Éditeur(s) : Elsevier
Résumé : Correlation between DNA microsatellite heterozygosity and growth rate was investigated in two hatchery-propagated stocks of the shrimp Penaeus stylirostris, which had been genetically isolated from wild founders for 17 generations, and from each other for five more generations. presumed demographic history of these populations suggested that they were maintained at small effective population sizes. and this was confirmed by significant changes in allelic frequencies between the two stocks. Despite a small sample size (n = 60) and a small number of loci screened, a significant positive correlation was detected between microsatellite tri-locus heterozygosity and growth rate in one of the two stocks (r = 0.3, P = 0.02). In the other stock (n = 48), the positive correlation was not significant, but the combined test of single locus heterozygote advantage over the three loci was significant (P = 0.005).Use of DNA microsatellite markers, whose selectively neutral status is generally accepted, allowed us to reject the hypothesis of direct overdominance at marker loci as an explanation for an association of growth rate with heterozygosity. The average depression associated with one locus in our case is above or equivalent to the amount observed for a 10% increase of inbreeding in other species. These results suggest that heterozygosity at neutral marker loci is sufficiently well correlated with individual inbreeding coefficients to reveal a significant residual inbreeding load for growth rate in Tahitian P. stylirostris stocks. Inbreeding during hatchery propagation was, thus, insufficient to purge the ancestral load.
Aquaculture (0044-8486) (Elsevier), 2000-04 , Vol. 184 , N. 3-4 , P. 203-219

Droits : 2000 Elsevier Science B.V. All rights reserved
http://archimer.ifremer.fr/doc/2000/publication-753.pdf
DOI:10.1016/S0044-8486(99)00331-2
http://archimer.ifremer.fr/doc/00000/753/

Éditeur(s) : HAL CCSD American Geophysical Union
Résumé : International audience
The reactivation of faults with near-optimal orientations is commonly considered to control the state of stress in the crust. Near the surface, where a principal stress direction is vertical, the attitude of such faults is explained by Anderson's theory. This raises the questions of how prevalent this type of faulting actually is in current seismicity, down to what depth it frequently occurs, and what range of friction angles explains it best. The Global Centroid Moment Tensor catalog is analyzed to address these questions. Dip-slip and strike-slip mechanisms are dominant, and oblique slips are relatively rare for well-constrained events with depths shallower than 30 km. Preferred Andersonian faulting is the simplest, but not the unique, explanation for this dominance. Isolating reverse, strike- slip, and normal events reveals an asymmetry in the distribution of nodal plane dips and plunges of the P, B, and T axes between reverse and normal faulting. Assuming that the most frequent events correspond to reactivation near optimal orientations yields 40-60 degrees and 0-20 degrees friction angles for reverse and normal faults, respectively. This indicates that reverse and normal faulting mechanics are not symmetrical with respect to stress configuration as predicted by Anderson's theory.
ISSN: 8755-1209

hal-00412159
https://hal.archives-ouvertes.fr/hal-00412159
DOI : 10.1029/2007RG000240

