Éditeur(s) : HAL CCSD Ecological Society of America
Résumé : We investigated performance trade-offs among seedlings of nine tropical tree species during a five-year field experiment. Seedlings were grown in eight microhabitat types composed of paired gap and shaded understory sites in each of four soil types. We defined performance trade-offs relevant to coexistence as significant pairwise rank reversals for species performance between contrasting situations, of which we characterize three types: microhabitat, fitness component, and ontogenetic. Only 2 of 36 species pairs exhibited microhabitat trade-offs or reversed rankings for survival or relative growth rate (RGR) among microhabitats, and only one species pair reversed performance ranks among soil types. We found stronger evidence for rank reversals between fitness components (survival and RGR), particularly in gap vs. understory environments, suggesting a general trade-off between shade tolerance (survival in shade) and gap establishment (RGR in gaps). Third, the most frequent rank reversals between species pairs occurred between early and later ontogenetic stages, especially between fitness components in contrasting microhabitats. Overall, 15 of 36 pairs of potentially competing species exhibited some type of seedling performance trade-off, two species pairs never outperformed one another, and for 19 species pairs one species was a consistent better performer. We suggest that ontogenetic trade-offs, in concert with microhabitat and fitness component trade-offs, may contribute to species coexistence of long-lived organisms such as tropical trees.
ISSN: 0012-9658

hal-01031914
https://hal.archives-ouvertes.fr/hal-01031914

Éditeur(s) : HAL CCSD Ecological Society of America
Résumé : Tropical plant diversity is extraordinarily high at both local and regional scales. Many studies have demonstrated that natural enemies maintain local diversity via negative density dependence, but we know little about how natural enemies influence beta-diversity across habitats and/or regions. One way herbivores could influence plant beta-diversity is by driving allocation trade-offs that promote habitat specialization across resource gradients. We therefore predicted that increasing resource availability should be accompanied by increasing herbivory rates and decreasing plant allocation to defense. Second, relative abundances within plant lineages are predicted to reflect patterns of habitat specialization and allocation trade-offs. A phylogenetic context is vital not only to compare homologous plant traits (including defense strategies) across habitat types, but also to connect evolutionary trade-offs to patterns of species diversification in each phylogenetic lineage. We tested these predictions for trees in white-sand, clay terra firme, and seasonally flooded forests in Peru and French Guiana that represent the range of soil fertility, forest structure, and floristic compositions found throughout the Amazon region. We established 74 0.5-ha plots in these habitats and sampled all trees. Within 12 representative plots we marked newly expanding leaves of 394 saplings representing 68 species, including the most abundant species in each plot in addition to species from five focal lineages: Swartzia and Inga (Fabaceae), Protieae (Burseracaeae), Bombacoideae (Malvaceae), and Micropholis (Sapotaceae). We measured total leaf production rates for each sapling and calculated relative herbivory impact as the ratio between herbivory rate and leaf production rate. Herbivory rates averaged 2.1% per month, did not correlate with leaf production rate, and were similar across habitats. Relative herbivore impacts exceeded leaf production rates for most species. Leaf production rate averaged 2.8%, was significantly higher in seasonally flooded forests than the other two habitats, and exhibited significant correlations with specific leaf area. Species with high herbivory rates exhibited significantly lower relative abundances in terra firme forests. Overall, focal species within lineages present contrasting patterns regarding their herbivory rates and leaf production rate within habitats. These results highlight why a lineage-based approach is necessary when attempting to connect hypotheses regarding evolutionary trade-offs to community assembly patterns.
ISSN: 0012-9658

hal-01032418
https://hal.archives-ouvertes.fr/hal-01032418

Éditeur(s) : HAL CCSD Springer International Publishing
Résumé : The intensive farming practices that have been developed over the past 60 years are based mainly on the use of chemical inputs such as fertilisers and pesticides, mechanical tillage and monoculture. The limitations of these methods are now clear: long-term degradation of soil fertility, impacts on the environment and human health, high consumption of fossil fuels, low efficiency of inputs and threats to food security in a context of climate change. Would farming practices that rely on the activation of ecological processes be an alternative to achieve a balance between high productivity and environmental preservation? While many studies suggest a positive relationship between soil biodiversity and ecosystem services, there is considerable debate on the form such agricultural systems should take. This study reviewed the state of current knowledge and identified aspects requiring further research to achieve the aim of sustainable intensification of agriculture. The following major points emerged: 1) Most studies focused on the evaluation of individual practices. However, changes in farmers’ cropping practices to take advantage of soil biodiversity services would need to manage not only the interactions between various practices but also the trade-off between the technical and socio economic constraints of cropping systems. Advances in agricultural system design approaches may help to ensure appropriate trade-offs. 2) More attention should be given to drawing on knowledge from different sources: laboratory studies focusing on the ecological functions of soil biodiversity, experimental surveys on farmers’ fields to rank the farming practices and processes to be included in site-specific models, and on- station experiments to test hypotheses and acquire additional reference material. 3) Whereas advances in technical and scientific knowledge provide an increasing number of relevant indicators for characterizing biodiversity and ecological functions, studies are rarely targeted at the development of indicators that are accessible to farmers or their technical advisors. The lack of indicators accessible to grassroots players for evaluating the impacts of their decisions on soil biodiversity remains a serious obstacle to the development of innovative agro-ecological systems.
Sustainable Agriculture Reviews 14

