Éditeur(s) : Wiley-blackwell
Résumé : Managing fisheries resources to maintain healthy ecosystems is one of the main goals of the ecosystem approach to fisheries (EAF). While a number of international treaties call for the implementation of EAF, there are still gaps in the underlying methodology. One aspect that has received substantial scientific attention recently is fisheries-induced evolution (FIE). Increasing evidence indicates that intensive fishing has the potential to exert strong directional selection on life-history traits, behaviour, physiology, and morphology of exploited fish. Of particular concern is that reversing evolutionary responses to fishing can be much more difficult than reversing demographic or phenotypically plastic responses. Furthermore, like climate change, multiple agents cause FIE, with effects accumulating over time. Consequently, FIE may alter the utility derived from fish stocks, which in turn can modify the monetary value living aquatic resources provide to society. Quantifying and predicting the evolutionary effects of fishing is therefore important for both ecological and economic reasons. An important reason this is not happening is the lack of an appropriate assessment framework. We therefore describe the evolutionary impact assessment (EvoIA) as a structured approach for assessing the evolutionary consequences of fishing and evaluating the predicted evolutionary outcomes of alternative management options. EvoIA can contribute to EAF by clarifying how evolution may alter stock properties and ecological relations, support the precautionary approach to fisheries management by addressing a previously overlooked source of uncertainty and risk, and thus contribute to sustainable fisheries.
Fish And Fisheries (1467-2960) (Wiley-blackwell), 2014-03 , Vol. 15 , N. 1 , P. 65-96

Droits : 2012 John Wiley & Sons Ltd
http://archimer.ifremer.fr/doc/00124/23522/21409.pdf
DOI:10.1111/faf.12007
http://archimer.ifremer.fr/doc/00124/23522/

Éditeur(s) : HAL CCSD
Résumé : International audience
Chronic obstructive pulmonary disease (COPD) is the chronic respiratory disease with the most important burden on public health in terms of morbidity, mortality and health costs. For patients, COPD is a major source of disability because of dyspnea, restriction in daily activities, exacerbation, risk of chronic respiratory failure and extra-respiratory systemic organ disorders. The previous French Language Respiratory Society (SPLF) guidelines on COPD exacerbations were published in 2003. Using the GRADE methodology, the present document reviews the current knowledge on COPD exacerbation through 4 specific outlines: (1) epidemiology, (2) clinical evaluation, (3) therapeutic management and (4) prevention. Specific aspects of outpatients and inpatients care are discussed, especially regarding assessment of exacerbation severity and pharmacological approach.
Revue Des Maladies Respiratoires

hal-01560287
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01560287
DOI : 10.1016/j.rmr.2017.03.034
PUBMED : 28552256

Éditeur(s) : HAL CCSD Springer-Verlag
Résumé : International audience
High-resolution borehole strainmeters are usually installed in tectonically active regions in order to detect slow-slip events, and to estimate slow transients related to earthquake swarms. However, they are also sensitive to other numerous influences, internal or external. Furthermore, the quality of their coupling to the rock through cementation, and the mechanical properties of the rock mass around them, have a critical influence on their records. Many of the existing strainmeters present such problems, and the correction for these effects often remains a challenge. In this paper, we present the analysis of the records of a high-resolution borehole dilatometer (Sacks–Evertson), located in the seismically active rift of Corinth (Greece) (station TRZ in the Trizonia island). We show that the instrument suffers from an only partial-solid coupling, and that the nearby sea tides have a direct (through elastic response) and indirect (through pore-pressure diffusion) effect on the dilatation signal, which adds up to the solid tidal strain source. We propose a methodology that allows, in a first step, to better separate the internal (solid tide) from the external (air pressure, sea level) influences, by calculating a frequency-dependent transfer function outside the range of the tidal periods. We then extrapolate this function, in particular at the tidal periods. In a second step, the resulting variation with frequency of the coupling coefficients with sea level led us to estimate the proportion of instrument not solidly cemented to rock (thus in contact with water pore pressure), which is about 90 % of the total height. Despite the small proportion of solid coupling, the sensor resolution remains very good up to a few tens of hours of a time period, thanks to the confining effects of the rocks on the local pore pressure. These results allow us to correct for the external effects, and reduce the associated variance by 80–90 % (in the period range of minutes to days). The empirical correction of the sea level effect could be explained using a simple Boussinesq’s approximation and 1D pore-pressure diffusion model, which contributed to better constraint of some of the poro-elastic parameters in the vicinity of the instrument. After correction, the solid tidal signal at the 24-h period is almost anti-correlated with those of the theoretical solid tide. This surprising result is consistent with a similar anti-correlation observed for the longest period surface waves (200 s) comparing the TRZ dilatometer signals to the strain measured by a nearby borehole strainmeter (MOK, 15 km). This could be related to the presence of a shallow fault close to the instrument, which would creep in response to seismic wave-related stress.
ISSN: 0033-4533

hal-01122853
https://hal.archives-ouvertes.fr/hal-01122853
DOI : 10.1007/s00024-013-0742-2