Éditeur(s) : HAL CCSD
Résumé : This work focus on the characterization of the source and dynamic of compactional fluids during sedimentary burial, through two complementary examples of late orogenic oil‐field half‐grabens: The exhumed Lodève Permian Basin and a deep buried Jurassic basin in the North Viking Graben (North Sea).Constituting the main part of the thesis, a multi‐disciplinary approach was conducted in the Lodève Basin where Ba‐F‐Cu‐Pb polymetallic mineralized systems are trapped into synrift faults and paleokarsts in the carbonate basement at the hinge point of the rollover. The source, timing and P/T conditions of fluid migration were deduced from the analysis of the microfabric, the fluid inclusions microthermometry, and the isotopic (Sr, S, O, H) and Rare Earth Element (REE) signature. Results are then crossed with a structural and thermal modeling that consolidates the sequence and dynamics of fluid during burial.A similar approach was conducted in the North Viking Graben where fluid markers are restricted to 3D seismic and well core data. Comparable Ba‐Pb‐Zn veins are reported in basin margin, plugging one of the most important siliciclastic hydrocarbon reservoir in the substratum. This analysis provides additional constraints on basinal fluid behavior and allows us to propose a global dynamic model for various compositions of fluids and reservoirs.We conclude to a polyphase fluid sequence history including:(a) In the carbonate basement of the Lodève Basin, karstic paleocanyon incisions and associated cavities coupled to synrift fault, act as major drain for fluids. These structures are early affected by hypogen‐sulfuric karstification in response to the interaction between bacterial oxidation of sulfides entrapped within Lower Permian blackshales and the basement oxidizing aquifer.(b) Disequilibrium compaction initiates overpressure‐driven basinal fluid migration towards basin margins, characterized by temperatures around 150‐180°C and salinities between 9 et 18wt%eq.NaCl. Isotopic (Sr, S, O) and REE analyses reveal that Ba‐M+‐rich mineralizing fluids derived mainly from buried blackshales diagenesis. External fluids coming from the lower crust are also identified that play a key role in fluorite precipitation by the leaching of late hercynian granites (mean temperature of 250°C and salinity > 20wt%eq.NaCl).(c) During the synrift period, fluid overpressure is responsible for the periodic reactivation of fault plane according to seismic‐valve process, bedded‐control shearing and hydraulic brecciation at the basement‐seal interface. These mechanisms induce cyclic polymetallic mineralization by the mixing between in‐situ formation water and deep ascending basinal fluids.(d) Thermogenic fluids expulsion starts with last basinal fluids during late burial stage. Hydrocarbons thus migrate along the same regional pathways up to the rollover crest, where they are partly rerouted by the previous mineralized baffle.(e) In the Lodève basin, post‐rift exhumation of the margins led to the remobilization of synrift deposits by subaerial biochemical processes at the sulfate‐methane transition. The latter results from the interaction between the still active hydrocarbon dysmigration with a playa lake sulfate‐rich aquifer. Secondary low‐temperature barite fronts precipitate then within basement meteoric karsts.In addition to the « source to sink » model of basinal fluids, this work provides new insights on the early plugging of hydrocarbon reservoirs and for the metallogenesis of Mississippi Valley‐Type deposits.
Ce travail porte sur la caractérisation de la source et de la dynamique des fluides de bassin au cours de leur chargement à travers deux exemples complémentaires de demi‐grabens tardi‐orogéniques pétroliers : Le Bassin Permien de Lodève, aujourd’hui à l’affleurement et un bassin jurassique enfouis dans le North Viking Graben (Mer du Nord).Le coeur de la thèse concerne le Bassin de Lodève où, à partir d’une approche pluridisciplinaire intégrée, nous avons caractérisé l’architecture des minéralisations (Ba, F, Cu, Pb) piégées dans un réseau paléokarstique alimenté par les failles syn‐rift, dans le substratum carbonaté à l’apex du roll‐over. La source, le calendrier et les conditions de migration des fluides ont été approchés à partir de l’analyse de la micro‐fabrique, la microthermométrie sur inclusions fluides, les analyses isotopiques (Sr, S, O, H) et de Terres Rares. Les résultats analytiques ont été enfin croisés avec un modèle thermique et structural du bassin qui conforte la séquence et la dynamique du système fluide en cours d’enfouissement.Une démarche similaire, mais plus limitée, a été conduite dans le bassin du North Viking Graben où l’accès aux marqueurs fluides est restreint aux données de sismique 3D et de carottes. Comme à Lodève, les minéralisations Ba‐Pb‐Zn colmatent un réservoir dans le substratum à l’apex du roll‐over. Elles se présentent sous forme de ciments dans des grès ou des fractures. Cette analyse apporte des contraintes complémentaires et permet de proposer un modèle dynamique général avec des variantes en fonction de la nature des fluides et des réservoirs.On retiendra donc la séquence fluide suivante :(a) Dans le cas du bassin de Lodève sur substratum carbonaté, les chemins préférentiels de drainage se développent dans des paléocanyons N‐S couplés à un réseau de fractures et d’endokarsts météoriques. Ces derniers sont élargis en début de rifting par la dissolution hypogène sulfurique produite par l’oxydation bactérienne des sulfates et des pyrites des blackshales, au contact de l’aquifère oxydant du Cambrien.(b) Le déséquilibre de compaction initie la migration des fluides interstitiels en surpression vers les marges avec des températures autour de 150‐180°C et des salinités entre 9 et 18wt%eq.NaCl. Les analyses isotopiques (Sr, S, O) révèlent que la majorité des fluides provient de l’altération diagénétique des blackshales riches en métaux. Des interactions sont également mises en évidence avec des fluides profonds (entre 240°C et 260°C ; salinités > à 20wt%eq.NaCl), qui lessivent les granites tardi‐hercyniens.(c) Pendant le syn‐rift, les conditions de surpression de fluide permettent la réactivation cyclique des failles, les décollements stratigraphiques et la formation de brèches hydrauliques, favorisant la mise en connexion avec les réservoirs superficiels à l’apex du rollover. Le modèle de Sibson ajusté aux fluides de bassins est alors le moteur de la migration verticale.(d) Les fluides thermogéniques commencent à être expulsés avec les derniers fluides de compaction au cours d’un stade plus évolué de l’enfouissement en empruntant les mêmes chemins jusqu’à l’apex du roll over. Ils sont alors partiellement freinés et déviés par les colmatages minéralisés antérieurs.(e) A Lodève, la continentalisation des minéralisations antérieures au cours de l’exhumation post‐rift conduit à leur remaniement partiel au niveau de la transition sulfate‐méthane induite par l’interaction entre une playa évaporitique et la dysmigration des hydrocarbures. Des barytines secondaires de basse température, déprimées en Sr sont alors précipitées de manière synsédimentaire dans des karsts météoriques du socle.Outre l’illustration d’un modèle complet (source to sink) de dynamique des fluides dans un bassin, ce travail apporte de nouvelles contraintes dans l’approche du colmatage des réservoirs à hydrocarbures sur les têtes de blocs basculés et sur la genèse des gîtes miniers de type Mississippi Valley‐Type.
https://hal.archives-ouvertes.fr/tel-01457583

tel-01457583
https://hal.archives-ouvertes.fr/tel-01457583
https://hal.archives-ouvertes.fr/tel-01457583/document
https://hal.archives-ouvertes.fr/tel-01457583/file/th%C3%A8seLaurent2015V2.pdf

