Éditeur(s) : Université de Montpellier II
Résumé : The sea bass, Dicentrarchus labrax, has been subjected to intensive aquaculture on the Mediterranean cost for ten years. Marine fish hatcheries are key factors in the aquaculture field, and face different pathologies, especially one of viral origin (nodavirus) that could challenge their feasibility. Consequently, we have tried to provide some data on larvae and spawning stocks. Firstly, we have studied the immunoglobulins, components of the specific humoral immunity, and their role as antibodies. On adult basses, these immunoglobulins are tetrameric molecules with high molecular weight (850 kD), made of heavy (H) - 80 kD and light (L) - 26 kD chains. In the eggs, simplest forms such as monomeric or dimeric are brought to the fore; they are located under the chorionic membrane. Secondly, we have studied the development of the immunity system on larvae, preparing IgM assays with ELISA method, the study on the organogenesis of the main lymphoid organs, and using flow cytometry for the ontogenesis of IgM producing cell. Based on this experience, we can propose a date for the immunocompetence onset of the bar, i.e. from the 54th day of the hatchery phase. Finally, we made the most of these different results to study a viral pathology (nodavirus) in spawners and larvae. We defined an experimental contamination model for larvae and eggs, and we highlighted that eggs born from vaccinated hen fishes were protected against the nodavirus.
Le bar, Dicentrarchus labrax, fait l'objet d'une aquaculture intensive sur le littoral Méditerranéen depuis une dizaine d'années. Les écloseries marines représentent un des maillons clefs de cette filière aquacole, et sont confrontées à différentes pathologies, dont une d'origine virale (nodavirus), pouvant remettre en cause leur faisabilité. Aussi, nous avons tenté d'apporter quelques données concernant la protection des larves et des géniteurs reproducteurs. Dans un premier temps, nous avons étudié les immunoglobulines, éléments de l'immunité spécifique humorale ainsi que leur rôle anticorps. Chez les bars adultes ces immunoglobulines sont des molécules tétramériques de haut poids moléculaire (850 kD), composées de chaînes lourdes (H) de 80 kD et légères (L) de 26 kD. Dans les oeufs, des formes plus simples, monomériques ou dimériques, sont mises en évidence et sont localisées sous la membrane chorionique. Dans un second temps, nous avons étudié la mise en place du système immunitaire spécifique chez les larves, en effectuant le dosage des IgM par ELISA, l'étude de l'organogenèse des principaux organes lymphoïdes, puis celle de l'ontogenèse des cellules productrices d'IgM par cytométrie de flux. L'ensemble de cette étude nous permet de proposer une date d'acquisition de l'immunocompétence à partir du 54ème jour d'élevage chez le bar. Enfin, ces différents résultats ont été mis à profit dans le cadre d'une pathologie virale (nodavirus) touchant les reproducteurs et les larves. Après avoir défini un modèle de contamination expérimental des larves et des oeufs, nous avons mis en évidence une protection des oeufs lorsque ceux-ci proviennent d'une femelle vaccinée (vaccin expérimental) contre le nodavirus.

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/1997/these-1265.pdf
http://archimer.ifremer.fr/doc/00000/1265/

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : International audience
This paper presents a synthesis of a multidisciplinary study carried out along the Nîmes Roman aqueduct, located in the southeast part of France. The study was motivated by archaeologists attempting to explain the partial destructions of only one aerial bridge of the aqueduct (Pont de la Lône). Given its close proximity to the Nîmes seismically active fault, a possible seismic origin for the destructions was invoked. Seismologists and structural engineers thus carried out a variety of field and numerical investigations to test the seismic hypothesis. Supporting field evidence was found first along the aerial bridge section of the aqueduct: broken stalactites, arch warping, cracks and destruction of the bridge just above a breast wall shortly after its construction. Secondly, the underground part of the canal was analysed: irregularity in the thickness of calcite deposits of the canal walls, presence of numerous cracks, horizontal shift of the otherwise linear structure of the canal and presence of calcite twins in the deposits, found only where the canal crosses the Nîmes fault system. Numerical modelling and experimental results show that (1) only the Pont de la Lône would have suffered serious damage under seismic solicitation (assuming an M6 earthquake at 10 km distance). The second aerial bridge, the three levels arches Pont du Gard, an historical monument still standing today, would have suffered less damage, due to its very different fundamental frequency of around 0.4 Hz, far from the amplified seismic near-field spectrum; (2) the numerical models also show that a fall of the canal wall would require a higher magnitude event (M > 6); (3) the presence of calcite twinning requires a differential static stress of 4 MPa or greater, which can only be achieved very close to the fault rupture of a M > 6 earthquake; (4) finally, local surface rupturing of such a fault would also corroborate the hypothesis that the observed offset of the canal may be partly seismically induced. Although other possible origins for each individual evidence may not be excluded, the observed spatiotemporal concentration of architectural/geological anomalies together with the numerical results allow us to support a possible co-seismic origin for these disorders, indirectly attesting to the potential seismic activity (M > 6) of the nearby Nîmes fault. Furthermore, following the conclusions of archaeological studies, the disorders occurred between 250 and 350 year AD, thus providing timing for this possible seismic event, an essential parameter in seismic hazard analysis. These results validate the archaeo-seismological approach as a tool that may help improve the knowledge of major infrequent earthquakes in areas of moderate seismic activity.
ISSN: 0921-030X

