Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
The Ibituruna quartz-syenite was emplaced as a sill in the Ribeira-Aracuai Neoproterozoic belt (Southeastern Brazil) during the last stages of the Gondwana supercontinent amalgamation. We have measured the Anisotropy of Magnetic Susceptibility (AMS) in samples from the Ibituruna sill to unravel its magnetic fabric that is regarded as a proxy for its magmatic fabric. A large magnetic anisotropy, dominantly due to magnetite, and a consistent magnetic fabric have been determined over the entire Ibituruna massif. The magmatic foliation and lineation are strikingly parallel to the solid-state mylonitic foliation and lineation measured in the country-rock. Altogether, these observations suggest that the Ibituruna sill was emplaced during the high temperature (similar to 750 degrees C) regional deformation and was deformed before full solidification coherently with its country-rock. Unexpectedly, geochronological data suggest a rather different conclusion. LA-ICP-MS and SHRIMP ages of zircons from the Ibituruna quartz-syenite are in the range 530-535 Ma and LA-ICP-MS ages of zircons and monazites from synkinematic leucocratic veins in the country-rocks suggest a crystallization at similar to 570-580 Ma, i.e., an HT deformation >35My older than the emplacement of the Ibituruna quartz-syenite. Conclusions from the structural and the geochronological studies are therefore conflicting. A possible explanation arises from Ar-40-Ar-39 thermochronology. We have dated amphiboles from the quartz-syenite, and amphiboles and biotites from the country-rock. Together with the ages of monazites and zircons in the country-rock, Ar-40-Ar-39 mineral ages suggest a very low cooling rate: <3 degrees C/My between 570 and similar to 500 Ma and similar to 5 degrees C/My between 500 and 460 Ma. Assuming a protracted regional deformation consistent over tens of My, under such stable thermal conditions the fabric and microstructure of deformed rocks may remain almost unchanged even if they underwent and recorded strain pulses separated by long periods of time. This may be a characteristic of slow cooling "hot orogens" that rocks deformed at significantly different periods during the orogeny, but under roughly unchanged temperature conditions, may display almost indiscernible microstructure and fabric.
ISSN: 0040-1951

hal-00445262
https://hal.archives-ouvertes.fr/hal-00445262
DOI : 10.1016/j.tecto.2009.02.039

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
The ultramafic rocks of the Collo region in northeastern Algeria crop out as “stratified” masses that cut across older metamorphic formations of the Petite Kabylie basement. Based on petrological compositions and mineralogical observations, these rocks are mainly peridotites and serpentinites. The peridotites are identified as lherzolites, but dunites may occur rarely. The lherzolites are composed of olivine, orthopyroxene, clinopyroxene and chromian spinel. Their chemical composition shows high MgO (34.4–37.5 wt%), Cr (0.14–0.27 wt%), Ni (0.14–0.26 wt%) and Co (34–133 ppm) contents and low CaO and Al2O3 concentrations (0.02–2.2 wt% and 0.5 to 2.8 wt%, respectively). The chromite, which represents approximately 1–3% of the rock, is ubiquitous and shows two different generations: primary millimetric euhedral crystals and secondary fine xenomorphic grains and interstitial aggregates. The primary chromites are alumino-ferro-magnesian crystals that show high Al2O3 (25.77%–27.36%) and MgO (10.70%–13.36%). Cr# (100 × Cr/(Al + Cr)) ranges from 45 to 48, and Mg# (100 × Mg/(Mg + Fe2+)) from 49 to 59. The secondary interstitial grains are iron-rich chromites. They show low Al2O3 (4.67%–9.54%) and MgO (4.60%–4.65%). Cr# is relatively high (77–88), whereas Mg# shows relatively low values, ranging from 22 to 25. Primary chromite and whole-rock chemistry show that the Collo ultramafic rocks belong to Alpine-type peridotites that were emplaced within an orogenic setting. The oxygen isotopic composition of both peridotites and chromites is consistent with their derivation from a mantle source (δ18O ranges from +3.0 to +5.9‰). Low δ18O values (<+4.4‰) are recorded in serpentinites and are attributed to the effect of serpentinization processes through high-temperature metasomatic fluids. Magnesite-bearing serpentinites show the lowest δ18O values. These are interpreted as the result of surface water input.
ISSN: 0899-5362

hal-01468003
https://hal.archives-ouvertes.fr/hal-01468003
DOI : 10.1016/j.jafrearsci.2016.10.012

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : International audience
Electrical resistivity soundings are used by geophysicists to determine the structure and composition of the Earth's crust and mantle and to explore natural resources (ore, oil, gas, water). Their interpretations in terms of composition and in-situ physical conditions depend mainly on laboratory measurements of electrical conductivity of rocks at simulated crustal conditions of temperature, pressure, saturation and pore pressures. These measurements present a numbers of limitations, in particular, in the case where conductive pore fluids are present, as in the case of deep reservoir conditions, where temperature exceeds 250 A degrees C. Here, we present a new cell capable of measuring electrical conductivity of large saturated samples at confining pressure up to 200 MPa, pore pressure up to 50 MPa, and temperature up to 500 A degrees C. The measurement cell has been developed in a commercial, internally heated, gas pressure apparatus (Paterson press). It is based on the concept of "guard ring" electrode, which is adapted to samples that are jacketed by a very conductive, metallic material. Numerical modeling of the current flow in the electrical cell allowed defining the optimal cell geometry. Calibration tests have been performed on Fontainebleau sandstones saturated with electrolytes of different conductivities, up to 350 A degrees C. The resulting electrical formation factor and temperature dependence of electrical conductivity are in very good agreement with previous studies. This new cell will improve the exploration and exploitation of deep fluid reservoirs, as in unconventional, high enthalpy geothermal fields. In particular, the investigations address possible effects of fluid-rock interactions on electrical resistivity of a reservoir host rock.
ISSN: 0169-3913

hal-00681997
https://hal.archives-ouvertes.fr/hal-00681997
DOI : 10.1007/s11242-011-9846-2