Éditeur(s) : Université des Antilles Études caribéennes
Résumé : This chapter seeks to contribute to a greater understanding of tourism on small tropical islands and to tourism planning in this context by outlining aspects of the methodology used in the preparation of the Samoa Tourism Development Plan 2002-2006 and by discussing some of the issues that arose from this process. In particular, the chapter presents a ‘question-asking’ approach that involves wide-ranging stakeholder consultation to identify and then address key issues, namely: - How much tourism does Samoa want and at what rate should it be developed over the next five years? - What will the growth of tourism in Samoa over the period 2002-2006 depend on? - What forms of tourism should be developed and where? - What are the most appropriate processes of tourism development for Samoa? The strategies formulated in the plan are then outlined. The paper concludes that local participation, while invaluable, is by itself insufficient for the preparation of an effective tourism development plan.
En présentant la méthodologie utilisée dans la présentation du Plan d’Aménagement Touristique de Samoa 2002-2006, ce chapitre cherche à éclaircir certains aspects de l’aménagement touristique dans les petites îles tropicales, ainsi que ceux de la planification touristique en ces lieux. Plus spécifiquement, cette étude présente une approche basée sur la formulation de questions destinées aux diverses parties intéressées afin d’identifier et puis d’adresser les points-clés de l’aménagement touristique dans le pays. Quatre questions principales résultent de ce processus, à savoir : Combien de tourisme veut le pays et à quel rythme doit-il se développer pendant les cinq années à venir ? De quels facteurs dépend la croissance du tourisme pendant la période 2002-2006 ? Quelles formes de tourisme faut-il développer et à quels endroits ? Quels sont les processus d’aménagement touristique les plus appropriés pour Samoa? On présente ensuite les stratégies formulées dans le plan. Pour conclure, il semble que la participation locale, bien qu’inappréciable, soit insuffisante par elle-même pour préparer un plan d’aménagement touristique efficace.
Este capítulo presenta la metodología utilizada en la preparación del Plan de Desarrollo Turístico de Samoa 2002-2006 y traza sus líneas generales. De esta manera, el plan pone de manifiesto los puntos claves del desarrollo turístico en las pequeñas islas tropicales y los aspectos metodológicos de la planificación turística en ese contexto. En particular, el trabajo presenta un enfoque basado en la formulación de preguntas destinadas a distintos participes con el fin de identificar los puntos claves del desarrollo turístico del país y de formular algunas estrategias en función de ellos. Cuatro preguntas principales resultan de este proceso:- Cómo quiere Samoa dimensionar su turismo? A qué ritmo debe desarrollarse durante los cinco próximos años? - De qué dependerá el mencionado desarrollo durante el periodo 2002-2006? - Qué tipologías de turismo deben desarrollarse y dónde? - Cuáles son los procesos de desarrollo más apropiados para Samoa? Posteriormente presentamos las estrategias del plan. Concluimos que la participación local es imprescindible pero, sola, no permite la preparación de un plan de desarrollo turístico eficaz.
Samoa

Droits : info:eu-repo/semantics/openAccess
urn:doi:10.4000/etudescaribeennes.1393
http://journals.openedition.org/etudescaribeennes/1393

Éditeur(s) : Amer Meteorological Soc
Résumé : The Lagrangian Transport Experiment (LATEX) was developed to study the influence of coupled physical and biogeochemical dynamics at the meso- and submesoscales on the transfers of matter and heat between the coastal zone and the open ocean. One of the goals of the Latex10 field experiment, conducted during September 2010 in the Gulf of Lion (northwest Mediterranean), was to mark a dynamical mesoscale feature by releasing a passive tracer [sulfur hexafluoride (SF6)] together with an array of Lagrangian buoys. The goal was to release the tracer in an initial patch as homogeneous as possible in the horizontal, and to study its turbulent mixing and dispersion while minimizing the contribution due to advection. For that, it was necessary to continuously adjust the vessel route in order to remain as closely as possible in the Lagrangian reference frame moving with the investigated mesoscale structure. To accomplish this task, a methodology and software were developed, which are presented here. The software is equipped with a series of graphical and user-friendly accessories and the entire package for MATLAB can be freely downloaded ().
Journal Of Atmospheric And Oceanic Technology (0739-0572) (Amer Meteorological Soc), 2013-08 , Vol. 30 , N. 8 , P. 1940-1950

Droits : 2013 American Meteorological Society
http://archimer.ifremer.fr/doc/00155/26590/24719.pdf
DOI:10.1175/JTECH-D-12-00183.1
http://archimer.ifremer.fr/doc/00155/26590/

Éditeur(s) : HAL CCSD
Résumé : Annual report
We present here the results of CRS reprocessing of a 3D real dataset acquired in 2001 on the Tournemire site in France, which is an experimental site for the Institut de Radioprotection et de Sûreté Nucléaire (IRSN) to test geophysical imaging process in the context of geological nuclear waste storage. The main objective was to evaluate the ability of the methodology to recognize, in the carbonate cover of the experimental site clay layer, the prolongation of weak vertical-displacement faults seen in a tunnel within that clay layer. Previous seismic processing using the conventional common midpoint (CMP) approach did not provide satisfactory results in this cover, although the fault has beenrecognized in the carbonates underlying the clay layer. An original strategy was elaborated to define the best-possible parameters of the 3D Common-Reflection-Surface (CRS) stack. The procedure in- cluded refining the velocity search along a velocity guide, using a first CRS stack as the base of a subsequent curvature-parameter search, or a parameter smoothing before stacking. An optimal ap- proach was elaborated on a subset of the data, and furthermore applied to the whole dataset. The resulting image shows improved event continuity in the carbonate cover, which allowed for horizon picking after depth migration, as well as the estimation of post-stack geometrical attributes, such as coherency. The processing indicates a zone of degraded quality of reflection events lying in the N-S direction, above the known fault zone within the underlying formations. Such feature corresponds to an alteration zone at the earth surface. Further investigation at a higher resolution scale is planned to confirm whether this zone could be a spot of possible leakage
https://hal.archives-ouvertes.fr/hal-00857376