hal-00379064
https://hal.archives-ouvertes.fr/hal-00379064
DOI : 10.1007/s11069-008-9276-9

Résumé : Pour beaucoup de cultures, un sol non travaillé est une alternative de plus en plus crédible au travail intensif du sol, en particulier pour des raisons environnementales. Mais l’ananas (ananas comosus) présente un enracinement fragile très sensible à la structure, ce qui motive souvent un travail important du sol avant plantation. L’alternative d’une plantation sans travail du sol ne va donc pas de soi. L’objet de cette thèse est de répondre à la question de la faisabilité d’une culture d’ananas sans travail du sol, en remplaçant ce dernier par une plante de service « décompactante » dont les traits racinaires seraient favorables à la (re)structuration d’un sol compact. Le travail de cette thèse a donc porté sur l’évaluation de plusieurs espèces candidates, puis sur l’étude, au champ, des effets sur le sol de la plus prometteuse (Stylosanthes guianensis ). Enfin, dans le cadre d’un essai au champ comparant un système de culture innovant ananas sans travail du sol, on a étudié l’effet de la plante de service sur le fonctionnement de la culture de l’ananas. Dans un premier essai, c’est le Stylosanthes guianensis qui, comparé à huit autres espèces (Arachis pintoï, Brachiaria decumbens, Cajanus cajan, Crotalaria juncea, Cynodon dactylon, Eleusine coracana, Pueraria phaseoloides, et le maïs), a montré les traits racinaires les plus favorables à la structuration d’un sol compact. Les valeurs supérieures du diamètre racinaire moyen et de la densité de longueur racinaire (DRL) caractérisent les principaux traits impliqués. Dans un deuxième essai, les mesures de conductivité hydraulique, d’indice des vides du sol et d’analyse d’images de blocs de sol imprégné sur la répartition surfacique des différents types de porosité ont montré que la culture du Stylosanthes guianensis avait augmenté l’indice des vides du sol et provoqué l’apparition d’une porosité fissurale de grande taille, contribuant ainsi à l’amélioration de la structure du sol. Enfin, un troisième essai mettant en comparaison (i) un système de culture innovant où la culture d’ananas est implantée sans travail du sol après une culture de S. guianensis restructurante et (ii) un système conventionnel comportant un travail profond du sol (et pas de plante de service) a montré que le rendement en fruit est similaire dans les deux systèmes. Cet essai a permis de vérifier que l’enracinement de l’ananas en condition de sol non travaillé bénéficiait du précédent S. guianensis.
For many crops, direct drilling is a well-tried alternative facing the damaging effects of intensive tillage, mainly for environmental causes. But, pineapple (ananas comosus), presents a fragile rooting system which is very sensitive to soil structure. This leads frequently to intensive soil tillage before planting. Direct drilling is not so evident. The aim of this thesis is to give an answer to the feasibility of a no till system for pineapple cultivation, by using a plant with favorable roots traits for compacted soil (re)structuration. This work consisted in evaluating several candidate species, followed by the study, on the field, of the effects the most promising on soil (Stylosanthes guianensis). Finally, through a field experiment, comparing an innovating no till pineapple cultivation system we studied the use effects of Stylosanthes guianensis on the pineapple crop functioning. In a first experiment, Stylosanthes guianensis compared with eight other species (Arachis pintoï, Brachiaria decumbens, Cajanus cajan, Crotalaria juncea, Cynodon dactylon, Eleusine coracana, Pueraria phaseoloides and corn) showed better roots traits for structuring a compacted soil. Measures of average root diameter and root length density are the main implicated roots traits. In a second experiment, the measures of hydraulic conductivity, of the soil void ratio and the analysis of blocks of resin-impregnated soil on the surface distribution of the different type of porosity, all of this showed that Stylosanthes guianensis had increased the soil void ratio and had caused the creation of large-sized cracked porosity, thus contributing to the improvement of the soil structure. Finally, a third experiment involving a comparison between (i) an innovating cultivation system where pineapple is growing in a no till soil after a structuring crop of S. guianensis and (ii) a conventional system with deep tillage (without structuring crop), showed similar fruit yield. This experiment showed evidence that the rooting of pineapple in no till soil benefited from the previous Stylosanthes.