ISBN : 978-3-319-06015-6
hal-01268743
https://hal.archives-ouvertes.fr/hal-01268743
DOI : 10.1007/978-3-319-06016-3_5
PRODINRA : 270786

Éditeur(s) : HAL CCSD Wiley
Résumé : 1. Trade-offs among functional traits reveal major plant strategies that can give insight into species distributions and ecosystem processes. However, current identification of plant strategies lacks the integration of root structural traits together with leaf and stem traits. 2. We examined correlations among 14 traits representing leaf, stem and woody root tissues. Traits were measured on 1084 individuals representing 758 Neotropical tree species, across 13 sites representative of the environmental variation encompassed by three widespread habitats (seasonally flooded, clay terra firme and white-sand forests) at opposite ends of Amazonia (French Guiana and Peru). 3. Woody root traits were closely aligned with stem traits, but not with leaf traits. Altogether leaf, stem and woody root traits delineated two orthogonal axes of functional trade-offs: a first axis defined by leaf traits, corresponding to a leaf economics spectrum, and a second axis defined by covarying stem and woody root traits, corresponding to a wood economics spectrum. These axes remained consistent when accounting for species evolutionary history with phylogenetically independent contrasts. 4. Despite the strong species turnover across sites, the covariation among root and stem structural traits as well as their orthogonality to leaf traits were strongly consistent across habitats and regions. 5. We conclude that root structural traits mirrored stem traits rather than leaf traits in Neotropical trees. Leaf and wood traits define an integrated whole-plant strategy in lowland South American forests that may contribute to a more complete understanding of plant responses to global changes in both correlative and modelling approaches. We suggest further meta-analyses in expanded environmental and geographic zones to determine the generality of this pattern.
ISSN: 0269-8463

hal-01032415
https://hal.archives-ouvertes.fr/hal-01032415
DOI : 10.1111/j.1365-2435.2012.02020.x

Éditeur(s) : HAL CCSD Seismological Society of America
Résumé : International audience
We present an improvement of the maximum intersection (MAXI) method in which absolute earthquake location is defined by the maximum intersection number of hyperbolic equal differential time (EDT) volumes (one EDT volume being described as all grid nodes satisfying the arrival‐time differences between two stations, ± a tolerance value known as TERR). This 3D technique is well adapted to a strongly heterogeneous environment, avoids the depth versus origin‐time trade‐off (even using P arrivals alone), and objectively filters possible erroneous arrival times. Improvements consist of introducing an iterative multiscale approach on the TERR parameter and conducting a hierarchy of grid discretization to refine the preliminary solution (multigrid algorithm). The outlier cleaning process is strengthened by conducting statistical analyses based on the number of EDT volume intersections per station, rather than on travel‐time residues. Processing two series of synthetic arrival times computed in the 3D seismological configuration of the southernmost Ryukyu subduction zone, offshore Taiwan, allows us to (1) confirm MAXI robustness, even when arrival times are highly disturbed or azimuthal coverage largely reduced, and (2) show that MAXI, by limiting trade‐offs between origin time and depth and between epicentral position and depth, is less affected by a wrong velocity model than a technique that minimizes travel‐time residues. To conclude, we apply the MAXI method to locate earthquakes recorded by the combined Central Weather Bureau of Taiwan (CWB) and the Japanese Meteorological Agency (JMA) networks (1991-2008) within a georealistic a priori 3D P‐velocity model. Hypocenter determinations are selected based on MAXI confidence factors, and earthquake clustering along well‐known tectonic features witnesses hypocenter determination accuracy.
ISSN: 0037-1106

hal-00725227
https://hal.archives-ouvertes.fr/hal-00725227
DOI : 10.1785/0120100311

Éditeur(s) : Eastern Caribbean Center Eastern Caribbean Center ( University of the Virgin Islands, Eastern Caribbean Center )
Résumé : Content: Economic and social benefits of marine resource management in the Caribbean / by Callum M. Roberts, Julie P. Hawkins, and Joshua S. Nowlis -- Environmental management : policies, programs and projects / by Carol James -- Contribution des aires protegees au developpement durable dans les micro-etats de la Caraibe / by Jacques Portecop -- The convention of biological diversity : implications for the sustainable development of Caribbean microstates / by Yvonne L. St. Hill -- Environment and development in the small-island countries : the OECS experience / by Brian Challenger -- Tourism and sustainable development in the Caribbean : trade-offs or complements / by Ededet A. Iniama.