hal-00857376
https://hal.archives-ouvertes.fr/hal-00857376

Éditeur(s) : HAL CCSD
Résumé : International audience
The Corinth Rift is the most seismically active zone in Europe. The area is characterized by very localized NSextension at a rate of1.5cm/year, the occurrence of frequent and intensive microseismic crises and occasionalmoderate to large earthquakes like in 1995 (Mw=6.1).Since the year 2000, the Corinth Rift Laboratory (CRL, http://crlab.eu) consisting in a multidisciplinary naturalobservatory, aims at understanding the mechanics of faulting and earthquake nucleation in the Rift. Recent studieshave improved our view about fault geometry and mechanics within CRL, but there is still a critical need for a betterknowledge of the structure at depth both for the accuracy of earthquake locations and for mechanical interpretationof the seismicity.In this project, we aim to analyze the complete seismological database (13 years of recordings) of CRL by usingrecently developed methodologies of structural imaging, in order to determine at the same time and with highresolution, the local 3D structure and the earthquake locations.We perform an iterative joint determination of 3D velocity model and earthquake coordinates. In a first step, Pand S velocity models are determined using first arrival time tomography method proposed by Taillandier et al.(2009). It consists in the minimization of the cost function between observed and theoretical arrival times which isachieved by the steepest descent method (e.g. Tarantola 1987). This latter requires computing the gradient of thecost function by using the adjoint state method (Chavent 1974). In a second step, earthquakes are located in thenew velocity model with a non-linear inversion method based on a Bayesian formulation (Gesret et al. 2015). Step1 and 2 are repeated until the cost function no longer decreases.We present preliminary results consisting in: (1) the adjustement of a 1D velocity model that is used as initialmodel of the 3D tomography and (2) a first attempt of the joint determination of 3D velocity model and earthquakelocation.In addition to the tomographic imaging, we perform a preliminary receiver function analysis of teleseismic datarecorded by the broadband stations of the CRL network. The RF analysis should provide the interface depthsbeneath seismometers and increase the imaging resolution of the upper crustal structures provided by the 3Dtomography. In this first attempt, we adjust the 1D velocity model that produces a synthetic RF as similar aspossible to the observed RF for a subset of data. We compare the identified interfaces with structures imaged bythe tomography.
EGU general assembly 2016
Vienne, Austria

hal-01306224
https://hal-mines-paristech.archives-ouvertes.fr/hal-01306224

Éditeur(s) : HAL CCSD
Résumé : Point processes are often used as spatial or spatio-temporal distribution models of occurrences. In this PhD dissertation, we focus first on Cox processes driven by a hidden process associated with a Dirichlet process. This model corresponds to hidden occurrences influencing the stochastic intensity of observed occurrences. We generalize the notion of "Shot noise Cox process" introduced by M{o}ller and develop its bayesian analysis by a Gibbs sampler combined with a Metropolis-Hastings algorithm. We show that our MCMC method is a reversible jump one. The model takes into account a random number of hidden contributions producing effects on the observed point process intensity. Therefore the parameter space has a variable dimension. We focus the statistical inference on the estimation of the hidden contribution expected value, the hidden contribution expected number, the spatial influence and correlation parameters. The contribution equality test and contribution independence test are proposed. Applications in epidemiology and ecology are shown from extit{Rubus fruticosa} data, extit{Ibicella lutea} data and death number data in counties of Georgia, USA. Two situations are considered with respect to available data~: firstly, the spatial positions of occurrences are observed between several pairs of consecutive dates; secondly, counts are carried out over a fixed time interval in several spatial sampling units. Secondly, we focus on point processes with memory introduced by Kagan, Ogata and Vere-Jones, pioneers in statistical seismology. In fact, spatio-temporal point processes play an important role in the studies of earthquake catalogs since they consist of seismic events with their dates and spatial locations. We studied an ETAS (Epidemic Type Aftershock Sequence) model with time independent background intensity and several triggering functions taking into account previous events. We illustrate our approach with a seismicity study of the Lesser Antilles arc. A comparaison study of Gamma, Weibull, Log-Normal and modified Omori law triggering function models is also carried out. We show that the modified Omori law does not fit the Lesser Antilles seismic data and the best adjusted triggering function is the Weibull model. Consequently, the waiting time between aftershocks is weaker in the Lesser Antilles zone compared to the one in regions with seismicity described by the modified Omori law. In other words, aftershock aggregativity is higher in the Lesser Antilles region. The stochastic background intensity following a Dirichlet process centered on a spatial log-normal process is discussed.
Les processus ponctuels sont souvent utilisés comme modèles de répartitions spatiales ou spatio-temporelles d'occurrences. Dans cette thèse, nous nous intéressons tout d'abord à des processus de Cox dirigés par un processus caché associé à un processus de Dirichlet. Ce modèle correspond à des occurrences cachées influençant l'intensité stochastique des occurrences observées. Nous généralisons la notion de " Shot noise Cox process " introduite par Moller et développons le traitement bayésien par un échantillonneur de Gibbs combiné à un algorithme de Metropolis-Hastings. Nous montrons que cette méthode MCMC est à sauts réversibles. Le modèle prend en compte, en effet, un nombre aléatoire de contributions cachées influençant l'intensité du processus ponctuel observé donc a un espace paramétrique de dimension variable. Nous focalisons l'inférence statistique sur l'estimation de la valeur espérée de chaque contribution cachée, le nombre espéré de contributions cachées, le degré d'influence spatiale de ces contributions et leur degré de corrélation. Le test d'égalité des contributions et celui de leur indépendance sont ainsi développés. L'utilité en épidémiologie et en écologie est alors démontrée à partir de données de Rubus fruticosa, Ibicella lutea et de mortalité dans les cantons de Georgia, USA. En termes de données observées, deux situations sont considérées: premièrement, les positions spatiales des occurrences sont observées entre plusieurs paires de dates consécutives; deuxièmement, des comptages sont effectués, au cours d'une période fixée, dans des unités d'échantillonnage spatiales. D'autre part, nous nous intéressons aux processus ponctuels à mémoire introduits par Kagan, Ogata et Vere-Jones, précurseurs de la statistique sismologique. En effet, les processus ponctuels spatio-temporels ont une place importante dans l'étude des catalogues sismiques puisque ces derniers sont généralement constitués d'événements sismiques datés et géo-référencés. Nous avons étudié un modèle ETAS (Epidemic Type Aftershock Sequence) avec une intensité d'arrière-plan indépendante du temps et plusieurs fonctions déclenchantes permettant d'intégrer les événements antérieurs récents. Cette approche est utilisée pour étudier la sismicité de l'arc des Petites Antilles. Une étude comparative des modèles Gamma, Weibull, Log-Normal et loi d'Omori modifiée pour les fonctions déclenchantes est menée. Nous montrons que la loi d'Omori modifiée ne s'ajuste pas aux données sismiques des Petites Antilles et la fonction déclenchante la plus adaptée est le modèle de Weibull. Cela implique que le temps d'attente entre répliques dans la zone des Petites Antilles est plus faible que celui des régions à sismicité décrite par la loi d'Omori modifiée. Autrement dit, l'agrégation des répliques après un événement majeur est plus prononcée dans la zone des Petites Antilles. La possibilité d'inclure une intensité d'arrière-plan suivant un processus de Dirichlet centré sur un processus spatial log-gaussien est discutée.
https://tel.archives-ouvertes.fr/tel-00841146