http://www.theses.fr/2014AGUY0725/document

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : International audience
The upward oil migration in a transparent and rough fracture containing a liquid of higher density is studied experimentally using a light transmission technique. The aperture heterogeneity is also measured by light transmission. The injection of oil in a fracture containing a heavier fluid produces a gravitational fingering instability. Depending on the injection velocity (capillary number, Ca) and the density difference between the two fluids (Bond number, Bo), different patterns are observed during the oil displacements. The width of the finger and its velocity are measured as a function of Bo and Ca. A stability analysis of the interface, based on a generalised Darcy equation in a two-dimensional fracture, allows an accurate description of the experimental results. The order of magnitude of the finger width and its velocity are in good agreement with the calculations, with small disparities due to various unknown fluid flow parameters: capillary pressure, finger thickness in the gap of the fracture, finger tortuosity and oil velocity field into the finger. The theoretical approach allows constructing a (Ca, Bo) phase diagram of stability of the interface.
ISSN: 0169-3913

hal-00429329
https://hal.archives-ouvertes.fr/hal-00429329
DOI : 10.1007/s11242-009-9340-2

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Numerous field studies highlighted the capacities of marine sponges to bioaccumulate trace elements and assessed their potential as biomonitors of the marine environment. Experimental works demonstrated that dissolved metals and radionuclides can be taken up directly by sponge tissues but, to the best of our knowledge, little is known on the contribution of the dietary pathway through the consumption of contaminated bacteria considered as one of the trophic source in sponge diet. Objectives of this work are to study trophic transfer of radiotracers 110mAg, 241Am, 109Cd, 57Co, 134Cs, 54Mn and 65Zn from the marine bacteria Pseudomonas stutzeri to the Mediterranean sponges Aplysina cavernicola and Ircinia oros. P. stutzeri efficiently bioaccumulated trace elements in our culture experimental conditions with CF comprised between 105 and 107 after 48 hours of growth in radiolabeled medium. When fed with these radiolabelled bacteria, A. cavernicola took up around 60% of radiotracers accumulated in trophic source except 134Cs for which only 8% has been transferred from bacteria to sponge. Contrasting to this, I. oros retained only 7% of 110mAg, 109Cd and 65Zn counted in bacteria, but retained 2-fold longer accumulated metals in its tissues. The sponge inter-specific differences of accumulation and depuration following a trophic exposure are discussed with respect to the structure and the clearance capacities of each species.
ISSN: 0045-6535

hal-01217273
https://hal.archives-ouvertes.fr/hal-01217273
https://hal.archives-ouvertes.fr/hal-01217273/document
https://hal.archives-ouvertes.fr/hal-01217273/file/Pub%20Bacteria%20CHEM_HAL.pdf
DOI : 10.1016/j.chemosphere.2015.10.046

Éditeur(s) : HAL CCSD
Résumé : International audience
This communication reports on a field experiment carried out on a microtidal beach in Camargue, France. The analysis is built on the initial work presented by Sous et al. (2016) on swash-groundwater dynamics. The analysis of a cross-shore network of buried pressure sensors allows to monitor the watertable dynamics over the full 2013-2014 winter season. The pressure head gradients are observed to be primarily seaward, forced by a higher level at the landward boundary. The groundwater flux is driven by the relative fluctuations of Still Water Level and inland elevations. Rain and tides have a little effect. A nearly isolated groundwater circulation is driven by wave activity below the swash zone whatever the overall watertable gradient. Estimations of beach groundwater discharge over the Gulf of Beauduc reveal the importance of beach groundwater in the exchanges between coastal aquifer and open sea.
Coastal Dynamics 2017
Helsingor, Denmark