Éditeur(s) : HAL CCSD
Résumé : Karstic aquifers represent the most important fresh water reservoirs in many regions of the world like the Mediterranean Basin. However, because of complex processes of karstification, those aquifers are highly heterogeneous at all spatial scales and vulnerable to contamination. In this dissertation, we studied the potential of gravimetry and ambient seismic noise for hydrological modeling in karstic areas.The dolomitic area surrounding the “GEK” observatory in the Durzon catchment on the Larzac plateau, in France, is the preferred site for these studies. Inside the observatory, a superconducting gravimeter dedicated to hydrology has continuously measured gravity changes since 2011 with high precision, undertaken for the first time on a karst. From this gravity monitoring, we made conceptual hydrological models which laid the foundation of 1-D flow physical models. Indeed, gravimetry is an integrative hydro-geophysical method which allows 1) to consider the epikarst, locally heterogeneous as an equivalent tabular medium and 2) to define the types of transfer (fast & slow) occurring at the site. Especially, the lack of fast transfer through the GEK epikarst was precisely quantified for the first time at the field scale (~100m). Gravity-driven water mass balance with local meteorological data (evapotranspiration from a flux tower and precipitation) allowed setting the bottom outlet of the model to 1 mm.day-1. This flow has proved to be representative of the low-flow discharge at the only spring which represents all groundwater outflows from the catchment. This result supposes the homogeneity of the dolomitic epikarst almost at the basin scale. Model parameters were next calibrated using one year of ambient seismic noise monitored at two stations. Phase velocity changes obtained by cross-correlating the noise between 6 and 8 Hz were used as a ”timer” to follow the water infiltration between a depth of 30 and 60 meters. Thus, monitoring seismic velocity changes using ambient seismic noise demonstrates great potential for the study of deep and complex critical zones and could fill the instrumental gap currently existing in hydrology.Time-lapse gravity measurements with a spring-based portable gravimeter have also demonstrated the different behavior of two epikarsts and their variability at the scale of a few hundred meters. Monthly measurements around the observatory revealed the spatial homogeneity of this dolomitic epikarst: all the stations showed the same water storage changes. On the contrary, seasonal surface to depth gravity measurements along the underground passage of the Saint-Ferréol sinkhole, in limestone, have shown fast transfer and strong spatial variability of water storage. Lithology is then expected to play a part in the epikarst capacity to retain water. The precision needed to measure the weak hydrological induced signals during those surveys required robust methodology and an ambient temperature effect on measurements with spring-based gravimeter was observed in the field and quantified in the laboratory.
Les aquifères karstiques représentent des ressources en eau essentielles dans de nombreuses régions du monde comme le bassin Méditerranéen. Cependant, de par les processus complexes de karstification, ces aquifères sont hétérogènes à de nombreuses échelles et vulnérables. Dans cette thèse, nous étudions le potentiel de la gravimétrie et du bruit sismique ambiant pour la modélisation hydrologique en milieu karstique.Le site dolomitique de l’observatoire « GEK », sur le bassin du Durzon dans le Larzac, est le site d’étude privilégié de ces travaux. Dans l’observatoire, un gravimètre supraconducteur dédié à l’hydrologie mesure depuis 2011 les variations de gravité en continu et à une très haute précision, pour la première fois sur un karst. Des modèles hydrologiques conceptuels ont été réalisés à partir de cette surveillance gravimétrique et ont permis de poser les bases de modèles physiques d’écoulements 1-D. En effet la gravimétrie, intégratrice, permet 1) de considérer l’épikarst localement hétérogène comme un milieu tabulaire équivalent et 2) de définir les types de transfert à l’œuvre sur le site. En particulier, l’absence de transfert rapide dans l’épikarst a été quantifiée avec précision pour la première fois à l’échelle du terrain (~100m). A l’aide de données météorologiques locales, un bilan de masse précis a permis de définir le flux en limite inférieure du modèle à 1 mm.jour-1. Ce flux s’est montré représentatif du débit de basses-eaux de la source drainant l’ensemble du bassin. Ce résultat suppose une homogénéité de l’épikarst dolomitique quasiment à l’échelle du bassin. Les paramètres des modèles physiques ont ensuite pu être calibrés à l’aide d’un an d’intercorrélation du bruit sismique ambiant entre deux stations. Les variations de vitesses de phase obtenues entre 6 et 8Hz nous ont servi de « chronomètre » pour suivre l’infiltration entre 30 et 60m de profondeur. La surveillance passive des variations de vitesses sismiques par intercorrélation du bruit sismique ambiant montre ainsi un fort potentiel pour l’étude des zones critiques profondes et complexes à l’échelle du terrain et peut combler la lacune instrumentale qui existe actuellement en hydrologie.Des campagnes répétées de mesures avec un gravimètre portable à ressort ont également mis en évidence le fonctionnement différent de deux épikarsts et leur variabilité à l’échelle de la centaine de mètres. Des mesures mensuelles autour de l’observatoire ont mis en évidence l’homogénéité spatiale de cet épikarst dolomitique : toutes les stations ont les mêmes variations temporelles de stock d’eau. Au contraire, des mesures saisonnières en surface et en profondeur le long de la galerie souterraine calcaire de l’abîme de Saint-Ferréol ont montré une variabilité spatiale forte du stockage ainsi que du transfert rapide. La lithologie de l’épikarst est donc suspectée de jouer un rôle dans sa capacité de stockage. Lors de ces campagnes, la faiblesse du signal recherché a nécessité une méthodologie précautionneuse et un effet de température sur les mesures des gravimètres relatifs à ressort a été observé sur le terrain et quantifié en laboratoire.
https://tel.archives-ouvertes.fr/tel-01649606

