAP markers giving a total of 356 polymorphic markers. Results from model based assignments with the program STRUCTURE indicated many incidents of recent gene flow. Gene flow was observed both between cultivars and wild populations, between landraces and wild populations, between different wild populations as well as between cultivars. Population structure visualized by distance-based clustering showed a North-South geographical structuring of the wild populations, and a general grouping of the cultivars corresponding to known origin. The results indicated, however, that the structuring between the two groups of wild and cultivated types was weak. As crop and wild recipients are genetically close and genes are transferred between the two types rather frequently, focus on mitigating crop-wild gene flow should be increased, before transgenic varieties are cultivated openly.
ISSN: 0925-9864

hal-01032184
https://hal.archives-ouvertes.fr/hal-01032184
DOI : 10.1007/s10722-008-9375-1

Éditeur(s) : HAL CCSD Springer Verlag (Germany)
Résumé : International audience
Mount Pinatubo volcano erupted in June 1991 in the main island of Luzon belonging to the Philippines archipelago. Huge economic losses and population exodus have followed. This major crisis has been relayed with other crises due to rainfed lahars which have been supplied with eruption deposits. These lahars have occurred every year since 1991 during the rainy season. They will probably last until 2005. After a brief presentation of the Philippine official response system to disasters, this paper draws up a critical analysis of the different kinds of institutional and social responses deployed to manage the different crisis and post-crisis phases of this event. Based on three viewpoints: from population, media and other actors, this analysis attempts to point out the strengths and weaknesses of the official management system, especially by studying the efficiency and the range of the solutions taken. So, it appears that the management of the June 1991 main crisis (eruption) was a success. On the other hand, difficulties have occurred with lahars risk management. Indeed, these lahars have obliged the authorities to protect and relocate thousands of people. In spite of persistent problems, the management system (monitoring/warning/evacuation) of lahar crises improves year after year. Failures appear especially within the rehabilitation program (protection/rehousing). Many direct (lack of means, preparedness, coordination, dialog,
etc.) and indirect (politico-administrative, socio-economic, cultural contexts) factors come together to lock the wheels of
the institutional response system. They defer the socio-economic start of this vital northern Philippines area.
GeoJournal

halshs-00119436
https://halshs.archives-ouvertes.fr/halshs-00119436
https://halshs.archives-ouvertes.fr/halshs-00119436/document

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : The area of forest plantations is increasing worldwide helping to meet timber demand and protect natural forests. However, with global change, monospecific plantations are increasingly vulnerable to abiotic and biotic disturbances. As an adaption measure we need to move to plantations that are more diverse in genotypes, species, and structure, with a design underpinned by science. TreeDivNet, a global network of tree diversity experiments, responds to this need by assessing the advantages and disadvantages of mixed species plantations. The network currently consists of 18 experiments, distributed over 36 sites and five ecoregions. With plantations 1-15 years old, TreeDivNet can already provide relevant data for forest policy and management. In this paper, we highlight some early results on the carbon sequestration and pest resistance potential of more diverse plantations. Finally, suggestions are made for new, innovative experiments in understudied regions to complement the existing network.
ISSN: 0044-7447

hal-01204232
https://hal.archives-ouvertes.fr/hal-01204232
DOI : 10.1007/s13280-015-0685-1
PRODINRA : 324368
PUBMED : 26264716