hal-01562908
https://hal.archives-ouvertes.fr/hal-01562908

Éditeur(s) : HAL CCSD Météo et Climat
Résumé : International audience
The Convective and Orographically- induced Precipitation Study (COPS) is a coordinated international project, comprised of an observational field campaign and a research programme aiming to advance the quality of fore- casts of orographically-induced pre- cipitation by four-dimensional obser- vations and modelling of its life cycle. The COPS field campaign took place during June-July-August 2007 over eastern France and south-western Germany. Its main objective was to provide an unprecedented comprehen- sive set of in situ and remotely-sensed meteorological observations of the entire depth of the troposphere. After a short overview of the project, the paper focuses on the French contribution to the COPS field phase, describes the experimental setup and highlights some key observations.
L’étude des précipitations convectives induites par l’orographie (Cops selon l’acronyme anglais) est un projet inter- national coordonné qui comprend une campagne d’observations de terrain et un programme scientifique et qui vise à améliorer la qualité des prévisions des précipitations orographiques convectives à la fois par l’observation quadridimensionnelle et la modélisa- tion de leur cycle de vie. La campagne de terrain s’est déroulée en juin-juillet- août 2007 sur l’est de la France et le sud-ouest de l’Allemagne. Son objectif majeur était de fournir un jeu d’obser- vations météorologiques, in situ et à distance, aussi complet que possible et sur toute la profondeur de la colonne troposphérique.Après une brève revue d’ensemble du projet, l’article se concentre sur la contribution française à la campagne Cops, décrit le dispositif expérimental mis en œuvre et met en valeur quelques observations clés.
ISSN: 0026-1181

insu-01504075
https://hal-insu.archives-ouvertes.fr/insu-01504075
https://hal-insu.archives-ouvertes.fr/insu-01504075/document
https://hal-insu.archives-ouvertes.fr/insu-01504075/file/meteo_2009_64_32.pdf
DOI : 10.4267/2042/23632

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
A shallow field experimental site for CO2 injection was established at Maguelone (Languedoc, France), in order to test in an integrated manner a suite of surface and downhole hydrogeophysical monitoring methods. The objective is to improve monitoring of gas transport in the shallow subsurface and to determine the sensitivity of CO2 monitoring systems for leakage detection. The site offers a natural laboratory to study the processes associated with CO2 injection in a clastic and clay-rich context saturated with saline fluids. Prior to CO2 injection, three nitrogen (N2) injections were undertaken in 2012 to measure the site response to neutral gas injection. In 2013, a volume of 111 m3 (mass of 220 kg) of CO2 was injected during 3.5 h at 15 m depth. During each experiment, the gas plumes were successfully detected from pressure monitoring, time-lapse induction logging and downhole resistivity monitoring with dipole–dipole array. Increases in resistivity are attributed to free gas propagation (either N2 or CO2) whereas decreases in resistivity correlate with CO2 dissolution in the pore fluid. Chemical analyses confirm this hypothesis with a decrease in pH and an increase in the concentration of dissolved species in the latter case.
ISSN: 1750-5836

hal-01355943
https://hal.archives-ouvertes.fr/hal-01355943
DOI : 10.1016/j.ijggc.2015.12.005

Éditeur(s) : Amer Meteorological Soc
Résumé : The Lagrangian Transport Experiment (LATEX) was developed to study the influence of coupled physical and biogeochemical dynamics at the meso- and submesoscales on the transfers of matter and heat between the coastal zone and the open ocean. One of the goals of the Latex10 field experiment, conducted during September 2010 in the Gulf of Lion (northwest Mediterranean), was to mark a dynamical mesoscale feature by releasing a passive tracer [sulfur hexafluoride (SF6)] together with an array of Lagrangian buoys. The goal was to release the tracer in an initial patch as homogeneous as possible in the horizontal, and to study its turbulent mixing and dispersion while minimizing the contribution due to advection. For that, it was necessary to continuously adjust the vessel route in order to remain as closely as possible in the Lagrangian reference frame moving with the investigated mesoscale structure. To accomplish this task, a methodology and software were developed, which are presented here. The software is equipped with a series of graphical and user-friendly accessories and the entire package for MATLAB can be freely downloaded ().
Journal Of Atmospheric And Oceanic Technology (0739-0572) (Amer Meteorological Soc), 2013-08 , Vol. 30 , N. 8 , P. 1940-1950

Droits : 2013 American Meteorological Society
http://archimer.ifremer.fr/doc/00155/26590/24719.pdf
DOI:10.1175/JTECH-D-12-00183.1
http://archimer.ifremer.fr/doc/00155/26590/