Droits : info:eu-repo/semantics/OpenAccess
NNT : 2012AGUY0555
tel-00841146
https://tel.archives-ouvertes.fr/tel-00841146
https://tel.archives-ouvertes.fr/tel-00841146/document
https://tel.archives-ouvertes.fr/tel-00841146/file/these_VALMY.pdf

Éditeur(s) : HAL CCSD BioMed Central
Résumé : International audience
UNLABELLED: ABSTRACT: BACKGROUND: Malaria remains a major health problem in French Guiana, with a mean of 3800 cases each year. A previous study in Camopi, an Amerindian village on the Oyapock River, highlighted the major contribution of environmental features to the incidence of malaria attacks. We propose a method for the objective selection of the best multivariate peridomestic landscape characterisation that maximises the chances of identifying relationships between environmental features and malaria incidence, statistically significant and meaningful from an epidemiological point of view. METHODS: A land-cover map, the hydrological network and the geolocalised inhabited houses were used to characterise the peridomestic landscape in eleven discoid buffers with radii of 50, 100, 200, 300, 400, 500, 600, 700, 800, 900 and 1000 metres. Buffer-based landscape characterisations were first compared in terms of their capacity to discriminate between sites within the geographic space and of their effective multidimensionality in variable space. The Akaike information criterion (AIC) was then used to select the landscape model best explaining the incidences of P. vivax and P. falciparum malaria. Finally, we calculated Pearson correlation coefficients for the relationships between environmental variables and malaria incidence, by species, for the more relevant buffers. RESULTS: The optimal buffers for environmental characterisation had radii of 100 m around houses for P. vivax and 400 m around houses for P. falciparum. The incidence of P. falciparum malaria seemed to be more strongly linked to environmental features than that of P. vivax malaria, within these buffers. The incidence of P. falciparum malaria in children was strongly correlated with proportions of bare soil (r = -0.69), land under high vegetation (r = 0.68) and primary forest (r = 0.54), landscape division (r = 0.48) and the number of inhabited houses (r = -0.60). The incidence of P. vivax malaria was associated only with landscape division (r = 0.49). CONCLUSIONS: The proposed methodology provides a simple and general framework for objective characterisation of the landscape to account for field observations. The use of this method enabled us to identify different optimal observation horizons around houses, depending on the Plasmodium species considered, and to demonstrate significant correlations between environmental features and the incidence of malaria.
ISSN: 1476-072X

inserm-00674075
http://www.hal.inserm.fr/inserm-00674075
http://www.hal.inserm.fr/inserm-00674075/document
http://www.hal.inserm.fr/inserm-00674075/file/1476-072X-10-65.pdf
DOI : 10.1186/1476-072X-10-65

Éditeur(s) : HAL CCSD Public Library of Science
Résumé : International audience
BackgroundSince the discovery of thioautotrophic bacterial symbiosis in the giant tubeworm Riftia pachyptila, there has been great impetus to investigate such partnerships in other invertebrates. In this study, we present the occurrence of a sulphur-oxidizing symbiosis in a metazoan belonging to the phylum Cnidaria in which this event has never been described previously.Methodology/Principal FindingsScanning Electron Microscope (SEM), Transmission Electron Microscope (TEM) observations and Energy-dispersive X-ray spectroscopy (EDXs) analysis, were employed to unveil the presence of prokaryotes population bearing elemental sulphur granules, growing on the body surface of the metazoan. Phylogenetic assessments were also undertaken to identify this invertebrate and microorganisms in thiotrophic symbiosis. Our results showed the occurrence of a thiotrophic symbiosis in a cnidarian identified as Cladonema sp.Conclusions/SignificanceThis is the first report describing the occurrence of a sulphur-oxidizing symbiosis in a cnidarian. Furthermore, of the two adult morphologies, the polyp and medusa, this mutualistic association was found restricted to the polyp form of Cladonema sp.
ISSN: 1932-6203

hal-01203244
https://hal.univ-antilles.fr/hal-01203244
https://hal.univ-antilles.fr/hal-01203244/document
https://hal.univ-antilles.fr/hal-01203244/file/Plos%20Cladonema%20%281%29.pdf
https://hal.univ-antilles.fr/hal-01203244/file/Plos%20Cladonema.pdf