Droits : All rights reserved by the source institution.
TD 171.5 .C27 S62
http://ufdc.ufl.edu/AA00024427/00001

Éditeur(s) : Public Library Science
Résumé : The European Union and other states are moving towards Ecosystem Based Fisheries Management to balance food production and security with wider ecosystem concerns. Fishing is only one of several sectors operating within the ocean environment, competing for renewable and non-renewable resources that overlap in a limited space. Other sectors include marine mining, energy generation, recreation, transport and conservation. Trade-offs of these competing sectors are already part of the process but attempts to detail how the seas are being utilised have been primarily based on compilations of data on human activity at large spatial scales. Advances including satellite and shipping automatic tracking enable investigation of factors influencing fishers' choice of fishing grounds at spatial scales relevant to decision-making, including the presence or avoidance of activities by other sectors. We analyse the determinants of English and Welsh scallop-dredging fleet behaviour, including competing sectors, operating in the eastern English Channel. Results indicate aggregate mining activity, maritime traffic, increased fishing costs, and the English inshore 6 and French 12 nautical mile limits negatively impact fishers' likelihood of fishing in otherwise suitable areas. Past success, net-benefits and fishing within the 12 NM predispose fishers to use areas. Systematic conservation planning has yet to be widely applied in marine systems, and the dynamics of spatial overlap of fishing with other activities have not been studied at scales relevant to fisher decision-making. This study demonstrates fisher decision-making is indeed affected by the real-time presence of other sectors in an area, and therefore trade-offs which need to be accounted for in marine planning. As marine resource extraction demands intensify, governments will need to take a more proactive approach to resolving these trade-offs, and studies such as this will be required as the evidential foundation for future seascape planning.
Plos One (1932-6203) (Public Library Science), 2015-01-27 , Vol. 10 , N. 1 , P. 1-14

Droits : 2015 Tidd et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
http://archimer.ifremer.fr/doc/00254/36518/35064.pdf
DOI:10.1371/journal.pone.0116335
http://archimer.ifremer.fr/doc/00254/36518/

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : Growth defense tradeoff theory predicts that plants in low-resource habitats invest more energy in defense mechanisms against natural enemies than growth, whereas plants in high-resource habitats can afford higher leaf loss rates. A less-studied defense against herbivores involves the synchrony of leaf production, which can be an effective defense strategy if leaf biomass production exceeds the capacity of consumption by insects. The aim of this study was to determine whether leaf synchrony varied across habitats with different available resources and whether insects were able to track young leaf production among tree habitat specialists in a tropical forest of French Guiana. We predicted that high-resource habitats would exhibit more synchrony in leaf production due to the low cost and investment to replace leaf tissue. We also expected closer patterns of leaf synchrony and herbivory within related species, assuming that they shared herbivores. We simultaneously monitored leaf production and herbivory rates of five pairs of tree species, each composed of a specialist of terra firme or white-sand forests within the same lineage. Our prediction was not supported by the strong interaction of habitat and lineage for leaf synchrony within individuals of the same species; although habitat specialists differed in leaf synchrony within four of five lineages, the direction of the effect was variable. All species showed short time lags for the correlation between leaf production and herbivory, suggesting that insects are tightly tracking leaf production, especially for the most synchronous species. Leaf synchrony may provide an important escape defense against herbivores, and its expression appears to be constrained by both evolutionary history and environmental factors.
ISSN: 1385-0237

hal-01204221
https://hal.archives-ouvertes.fr/hal-01204221
DOI : 10.1007/s11258-013-0290-y
PRODINRA : 288500

Éditeur(s) : HAL CCSD Public Library of Science
Résumé : International audience
Regeneration of artificially induced lesions was monitored in nubbins of the branching coral Acropora muricata at two reef-flat sites representing contrasting environments at Réunion Island (21u079S, 55u329E). Growth of these injured nubbins was examined in parallel, and compared to controls. Biochemical compositions of the holobiont and the zooxanthellae density were determined at the onset of the experiment, and the photosynthetic efficiency (F v /F m) of zooxanthellae was monitored during the experiment. Acropora muricata rapidly regenerated small lesions, but regeneration rates significantly differed between sites. At the sheltered site characterized by high temperatures, temperature variations, and irradiance levels, regeneration took 192 days on average. At the exposed site, characterized by steadier temperatures and lower irradiation, nubbins demonstrated fast lesion repair (81 days), slower growth, lower zooxanthellae density, chlorophyll a concentration and lipid content than at the former site. A trade-off between growth and regeneration rates was evident here. High growth rates seem to impair regeneration capacity. We show that environmental conditions conducive to high zooxanthellae densities in corals are related to fast skeletal growth but also to reduced lesion regeneration rates. We hypothesize that a lowered regenerative capacity may be related to limited availability of energetic and cellular resources, consequences of coral holobionts operating at high levels of photosynthesis and associated growth.
ISSN: 1932-6203

hal-01369712
http://hal.univ-reunion.fr/hal-01369712
http://hal.univ-reunion.fr/hal-01369712/document
http://hal.univ-reunion.fr/hal-01369712/file/journal.pone.0072618.PDF
DOI : 10.1371/journal.pone.0072618

Éditeur(s) : HAL CCSD Wiley
Résumé :  
Evaluating the genetic architecture of sexual dimorphism can aid our understanding of the extent to which shared genetic control of trait variation versus sex-specific control impacts the evolutionary dynamics of phenotypic change within each sex. We performed a QTL analysis on Silene latifolia to evaluate the contribution of sex-specific QTL to phenotypic variation in 46 traits, whether traits involved in trade-offs had colocalized QTL, and whether the distribution of sex-specific loci can explain differences between the sexes in their variance/covariance matrices. We used a backcross generation derived from two artificial-selection lines. We found that sex-specific QTL explained a significantly greater percent of the variation in sexually dimorphic traits than loci expressed in both sexes. Genetically correlated traits often had colocalized QTL, whose signs were in the expected direction. Lastly, traits with different genetic correlations within the sexes displayed a disproportionately high number of sex-specific QTL, and more QTL co-occurred in males than females, suggesting greater trait integration. These results show that sex differences in QTL patterns are congruent with theory on the resolution of sexual conflict and differences based on G-matrix results. They also suggest that trade-offs and trait integration are likely to affect males more than females.
ISSN: 0014-3820

hal-01032136
https://hal.archives-ouvertes.fr/hal-01032136
DOI : 10.1111/j.1558-5646.2010.01048.x