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
This paper examines the thermal properties of cement composites reinforced with vegetable bagasse fibres (1.5% and 3% wrtc). Thermal properties have been correlated to macroscopic density and porosity in order to estimate thermal conductivity of fibres using a calculation inspired from the Maxwell-Eucken modelling. Experimental investigations reveal that adding retified bagasse fibres reduces composites thermal conductivity and yields a weaker specific heat in comparison with composites made with alkaline bagasse fibres. Moreover, the more the fibres, the lighter the specimen; lower its thermal conductivity and lower its specific heat. Thermal conductivity of alkaline fibres is lower than retified fibres one.
ISSN: 1359-835X

hal-00809831
https://hal.univ-antilles.fr/hal-00809831
DOI : 10.1016/j.compositesa.2010.01.002

Éditeur(s) : HAL CCSD Elsevier Masson
Résumé : In Vietnam, the Triassic Indosinian collision affected coevally the Truong Son belt and the Kontum Massif,which were not independent tectonic units, but parts of the same Gondwana-derived Indochina continental block. This thermotectonic event took place synchronously throughout Vietnam, during the Lower Triassic 250-240-Ma time interval, as demonstrated by numerous geochronological data, combining Ar-Ar and U-Pb dating methods. Structural and kinematic investigations, in the Indosinian metamorphic rocks, reveal that the collisional process resulted from a consistent northwest-striking convergence of Indochina with respect to the adjacent blocks. It is suggested that this motion was taken up by a pair of opposite subduction zones: to the north, beneath South China, and to the west, beneath western Indochina, along the Song Ma and Po Ko sutures, respectively. Tectonic markers, calc-alkaline subduction-related volcanism and granitic intrusions and the generation of high-pressure rocks that have been recently discovered support this geodynamic setting, at least along Po Ko. Along the northwest-trending Song Ma zone, the obliquity of the convergence during subduction and subsequent collision resulted in the development, within the Truong Son Belt, of a set of subparallel dextral mylonitic shear zones, under amphibolite-facies metamorphism. The intermediate segments remained weakly metamorphic or even almost devoid of metamorphism. Along Po Ko, the convergence was near-orthogonal, with a left-lateral strike-slip component; the ongoing continental subduction resulted in the reworking of the Kontum granulitic basement and the development of Indosinian HP granulitic conditions; the subsequent extension-related exhumation operated approximately in the same northwestwards direction. This Indosinian evolution, applied on a continental crust that had been probably affected, as in South China, by a Caledonian-related event, as judged by the general unconformity of the Lower Devonian sediments, the widespread occurrence of magmatic crystallisation ages of ca 450 Ma (Ordovician-Silurian), and by the approximately similar age of the primary granulitic episode in the Kontum Massif. The similarities of the Devonian facies over central, northern Vietnam and South China imply a land connection, possibly as a consequence of a Caledonian collision along Song Ma, but this does not preclude a further oceanic opening and a closure during the Indosinian.
ISSN: 1631-0713

hal-00411591
https://hal.archives-ouvertes.fr/hal-00411591
DOI : 10.1016/j.crte.2007.10.005

Éditeur(s) : HAL CCSD American Geophysical Union (AGU)
Résumé : International audience
The objective of this study was to realize a three-dimensional (3-D) geological model of the deep basin structure of the Middle Durance region (of folds and faults) by integration of geological and geophysical data, and to evaluate its fault geometry and tectonic history. All of the available geophysical and geological data were compiled in three dimensions using the gOcad geomodeler. The geological and geophysical data were used to build a 3-D geological model of the Middle Durance region. The data on the 3-D geometry of fault surfaces and stratigraphic horizons and the thickness maps of the main stratigraphic units are supported by the 3-D geological model. We show that the Middle Durance Fault cannot be interpreted as a single fault plane that affected the entire Meso-Cenozoic sedimentary layers and the Paleozoic basement but as a listric segmented faulting system in sedimentary layers, rooted in Triassic evaporites and a normal block faulting system in the basement. This decoupling level in the Triassic layers reveals thin-skin deformation, formed by strong mechanical decoupling between the Mesozoic sedimentary cover and the Paleozoic basement. This study also confirms that the Provence geological structure has resulted mainly from Pyrenean deformation, which was partly reactivated by Alpine deformation. We demonstrate that the Middle Durance Fault Zone is a transfer fault that accommodates deformation of the sedimentary filling of the South-East Basin through modified fold geometry over a zone of 7 km to 8 km around the main segment of the fault zone.
ISSN: 0278-7407

hal-01172221
https://hal.archives-ouvertes.fr/hal-01172221
DOI : 10.1002/2014TC003749