NNT : 2016MONTT128
tel-01649606
https://tel.archives-ouvertes.fr/tel-01649606
https://tel.archives-ouvertes.fr/tel-01649606/document
https://tel.archives-ouvertes.fr/tel-01649606/file/2016_FORES_archivage.pdf

Éditeur(s) : HAL CCSD Mineralogical Society of America
Résumé : International audience
Crystallization experiments were conducted at 200 MPa to determine the effect of small amounts of H2O on the liquidus temperature of basaltic melts in which plagioclase is the liquidus phase. The H2O concentrations in the quenched glasses, determined by infrared spectroscopy and Karl-Fischer titration, ranged from 0.02 to 4.2 wt% H2O. The dry liquidus temperature at 200 MPa was estimated from experiments at 1 atm (H2O-free) and from the known pressure dependence of plagioclase crystallization temperature. The effect of water (expressed as wt% H2O) on the plagioclase liquidus temperature is nonlinear and diminishing with increasing melt H2O concentrations. According to our new experimental data, it can be empirically predicted with following equation: Formula where CH2O is the water concentration in the melt (wt%), TDRY, and TWET are plagioclase crystallization temperatures in water-free and water-bearing systems, respectively. The relationship between CH2O and liquidus temperature worked out in this study is valid for a range of basaltic compositions, ranging from high-alumina basalts to basaltic andesites. The combination of the empirical equation predicting the liquidus depression of plagioclase with previous models predicting the olivine liquidus curve is useful to determine the liquidus temperature in various H2O-bearing basaltic systems in which either plagioclase or olivine is the liquidus phase.
ISSN: 0003-004X

hal-00757600
https://hal.archives-ouvertes.fr/hal-00757600
DOI : 10.2138/am.2012.4100

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : International audience
Up to now, several studies have investigated estrogen receptor (ER)–estrogen response element (ERE) interaction using biosensors such as surface plasmon resonance. These strategies have aimed to understand the molecular mechanism of such interaction as well as the effect of the ligand on this interaction. These approaches start to be used to determine the mechanisms of protein/DNA interaction, in particular in the context of drug discovery or environmental applications. However, some physical and biochemical parameters (incubation time, temperature, protease inhibitor cocktail, and bovine serum albumin (BSA)) are not completely described in the literature and could deeply modify the obtained results. This paper aims to focus not only on the preliminary steps of sample preparation such as protein thawing and incubation conditions (time and temperature) but also on the evaluation of protease inhibitor cocktail and BSA effect on the measurement of ER–ERE interactions.
ISSN: 1618-2642

hal-01418341
https://hal.archives-ouvertes.fr/hal-01418341
https://hal.archives-ouvertes.fr/hal-01418341/document
https://hal.archives-ouvertes.fr/hal-01418341/file/Estrogen%20Receptor%20preparation%20effects_accepted.pdf
DOI : 10.1007/s00216-016-9967-0

Éditeur(s) : HAL CCSD Wiley
Résumé : Tank bromeliads form a conspicuous, yet neglected freshwater habitat in Neotropical forests. Recent studies driven by interests in medical entomology, fundamental aspects of bromeliad ecology and experimental research on food webs have, however, prompted increasing interest in bromeliad aquatic ecosystems. As yet, there is nothing in the literature about the life histories and environmental drivers of invertebrate population dynamics in tank bromeliads. Based on fortnightly samples taken over oneyear, size frequency plots and individual dry masses allowed us to establish the life cycles and growth rates of the dominant aquatic invertebrates in a common bromeliad species of French Guiana. Linear mixed-effect models and Mantel tests were used to predict changes in density, biomass, and growth rates in relation to temperature, rainfall, humidity and detrital resources. Annual variations in invertebrate densities and biomasses could be described according to three types of distribution: unimodal, bimodal or almost constant. Despite seasonal variations, precipitation, temperature, relative humidity and detritus concentration accounted significantly for changes in density and biomass, but we found no significant responses in growth rates of most invertebrate species. Species rather displayed non-seasonal life cycles with overlapping cohorts throughout the year. There was also a trend for delayed abundance peaks among congeneric species sharing similar functional traits, suggesting temporal partitioning of available resources. Beyond novel knowledge, quantitative information on life histories is important to predict food-web dynamics under the influence of external forcing and self-organisation. Our results suggest that changes in species distribution that will affect population dynamics through biotic interactions in space and/or time could have greater effects on food webs and ecosystem functioning than changes in environmental factors per se.
ISSN: 0046-5070

hal-01607779
https://hal.archives-ouvertes.fr/hal-01607779
DOI : 10.1111/fwb.12862
PRODINRA : 407311

Éditeur(s) : HAL CCSD Human Kinetics
Résumé : International audience
The authors tested the effect of cold water ingestion during high-intensity training in the morning vs the evening on both core temperature (T C) and thermal perceptions of internationally ranked long-distance swimmers during a training period in a tropical climate. Nine internationally ranked long-distance swimmers (5 men and 4 women) performed 4 randomized training sessions (2 in the evening and 2 in the morning) with 2 randomized beverages with different temperatures for 3 consecutive days. After a standardized warm-up of 1000 m, the subjects performed a standardized training session that consisted of 10 × 100 m (start every 1′20″) at a fixed velocity. The swimmers were then followed for the next 3000 m of the training schedule. Heart rate (HR) was continuously monitored during the 10 × 100 m, whereas T C , thermal comfort, and thermal sensation (TS) were measured before and after each 1000-m session. Before and after each 1000 m, the swimmers were asked to drink 190 mL of neutral (26.5 ± 2.5°C) or cold (1.3 ± 0.3°C) water packaged in standardized bottles. Results demonstrated that cold water ingestion induced a significant effect on T C , with a pronounced decrease in the evening, resulting in significantly lower mean T C and lower mean delta T C in evening cold (EC) than in evening neutral (EN), concomitant with significantly lower TS in EC than in EN and a significant effect on exercise HR. Moreover, although T C increased significantly with time in MN, MC, and EN, T C was stabilized during exercise in EC. To conclude, we demonstrate that a cold beverage had a significant effect on T C , TS, and HR during training in high-level swimmers in a tropical climate, especially during evening training.
ISSN: 1555-0265