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
This paper aims to present an overview on the influence of rheological heterogeneity and mechanical anisotropy on the deformation of continents. After briefly recapping the concept of rheological stratification of the lithosphere, we discuss two specific issues: (1) as supported by a growing body of geophysical and geological observations, crust=mantle mechanical coupling is usually efficient, especially beneath major transcurrent faults which probably crosscut the lithosphere and root within the sublithospheric mantle; and (2) in most geodynamic environments, mechanical properties of the mantle govern the tectonic behaviour of the lithosphere. Lateral rheological heterogeneity of the continental lithosphere may result from various sources, with variations in geothermal gradient being the principal one. The oldest domains of continents, the cratonic nuclei, are characterized by a relatively cold, thick, and consequently stiff lithosphere. On the other hand, rifting may also modify the thermal structure of the lithosphere. Depending on the relative stretching of the crust and upper mantle, a stiff or a weak heterogeneity may develop. Observations from rift domains suggest that rifting usually results in a larger thinning of the lithospheric mantle than of the crust, and therefore tends to generate a weak heterogeneity. Numerical models show that during continental collision, the presence of both stiff and weak rheological heterogeneities significantly influences the large-scale deformation of the continental lithosphere. They especially favour the development of lithospheric-scale strike-slip faults, which allow strain to be transferred between the heterogeneities. An heterogeneous strain partition occurs: cratons largely escape deformation, and strain tends to localize within or at the boundary of the rift basins provided compressional deformation starts before the thermal heterogeneity induced by rifting are compensated. Seismic and electrical conductivity anisotropies consistently point towards the existence of a coherent fabric in the lithospheric mantle beneath continental domains. Analysis of naturally deformed peridotites, experimental deformations and numerical simulations suggest that this fabric is developed during orogenic events and subsequently frozen in the lithospheric mantle. Because the mechanical properties of single-crystal olivine are anisotropic, i.e. dependent on the orientation of the applied forces relative to the dominant slip systems, a pervasive fabric frozen in the mantle may induce a significant mechanical anisotropy of the whole lithospheric mantle. It is suggested that this mechanical anisotropy is the source of the so-called tectonic inheritance, i.e. the systematic reactivation of ancient tectonic directions; it may especially explain preferential rift propagation and continental break-up along pre-existing orogenic belts. Thus, the deformation of continents during orogenic events results from a trade-off between tectonic forces applied at plate boundaries, plate geometry, and the intrinsic properties (rheological heterogeneity and mechanical anisotropy) of the continental plates.
ISSN: 0040-1951

hal-01389719
http://hal.univ-reunion.fr/hal-01389719
http://hal.univ-reunion.fr/hal-01389719/document
http://hal.univ-reunion.fr/hal-01389719/file/vauchez_etal_rheology_1998_hal.pdf
DOI : 10.1016/S0040-1951(98)00137-1

Éditeur(s) : HAL CCSD Royal Society, The
Résumé : Species engaged in multiple, simultaneous mutualisms are subject to trade-offs in their mutualistic investment if the traits involved in each interaction are overlapping, which can lead to conflicts and affect the longevity of these associations. We investigate this issue via a tripartite mutualism involving an ant plant, two competing ant species and a fungus the ants cultivate to build galleries under the stems of their host plant to capture insect prey. The use of the galleries represents an innovative prey capture strategy compared with the more typical strategy of foraging on leaves. However, because of a limited worker force in their colonies, the prey capture behaviour of the ants results in a trade-off between plant protection (i.e. the ants patrol the foliage and attack intruders including herbivores) and ambushing prey in the galleries, which has a cascading effect on the fitness of all of the partners. The quantification of partners' traits and effects showed that the two ant species differed in their mutualistic investment. Less investment in the galleries (i.e. in fungal cultivation) translated into more benefits for the plant in terms of less herbivory and higher growth rates and vice versa. However, the greater vegetative growth of the plants did not produce a positive fitness effect for the better mutualistic ant species in terms of colony size and production of sexuals nor was the mutualist compensated by the wider dispersal of its queens. As a consequence, although the better ant mutualist is the one that provides more benefits to its host plant, its lower host–plant exploitation does not give this ant species a competitive advantage. The local coexistence of the ant species is thus fleeting and should eventually lead to the exclusion of the less competitive species.
ISSN: 0962-8452

hal-01608641
https://hal.archives-ouvertes.fr/hal-01608641
DOI : 10.1098/rspb.2016.1679
PRODINRA : 405078