Éditeur(s) : NRC
Résumé : In self-feeding conditions, a few individual sea bass (Dicentrarchus labrax (L., 1758)) display strong activity in striking the food dispenser, whereas the remaining individuals of the group actuate the feeder weakly or never. Here, we investigated the effects of removal of the individuals showing dominant activity on the social and feeding behaviours in groups of juvenile sea bass. Following removal, new fish showing a dominant self-feeding activity quickly appear. They always come from the group of fish that have a low number of triggering actuations. This observation shows that it takes less time, about 5 days after the removal of dominant triggerers vs. 14 days at the beginning, for the re-establishment of the behavioural structure, suggesting the possibility of social transmission between individuals. The fish that show weak triggering activity seem to reach the high-food triggering level without obvious signs of competition. This experiment reveals the importance of the food-demand behavioural structure: the fish displaying the highest activity lead to a general food distribution and play a dominant role in feeding the entire group. Functional plasticity in this role within individuals is also demonstrated, indicating that the high-triggering function is essential for the group and not for the individual themselves.
Au sein d'un groupe de bars (Dicentrarchus labrax (L., 1758)) placés en auto-nourrissage, quelques individus disposent d'une activité forte de déclenchement volontaire du distributeur d'aliments. Les autres poissons du groupe disposent d'une activité de demande faible voire nulle. Ici, nous avons étudié l'impact du retrait des poissons à forte activité sur le comportement alimentaire et social de groupes de bars juvéniles. De nouveaux individus à forte activité réapparaissent rapidement, provenant exclusivement de la classe de poissons de faible demande. Cinq jours en moyenne suffisent après le retrait, contre 14 jours au début de l'expérience, pour que la structure comportementale se rétablisse suggérant l'existence d'une transmission sociale entre les individus. Ces poissons de faible activité semblent de plus atteindre leur nouvelle fonction sans aucun signe de compétition. Cette expérience révèle d'abord l'importance de la structure de la demande alimentaire puisqu'elle réapparaît après le retrait. Elle montre également que l'activité des forts manipulateurs conduit à une distribution générale de l'aliment et contribue à nourrir le groupe en entier. L'étude montre enfin une plasticité fonctionnelle indiquant que seule la fonction de manipulateur fort est essentiel pour la stabilité du groupe, non l'identité des individus par elle-même.
Canadian journal of zoology (0008-4301) (NRC), 2008-09 , Vol. 86 , N. 9 , P. 1015-1023

Droits : 2008 NRC Canada
http://archimer.ifremer.fr/doc/2008/publication-4766.pdf
DOI:10.1139/Z08-077
http://archimer.ifremer.fr/doc/00000/4766/

Éditeur(s) : HAL CCSD
Résumé : International audience
The Imiter silver mine is a world-class deposit located in the Easternpart of the Anti-Atlas (Morocco). The deposit is hosted by Cryogenianblack shales and Ediacaran volcanics, and unconformablyoverlain byPaleozoic sedimentary rocks. The paragenetic sequence for the ganguemineral is composedby amacroscopically white quartz (Qz1) associatedwith the deposition of galena and scarce silver mineralsas matrixof hydraulic breccias, followed by a grey quartz (Qz2) associated withthe main silver deposition event and a first generation of scarcedolomite(Dol1). A third episode is characterized by massive pink dolomite precipitation(Dol2) with minor quartz (Qz3) and base metals. Finally, asurficial event affects the mineralisation and is responsible for a secondaryore enrichment.Microthermometry study coupled with Raman analyses reveals thatfluid inclusions are CaCl2-dominated. The general trend is a decreaseof temperature from Qz1 (250°C) to Dol1 (80°C) then Dol 2 (probablybelow 70°C) depositions. Fluid salinity increases from Qz1 (6.3 to 19.0wt % NaCleq) to Dol1 (27.2 % wt NaCleq), and decreases with the precipitationof Dol2 associated with quartz 3 (15 %wt NaCleq). The 18Oisotopic composition of fluids in equilibrium with quartz and dolomitesuggestsamagmatic,metamorphic and/or basinal origin for the fluid atthe origin of Qz1, and that meteoric / surficial basinal brinesmay be atthe origin of Dol2.The proposed model to explain the ore forming processes in Imiter is amixing of Ca-brines, probably providing chloride complexes, with a hotNaCl fluid of lower salinity, leading to the precipitation of silver.Theresults favour the important role of calcic brines, whose origin remainsmatter to debate in such a giant depositand for whom age of emplacementis strongly discussed.
24 ème Réunion des sciences de la Terre 2014
Pau, France

insu-01080858
https://hal-insu.archives-ouvertes.fr/insu-01080858

Éditeur(s) : HAL CCSD American Geophysical Union
Résumé : International audience
The 856 A.D. Qumis earthquake (M7.9) is the most destructive earthquake to have occurred in Iran, killing more than 200,000 people and destroying the cities of Damghan and the old Parthian capital of Shahr-i Qumis (Hecatompylos). This study combines evidence of historical seismicity with observations of the geomorphology and paleoseismology to provide the first detailed description of active faulting in the Damghan region of the east Alborz mountains, Iran. Regional left-lateral shear is accommodated on the Astaneh, Damghan, and North Damghan faults. Quaternary alluvial fans have been displaced along the Astaneh fault, with 15–20 m stream offsets recording the cumulative displacement over the last two to five earthquakes. A paleoseismology study from a single trench along a 5–10 km segment of the Astaneh fault reveals a rupture prior to 1300 A.D. and significantly later than 600 B.C. Despite the limitations of a single trench in documenting the spatial and temporal evolution of the fault over the late Quaternary, we are nevertheless able to bracket the last event to a time period consistent with the 856 A.D. earthquake. Two older earthquakes were also identified during the Holocene occurring between 600 B.C. and 4600 B.C. and between 4600 B.C. and 9600 B.C. The location of our trench within a bend on the Astaneh fault, which could act as a barrier to rupture propagation, means the three earthquakes recovered from our trench over the Holocene may represent a minimum. Further trenching will reveal how the Astaneh fault ruptures over repeated earthquakes and, consequently, the magnitude and extent of slip during the 856 A.D. earthquake.
ISSN: 0148-0227

hal-00551330
https://hal.archives-ouvertes.fr/hal-00551330
https://hal.archives-ouvertes.fr/hal-00551330v2/document
https://hal.archives-ouvertes.fr/hal-00551330/file/Hollingsworth2010.pdf
DOI : 10.1029/2009JB007185