hal-01163459
https://hal.univ-antilles.fr/hal-01163459

Éditeur(s) : ISTPM
Résumé : Table of Contents The Natural Environment Production centres Oyster farming centres Mussel farming centres Chapter I. - The Physicochemical Environment I. Sea Water a) Transparency, turbidity b) Temperature c) Salinity d) Dissolved gases e) Substances dissolved in the water f) Water movements g) Hydrology of the main shellfish farming centres II. Soils a) Soil properties b) Mechanical amendment of soils, its effects c) Fertilisation of soils in shellfish farming d) Changes in soils due to farming Bibliography Chapter II. - The Natural Environment Phytoplankton Zooplankton Basic biology of phytoplankton Assessment of phytoplankton production, notion of primary productivity Phytoplankton from a few shellfish farming regions Microphytobenthos Factors controlling primary productivity Toxicity of planktonic organisms; red tides Bibliography Chapter III – Alterations in the Natural Environment Pollution I. Chemical Pollution Definitions Influence of turbidity A. Telluric pollution 1o Domestic pollution 2o Agriculture-related pollution 3o Industrial pollution B. Pelagic pollution 1o Pollution through hydrocarbons Conclusion II. Bacterial Pollution Future of micro-organisms in the sea A. Specimen conditions B. Phenomena of dispersion Survival of germs in the marine environment A. Factors influencing the total microbial content B. Resistance of various groups of germs Consequences of bacterial pollutions on shellfish and shellfish farming Shellfish Shellfish farming Conclusion Bibliography
Sommaire : Le milieu naturel Les centres de production Les centres ostréicoles Les centres mytilicoles Chapitre I. - le milieu physico-chimique I. L'eau de mer a) Transparence, turbidité b) Température c) Salinité d ) Les gaz dissous e) Les substances dissoutes dans l'eau f) Les mouvements de l'eau g) Hydrologie des principaux centres conchylicoles IL Les sols a ) Propriétés des sols b) Amendement mécanique des sols, ses effets c) La fertilisation des sols en conchylicutture d) Evolution des sols du fait de la culture Bibliographie Chapitre II. - le milieu biologique Le phytoplancton Le zooplancton Biologie sommaire du phytoplancton Evaluation de la production de phytoplancton, notion de productivité primaire Phytoplancton de quelques régions conchylicoles Le microphytobenthos Facteurs contrôlant la productivité primaire Toxicité d'organismes planctoniques ; les eaux rouges bibliographie Chapitre III - les altérations du milieu naturel. Les pollutions I. Les pollutions chimiques Définitions Influence de la turbidité A. Pollution tellurique 1° Pollution d'origine domestique 2° Pollutions liées aux activités agricoles 3° Pollutions industrielles B. Pollution pélagique 1° Pollution par les hydrocarbures Conclusion II. Les pollutions bactériennes Devenir des microorganismes dans la mer A. Conditions de prélèvements B. Phénomènes de dispersion Survie des germes dans le milieu marin A. Facteurs influant sur la teneur microbienne globale B. Résistance des divers groupes de germes Conséquences des pollutions bactériennes sur les coquillages et sur la conchyliculture Les coquillages La conchyliculture Conclusion Bibliographie
Revue des Travaux de l'Institut des Pêches Maritimes (0035-2276) (ISTPM), 1974-09 , Vol. 38 , N. 3 , P. 217-337

Droits : Ifremer
http://archimer.ifremer.fr/doc/1974/publication-1776.pdf
http://archimer.ifremer.fr/doc/00000/1776/

Éditeur(s) : Public Library Science
Résumé : Global change and its associated temperature increase has directly or indirectly changed the distributions of hosts and pathogens, and has affected host immunity, pathogen virulence and growth rates. This has resulted in increased disease in natural plant and animal populations worldwide, including scleractinian corals. While the effects of temperature increase on immunity and pathogen virulence have been clearly identified, their interaction, synergy and relative weight during pathogenesis remain poorly documented. We investigated these phenomena in the interaction between the coral Pocillopora damicornis and the bacterium Vibrio coralliilyticus, for which the infection process is temperature-dependent. We developed an experimental model that enabled unraveling the effects of thermal stress, and virulence vs. non-virulence of the bacterium. The physiological impacts of various treatments were quantified at the transcriptome level using a combination of RNA sequencing and targeted approaches. The results showed that thermal stress triggered a general weakening of the coral, making it more prone to infection, non-virulent bacterium induced an 'efficient' immune response, whereas virulent bacterium caused immuno-suppression in its host.
Plos One (1932-6203) (Public Library Science), 2014-09 , Vol. 9 , N. 9 , P. 1-15

Droits : This is an open-access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 public domain dedication.
http://archimer.ifremer.fr/doc/00221/33265/31738.pdf
DOI:10.1371/journal.pone.0107672
http://archimer.ifremer.fr/doc/00221/33265/