Éditeur(s) : HAL CCSD Oxford University Press (OUP)
Résumé : International audience
Defining homologous genes is important in many evolutionary studies but raises obvious issues. Some of these issues are conceptual and stem from our assumptions of how a gene evolves, others are practical, and depend on the algorithmic decisions implemented in existing software. Therefore, to make progress in the study of homology, both ontological and epistemological questions must be considered. In particular, defining homologous genes cannot be solely addressed under the classic assumptions of strong tree thinking, according to which genes evolve in a strictly tree-like fashion of vertical descent and divergence and the problems of homology detection are primarily methodological. Gene homology could also be considered under a different perspective where genes evolve as ``public goods,'' subjected to various introgressive processes. In this latter case, defining homologous genes becomes a matter of designing models suited to the actual complexity of the data and how such complexity arises, rather than trying to fit genetic data to some a priori tree-like evolutionary model, a practice that inevitably results in the loss of much information. Here we show how important aspects of the problems raised by homology detection methods can be overcome when even more fundamental roots of these problems are addressed by analyzing public goods thinking evolutionary processes through which genes have frequently originated. This kind of thinking acknowledges distinct types of homologs, characterized by distinct patterns, in phylogenetic and nonphylogenetic unrooted or multirooted networks. In addition, we define `` family resemblances'' to include genes that are related through intermediate relatives, thereby placing notions of homology in the broader context of evolutionary relationships. We conclude by presenting some payoffs of adopting such a pluralistic account of homology and family relationship, which expands the scope of evolutionary analyses beyond the traditional, yet relatively narrow focus allowed by a strong tree-thinking view on gene evolution.
ISSN: 0737-4038

hal-01544794
https://hal.archives-ouvertes.fr/hal-01544794
DOI : 10.1093/molbev/mst228

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
The estrogen receptor (ER) is a transcription factor that binds under 17-b-estradiol (E2) stimulation as homodimer to a short DNA consensus sequence named estrogen response element (ERE). The ER/ERE interaction has been assessed by several research groups through different methodologies notably by surface plasmon resonance (SPR) techniques. The biochemical parameters and conditions (solvent, ER concentration, salt, time and temperature) used to prepare samples before analysis were very different from one study to another. But no studies have aimed to compare the effect of these modifications on ER/ERE interaction. Therefore the main objective of the present paper was to assess the influence of biochemical parameters onto the ER/ERE interaction with the final aim to improve the comprehension of this interaction. Our results highlighted that parameters like solvent, ER concentration, salt and surfactant concentration, temperature and time deeply modify ER/ERE interaction. Nevertheless, the dimer formation under E2 stimulation occurred with all tested conditions. Altogether, incubation parameters of ER with E2, deeply modify its binding level onto ERE. These data constitute an important key point to consider for the improvement of ER/ERE detection method depending upon the aim of the study (interaction measurement, environmental detection, development of new technologies or devices).
ISSN: 0003-9861

hal-00936061
https://hal.archives-ouvertes.fr/hal-00936061
https://hal.archives-ouvertes.fr/hal-00936061/document
https://hal.archives-ouvertes.fr/hal-00936061/file/Impactsur biochemical_design_on_estrogen_receptor_estrogen_response_element_interaction_by_surface_plasmon_resonance_technology-accepted.pdf
DOI : 10.1016/j.abb.2013.11.006

Éditeur(s) : Springer
Résumé : The compilation of results obtained on three giant piston cores from the Whittard, Shamrock and Guilcher turbidite levees reveals a high-resolution stratigraphic record for the Bay of Biscay. Due to the abundance of reworked sediments in these sedimentary environments, a specific methodological approach, based on an X-ray-assisted subsampling phase associated with sedimentological, geochemical and micropalaeontological analyses, was implemented. With an accurate chronological framework, this multi-proxy investigation provides observations on the 'Fleuve Manche' palaeoriver and the British-Irish Ice Sheet (BIS) histories over the last 20,000 years. The results obtained highlight the direct influence of the decay of the BIS on the Bay of Biscay deep-sea clastic sedimentation during the last European deglacial phase. During this period, the annual BIS cycle of meltwater seems enough to generate seasonal turbidity currents associated with exceptional sedimentation rates in all the Celtic and Armorican turbidite systems. With very high sedimentation rates, the turbidite levees represent the main deep-sea clastic depositional area. Long coring combined with a very careful subsampling method can provide continuous high-resolution palaeoenvironmental signals.
Geo-Marine Letters (0276-0460) (Springer), 2006-12 , Vol. 26 , N. 6 , P. 317-329

Droits : 2006 Springer Science+Business Media
http://archimer.ifremer.fr/doc/2006/publication-2142.pdf
DOI:10.1007/s00367-006-0048-9
http://archimer.ifremer.fr/doc/00000/2142/