Éditeur(s) : American Geophysical Union
Résumé : The Fairway Ridge is a buried continental structure that separates the Fairway Basin from the New Caledonia Basin. The proposed Cretaceous age of the Fairway Basin has remained highly hypothetical to date. Deep offshore petroleum exploration wells revealed well-dated Mesozoic carbonaceous sedimentary rocks in the Taranaki Basin at the southern end of the Aotea Basin. In this paper we use geophysical data to confirm the continuity of the 2000 km long Fairway-Aotea Basin connecting New Caledonia to New Zealand and prove its early Late Cretaceous age. Analysis of seismic reflection profiles together with newly compiled gravity and magnetic maps reveals Late Cretaceous NE–SW trending lineaments projecting northeastward from major Tasman Sea fracture zones and the Bellona Trough, which demonstrate that the opening of the Fairway-Aotea Basin predates the opening of the Tasman Sea. This result combined with observations of the Mesozoic regional geology suggests that the Lord Howe, Fairway, and Norfolk ridges are part of a remnant late Early Cretaceous continental arc, which was fragmented into three pieces by the late Early to early Late Cretaceous. This event might be contemporaneous with a plate motion change between the Gondwana and Pacific plates and/or the arrival of the Hikurangi plateau in the subduction zone around 105 Ma, which caused the cessation of subduction along this plate boundary. We interpret either of those two events as being possible trigger events for the post–Early Cretaceous fragmentation of the eastern Gondwana margin in a slab retreat process.
Geochemistry Geophysics Geosystems - G3 (1525-2027) (American Geophysical Union), 2009-12 , Vol. 10 , N. 12 , P. 1-24

Droits : 2009 American Geophysical Union
http://archimer.ifremer.fr/doc/2009/publication-7322.pdf
DOI:10.1029/2009GC002612
http://archimer.ifremer.fr/doc/00000/7322/

Éditeur(s) : Proceedings of 3rd East-West Fisheries conference; 24-26 Nov. 1998; Copenhagen, Denmark
Résumé : The demand for fish products, from freshwater and from the sea, is globally increasing ail over the world. This major trend can be explained by the development of mankind, not only in quantity (one billion people more in the last 15 years) but also because food consumption habits are changing: for southern countries, fish products consumption is first a diversification of protein sources. For northern countries, it is a new style of eating with diet, tasteful and original products coming from the attractive « new frontier » symbolised by the sea. Global/y speaking, the aquatic product consumption raised from 9 to 13 kg./unhab./year during the last 30 years. It is now clear that catches from ail fisheries cannot match this steady increase of the demand as data collected from al/ countries reveal the stagnation of the world production since the beginning of the nineties. The reasons are now well-known: over-capacity of fishing fleets, over-fishing of many stocks, poor management of harvested species which results in about 20 millions of tons of waste while the same amount is processed into fishmeal and oil, out of direct human consumption.

Droits : Ifremer
http://archimer.ifremer.fr/doc/00041/15181/12518.pdf
http://archimer.ifremer.fr/doc/00041/15181/