Éditeur(s) : HAL CCSD IOS Press
Résumé : The main objectives of the present work were to test the effects of heat stress on blood rheology and to determine whether the responses can change according to the pig breeds. Thirty-six pigs from three pig's lines (n = 12 for each line) with assumed different tolerance to heat stress were compared: Large White (LW, little tolerance), Creole (CR, good tolerance) and LW × CR pigs (produced from a cross between LW and CR lines). In a first period, all pigs were exposed to a 9-d period of thermo-neutral environment (24°C; d-9 to d-1; P0). At the end of P0, six pigs from each line were slaughtered (n = 18). Then in a second period, the remaining pigs (6/breed; n = 18) were exposed to a 5-d period of heat stress (32°C; d + 1 -d + 5; P1) and thereafter slaughtered at d + 5. Rectal and skin temperatures, as well as respiratory rate, were recorded on d-1 and d + 5. At slaughter, blood was sampled for hematological and hemorheological measurements. Heat stress caused a rise of the skin temperature and respiratory rate without any changes in the rectal temperature or on the hematological and hemorheological parameters when all pigs' lines were considered. We observed a pig line effect on blood viscosity at high shear rate (375 s-1) and red blood cell deformability at 30 Pa with CR pigs having lower blood viscosity and higher red blood cell deformability than LW pigs. While the changes of blood viscosity under heat stress did not reach statistical significance in LW and CR lines, blood viscosity (at 375 s-1) increased above the temperate values in the LW × CR line. Red blood cell deformability at 30 Pa was higher in CR pigs exposed to heat stress compared to LW pigs in the same condition. In conclusion, thermal loading caused physiological stress but did not widely change the hematological and hemorheological profiles. Although some blood rheological parameters seem to vary with the pig breeds, the responses to heat stress are very similar.
ISSN: 1386-0291

hal-01210926
https://hal.archives-ouvertes.fr/hal-01210926
DOI : 10.3233/CH-131722
PRODINRA : 286489
PUBMED : 23603327

Éditeur(s) : HAL CCSD Cambridge University Press (CUP)
Résumé : We tested the response of seedlings of Dicorynia guianensis, a major timber tree species of French Guiana, to mycorrhizal symbiosis and water limitation in a semi-controlled experiment under natural light conditions. Under well-watered conditions, mycorrhizal colonization resulted in an increase of net photosynthesis, growth and phosphorus uptake. When submitted to water stress, no growth reduction of mycorrhizal seedlings was observed. Mycorrhizal seedlings were more sensitive to drought than non-mycorrhizal ones in terms of carbon assimilation, but not with regard to stomatal closure. In contrast to previous studies on temperate tree seedlings, this result precludes a mycorrhizal effect on the hydraulic properties of this species. Furthermore, our results suggest that below a specific threshold of soil moisture, carbon assimilation of D. guianensis seedlings was decreased by the mycorrhizal symbiosis. This is probably related to the competition between the plant and its host fungus for carbon allocation under low light intensity, even though it did not seem to have a significant effect on mortality in our experiment.
ISSN: 0266-4674

hal-01031901
https://hal.archives-ouvertes.fr/hal-01031901
DOI : 10.1017/S0266467405002348

Éditeur(s) : Terrapub
Résumé : A series of empirical expressions for predicting gas hydrate stability, its volume fraction out of pore space and gas hydrate mass-density were established in different systems in consideration of gas composition (CH4, C2H6, H2S) and salinity (NaCl, seawater), and pore size at temperature between 273.15 and 300 K, based on our gas hydrate thermodynamic model (Sultan et al., 2004b, c). Six of the developed expressions for predicting gas hydrate stability were validated against the available published experimental data and they were also compared with other models. At temperature 273.15 to 290.15 K, the ARDPs (Average Relative Deviation of Pressures between the prediction and the experimental data) have shown that these empirical expressions are in agreement with the experimental data as well as other models, indicating their reliability of predicting gas hydrate stability for these systems. At higher temperatures, the empirical predictions for gas hydrate stability do not well reproduce the experimental data, because they are based on van der Waals model. The empirical expressions for predicting gas hydrate stability in the systems of CH4 + H2S + H2O, CH4 + seawater + poresize, CH4 + H2S + NaCl and CH4 + CO2 + NaCl, and for evaluating gas hydrate fraction and its density need further validation due to lack of available published experimental data. However, the empirical expressions for gas hydrate fraction and its density show that the effects of pore size and salinity are negligible; gas hydrate fraction will increase if methane concentration continuously increases relatively in excess of methane solubility and decreases with pressure within gas hydrate stability zone, which is well consistent with data of natural gas hydrates in Cascadia; gas hydrate density tends to increase with ethane percentage and decrease with pressure.
Geochemical Journal (0016-7002) (Terrapub), 2008-03 , Vol. 42 , N. 2 , P. 163-175

Droits : 2008 TERRAPUB. The Geochemical Society of Japan.
http://archimer.ifremer.fr/doc/2008/publication-4958.pdf
http://archimer.ifremer.fr/doc/00000/4958/

Éditeur(s) : HAL CCSD
Résumé : International audience
Understanding subduction rheology in both space and time has been a challenge since the advent of plate tectonics. We herein focus on "subduction infancy", that is the first ~1-5 My immediately following subduction nucleation, when a newly born slab penetrates into the upper plate mantle and heats up. The only remnants of this critical yet elusive geodynamic step are thin metamorphic soles, commonly found beneath pristine, 100-1000 km long portions of oceanic lithosphere emplaced on continents (i.e., ophiolites).Through the (i) worldwide compilation of pressure-temperature conditions of metamorphic sole formation augmented by pseudosection thermodynamic modeling, (ii) calculations of the viscosity of materials along the plate interface and (iii) generic numerical thermal models, we provide a conceptual model of dynamic plate interface processes during subduction infancy (and initiation s.l.).We show in particular how major rheological switches across the subduction interface control slab penetration, and the formation of metamorphic soles. Due to the downward progression of hydration and weakening of the mantle wedge with cooling, the lower plate (basalt, sediment) and the upper plate (mantle wedge) rheologies equalize and switch over a restricted temperature-time-depth interval (e.g., at ~800°C and ~1 GPa, during 0.1-2 My, for high-temperature metamorphic sole formation). These switches result in episodes of maximum interplate mechanical coupling, thereby slicing the top of the slab and welding pieces (basalt, sediment) to the base of the mantle wedge. Similar mechanical processes likely apply for the later, deeper accretion and exhumation of high-temperature oceanic eclogites in serpentinite mélanges, or for the accretion of larger tectonic slices.This model provides constraints on the effective rheologies of the crust and mantle and general understanding, at both rock and plate scale, for accretion processes and early slab dynamics.
AGU Fall Meeting 2015
San Francisco, United States