Éditeur(s) : University of Tasmania, Université de Bretagne Occidentale
Résumé : Empirical evidence and the theoretical literature both point to stock sustainability and the protection of marine biodiversity as important fisheries management issues. Decision-support tools are increasingly required to operationalize the ecosystem-based approach to fisheries management. These tools need to integrate (i) ecological and socio-economic drivers of changes in fisheries and ecosystems; (ii) complex dynamics; (iii) deal with various sources of uncertainty; and (iv) incorporate multiple, rather than single objectives. The stochastic co-viability approach addresses the trade-offs associated with balancing ecological, economic and social objectives throughout time, and takes into account the complexity and uncertainty of the dynamic interactions which characterize exploited ecosystems and biodiversity. This thesis proposes an application of this co-viability approach to the sustainable management of mixed fisheries, using two contrasting case studies: the French Bay of Biscay (BoB) demersal mixed fishery and the Australian Northern Prawn Fishery (NPF). Both fisheries entail direct and indirect impacts on mixed species communities while also generating large economic returns. Their sustainability is therefore a major societal concern. A dynamic bio-economic modelling approach is used to capture the key biological and economic processes governing these fisheries, combining age- (BoB) or size- (NPF) structured models of multiple species with recruitment uncertainty, and multiple fleets (BoB) or fishing strategies (NPF). Economic uncertainties relating to input and output prices are also considered. The bioeconomic models are used to investigate how the fisheries can operate within a set of constraints relating to the preservation of Spawning Stock Biomasses (BoB) or Spawning Stock Size Indices (NPF) of a set of key target species, maintenance of the economic profitability of various fleets (BoB) or the fishery as a whole (NPF), and limitation of fishing impacts on the broader biodiversity (NPF), under a range of alternative scenarios and management strategies. Results suggest that under a status quo strategy both fisheries can be considered as biologically sustainable, while socio-economically (and ecologically in the NPF case) at risk. Despite very different management contexts and objectives, viable management strategies suggest a reduction in the number of vessels in both cases. The BoB simulations allow comparison of the trade-offs associated with different allocations of this decrease across fleets. Notably, co-viability management strategies entail a more equitable allocation of effort reductions compared to strategies aiming at maximizing economic yield. In the NPF, species catch diversification strategies are shown to perform well in controlling the levels of economic risk, by contrast with more specialized fishing strategies. Furthermore analyses emphasize the importance to the fishing industry of balancing global economic performance with inter-annual economic variability. Promising future developments based on this research involve the incorporation of a broader set of objectives including social dimensions, as well as the integration of ecological interactions, to better address the needs of ecosystem-based approaches to the sustainable harvesting of marine biodiversity.
L’objectif général de la thèse est de modéliser les principaux processus biologiques et économiques régissant des pêcheries multi-espèces et multi-flottilles afin de proposer des stratégies viables pour la gestion durable de ces pêcheries mixtes, dans un contexte stochastique et multiobjectif. Plus spécifiquement, cette thèse utilise des analyses de co-viabilité stochastique pour étudier les arbitrages entre des objectifs contradictoires de gestion (conservation, et viabilité économique et sociale) des pêcheries mixtes. Deux pêcheries mixtes sont analysées dans cette thèse: la pêcherie française mixte démersale du golfe de Gascogne et la pêcherie crevettière australienne du Nord (NPF). Ces deux pêcheries sont multi-espèces, et utilisent des stratégies multiples de pêche, induisant des impacts directs et indirects sur les écosystèmes. Cette thèse propose une application de la co-viabilité stochastique à ces deux cas, en prenant en compte leur histoire, leur contexte socio-politique et les différences dans les stratégies et objectifs de gestion. Les résultats suggèrent que le status quo peut être considéré comme une stratégie biologiquement durable mais socio économiquement à risque dans les deux pêcheries (ainsi qu’à risque écologique dans le cas de la pêcherie australienne). Les simulations réalisées pour le golfe de Gascogne permettent de comparer les arbitrages associés à différentes réductions de capacités par flottille et de montrer qu’il existe des solutions de gestion permettant la co-viabilité du système (viabilité biologique des différentes espèces considérées et viabilité socio-économique des flottilles) contrairement à des stratégies de gestion mono-spécifiques ou basées sur la maximisation de la rente. Dans la pêcherie crevettière australienne, l’analyse montre que les stratégies de diversification permettent de limiter le risque économique contrairement aux stratégies plus spécialisées.

Droits : UBO, Univ. Tasmania
http://archimer.ifremer.fr/doc/00206/31731/30134.pdf
http://archimer.ifremer.fr/doc/00206/31731/

Éditeur(s) : HAL CCSD The Royal Society
Résumé : International audience
Conservation commonly requires trade-offs between social and ecological goals. For tropical small-scale fisheries, spatial scales of socially appropriate management are generally small— the median no-take locally managed marine area (LMMA) area throughout the Pacific is less than 1 km 2. This is of particular concern for large coral reef fishes, such as many species of grouper, which migrate to aggregations to spawn. Current data suggest that the catchment areas (i.e. total area from which individuals are drawn) of such aggregations are at spatial scales that preclude effective community-based management with no-take LMMAs. We used acoustic telemetry and tag-returns to examine reproductive migrations and catchment areas of the grouper Epinephelus fuscoguttatus at a spawning aggregation in Papua New Guinea. Protection of the resultant catchment area of approximately 16 km 2 using a no-take LMMA is socially untenable here and throughout much of the Pacific region. However, we found that spawning migrations were skewed towards shorter distances. Consequently, expanding the current 0.2 km 2 no-take LMMA to 1–2 km 2 would protect approximately 30–50% of the spawning population throughout the non-spawning season. Contrasting with current knowledge, our results demonstrate that species with moderate reproductive migrations can be managed at scales congruous with spatially restricted management tools.
ISSN: 2054-5703