Éditeur(s) : HAL CCSD
Résumé : Enamel formation requires the involvement of secretory calcium-binding phosphoproteins. Three of them, amelogenin (AMEL), ameloblastin (AMBN) and enamelin (ENAM), have been extensively studied in mammals. More recently, a fourth protein belonging to the same family has been identified: amelotin (AMTN). AMTN has only been studied in rodents and its role during amelogenesis remains unclear.The aim of this thesis is to extend the knowledge on AMTN by studying its evolution in amniotes and its expression in the lizard Anolis carolinensis.AMTN sequences from many amniote species have been extracted from databases or obtained by PCR, and analyzed. Those analyses allowed us to reveal differences in the gene structure and to highlight residues that were conserved during mammalian or amniote evolution. These conserved amino acids are essential to the structure and/or function of the protein.The expression of AMTN and of AMEL, AMBN and ENAM has been studied by in situ hybridization on lizard jaw sections. Comparison of the expression pattern of these genes during amelogenesis in the lizard with that described in rodents points to similarities (AMEL, AMBN and ENAM) but also to important differences, especially in the spatio-temporal expression of AMTN. In order to better understand AMTN evolution in tetrapods, I studied its expression in an amphibian (Pleurodeles waltl) and a marsupial (Monodelphis domestica).Taken together, these results suggest a link between the evolution of AMTN gene structure (loss of exons and of functional domains in mammals) and its expression (early in non-mammals versus late in mammals) with the emergence of prismatic structure of enamel in early mammals.
La formation de l'émail dentaire met en jeu des phosphoprotéines sécrétées liant le calcium. Parmi celles-ci figurent amélogénine (AMEL), améloblastine (AMBN) et énaméline (ENAM), qui ont fait l'objet de nombreuses études chez les mammifères. Plus récemment, une quatrième protéine de la même famille a été découverte, l'amélotine (AMTN). Elle n'a été étudiée que chez les rongeurs et son rôle au cours de l'amélogenèse reste mal défini. L'objectif de cette thèse est d'élargir les connaissances sur AMTN en étudiant son évolution chez les amniotes et son expression au cours de l'amélogenèse chez le lézard Anolis carolinensis. Les séquences d'AMTN d'un grand nombre d'amniotes ont été extraites des bases de données ou obtenues par PCR, et analysées. Ces analyses ont mis en évidence différentes structures géniques et des acides aminés très conservés au cours de l'évolution. Cette conservation indique qu'ils sont essentiels à la structure ou à la fonction de la protéine. L'expression d'AMTN ainsi que celle d'AMEL, AMBN et ENAM ont été étudiées par hybridation in situ sur des coupes de mâchoires de lézard. La comparaison des patrons d'expression chez le lézard avec ceux décrits chez la souris a révélé des différences dans l'expression spatio-temporelle d'AMTN. De ce fait, afin de mieux comprendre l'évolution de ce gène, son expression a été étudiée chez un amphibien (Pleurodeles waltl) et un marsupial (Monodelphis domestica).Ces travaux suggère un lien entre l'évolution de la structure génique d'AMTN (perte d'exons et de domaines fonctionnels) et de son expression (précoce versus tardive) avec l'émergence de la structure prismatique de l'émail chez les mammifères.
https://tel.archives-ouvertes.fr/tel-01154518

NNT : 2015PA066066
tel-01154518
https://tel.archives-ouvertes.fr/tel-01154518
https://tel.archives-ouvertes.fr/tel-01154518/document
https://tel.archives-ouvertes.fr/tel-01154518/file/2015PA066066.pdf

Éditeur(s) : HAL CCSD Nature Publishing Group
Résumé : International audience
The shallow water bivalve Codakia orbicularis lives in symbiotic association with a sulfur-oxidizing bacterium in its gills. The endosymbiont fixes CO2 and thus generates organic carbon compounds, which support the host's growth. To investigate the uncultured symbiont's metabolism and symbiont-host interactions in detail we conducted a proteogenomic analysis of purified bacteria. Unexpectedly, our results reveal a hitherto completely unrecognized feature of the C. orbicularis symbiont's physiology: the symbiont's genome encodes all proteins necessary for biological nitrogen fixation (diazotrophy). Expression of the respective genes under standard ambient conditions was confirmed by proteomics. Nitrogenase activity in the symbiont was also verified by enzyme activity assays. Phylogenetic analysis of the bacterial nitrogenase reductase NifH revealed the symbiont's close relationship to free-living nitrogen-fixing Proteobacteria from the seagrass sediment. The C. orbicularis symbiont, here tentatively named `Candidatus Thiodiazotropha endolucinida', may thus not only sustain the bivalve's carbon demands. C. orbicularis may also benefit from a steady supply of fixed nitrogen from its symbiont-a scenario that is unprecedented in comparable chemoautotrophic symbioses.
ISSN: 2058-5276

hal-01545904
https://hal.archives-ouvertes.fr/hal-01545904
DOI : 10.1038/nmicrobiol.2016.193

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Recent global kinematic studies reveal that most of the trenches roll back but a significant number of them advance toward the upper plate. Those advancing trenches are mostly located in the Western Pacific and correspond to the subduction of very old, Mesozoic oceanic lithosphere. While retreating trenches are commonly explained by the slab pull action of the descending lithosphere, the origin of advancing trenches is still debated. Since this relationship is dependent upon the adopted reference frame, we select region where geological studies show the variability of trench migration style with time. The Izu-Bonin-Mariana (IBM) region represents a key example. The detailed reconstruction of the trench migration of the IBM subducting system reveals that after a long episode of asymmetric rollback, the IBM trench recently started advancing. We propose that this change from retreating to advancing trench mode results from the subduction of progressively older and stiffer lithospheric material. We test this hypothesis by means of two-dimensional (2-D) numerical models, reproducing the effects of the lithospheric aging during subduction. The result of our numerical tests shows that the entrance of old and stiff lithosphere forces the trench to advance because the increasing stiffness of the slab prevents the slab to unbend once it has subducted. We adapt this physical result to the IBM evolution, showing that the switch from trench retreat to trench advance can reconcile the shape of IBM slab as previously suggested. Finally we discuss the possibility that the subduction of the Cretaceous lithosphere might have triggered the change of the motion of the Pacific plate around 5 Ma.
ISSN: 0012-821X

hal-00455988
https://hal.archives-ouvertes.fr/hal-00455988
DOI : 10.1016/j.epsl.2009.09.042