insu-01242103
https://hal-insu.archives-ouvertes.fr/insu-01242103

Éditeur(s) : HAL CCSD
Résumé : Fault zones are major discontinuities in sedimentary basins. Understanding their role on fluid migrations is an essential issue to (i) characterize the mechanisms and kinematics of deformation and (ii) to determine the parameters which control the distribution of energetic or mineral resources. This work applies to faulting under a temperature range of 200-250°C, corresponding to that of deeply buried reservoirs as well as potentially seismogenic fault zones. The studied faults are normal faults affecting the “Grès d’Annot” Formation, a Priabonian-Rupelian siliclastic turbidite succession of the Alpine foreland basin. They are located in two distinct areas: the Moutière-Restefond area in the eastern part of the basin and the Estrop area in the western part. Vitrinite reflectance outside fault zones indicates maximal temperatures of 240-260°C at Moutière-Restefond and 170-200°C at Estrop, i.e. burial depths around 8 km and 6 km, respectively, assuming a mean geothermal gradient of 30°C/km. Burial was due to underthrusting below the Embrunais-Ubaye Alpine nappes, the difference in burial between the two areas traducing the westward taper of the nappe front.The studied faults affect alternating arkosic sandstone beds and pelite layers with offsets from centimeters to decameters. Two types of core zones are recognized: (1) the foliated core zones of the Moutière-Restefond area, where deformation dominated by pressure solution and synkinematic phyllosilicate neoformation resulted in a foliated fabric, and (2) the core zones of the Estrop area, characterized by dilatant quartz-mineralized veins and breccia. Fault and host rock petrophysical properties were measured on drill plugs, using the water porosity technique and nitrogen permeability technique under 2 Mpa of confining pressure. In the Moutière-Restefond fault zones, plug axes were oriented in three orthogonal directions corresponding to the main deformation axes (X, Y, Z) of the foliated arkose to characterize the effect of structural anisotropy. In the Estrop fault zones, where deformation does not show equivalent anisotropy, the plug axes were oriented according to the main fault plane orientation (i.e., parallel to azimuth, parallel to dip and normal). In each fault zone, the porosity of fault rocks is equivalent to that of host rocks. In the Moutière-Restefond fault zones, the plugs parallel to the X and Z axes of deformation have a permeability similar to that of the host rocks, whereas permeability parallel to the Y axis (i.e. parallel to the foliation and the main fault plane) is one order of magnitude higher. By contrast, the permeability values in the Estrop fault zones are isotropic and equivalent to the host rock values. This study highlights the importance of various types of deformation mechanisms and related fluid-rock interactions in determining different fault rock types within a similar protolith, ultimately controlling distinct petrophysical properties of fault zones.
Les zones de failles constituent des discontinuités majeures dans la croûte supérieure. Ce mémoire s’intéresse aux failles actives à des profondeurs de 5-8 km, i.e. dans des conditions pouvant jouer un rôle important (i) sur le comportement mécanique de de la croûte, en particulier sur son potentiel sismogénique et (ii) sur la compartimentation des réservoirs géologiques profondément enfouis.Les failles étudiées sont des failles normales (rejet jusqu’à 50 mètres) affectant des alternances de bancs de grès arkosiques et de pélites dans les Grès d’Annot, une formation turbiditique d’âge priabonien-rupélien du bassin d’avant-chaine alpin. Les Grès d’Annot ont été enfouis sous les nappes de l’Embrunais-Ubaye peu de temps après leur dépôt et exhumés au Miocène moyen-supérieur. L’étude a été réalisée dans deux secteurs des Alpes de Haute-Provence, (1) le secteur de l’Estrop (chaine des Trois Evéchés, dans la partie occidentale du bassin) et (2) le secteur de Point Vert-Restefond (alentours du col de la Bonette, dans la partie orientale du bassin). La réflectance de la vitrinite dans les Grès d’Annot indique des températures maximales de 160-190°C dans le secteur (1) et de 240-260 °C dans le secteur (2) , soit des profondeurs d’enfouissement de 5-6 km et 8-10 km, respectivement, dans l’hypothèse d’un gradient géothermique moyen de 25-30°C/km. A partir des observations microstructurales, de données d’inclusions de fluides, de modélisations thermodynamiques sur chlorites syncinématiques et des indices de cristallinité de l’illite, on a établi que les failles du secteur (1) ont fonctionné à une température d’environ 200°C pour une pression de 0.6Kbar et celles du secteur (2) dans une gamme de température de 200-220°C et de pression comprise entre 0.6 et 1.1 Kba. L’activité de la faille de Point-Vert a été datée par la méthode 40Ar/39Ar au Miocène inférieur (21 Ma). Ces failles sont interprétées comme associées aux premiers stades du soulèvement résultant de l’activité des chevauchements dans le socle sous-jacent.Deux types principaux de roches de failles caractérisent les failles étudiées. Les brèches dilatantes sont majoritaires dans les zones de failles du secteur (1) alors que les arkoses foliées sont majoritaires dans les zones de failles du secteur (2). Les brèches dilatantes témoignent de mécanismes de déformation dominés par la fracturation transgranulaire et la pression-solution des silicates. Ce dernier mécanisme se manifeste principalement par d’abondantes précipitations cycliques de quartz, les stylolites restant peu développés. Les géométries structurales sont associées à l’activation de plans T de Riedel déterminant l’ouverture de relais extensifs et un régime localement dilatant. Nous associons ce type de roche de faille à une faible pression effective au cours de la déformation.La déformation cisaillante exprimée dans les arkoses foliées témoigne de mécanismes de déformation dominés par (i) la fracturation intragranulaire et transgranulaire, (ii) la pressionsolution/ précipitation des silicates, principalement le quartz, (iii) la néoformation de micas blancs liée à l’altération des feldspaths et (iv) la précipitation de chlorite. Ce travail montre également que les transformations minéralogiques liées aux interactions fluide-roche dans la zone de faille (forte augmentation de la proportion des phyllosilicates au dépend des feldspaths) changent radicalementla composition minéralogique de la roche. Nous associons ce type de roche de faille à une forte pression effective au cours de la déformation.La pétrophysique montre que les brèches de failles (secteur 1) ont une perméabilité isotrope et équivalente à celle du protolithe (10-3mD sous 2 MPa de confinement) tandis que les roches foliées (secteur 2) montrent une augmentation de perméabilité (10-2mD) selon l’axe Y de la déformation, d’un ordre de grandeur supérieure aux perméabilités suivant les axes X et Z et dans la roche hôte (10-3mD). Ce drain préférentiel potentiel est associé à l’orientation des phyllosilicates dans la foliation.
https://hal.archives-ouvertes.fr/tel-01310382