Droits : http://creativecommons.org/licenses/by/
hal-01297717
https://hal-univ-perp.archives-ouvertes.fr/hal-01297717
https://hal-univ-perp.archives-ouvertes.fr/hal-01297717/document
https://hal-univ-perp.archives-ouvertes.fr/hal-01297717/file/150694.full.pdf
DOI : 10.1098/rsos.150694

Éditeur(s) : Elsevier Science Bv
Résumé : Sustainable management of natural resources, and in particular fisheries, must take into account several conflicting objectives. This is the case in the French Guiana shrimp fishery for which profitability objectives imply a reduction in the fishing activity. On the one hand, this fishery has negative externalities on marine biodiversity due to discards. On the other hand, this fishery has positive externalities on the economy of the local community and interestingly enough on a protected seabird species in the area (the Frigatebird that feeds on discards). In this paper, we examine the viability of that system considering two sustainability objectives: an economic objective in terms of the profitability of the fishing activity, and a conservation objective in terms of the Frigatebird population. For that purpose, we have developed a dynamic model of that bioeconomic system and study here the trade-offs between the two conflicting objectives. It provides a means to quantify the necessary give and takes involving the economic and ecological objectives that would ensure a viable management solution. Our study confirms the relevance of the viability approach to address natural resource management issues, which should lead to the development of new tools for the arbitration of conflicting sustainability, objectives. In particular, such tools could be used as a quantitative basis for cost-benefit analysis taking into account environmental externalities. (C) 2009 Elsevier B.V. All rights reserved.
Ecological Economics (0921-8009) (Elsevier Science Bv), 2009-10 , Vol. 68 , N. 12 , P. 2960-2968

Droits : 2009 Elsevier Ltd All rights reserved.
http://archimer.ifremer.fr/doc/00020/13135/10195.pdf
DOI:10.1016/j.ecolecon.2009.06.012
http://archimer.ifremer.fr/doc/00020/13135/

Éditeur(s) : HAL CCSD Springer Verlag/EDP Sciences
Résumé : International audience
Context: Woodcutting is a very old technology but scientific research is scarce on the subject. In the last 50 years much work on basic mechanisms as well as industrial processes has been done in France. Aims: The specific nature of wood introduces strong differences between wood and metal cutting processes. The paper focuses on French teams' contributions. Results: The basic aspects of the tool–material interaction for different basic modes in woodcutting are highlighted. In primary conversion such as sawing, veneer cutting or green wood chipping, huge progress comes from automation and the possibility of linking the process to log and product quality through new sensors. In secondary processing much has been done on the links between the cutting process, surface qualification and the properties of these surfaces for further processing, such as gluing or coating. Tool wear depends on the cutting process, timber quality, and species. Trade-offs are required in tool technology and coating technologies may improve tool life. Conclusion: A large amount of knowledge and innovation has come from 50 years of worldwide research effort, with France being particularly active in this period. The transfer of skills from metals cutting industry was often a key, but much is needed to move closer to both metal cutting sector and woodcutting skills among craftsmen.
ISSN: 1286-4560

hal-01135156
https://hal.archives-ouvertes.fr/hal-01135156
https://hal.archives-ouvertes.fr/hal-01135156/document
https://hal.archives-ouvertes.fr/hal-01135156/file/Wood_machining_focus_French_research_Thibaut_al_2015.pdf
DOI : 10.1007/s13595-015-0460-2

Éditeur(s) : Springer
Résumé : Terrestrial and marine biodiversity provides the basis for both ecosystems functioning and numerous commodities or services that underpin human well-being. From several decades, alarming trends have been reported worldwide for both biodiversity and ecosystem services. Therefore the sustainable management of biodiversity requires a double viewpoint balancing ecological conservation with the welfare of human societies. Understanding the underlying trade-offs, synergies and interactions imposes the development of interdisciplinary researches and methods. In that respect, bio-economic or ecological economic modeling is likely to play a major role. The present paper intends to elicit the key features, strengths and challenges of bio-economic approaches especially in mathematical and computational terms. It first recall the main bio-economic methods, models and decisional instruments used in these types of analyses. Then the paper shows to what extent bio-economic sustainability lies between equilibrium, viability and optimality mathematical frameworks. It ends up by identifying new major challenges among which the operationalization of ecosystem based management, the precautionary principle and the implementation of governance are especially important. Computational Management Science Computational Management Science Look Inside
Computational Management Science (1619-697X) (Springer), 2013-12 , Vol. 10 , N. 4 , P. 353-364

Droits : Springer-Verlag Berlin Heidelberg 2013
http://archimer.ifremer.fr/doc/00171/28208/26510.pdf
DOI:10.1007/s10287-013-0194-2
http://archimer.ifremer.fr/doc/00171/28208/