Éditeur(s) : HAL CCSD
Résumé : Spatial variability of ground motion may be explained by local soil conditions; it is the so-called "site effects". Site effects are responsible for increasing duration and important amplification of strong ground motion during earthquakes and must be considered as a key parameter in local seismic hazard assessment. French West Indies are prone to strong site effects because of a particular geology, characterized by soft soil deposits and strong alteration of volcanic deposits. In this framework, and considering that French West Indies are considered as a high seismicity level zone in the French building code, part of seismic hazard mitigation policy consists in technical studies to perform identification and mapping of zones characterized by homogeneous seismic response and quantification of associated ground motion. It is the aim of seismic microzonations. In this presentation, we will expose the methodology used on the scale of municipalities for mapping homogeneous seismic areas, based on a study of geological and geotechnical conditions and some geophysical testings. Then, a study of vulnerability of buildings allows to estimate the probability of damage on various sectors for a scenario of risk corresponding to the seismic microzonation.
19ème Conférence Géologique de la Caraïbe
Le Gosier, Guadeloupe, France

hal-00614300
https://hal-brgm.archives-ouvertes.fr/hal-00614300

Éditeur(s) : Université des Antilles Études caribéennes
Résumé : Le Bénin, pays de l’Afrique de l’Ouest est confronté à la destruction des terres humides particulièrement dans la partie sud du pays. Les terres humides riches biodiversité sont importantes tant pour les humains que pour milieu naturel. La menace la plus importante est la pression de l’anthropique. Même si ce territoire est reconnu par la Convention Ramsar, la destruction continue. En 1995 le gouvernement a décidé de créer une aire de gestion communautaire pour ces territoires. L’objectif de cette recherche est de comprendre les grands défis liés à la mise en œuvre de la gestion communautaire des milieux humides à travers une étude de cas, en l’occurrence celui de la vallée du Sitatunga. Pour atteindre cet objectif, un séjour de 3 mois a été effectué sur le site. Des entrevues semi-dirigées ont été alors réalisées. Les résultats montrent que la vallée du Sitatunga est considérée comme inutile, voire nuisible, par les populations riveraines rencontrées dans le cadre de l’étude, qui sont davantage préoccupées à se sortir de leur état de pauvreté. Les traditions et valeurs autrefois attribuées à la conservation des milieux humides ont quasiment disparu et l’individualisme est grandissant. Il importe de tenir compte de tous ces facteurs pour espérer véritablement préserver ces milieux. D’un autre côté, parlant de gestion de l’environnement et plus particulièrement de gestion des milieux humides à l’échelle béninoise, le constat n’est pas reluisant. En effet, l’État étant donné son état de sous-développement et donc de manque de ressources, à du mal à coordonner ces activités. Il est de même pour les ONG. La situation est accentuée par l’état des relations entre ONG et structures de l’État qui se considèrent davantage comme des adversaires que comme des partenaires ce qui affecte l’efficacité des activités menées. Pour que la gestion communautaire devienne une réalité, il importe qu’un partenariat soit établi entre les différents acteurs liés à la gestion de la vallée du Sitatunga en particulier et des milieux humides en général : les ONG, l’État et les communautés locales.
Bénin, a country in West Africa is actually facing the destruction of its wetlands, especially those in the southern part of the country. The wetlands which their richness in natural resources are important for both human and wildlife are also threatened by many factors. The most important threat is population pressure. Although recognised as Ramsar sites, the destruction continues. In 1995, the Government has decided to create community protected areas in this part of the country. The objective of this research is to understand the main challenges around the community management of wetlands. The case of the Sitatunga valley, in south Bénin has been studied. The methodology used consisted on interviews with stakeholders during a period of 3 months. The results show that, although the good intentions of community management, its practical application is not easy, and reveal many difficulties in its practical application. The site although rich in biodiversity and used as refuge for several species, is regarded as useless even harmful by the bordering populations, which are more worried by their poverty state. The traditions and values formerly allotted to the wetlands almost disappeared and individualism is growing. It is important to take into account all these factors to truly hope to preserve these wetlands. The study shows that management of the wetlands on a Beninese scale is also difficult. Indeed, the government through its structures struggles to coordinate its activities. It is the same for NGOs. The situation is accentuated by the poor relations between NGOs and government institutions which consider each other more as adversaries than as partners. This affects the effectiveness of the undertaken activities. It is then important for all the stakeholders (NGOs, Government and local communities) to install a partnership to help achieve community management objectives.
Bénin

Droits : info:eu-repo/semantics/openAccess
urn:doi:10.4000/etudescaribeennes.3630
http://journals.openedition.org/etudescaribeennes/3630