tel-01310382
https://hal.archives-ouvertes.fr/tel-01310382
https://hal.archives-ouvertes.fr/tel-01310382/document
https://hal.archives-ouvertes.fr/tel-01310382/file/Th%C3%A8seCAVAILHES2012.pdf

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Orogenic lherzolites exhibit a specific (although reproducible) platinum-group element signature characterized by slight positive deviations of Pd/Ir, Rh/Ir and Ru/Ir ratios from the canonical chondritic model. Such a signature was alternatively considered to be a compositional feature of the primitive upper mantle or resulting from sulfide melt addition by refertilisation reactions in the continental lithosphere. To shed additional light on this conundrum, the distribution of PGE in FON B 93, an unserpentinized, fertile (3.24% Al2O3) orogenic lherzolite (French Pyrenees) used as in-house standard by our group, has been studied to different scales, from the bulk rock to trace minerals. In addition to new ICPMS analyses after separation into Nis and Te coprecipitation, its whole-rock PGE concentrations were redetermined by three different laboratories using very precise ID-ICP-MS methods after digestion of the sample in Carius tube at T=250 degrees C and 320 degrees C or in high-pressure asher (HPA-S). The four methods produce reproducible Ru, Rh and Pd contents (7.1 +/- 0.18 ppb; 1.43 +/- 0.05 ppb; 7.1 +/- 0.30 ppb) whereas the non-ID NiS-fire assay method underestimates the Os and Ir concentrations by c.a. 10 and 15% compared to ID-ICP-MS analyses (4.40 +/- 0.07 and 4.00 +/- 0.17 ppb, respectively). Platinum was the most difficult to analyse. If performed on powder aliquots smaller than 3 g, the ID-ICP-MS analyses generate strong nugget effects while the non-ID NiS-fire assay method yields statistically lower (but highly reproducible) Pt concentrations (6.92 +/- 0.26 ppb). These features reflect the strong partitioning of Pt into trace phases that SEM and laser ablation-ICP-MS analyses on thin sections identify as both high-temperature Pt-Ir-Os alloys and Pt-(Pd) tellurides of likely subsolidus origin; ten to fifteen grains ranging in maximum dimension from a few micrometres to a few hundreds of nanometers, were identified by standard polished thin section. LA-ICP-MS data on base metal sulfides (25 grains analysed), coupled with the whole-rock S concentration (277 +/- 10 ppm) and modal composition of the BMS (90% pentlandite+accessory pyrite and secondary pyrrhotite + 10% chalcopyrite) allowed the contribution of the BMS phase to the PGE budget of FON B 93 to be estimated. Except Pt that exhibits a 95% deficit in the BMS phase, the PGE concentrations measured by ID-ICP-MS can be balanced by BMS while Al-spinel is a negligible contributor, accounting for less than 0.5% of the Ru budget. The occurrence of Pt in trace phases may bias the whole-rock Pt concentrations because 1) mechanical collection of Pt-rich trace phases remains problematic with the Nis button, and 2) Pt-Ir-Os alloys may be prone to digestion problems in conventional Carius tube procedures. Since they could be stable at mantle depth, such refractory alloys that contain Os and Ir may also have enhanced the heavy PGEs/light PGEs fractionation. Our observations likely pertain to orogenic lherzolites as a whole because BMS assemblages in these mantle rocks record evolution at low sulfur fugacity, which prevents Pt-Ir-Os alloy from entering the Mss in the mantle; moreover, at subsolidus temperature, pentlandite, the major BMS, cannot accommodate 0 valence state Pt.
ISSN: 0009-2541

hal-00411486
https://hal.archives-ouvertes.fr/hal-00411486
DOI : 10.1016/j.chemgeo.2007.06.030

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Analogue and numerical models have shown that the strength of the lithospheric mantle controls the mode of lithosphere deformation. In extension, the presence or absence of a high strength brittle mantle respectively leads to localized or distributed rifting. However, first order geophysical data question the existence of such a brittle mantle. Here we use 2-D finite-element large strain modelling to quantify the impact of a ductile localizing mantle - instead of brittle - in triggering continental rifting. As a novelty, the mantle rheology considers the effect of grain boundary sliding during strain-induced grain size reduction, which may promote a significant strength drop and subsequent strain localization at low mantle temperature (< 700-800 °C). Our results reveal that such ductile localizing mantle implies varying modes of continental rifting that mainly depend on both the amount of weakening in the ductile mantle and the strength of the lower ductile crust. A medium to strong lower crust implies coupling between the upper crust and ductile localizing mantle, yielding to narrow continental rifting. In contrast, a weak lower crust implies decoupling between the upper crust and ductile localizing mantle, giving rise to a switch from distributed faulting at incipient strain to localized faulting at large strain. Ductile strain localization in the lithospheric mantle is therefore sufficient to trigger continental rifting, although a critical amount of weakening is required. Such ductile localizing mantle provides a relevant geological and mechanical alternative to the brittle mantle. It moreover provides a wider variety of modes of upper crustal faulting that are commonly observed in nature.
ISSN: 0040-1951