Éditeur(s) : HAL CCSD
Résumé : The purpose of this work is to specify the deformation offshore East of Taiwan by characterizing major active faults in particular at the level of the Ryukyu forearc. The major problem associated with the study of this region is that earthquakes are located outside the permanent networks. Consequently, this led to some unprecise earthquake locations limiting tectonic and statistical analyses, and therefore the correct estimation of the seismic hazard. This work is included in the project ANR ACTS (Active Tectonics and Seismic Hazard in Taiwan). To achieve this goal, we worked on three different timescales for which a different localization method has been proposed to obtain a clear image of seismic deformation and highlight major faults offhore East of Taiwan. First, at the scale of the century (from the analysis of a seismicity catalogue with homogeneous magnitude), the instrumental historical earthquakes (1897-2007) show that the Ryukyu margin was affected by 6 earthquakes of magnitude greater than 7 with 4 of them for which the responsible fault is unknown. We propose a method of relative location to relocate the historic events from the time difference of P and S arrival times (Ts-Tp) at each station. The location is obtained by searching for "analogue" earthquakes in the recent instrumental catalogue (1991-2008) for which Ts-Tp at each station is close. This method has been applied to the largest (in terms of magnitude) earthquake ever recorded in Taiwan, the earthquake of June 5, 1920 (M7.7 +/- 0.2). A rupture along the interplate of the Ryukyu subduction with a possible nucleation at the downdip limit of a splay-fault is certainly responsible of this earthquake. Then, at the scale of the decade, the improvement of the method of absolute location based on MAXimum of Intersection of EDT (MAXI, EDT: Equal Differential Time) allows to better extract the erroneous arrival times and prevents the "trade-off" between depth and origin time, and between depth and epicentral position when the azimuthal coverage is low (gap Azimuthal > 180degre). Synthetic tests show the effectiveness of MAXI (using P-wave only) to determine the parameters x, y and z even when the azimuthal gap is important. In the latter case, the quality of the results is dependent on the velocity model to represent the 3D structure of the Earth. We propose an approach involving the use of a 3D a priori P-wave velocity model to locate earthquakes which are lateral and remote to the seismic network. An application to the case of Taiwan and Ecuador validates this approach. Finally, at the level of a few months, the marine geophysical campaign RATS (Ryukyu Arc: Tectonics and Seismology) was conducted in two stages. A passive seismology experiment from July to October, 2008 (RATS1) has been conducted over the forearc of the Ryukyus and then active seismic experiment (refraction and reflection) was conducted in May 2009 in a NNE - SSW line through the Ryukyu margin. These two combined experiments allow improving our knowledge about the crustal structure of the margin. At the level of the forearc, the basement of the forearc is characterized by vertical backstop and a very deformed basis certainly associated with a significant out of sequence deformation. In depth, the downgoing plate is certainly affected by a tear that controls the seismicity in the region of transition between the subduction and collision.
Le but de ce travail est de préciser la déformation en mer à l'est de Taïwan et de notamment caractériser les failles actives majeures en particulier au niveau de l'avant-arc des Ryukyus. Le problème majeur associé à l'étude de cette région est que les séismes sont localisés en dehors des réseaux permanents et que cela conduit à des localisations peu précises limitant les analyses statistiques, tectoniques et donc l'estimation correcte de l'aléa sismique. Ce travail est inclus dans le projet ANR ACTS (Active Tectonics and Seismic Hazard in Taiwan). Pour atteindre cet objectif, nous travaillons à trois échelles de temps différentes pour lesquelles une méthode de localisation différente a été proposée pour obtenir une image précise de la déformation sismique et mettre en évidence les failles majeures en mer à l'est de Taïwan. D'abord, à l'échelle du siècle (à partir de l'analyse d'un catalogue de sismicité homogène en magnitude), les séismes historiques instrumentaux (1897-2007) montrent que la marge des Ryukyus a été affectée par 6 séismes de magnitude supérieure à 7 dont 4 pour lesquels la faille responsable n'est pas connue. Nous proposons une méthode de localisation relative qui permet de relocaliser les évènements historiques à partir des différences de temps d'arrivées P et S (Ts-Tp) à chaque station. La localisation est obtenue en recherchant les séismes analogues dans le catalogue instrumental récent (1991-2008) pour lesquels Ts-Tp à chaque station est proche. Cette méthode a été appliquée au plus gros séisme (en terme de magnitude) jamais enregistré à Taïwan, le séisme du 5 juin 1920 (M7.7 $pm$ 0.2). Ce séisme a certainement pour origine une rupture sur l'interplaque sismogène de la subduction des Ryukyus avec une possible nucléation à la base d'une faille hors-séquence. Ensuite, à l'échelle de la dizaine d'années, l'amélioration de la méthode de localisation absolue du MAXimum d'Intersection EDT (MAXI, EDT: Equal Differential Time) permet de mieux extraire les temps d'arrivées erronés et empêche les "trade-off" entre profondeur et temps d'origine et, entre profondeur et position épicentrale lorsque la couverture azimutale est faible (gap azimutal > 180°). Des tests synthétiques montrent l'efficacité de MAXI (en utilisant les ondes P uniquement) à déterminer les paramètres x, y et z même lorsque le gap azimutal est important. Dans ce dernier cas, la qualité des résultats reste dépendant du modèle de vitesse à représenter la structure 3D de la Terre. Nous proposons une démarche associant l'utilisation d'un modèle de vitesse des ondes P 3D a priori avec la méthode MAXI pour localiser les séismes qui sont latéraux et éloignés du réseau. Une application au cas de Taïwan et en Équateur valide cette approche. Enfin, à l'échelle de quelques mois, la campagne de géophysique marine RATS (Ryukyu Arc: Tectonics and Seismology) a été menée en deux temps. Une expérience de sismologie passive de juillet à octobre 2008 (RATS1) a été menée au-dessus de l'avant-arc des Ryukyus puis une expérience de sismique active (réfraction et réflexion) a été menée en mai 2009 sur une ligne NNE-SSW à travers la marge des Ryukyus. Ces deux expériences combinées permettent d'améliorer notre connaissance de la structure crustale de la marge. Au niveau de l'avant-arc, le socle de l'avant-arc est caractérisé par une extrémité formant un butoir vertical et une base très déformée certainement associée à une importante déformation hors-séquence. En profondeur, la plaque plongeante est certainement affectée par une déchirure qui contrôle la sismicité dans cette région de transition entre la subduction et la collision.
https://tel.archives-ouvertes.fr/tel-00660737