Éditeur(s) : HAL CCSD Portland Press
Résumé : International audience
Lutheran (Lu) blood group and Basal Cell Adhesion Molecule (BCAM) antigens both reside on two glycoprotein (gp) isoforms, Lu and Lu(v13), that differ by the size of their cytoplasmic tail. They are receptors of laminin-10/11 and are expressed in red blood cells (RBCs), epithelial cells of multiple tissues and vascular endothelial cells. To gain more insights into the biological function of Lu/BCAM gps, we looked for potential partners of their cytoplasmic tail. We isolated Ubc9 (Ubiquitin-conjugating enzyme 9) protein by screening a human kidney library using the yeast two-hybrid system. Lu/Ubc9 interaction was validated by GST pull-down and co-immunoprecipitation experiments. Endogenous Ubc9 formed a complex with endogenous or recombinant Lu gp in A498 and MDCK epithelial cells, respectively. Substitution of lysine 585 by alanine in the Lu gp, abolished in vitro and ex vivo interaction of Lu gp with Ubc9 protein. Lu K585A mutant transfected in MDCK cells exhibited a normal basolateral membrane expression but was overexpressed at the surface of polarized MDCK cells as compared to wild-type Lu. Pulse-chase experiments showed extended half-life of Lu K585A gp at the plasma membrane, suggesting an impaired endocytosis of this mutant leading to protein accumulation at the membrane. Furthermore, we showed that the ability of MDCK-Lu K585A cells to spread on immobilized laminin was dramatically decreased. Our data supports a physiological role for the direct interaction between Lu gp and Ubc9 protein, and reveals a role for this enzyme in regulating the stability of Lu gp at the cell membrane.
ISSN: 0264-6021

hal-00478614
https://hal.archives-ouvertes.fr/hal-00478614
https://hal.archives-ouvertes.fr/hal-00478614/document
https://hal.archives-ouvertes.fr/hal-00478614/file/PEER_stage2_10.1042%252FBJ20060861.pdf
DOI : 10.1042/BJ20060861

Éditeur(s) : HAL CCSD Elsevier
Résumé : Le titre a été changé Ancien titre: Roles for local crowding and pressure in counteracting density fluctuations at equilibrium
International audience
What is the probability that all the gas in a box accumulates in the same half of this box? Though amusing, this question underlies the fundamental problem of density fluctuations at equilibrium, which has profound implementations in many physical fields. The currently accepted solutions are derived from the studies of Brownian motion by Smoluchowski, but they are not appropriate for the directly colliding particles of gases. Two alternative theories are proposed here using self-regulatory Bernoulli distributions. A discretization of space is first introduced to develop a mechanism of matter congestion holding for high densities. In a second mechanism valid in ordinary conditions, the influence of local pressure on the location of every particle is examined using classical laws of ideal gases. This approach reveals that a negative feedback results from the reciprocal influences between individual particles and the population of particles, which strongly reduces the probability of atypical microstates. Finally, a thermodynamic quantum of time is defined to compare the recurrence times of improbable macrostates predicted through these different approaches.
Physica A: Statistical Mechanics and its Applications

hal-00920985
https://hal-univ-rennes1.archives-ouvertes.fr/hal-00920985
https://hal-univ-rennes1.archives-ouvertes.fr/hal-00920985v2/document
ARXIV : 1404.6223
DOI : 10.1016/j.physa.2014.03.067

Éditeur(s) : Université des Antilles Études caribéennes
Résumé : La compétitivité touristique est un concept dont l’importance est aujourd’hui largement reconnue. La plupart des travaux consacrés à ce thème l’ont abordé jusqu’ici sous différents aspects, mais sans qu’aucun modèle théorique n’ait réussi à notre connaissance à établir les liens empiriques qui existent entre tourisme et compétitivité. Cette étude tente de combler cette lacune, en proposant d’explorer, à l’aide de la technique de cointégration et du modèle à correction d’erreur, dans un contexte bivarié, la relation empirique qui existe entre tourisme et compétitivité, comme condition préalable à l’application du test de causalité de Granger. Cette procédure est adoptée et appliquée au cas des Antilles françaises (Guadeloupe et Martinique) sur la période 1990-2010. Les résultats révèlent l’existence d’une relation de cointégration entre compétitivité et activité touristique. Cependant, les tests de causalité de Granger, basés sur un modèle à correction d’erreurs indiquent qu’il n’existe pas de causalité ou d’impact unidirectionnel ou bidirectionnel entre variation de la recette touristique/PIB (proxy du développement touristique) et variation du PIB réel par habitant (proxy de la compétitivité). Par conséquent, l’hypothèse de la croissance tirée par le tourisme ne peut être inférée pour la Guadeloupe et la Martinique. Il s’agit d’enseignements majeurs dont devraient tenir compte les autorités responsables de cette activité.
The tourism competitiveness is an important concept today. The most studies investigate this theme from different ways. However, there are few studies about empirical link between tourism and competitiveness. This paper, thus attempts to examine the empirical relationship between these two variables. It uses the cointegration and error correction model (ECM) in a bivariate context as a precondition to apply Granger causality tests. This procedure was carried out in the case of French West Indies’s tourism industry during 1990-2010. The results show that there is a long-term relationship between tourism and competitiveness. In addition, Granger causality tests reveal no one-directional or bi-directional impact in the case of tourism receipts and GDP. Therefore, tourism-led growth hypothesis (TLG) cannot be inferred for French West Indies’s economy as a major concern of destination managers.
Guadeloupe
Martinique