Éditeur(s) : HAL CCSD
Résumé : The evolution of mountain belt piedmont is controlled by interactions between tectonics, erosion and sedimentation. To study coupling between these processes, we analyze morphometric data collected in the eastern Tian Shan piedmont (NW China) and develop a new analogue modelling technique. The modeling approach uses an experimental set-up and analog material specifically designed to study simultaneously tectonic structures (faults, folds), detailed morphology (drainage basins, channels, alluvial fans, etc.) and stratified sedimentation. Measurement techniques based on laser interferometry and image correlation are also developed to quantify the topographic and kinematic evolution of models.
Our experiments allow a new approach for the study of piedmont morphotectonic evolution. Our results indicate that tectonics mainly controls this evolution. The propagation of deformation and the formation of relief both significantly influence the development of drainage networks, the evolution of drainage basins and the formation of morphotectonic markers. Particularly, a study of alluvial fans and watershed metrics suggests that there is a dynamical equilibrium between uplift, erosion and morphology. In addition, our results show that terrace nucleation is controlled by thrust activity and hydrography adjustments. Folding of terraces responds to a homothetic deformation pattern.
This new methodology brings promising perspectives in the fields of geomorphology, seismotectonics and sedimentology.
L'évolution d'un piémont de chaîne de montagnes est contrôlée par les interactions entre la tectonique, l'érosion et la sédimentation. Pour étudier ces processus, nous avons analysé des données morphométriques issues des piémonts orientaux du Tian Shan (NW Chine) et développé un nouveau type de modélisation analogique. Cette approche utilise un dispositif et un matériau expérimental spécialement conçus pour modéliser simultanément des structures tectoniques (failles, plis), une morphologie détaillée (bassins versants, rivières, cônes alluviaux, etc.) et une sédimentation stratifiée. Des techniques de mesure optique ont été également mises en oeuvre afin de quantifier l'évolution topographique et cinématique des modèles.
Les expériences réalisées offrent une opportunité inédite d'étudier l'évolution morphotectonique d'un piémont. Nos résultats montrent que la tectonique exerce un contrôle de premier ordre sur cette évolution. La propagation de la déformation et la formation des reliefs influencent en effet significativement le développement du réseau de drainage, l'évolution des bassins versants et la formation des marqueurs morphotectoniques. En particulier, l'analyse de la morphométrie des cônes alluviaux et de leurs bassins versants suggère qu'un équilibre dynamique s'installe entre la surrection, l'érosion et la morphologie. Nos résultats montrent également que l'apparition des terrasses est guidée par l'activité des chevauchements et les adaptations de l'hydrographie. Leur modèle de plissement répond à une déformation homothétique.
Cette nouvelle approche ouvre des perspectives d'étude prometteuses en géomorphologie, sismotectonique et stratigraphie.
https://tel.archives-ouvertes.fr/tel-00339145

tel-00339145
https://tel.archives-ouvertes.fr/tel-00339145
https://tel.archives-ouvertes.fr/tel-00339145v2/document
https://tel.archives-ouvertes.fr/tel-00339145/file/These_Graveleau08.pdf

Éditeur(s) : HAL CCSD
Résumé : International audience
More and more animal species are endangered. In order to study and protect them, several measures have been taken, which now seem to show their limit. This work focuses on the counting process, a key issue for any project that aims to protect animals. Indeed, this paper proposes an algorithm for automatic counting of singing birds in their habitat by using wireless sensors fitted with microphone. Sensors are used to record audio samples of bird songs. These samples are used to extract some kinds of song fingerprint that are thereafter used to recognize the bird species, through a classification process. Afterwards, by analyzing data which have been collected by a central base, the network structure derived from detection fields of sensors, allows our algorithm to propose an estimate of singing birds in the habitat. This paper details the counting algorithm which uses graph theory and audio inputs comparison. Finally, we demonstrate our scheme efficiency through experimentations.
Local Computer Networks (LCN)
Clearwater, United States

hal-00786165
https://hal.archives-ouvertes.fr/hal-00786165
DOI : 10.1109/LCNW.2012.6424060

Éditeur(s) : HAL CCSD Ecological Society of America
Résumé : We investigated the relationship between habitat association and physiological performance in four congeneric species pairs exhibiting contrasting distributions between seasonally flooded and terra firme habitats in lowland tropical rain forests of French Guiana, including Virola and Iryanthera (Myristicaceae), Symphonia (Clusiaceae), and Eperua (Caesalpiniaceae). We analyzed 10-year data sets of mapped and measured saplings (stems 150 cm in height and <10 cm diameter at breast height [dbh]) and trees (stems 10 cm dbh) across 37.5 ha of permanent plots covering a 300-ha zone, within which seasonally flooded areas (where the water table never descends below 1 m) have been mapped. Additionally, we tested the response of growth, survival, and leaf functional traits of these species to drought and flood stress in a controlled experiment. We tested for habitat preference using a modification of the torus translation method. Strong contrasting associations of the species pairs of Iryanthera, Virola, and Symphonia were observed at the sapling stage, and these associations strengthened for the tree stage. Neither species of Eperua was significantly associated with flooded habitats at the sapling stage, but E. falcata was significantly and positively associated with flooded forests at the tree stage, and trees of E. grandiflora were found almost exclusively in nonflooded habitats. Differential performance provided limited explanatory support for the observed habitat associations, with only congeners of Iryanthera exhibiting divergent sapling survival and tree growth. Seedlings of species associated with flooded forest tended to have higher photosynthetic capacity than their congeners at field capacity. In addition, they tended to have the largest reductions in leaf gas exchange and growth rate in response to experimental drought stress and the least reductions in response to experimental inundation. The corroboration of habitat association with differences in functional traits and, to a lesser extent, measures of performance provides an explanation for the regional coexistence of these species pairs. We suggest that specialization to seasonally flooded habitats may explain patterns of adaptive radiation in many tropical tree genera and thereby provide a substantial contribution to regional tree diversity.
ISSN: 0012-9658