tel-00660737
https://tel.archives-ouvertes.fr/tel-00660737
https://tel.archives-ouvertes.fr/tel-00660737/document
https://tel.archives-ouvertes.fr/tel-00660737/file/Thesis_small.pdf

Éditeur(s) : HAL CCSD PeerJ
Résumé : International audience
The adaptative bleaching hypothesis (ABH) states that, depending on the symbiotic flexibility of coral hosts (i.e., the ability of corals to ''switch'' or ''shuffle'' their algal symbionts), coral bleaching can lead to a change in the composition of their associated Symbiodinium community and, thus, contribute to the coral's overall survival. In order to determine the flexibility of corals, molecular tools are required to provide accurate species delineations and to detect low levels of coral-associated Symbiodinium. Here, we used highly sensitive quantitative (real-time) PCR (qPCR) technology to analyse five common coral species from Moorea (French Polynesia), previously screened using only traditional molecular methods, to assess the presence of low-abundance (background) Symbiodinium spp. Similar to other studies, each coral species exhibited a strong specificity to a particular clade, irrespective of the environment. In addition, however, each of the five species harboured at least one additional Symbiodinium clade, among clades A–D, at background levels. Unexpectedly, and for the first time in French Polynesia, clade B was detected as a coral symbiont. These results increase the number of known coral-Symbiodinium associations from corals found in French Polynesia, and likely indicate an underestimation of the ability of the corals in this region to associate with and/or ''shuffle'' different Symbiodinium clades. Altogether our data suggest that corals from French Polynesia may favor a trade-off between optimizing symbioses with a specific Symbiodinium clade(s), maintaining associations with particular background clades that may play a role in the ability of corals to respond to environmental change. How to cite this article Rouzé et al. (2017), An updated assessment of Symbiodinium spp. that associate with common scleractinian corals from Moorea (French Polynesia) reveals high diversity among background symbionts and a novel finding of clade B.
ISSN: 2167-8359

Droits : info:eu-repo/semantics/OpenAccess
hal-01430294
https://hal-sde.archives-ouvertes.fr/hal-01430294
https://hal-sde.archives-ouvertes.fr/hal-01430294/document
https://hal-sde.archives-ouvertes.fr/hal-01430294/file/Rouze-2017-PeerJ-Updated.pdf
DOI : 10.7717/peerj.2856

Éditeur(s) : HAL CCSD Springer-Verlag Berlin Heidelberg
Résumé : International audience
The main biological function of reaction wood is to act as " muscle " for trees, enabling them to control their posture. The key property to achieve this function is the development of high mechanical stress during the formation of reaction wood cells, called " maturation strains ". Actually, reaction wood formation is basically the asymmetric formation of wood around the tree circumference, with higher maturation strains on the side where reaction wood is formed than on the opposite side. This asymmetry enables stems to bend upward or to compensate for the downward bending induced by gravity. At the cross section level, the performance in this biological function is linked not only to the magnitude of this asymmetry but also to an effect of the cross-sectional size (diameter) of the stem. Eccentric growth and variations in wood mechanical stiffness are second order effects that can modify this performance. Differences in maturation strains between reaction and non-reaction woods are related to their specific cell wall structure and composition. The swelling of the cell wall matrix during maturation and the effect of microfibril angle explain the differences in maturation strains between normal and compression wood. However, this mechanism fails in explaining the high maturation shrinkage of tension wood, and several hypotheses at the molecular levels are still under debate. How trees perceive their gravitational disequilibrium is also an open question for physiologists. Integrative biomechanical modelling (from the polymer level to the cell wall, cross section and whole tree levels) enables defining key variables that explain the performance of reaction wood as a system that insures the stem motricity. Maturation strains can be precisely measured only in recently formed wood at the tree surface, but their changes during the whole tree life can also be estimated by retrospective dendrochronological analysis through structural markers of reaction wood. Lastly, wood in living trees ensures general storage, defence, vascular and skeletal functions, that ask general questions about synergies and trade-offs as the structural characteristics of reaction wood can affect all these functions.
The Biology of Reaction Wood

ISBN : 978-3-642-10813-6
hal-01452085
https://hal.archives-ouvertes.fr/hal-01452085
https://hal.archives-ouvertes.fr/hal-01452085/document
https://hal.archives-ouvertes.fr/hal-01452085/file/Chap_Gril_al_Biomechanical_action_biological_functions_2014.pdf