Droits : info:eu-repo/semantics/openAccess
urn:doi:10.4000/etudescaribeennes.6316
http://journals.openedition.org/etudescaribeennes/6316

Éditeur(s) : Amer Geophysical Union
Résumé : Since Last Glacial Maximum (23-19 ka), Earth climate warming and deglaciation occurred in two major steps (Bolling-Allerod and Preboreal), interrupted by a short cooling interval referred to as the Younger Dryas (12.5-11.5 ka B. P.). In this study, three cores (MV-33, MV-66, and MD-40) collected in the central part of Pandora Trough (Gulf of Papua) have been analyzed, and they reveal a detailed sedimentary pattern at millennial timescale. Siliciclastic turbidites disappeared during the Bolling-Allerod and Preboreal intervals to systematically reoccur during the Younger Dryas interval. Subsequent to the final disappearance of the siliciclastic turbidites a calciturbidite occurred during meltwater pulse 1B. The Holocene interval was characterized by a lack of siliciclastic turbidites, relatively high carbonate content, and fine bank-derived aragonitic sediment. The observed millennial timescale sedimentary variability can be explained by sea level fluctuations. During the Last Glacial Maximum, siliciclastic turbidites were numerous when the lowstand coastal system was located along the modern shelf edge. Although they did not occur during the intervals of maximum flooding of the shelf (during meltwater pulses 1A and 1B), siliciclastic turbidites reappear briefly during the Younger Dryas, an interval when sea level rise slowed, stopped, or perhaps even fell. The timing of the calciturbidite coincides with the first reflooding of Eastern Fields Reef, an atoll that remained exposed for most of the glacial stages.
Journal Of Geophysical Research-earth Surface (0148-0227) (Amer Geophysical Union), 2008-03-29 , Vol. 113 , N. F01S19 , P. 1-15

Droits : Copyright 2008 by the American Geophysical Union.
http://archimer.ifremer.fr/doc/00079/19014/16592.pdf
DOI:10.1029/2006JF000649
http://archimer.ifremer.fr/doc/00079/19014/

Éditeur(s) : HAL CCSD
Résumé : The literature has identified a set of factors explaining the accumulation of capital. However, little attention has been paid to the impact of cultural beliefs. This paper, based on economic science, uses data collected from 207 haitian formal sector firms to develop and test a model of capital accumulation integrating socio-cultural traits, including life in the present moment, fatalism, primacy of the hereafter and mutual assistance. The results reveal that the primacy of the beyond, life in the present moment and mutual aid have negative and significant impacts on accumulation of capital. And, fatalism has positive and significant effects on this variable.
La littérature a identifié un ensemble de facteurs expliquant l'accumulation du capital. Cependant, les travaux ne se sont que très peu intéressés à l'impact des croyances culturelles. Ce papier, relevant de la science économique, utilise des données collectées auprès de 207 entreprises du secteur formel haïtien pour élaborer et tester un modèle d'accumulation du capital intégrant des traits socioculturels, notamment la vie dans l'instant présent, le fatalisme, la primauté de l'au-delà et l'entraide mutuelle. Les résultats révèlent que la primauté de l'au-delà, la vie dans l'instant présent et l'entraide mutuelle ont des impacts négatifs et significatifs sur l'accumulation du capital. En revanche, le fatalisme a des effets positifs et significatifs sur cette variable. Mots clés. Accumulation du capital, croyances, traits socioculturels.
https://hal.univ-antilles.fr/hal-01555285

Droits : info:eu-repo/semantics/OpenAccess
hal-01555285
https://hal.univ-antilles.fr/hal-01555285
https://hal.univ-antilles.fr/hal-01555285/document
https://hal.univ-antilles.fr/hal-01555285/file/Eliccel%20PAUL_%20Croyances%20et%20accumulation%20du%20capital_EP_28_06_17.pdf

Éditeur(s) : HAL CCSD Elsevier Masson
Résumé : International audience
Late Jurassic coral reefs are present in the Western High Atlas of Morocco along the eastern paleomargin of the young Atlantic Ocean. The Izwarn section shows two reef units made of scleractinian corals and microbialites, included in a progradational shallowing-upward succession. Changes in reefal composition and structure observed in a ca. 50 cm-thick interval at the base of the reef unit 1 are interpreted to represent the first well-documented ecological succession in Late Jurassic reefs. Bioclastic deposits, sparse and poorly diversified corals (five genera) preserved in life position, and finally a more diversified coral assemblage (11 genera) building a reef framework with stromatolitic crusts reflect pioneer, colonization and diversification stages, respectively. A specific depth window, where light was reduced but sufficient for a catch-up growth mode and below the erosive action of waves, probably at the lower slope of a fore-reef area, has made possible the development and the record of this ecological succession. With a more diversified coral assemblage (16 genera), the reef unit 2 reflects shallower and well-agitated waters of a fore-reef area. Overlaying this second reef unit, the upper part of the section reveals back-reef deposits made of reworked reef elements, whereas a putative reef crest area is not recorded.
ISSN: 0016-6995

hal-00795549
https://hal.archives-ouvertes.fr/hal-00795549
DOI : 10.1016/j.geobios.2012.05.002