Éditeur(s) : Ecole Nationale Supérieure Agronomique de Rennes (ENSAR)
Résumé : Artificial Fish Aggregating Devices (FADs) are known to concentrate tropical tunas. This aggregative behaviour drastically increases the vulnerability of these species to fishing. Alternatively, FADs can be used as oceanic observatories to study the aggregative behaviour of large pelagic fish. We conducted sea surveys in Martinique (Lesser Antilles) to i) establish a typology of the pelagic fish aggregations found around moored FADs ii) study their relations with their biotic and abiotic environment and the local fishery. The mean biomass of large pelagic fish aggregations was also estimated to provide scientific inputs to achieve a sustainable management of the moored FAD fishery. The first part presents the background of the study. We introduce the regional pelagic ecosystem, the aggregative behaviour of pelagic fish around FADs and the Martinican moored FAD fishery. The second part begins with a presentation of the conceptual framework of the study: the hierarchy theory. Observation scales and survey methodology are therefore described. Repeated echosounder surveys run in a star pattern were conducted around 2 moored FADs, in combination with underwater video observations, classical fishing experiments and CTD profiles. In the third part, the elements of the [moored FAD ¿ pelagic fish - environment - fishing] system and their interactions are numerically characterised in the vertical plane. The main type of pelagic fish aggregation was a large aggregation distributed in sub-surface (40-100 m) within a radius of 400 m of the FAD. This aggregation was mostly made of 60 cm FL blackfin tunas (Thunnus atlanticus). It appeared at sunrise and mostly spread away in the late afternoon. It was observed during all daytime surveys. The average density and the vertical structure of the micronektonic sound scattering layers (SSLs) were assessed locally around a FAD for 48h cycles. These SSLs descriptors showed positive correlation with the size and the abundance of the sub-surface tuna aggregation. Whereas this aggregation accounted for about 95% of the total biomass aggregated around a moored FAD, it was nearly unexploited by the local commercial fishermen. The fourth part focuses on the sub-surface tuna aggregation. A high variability of the spatial distribution of the aggregation was evidenced in the horizontal plane at daily, day to day and monthly temporal scales. These variations were related to fluctuations of the global abundance of the aggregation. The daytime average density of sub-surface tuna was modelled as a function of the distance to FAD, within an advection-diffusion framework. Based on these results, a universal kriging model was designed to assess the mean maximum daily biomass of the sub-surface tuna aggregation. This mean biomass estimate yielded 11 tons with an estimation error of 26%. To conclude, we present a hierarchical organization in space and time of a sub-surface tuna population distributed within a network of moored FADs, from micro to meso-scale. We suggest that the spatial distribution of tunas can be explained from fine to coarse-scales by behavioural processes (self-organization, feeding, aggregative behaviour) whereas their spatial distribution is mainly forced by environmental processes at broader scales.
L'utilisation de Dispositifs de Concentration de Poissons permet de provoquer la formation de larges agrégations de thonidés autour de dispositifs artificiels, ce qui augmente considérablement la vulnérabilité de ces ressources vis-à-vis de l'exploitation halieutique. Les DCP peuvent également être utilisés en tant qu'observatoires océaniques, afin d'étudier le comportement agrégatif du macronecton pélagique. Nous avons ainsi réalisé des observations autour de DCP ancrés en Martinique, afin de définir une typologie des agrégations de macronecton et de étudier leurs relations avec leur environnement biotique, abiotique et l'exploitation halieutique locale. Nous avons ensuite estimé la biomasse moyenne de macronecton agrégé autour d'un DCP ancré, afin de fournir des éléments scientifiques nécessaires à une gestion durable de ces ressources. La première partie présente le contexte de l'étude i.e. l'écosystème pélagique régional, le phénomène d'agrégation du macronecton autour des DCP et la pêche associée aux DCP ancrés en Martinique. La deuxième partie introduit la théorie de la hiérarchie qui a fourni le cadre conceptuel de l'étude et présente les échelles et méthodes d'observation. Le principal outil d'observation est un échosondeur scientifique, mis en oeuvre le long de parcours en étoile autour du DCP. Les prospections acoustiques ont été combinées à des observations vidéo sous marines, des pêches expérimentales et un suivi in-situ de l'environnement abiotique. La troisième partie présente une typologie des éléments constituant le système [DCP ancré - macronecton - environnement - pêche] dans le plan vertical et précise leurs interactions. Le type d'agrégation de macronecton dominant est une grande agrégation composée d'une majorité de thons noirs (Thunnus atlanticus) de taille moyenne (60 cm) distribuée en sub-surface (40-100 m), dans un rayon de 300 m autour de la tête des DCP. Cette agrégation se forme au lever du soleil et se disperse presque totalement dans l'après midi. Elle a été observée de jour lors de toutes les campagnes. Une corrélation positive entre la densité et la structure moyenne des couches micronectoniques diurnes évaluée localement autour du DCP au cours de 48 h et les dimensions et l'énergie acoustique de l'agrégation de thons de subs-surface a été mise en évidence. Malgré le fait que cette agrégation représente en moyenne 95 % de l'énergie acoustique du macronecton autour des DCP, elle est presque inexploitée par les pêcheurs artisans locaux. La quatrième partie met en évidence les fortes variations conjointes de la distribution spatiale dans le plan horizontal de la densité de l'agrégation de thons de sub-surface et de son abondance globale. Ces variations ont été observées au cours du cycle nycthéméral et aux échelles inter-journalières et mensuelles. La distribution spatiale moyenne de la densité diurne de l'agrégation en fonction de la distance au centre de gravité de l'agrégation est cependant très stable et peut être modélisée au moyen d'une équation d'advection-diffusion. Un modèle de krigeage universel, utilisant les résultats du modèle d'advection-diffusion, a permis d'évaluer la biomasse maximale journalière moyenne de l'agrégation de thons de sub-surface à une dizaine de tonnes, avec un coefficient de variation d'estimation de 26%. Nous proposons une représentation hiérarchique synthétique de la distribution spatiale d'une sous-population de thons dans un réseau de DCP ancrés de la micro à la méso-échelle. Nous suggérons que la distribution spatiale des thons est déterminée principalement à l'échelle fine (100m-1km) et à l'échelle grossière (1-10 km) par des processus comportementaux (auto-organisation, agrégation, nutrition) et par des processus environnementaux à échelle plus large.