hal-01031746
https://hal.archives-ouvertes.fr/hal-01031746

Éditeur(s) : HAL CCSD Royal Society, The
Résumé : Plant leaf litter generally decomposes faster as a group of different species than when individual species decompose alone, but underlyingmechanisms of these diversity effects remain poorly understood. Because resource C : N: P stoichiometry (i.e. the ratios of these key elements) exhibits strong control on consumers, we supposed that stoichiometric dissimilarity of litter mixtures (i.e. the divergence in C : N: P ratios among species) improves resource complementarity to decomposers leading to faster mixture decomposition. We tested this hypothesis with: (i) a wide range of leaf litter mixtures of neotropical tree species varying in C : N: P dissimilarity, and (ii) a nutrient addition experiment (C, N and P) to create stoichiometric similarity. Litter mixtures decomposed in the field using two different types of litterbags allowing or preventing access to soil fauna. Litter mixture mass loss was higher than expected from species decomposing singly, especially in presence of soil fauna. With fauna, synergistic litter mixture effects increased with increasing stoichiometric dissimilarity of litter mixtures and this positive relationship disappeared with fertilizer addition. Our results indicate that litter stoichiometric dissimilarity drives mixture effects via the nutritional requirements of soil fauna. Incorporating ecological stoichiometry in biodiversity research allows refinement of the underlying mechanisms of how changing biodiversity affects ecosystem functioning.
ISSN: 0962-8452

hal-01204222
https://hal.archives-ouvertes.fr/hal-01204222
DOI : 10.1098/rspb.2014.1682
PRODINRA : 289918

Éditeur(s) : HAL CCSD American Meteorological Society
Résumé : Global positioning system (GPS) data from a dense network have been used for the analysis of the diurnal cycle of water vapor over Marseille, France, during the second intensive observation period (IOP2; 21–26 June 2001) of the Expérience sur Sites pour Contraindre les Modèles de Pollution Atmosphérique et de Transport d'Emission (ESCOMPTE) field experiment. Both tomographic analyses and integrated water vapor (IWV) contents from GPS have been used, in addition to wind profiler data and surface observations. Tomographic analysis of data from the dense GPS network and radiosondes provided the continuous temporal evolution of the vertical distribution of water vapor over the city of Marseille. The city is located on the shore of the Mediterranean Sea in southeastern France and is often under the influence of sea-breeze effects. Two different layers of breeze circulation are identified: a shallow sea breeze, blowing perpendicular to the local coastline, and a deep sea breeze, induced by the regional temperature gradient between sea and land. The origin of water vapor is shown to be mainly due to the advection of marine moist air by these sea-breeze circulations. However, the diurnal cycle of water vapor over Marseille is strongly influenced by the synoptic situation, which changes during the IOP2 (between a northerly mistral in the early stage of the IOP and an easterly wind at the end). It is shown that vertical profiles from tomographic analyses (combined with wind profiler data) allow for a proper interpretation of the diurnal cycle observed in IWV. Two-dimensional maps of IWV are also shown to complement the description of the horizontal advection of moisture by the different circulation regimes.
ISSN: 1558-8424

hal-00273624
https://hal.archives-ouvertes.fr/hal-00273624
https://hal.archives-ouvertes.fr/hal-00273624/document
https://hal.archives-ouvertes.fr/hal-00273624/file/drJAM_cycle_diurne_GPS_rev1.pdf
DOI : 10.1175/JAM2450.1

Éditeur(s) : Gauthier-Villars
Résumé : This review provides a brief update of the occurrence and adaptive significance of asexual reproduction in echinoderms. It then focuses on the state of knowledge of biotic and abiotic factors that influence asexual processes in this group, particularly factors that may play a role in regulating the expression and relative proportion of asexual versus sexual phenotypes within populations of species, as well as factors modulating and triggering asexual processes. The information presented in the review is synthesized into the form of a basic model depicting how environmental factors may interact with physiological factors to regulate asexual reproduction in echinoderms, and to show how such regulatory processes may parallel in some ways those known to regulate sexual reproduction. Since the model is based mainly on correlational evidence derived from comparative field observations, a number of experimental approaches for testing the predictions of the model are discussed briefly.
Oceanologica Acta (0399-1784) (Gauthier-Villars), 1996 , Vol. 19 , N. 3-4 , P. 227-235