Droits : info:eu-repo/semantics/OpenAccess
insu-00924254
https://hal-insu.archives-ouvertes.fr/insu-00924254
https://hal-insu.archives-ouvertes.fr/insu-00924254/document
https://hal-insu.archives-ouvertes.fr/insu-00924254/file/Gueydan_precigout_2014_Tectonophysics.pdf
DOI : 10.1016/j.tecto.2013.11.029

Éditeur(s) : HAL CCSD Elsevier Masson
Résumé : In French Guiana, the population growth will result in an increase in demand for agricultural products and thus, will lead to an increase in the amount of tropical forests converted into cropland or pasture. Impacts of different agricultural systems on greenhouse gas (GHG) fluxes have not been studied in French Guiana. In this context, the fire-free chop-and-mulch method was used to convert a tropical forest site to agriculture. This study focused on soil nitrous oxide (N2O) emissions and we compared four land uses: (1) the undisturbed tropical forest, (2) recently converted grassland and recently converted croplands (fertilized soybean/maize rotation) with either (3) disk tillage or (4) no tillage.N2O measurements were obtained through the chamber technique and conducted over a 1-year period (measurements began 19 months after the forest was cleared). N2O fluxes were related to soil parameters measured at each sampling date: nitrate and ammonium contents, gravimetric water content (GWC) and temperature.Through the entire period, the mean (±standard error) and median N2O fluxes were 3.8 ± 0.5 and 2.7 g N ha−1 day−1, respectively for undisturbed tropical forest and 2.4 ± 0.9 and 0.8 g N ha−1 day−1, respectively for grassland (mowed Brachiaria ruziziensis). For croplands, no significant difference was found for N2O emissions between both agricultural practices. The mean (±standard error) and median N2O fluxes were 8.5 ± 1.2 and 4.0 g N ha−1 day−1, respectively for disk tillage plots and 8.5 ± 1.3 and 3.6 g N ha−1 day−1, respectively for no tillage plots. Nitrogen inputs (due to the application of fertilizer or due to the mineralization of crop residues) led to higher N2O fluxes, resulting in significantly higher mean N2O emissions from croplands compared to the forest, when only considering land use effect on N2O fluxes in a statistical model. The soil nitrate content, GWC and temperature had a significant positive effect on N2O fluxes. Taking into account these soil parameters in another statistical model, N2O emissions from croplands were not higher than the natural N2O emissions from tropical forest soils. Our results suggest that, if more forest will have to be converted in the course of the expected population growth in French Guiana, it could have low impact on the soil N2O fluxes (similar to natural fluxes from forest) with the improving of farming techniques (for example modification of the splitting of N-fertilizer) in the cropping plots.
ISSN: 0167-8809

hal-01204228
https://hal.archives-ouvertes.fr/hal-01204228
DOI : 10.1016/j.agee.2015.04.004
PRODINRA : 307607

Éditeur(s) : HAL CCSD Royal Society
Résumé : Coral bleaching events are predicted to occur more frequently in the coming decades with global warming. The susceptibility of corals to bleaching during thermal stress episodes depends on many factors, including the magnitude of thermal stress and irradiance. The interactions among these two factors, and in particular with ultra-violet radiation (UVR), the most harmful component of light, are more complex than assumed, and are not yet well understood. This paper explores the individual and combined effects of temperature and UVR on the metabolism of Acropora muricata, one of the most abundant coral species worldwide. Particulate and dissolved organic matter (POM/DOM) fluxes and organic matter (OM) degradation by the mucus-associated bacteria were also monitored in all conditions. The results show that UVR exposure exacerbated the temperature-induced bleaching, but did not affect OM fluxes, which were only altered by seawater warming. Temperature increase induced a shift from POM release and DOM uptake in healthy corals to POM uptake and DOM release in stressed ones. POM uptake was linked to a significant grazing of pico- and nanoplankton particles during the incubation, to fulfil the energetic requirements of A. muricata in the absence of autotrophy. Finally, OM degradation by mucus-associated bacterial activity was unaffected by UVR exposure, but significantly increased under high temperature. Altogether, our results demonstrate that seawater warming and UVR not only affect coral physiology, but also the way corals interact with the surrounding seawater, with potential consequences for coral reef biogeochemical cycles and food webs.
ISSN: 2046-6390

hal-01606454
https://hal.archives-ouvertes.fr/hal-01606454
DOI : 10.1242/bio.026757
PRODINRA : 406580
PUBMED : 28811302

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : International audience
Cnidarian-dinoflagellate symbiosis disruption and subsequent bleaching are major concerns, especially regarding their ecological consequences on coral reefs and temperate coralligenous communities. Cnidarian bleaching is caused by a variety of environmental stressors, such as elevated seawater temperature associated with global climate change, and by pollutants, such as herbicides and metals. Several cellular events have been described to explain symbiosis dysfunction and bleaching. Excess or damaged Symbiodinium symbionts are removed through a variety of mechanisms, including exocytosis, apoptosis, necrosis and autophagy. However, few studies have compared in the same species the relative involvement of these mechanisms, according to the stress inducing the bleaching. In this study, we used two different treatments —temperature and menthol— to induce bleaching in the sea anemone Anemonia viridis. By monitoring the ultrastructural tissue modifications, in control specimens we observed a basal rate of in situ symbiont digestion —or symbiophagy— induced by starvation. Symbiophagy was strongly induced in menthol-treated specimens and was the main cellular process of bleaching, whereas apoptosis and necrosis predominated in hyperthermal-induced bleaching. These results suggested a host effect through autophagy in menthol-treated specimens. These observations also suggested that symbiont removal may result from reengagement of the phagosomal maturation process in the host. These overall data demonstrate that several Symbiodinium cell removal mechanisms coexist and that stressors can activate one or more of these pathways, depending on the stress type, intensity or duration.
ISSN: 0334-5114

hal-01546908
http://hal.upmc.fr/hal-01546908
DOI : 10.1007/s13199-016-0406-y