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/2006/these-1735.pdf
http://archimer.ifremer.fr/doc/2006/sup-1735.pdf
http://archimer.ifremer.fr/doc/00000/1735/

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
In this work we perform a statistical analysis of global solar radiation measured at two sites, Petit Canal and Pointe a Pitre, 38 km distant from, Guadeloupe, French West Indies. We have established a correlation model based on the coefficient of variation assuming a time scale separation. The coefficient of variation is calculated on 10 min interval with data measured at 1 Hz. This analysis highlights the dynamic correlation that can occur between measurements from two different sites with a time step of 1 s. From these results, knowing the coefficient of variation on a site, we have established a new correlation model on this parameter for another site. A diagram linking the standard deviation for the studied sites, for a given coefficient of variation is proposed for correlated and non-correlated cases. Moreover this analysis evidences the existence of a threshold time under which there is no significant correlation. The methodology and the model can be applied to any other sites to establish diagrams of the coefficient of variation.This model can be useful in choosing new sites of PV production in establishing correlation from on site to another
ISSN: 0960-1481

hal-01528078
https://hal.archives-ouvertes.fr/hal-01528078
DOI : 10.1016/j.renene.2015.10.049

Éditeur(s) : HAL CCSD
Résumé : International audience
After an important methodological presentation of lithic technology analysis, we present in this paper a diachronical study of the martinican Amerindian flint-knapping technology. This work completes the results of ceramics analysis and open new ways of understanding of the prehistorical cultural changes.
L'analyse technologique des industries lithiques a pour objectif la caractérisation des méthodes et des techniques de taille. Elle s'appuie sur la conception de l'acte technique comme un fait culturel à part entière. L'analyse d'un système technique permet alors la caractérisation d'un ensemble culturel et par là même la comparaison de différents ensembles. L'analyse technologique du débitage en particulier s'appuie sur la lecture et l'interprétation des différents stigmates liés à la fracture conchoïdale. Ces stigmates permettent de déterminer, la nature, la direction et la chronologie des enlèvements, et ainsi de réintégrer chaque pièce au sein d'une chaîne opératoire de débitage. C'est ce type d'étude que nous avons conduite en Martinique. Nous avons ainsi pu revoir, à la lumière de l'évolution des méthodes de débitage, la séquence culturelle de cette île. Nous pouvons ainsi mieux appréhender l'importance des changements, mis en évidence par l'étude de la céramique, par la prise en compte d'autres éléments du système technique.
Actes du XVIIIéme congrès de l'Association Internationale d'Archéologie de la Caraïbe, St. George, Grenade 1999
Saint George, Grenada

hal-00966338
https://hal.univ-antilles.fr/hal-00966338
https://hal.univ-antilles.fr/hal-00966338/document
https://hal.univ-antilles.fr/hal-00966338/file/Technologie_lithique_et_caractA_risation_culturelle.pdf

Éditeur(s) : HAL CCSD
Résumé : International audience
Environmental context The safeguarding of water supplies and drinking water is a major issue when considering human health risk management. In this context, an automatic and on-site fractionation system for the detection of organic contaminants has been developed. The main goal of this system is to establish an initial diagnosis by identifying a class of substances involved in a case of pollution. Abstract This paper proposes a new approach for the preconcentration, fractionation, prediction and detection of organic micropollutants in water. The main aim of this study was to implement an innovative fractionation method and a prediction model based on the physicochemical properties of compounds and interactions with the sorbent of solid-phase extraction cartridges. Two sorbents (Strata-SAX and Oasis-HLB) and three specific eluting solvents (mixture of methanol and sodium chloride and mixtures of acetonitrile and ultrapure water) were used to separate organic compounds into five specific fractions according to their physicochemical properties (anionic and cationic or neutral compounds with various polarity). More than 75 molecules (43 molecules individually studied and a mixture with 43 molecules, including 11 molecules individually studied) including pesticides, pharmaceuticals, endocrine disruptors and polycyclic aromatic hydrocarbons, with various properties were studied, and the results showed that the elution fraction can be predicted for more than 85% of the compounds. This methodology could simplify the analytical chain by reducing detailed analysis on limited categories of compounds, and could be used for a rapid and on-site screening of organic compounds. © CSIRO 2016.
Environmental Chemistry

hal-01373945
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01373945
DOI : 10.1071/EN15135

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : Some major challenges for geophysicists and structural geologists using three-dimensional boundary element method codes (3D-BEM) are: (1) reducing the amount of memory required to solve large and dense systems and (2) incorporation of inequality constraints such as traction inequality constraints (TIC) and displacement inequality constraints (DIC). The latter serves two purposes. First, for example, inequality constraints can be used to simulate frictional slip (using TIC). Second, these constraints can prevent element interpenetration while allowing opening mode (using DIC). We have developed a method that simultaneously incorporates both types of functionality of the inequality constraints. We show that the use of an appropriate iterative solver not only avoids the allocation of significant memory for solving the system (allowing very large model computation and simplifying parallelization on multi-core processors), but also admits interesting features such as natural incorporation of TICs and DICs. Compared to other techniques of contact management (e.g., Lagrange multipliers, penalty method, or complementarity problem), this new simple methodology, which does not use any incremental trial-and-error procedures, brings more flexibility, while making the system more stable and less subject to round-off errors without any computational overhead. We provide validations and comparisons of the inequality constraints implementation using 2D analytical and numerical solutions.
ISSN: 1420-0597

hal-00561035
https://hal.archives-ouvertes.fr/hal-00561035
DOI : 10.1007/s10596-009-9170-x