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/00094/20481/18151.pdf
http://archimer.ifremer.fr/doc/00094/20481/

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Orogenic wedges locally present chaotic tectonostratigraphic units that contain exotic blocks of various size, origin, age and lithology, embedded in a sedimentary matrix. The occurrence of ophiolitic blocks, sometimes huge, in such “mélanges” raises questions on (i) the mechanisms responsible for the incorporation of oceanic basement rocks into an accretionary wedge and (ii) the mechanisms allowing exhumation and redeposition of these exotic elements in “mélanges” during wedge growth.To address these questions, we present the results of a series of analogue experiments performed to characterize the processes and parameters responsible for accretion, exhumation and tectonosedimentary reworking of oceanic basement lithospheric fragments in an accretionary wedge.The experimental setup is designed to simulate the interaction between tectonics, erosion and sedimentation. Different configurations are applied to study the impact of various parameters, such as irregular oceanic floor due to structural inheritance, or the presence of layers with contrasted rheology that can affect deformation partitioning in the wedge (frontal accretion vs basal accretion) influencing its growth. Image correlation technique allows extracting instantaneous velocity field, and tracking of passive particles. By retrieving the particle paths determined from models, the pressure-temperature path of mélange units or elementary blocks can be discussed. The experimental results are then compared with observations from ophiolite-bearing mélanges in Taiwan (Lichi and Kenting mélanges) and Raman spectroscopy of carbonaceous material (RSCM) Thermometry data on rocks from the northern Apennines (Casanova mélange). A geological scenario is proposed following basic observations. The tectonic evolution of the retroside of doubly vergent accretionary wedges is mainly controlled by backthrusting and backfolding. The retro wedge is characterized by steep slopes that are prone to gravitational instabilities. It triggers submarine landslides inducing huge mass transfers. This erosion combined with backthrusting could favour exhumation of the ophiolitic fragments formerly accreted at the base of the wedge along the rough seafloor-sediments interface. Such an exhumed material can be reworked and deposited as debris- flows in proximal basins located at the foot of the retrowedge slope forming a tectono-sedimentary mélange. These syntectonic basins are continuously deformed and involved in prograding backthrusting-induced deformation.
ISSN: 0264-3707

hal-01395127
https://hal.archives-ouvertes.fr/hal-01395127
DOI : 10.1016/j.jog.2016.05.008

Éditeur(s) : HAL CCSD Elsevier
Résumé : The slow advance of a crack in soda-silicate glasses was studied at nanometer scale by in-situ and real-time atomic force microscopy (AFM) in a well-controlled atmosphere. An enhanced diffusion of sodium ions in the stress-gradient field at the sub-micrometric vicinity of the crack tip was revealed through several effects: growth of nodules in AFM height images, changes in the AFM tip–sample energy dissipation. The nodules patterns revealed a dewetting phenomenon evidenced by ‘breath figures'. Complementary chemical micro-analyses were done. These experimental results were explained by a two-step process: (i) a fast migration (typical time: few milliseconds) of sodium ions towards the fracture surfaces as proposed by Langford et al. [J. Mat. Res. 6 (1991) 1358], (ii) a slow backwards diffusion of the cations as evidenced in these AFM experiments (typical time: few minutes). Measurements of the diffusion coefficient of that relaxing process were done at room temperature. Our results strengthen the theoretical concept of a near-surface structural relaxation due to the stress-gradient at the vicinity of the crack tip. The inhomogeneous migration of sodium ions might be a direct experimental evidence of the presence of sodium-rich channels in the silicate structure [A. Meyer et al., Phys. Rev. Let. 93 (2004) 027801].
ISSN: 0022-3093

hal-00407634
https://hal.archives-ouvertes.fr/hal-00407634
DOI : 10.1016/j.jnoncrysol.2006.09.034

Éditeur(s) : HAL CCSD
Résumé : International audience
The published literature related to distributed parameter systems theory is quite large, and it is not feasible in a single book to give a detailed review on the wide historical development of all of it. Our choice of what to cover was motivated by the following consideration. Since distributed parameter systems evolve in time and space, the research investigations on their analysis and control focus on considering the whole system domain for any study. We feel strongly that within this research field, animportant consideration was missing; that of considering that the system may give raise to prescribed subdomains (regions) where one has to achieve an objective. This is the case of so many applications ranging from engineering to life sciences. For that reason, covering classical prerequisite in analysis and control areas, we have devoted the book to the extension of the classical distributed parameter results to regional ones.Students of mathematics do not come into contacts with distributed parameter systems during their classes. They are introduced to them when they start research and often they are influenced by the knowledge and the advice of experimented scientists. This was our case at the very beginning of these research investigations in the mid 70’s. We would liketo express our special thanks to many of them and mainly late Professor Anthony J. Pritchard (University of Warwick, GB) and late Professor J.L. Lions (College de France) who were so encouraging in front of our determination in driving an academic carrier. We also express our thanks to our co-workers and research students. We wish to acknowledge the feedback from all those who took courses based on various parts of this book.This book may be used by graduate students in mathematics, engineering, physics, and even by students from other fields such as life or environmental sciences. This book may also be used as an information source for researchers and education professionals. We assume that the readers already know the basic concepts of analysis and control of distributedparameter systems.
https://hal.archives-ouvertes.fr/hal-01297188

ISBN : 978-2-35412-140-2
hal-01297188
https://hal.archives-ouvertes.fr/hal-01297188

Éditeur(s) : Edp Sciences S A
Résumé : Reared sea bass were submitted to six stressful situations: hyperoxia with or without hypercapnia, increased stocking density in an open flow or recirculating system, transfer to another tank and nodavirus injection. The potentially negative impact of these factors on the lives of sea bass was investigated by measuring 9 water parameters and 19 fish parameters including total serum protein (TSP). TSP has already been used to evaluate stress. The present study investigates data of previous and new experiments, concentrating on the potential use of TSP as a routine indicator to assess welfare in sea bass reared on fish farms. In the current experiment, oxygen and carbon dioxide were seen to affect levels of TSP, but alterations were too erratic to enable proper comparison, probably because they are normal components of the fish environment and become toxic only by dose increase. TSP decreased when stocking density increased. After transfer to another tank, TSP decreased to 14% for three weeks and then increased during the fourth week through compensative overproduction, before returning to normal levels after 2 months. The results confirmed that transfer is an important stress factor for fish, with cumulative effects for successive transfers. TSP alteration of nodavirus-injected fish depends on the type of symptoms, which can be divided into 3 groups: (i) dying fish, in which TSP increased sharply due to over-production of protein involved in non-specific defences and inflammation, then decreased dramatically before death; (ii) whirling fish, a group that included both fish that later died, in which TSP decreased, and fish that subsequently survived, in which TSP increased due to development of specific immunity; and (iii) asymptomatic fish, in which TPS was similar to control levels and which were probably insensitive to nodavirus and/or had developed defences. In this paper, different mechanisms of TSP alteration are proposed and the interest of TSP as a field parameter is discussed. TSP is a non-destructive parameter that is robust, easy to measure everywhere and cheap, representing a suitable way of monitoring the overall welfare of fish by its regular increase. It can be used only as a "warning" of poor rearing conditions, however, and further investigations would be needed to identify the specific stress or health disorder.
Aquatic Living Resources (0990-7440) (Edp Sciences S A), 2011-04 , Vol. 24 , N. 2 , P. 121-127

Droits : EDP Sciences, IFREMER, IRD 2011
http://archimer.ifremer.fr/doc/00043/15382/12740.pdf
DOI:10.1051/alr/2011130
http://archimer.ifremer.fr/doc/00043/15382/

Éditeur(s) : HAL CCSD Public Library of Science
Résumé : International audience
Mutualisms, or interactions between species that lead to net fitness benefits for each species involved, are stable and ubiquitous in nature mostly due to "byproduct benefits" stemming from the intrinsic traits of one partner that generate an indirect and positive outcome for the other. Here we verify if myrmecotrophy (where plants obtain nutrients from the refuse of their associated ants) can explain the stability of the tripartite association between the myrmecophyte Hirtella physophora, the ant Allomerus decemarticulatus and an Ascomycota fungus. The plant shelters and provides the ants with extrafloral nectar. The ants protect the plant from herbivores and integrate the fungus into the construction of a trap that they use to capture prey; they also provide the fungus and their host plant with nutrients. During a 9-month field study, we over-provisioned experimental ant colonies with insects, enhancing colony fitness (i.e., more winged females were produced). The rate of partial castration of the host plant, previously demonstrated, was not influenced by the experiment. Experimental plants showed higher δ¹⁵N values (confirming myrmecotrophy), plus enhanced vegetative growth (e.g., more leaves produced increased the possibility of lodging ants in leaf pouches) and fitness (i.e., more fruits produced and more flowers that matured into fruit). This study highlights the importance of myrmecotrophy on host plant fitness and the stability of ant-myrmecophyte mutualisms.
PLoS ONE

hal-00913754
https://hal.archives-ouvertes.fr/hal-00913754
https://hal.archives-ouvertes.fr/hal-00913754/document
DOI : 10.1371/journal.pone.0059405
OATAO : 10202