Éditeur(s) : Elsevier Sci Ltd
Résumé : Several marine geophysical data and piston-coring surveys acquired during the last decade allow one to better understand the close dynamic interactions between the sand-rich Orinoco turbidite system and the compressional structures of the Barbados prism. These interactions have been active since Eocene time as illustrated by the study of outcrops onshore Barbados Island. Because of strong morphologic and tectonic control in the east-Caribbean active margin, the present-day Orinoco turbiditic pattern system does not exhibit a classic fan geometry. The sea-floor geometry between the slope of the front of the Barbados prism and the slope of the South-American margin induces the convergence of the turbidite channels toward the abyssal plain, at the front of the accretionary prism. Also, whereas in most passive margins the turbidite systems are organized upstream to downstream as canyon, channel-levee and lobes, here, due to the tectonic control, the sedimentary system is organized upstream to downstream as channel-levee, canyons and channelized lobes. Indeed, at the edge of the Orinoco platform, the system has multiple sources with several distributaries and downstream the channel courses are complex with frequent convergences or divergences that are emphasized by the effects of the undulating seafloor tectonic morphologies associated with active thrust tectonics and mud volcanism. On top of the accretionary prism, turbidite sediments are filling transported piggy-back basins whose timing of sedimentation vs. deformation is complex. While erosion processes are almost absent on the highly subsiding Orinoco platform and in the upper part of the turbidite system, they develop mostly between 2000 and 4000 m of water depth, above the compressional structures of the Barbados prism (canyons up to 3 km wide and 300 m deep). In the abyssal plain, the main turbiditic channel develops toward the east and connects with the Vidal mid-Atlantic channel. The sediments transported in this channel are filling several elongated basins linked with fracture zones (notably the Barracuda Basin), and finally end their course in the Puerto-Rico trench, the deepest morphologic depression of the region. Piston-cores have demonstrated that turbidite sediments above the accretionary prism and in the abyssal plain are mostly coarse sandy deposits covered by recent pelagic planktonic-rich sediments, which corresponds to slower sand deposition during the post-glacial sea level rise. Numerical stratigraphic modelling suggests that during the last glacial event, the main depocentres were located above the tectonic prism and in the abyssal plain, at the front of the prism and that, during the Holocene eustatic rise, a large accommodation space formed on the shelf confining sedimentation mostly on the Orinoco deltaic platform and producing a starvation downstream in the turbidite system.
Marine And Petroleum Geology (0264-8172) (Elsevier Sci Ltd), 2015-06 , Vol. 64 , P. 76-103

Droits : 2015 Elsevier Ltd. All rights reserved.
http://archimer.ifremer.fr/doc/00252/36373/34913.pdf
DOI:10.1016/j.marpetgeo.2014.12.015
http://archimer.ifremer.fr/doc/00252/36373/

Éditeur(s) : HAL CCSD Coastal Education and Research Foundation, Inc.
Résumé : International audience
Morphodynamics of sandy, macrotidal, embayed beaches is complex because of the numerous physical processes interacting at the same location over a wide range of temporal scales. As most of these processes are controlled by beach morphology, dynamic feedbacks are generally observed between hydro- and morphodynamics. Investigating short-term processes is essential in order to improve long term morphological prediction. A key question is to understand how beach slope reacts to forcing conditions, in particular the response time of the beach profile, how long the transient state lasts. This study deals with the spatial and temporal responses of beach morphology to varying incident conditions. Here we report main observations, preliminary results and on-going investigations on the DYNATREZ1 field campaign, which was conducted in the framework of the National Observation Service Dynalit. Beach profiles are shown to adapt rapidly to forcing conditions, within two days, with more intense variations observed in the high tide swash zone. The presence of infragravity waves and their dissipation on the beach is highlighted. It is likely that the very large variability in beach slope observed over a single neapspring cycle is responsible for the accordingly large variability in wave skewness, asymmetry and breaking processes, and thus in sediment fluxes and morphological changes.
ICS 2016 Sydney
Sydney, Australia

hal-01254465
https://hal.archives-ouvertes.fr/hal-01254465
DOI : 10.2112/SI75-075.1

Éditeur(s) : Scientific Technical Research Council Turkey-tubitak
Résumé : In 2002, the Bosphorus outlet was mapped using an EM 300 multibeam echo-sounder together with a Chirp sonar system. This survey, carried out on board the Ifremer RV 'Le Suroit' in the frame of the BlaSON project, completes the data previously acquired directly at the mouth of the Bosphorus by Di Iorio et al. (1999) in the frame of a NATO SACLANT Undersea Research project using jointly the NATO RV Alliance, and the Turkish Navy Survey ship 'Cubuklu'. This acoustic imaging has identified a canyon system at the slope and a shallow marine fan, which contains shelf incisions extending the Istanbul Strait incision. Multibeam bathymetry, ultra-high resolution seismic profiling and coring correlations on this subaqueous fan area allowed reconstruction of morphology and patterns of sediment distribution indicative of high energy sediment transport processes. The discovery of a shallow water/shelf type fan directly off shore from the Bosphorus and connected to its outlet is consistent with the theories of sudden discharges of large volumes of water. Age dating obtained at the bottom of this subaqueous shelf fan yielded an age of 6700 yr C-14 BP (uncorrected age) for the first marine mollusc encountered at the base. This is in accordance with a last and abrupt reconnection of the Marmara Sea to the Black Sea. A detailed morphological map of the shelf and slope along with seismic profile interpretation and core correlation is presented here. A synthesis is proposed to explain the formation of this subaqueous fan and its relationship with the last connection between Black and Marmara seas aft er the Last Glacial Maximum. This interpretation can be summarized as follows: stage A corresponds to the first erosion surface seen on the shelf related to the Last Glacial Maximum low stand; stage B is the ravine surface onlapping to ca. -30, -40 m; stage C is a second erosional surface related to a sea level fall and eroding most of underlying Unit 1B; and stage D corresponds to the onset of the fan deposit during a period of high water run-off from the Black Sea entering from the Bosphorus. Avulsion branches show that this fan has been active for a long time.
Turkish Journal Of Earth Sciences (1300-0985) (Scientific Technical Research Council Turkey-tubitak), 2011 , Vol. 20 , N. 3 , P. 287-305

Droits : 2011 TÜBİTAK
http://archimer.ifremer.fr/doc/00036/14676/13677.pdf
http://archimer.ifremer.fr/doc/00036/14676/

Éditeur(s) : Elsevier
Résumé : The family Kareniaceae is mostly known in France for recurrent blooms of Karenia mikimotoi in the Atlantic, English Channel, and Mediterranean Sea and for the unusual green discoloration in the saltwater lagoon of Diana (Corsica) caused by Karlodinium corsicum in April 1994. In terms of diversity, this taxonomic group was long overlooked owing to the difficult identification of these small unarmored dinoflagellates. In this study, thanks to the molecular characterization performed on single cells from field samples and cultures, twelve taxonomic units were assigned to the known genera Karenia, Karlodinium and Takayama, whereas one could not be affiliated to any described genus. The molecular phylogeny inferred from the D1–D2 region of the LSU rDNA showed that five of them formed a sister taxon of a known species, and could not be identified at species-level, on the basis of molecular analysis only. Among these latter taxa, one Karlodinium which was successfully cultured was investigated by studying the external morphological features (using two procedures for cells fixation), ultrastructure, pigment composition, and haemolytic activity. The results of our analyses corroborate the genetic results in favour of the erection of Karlodinium gentienii sp. nov., which possesses an internal complex system of trichocysts connected to external micro-processes particularly abundant in the epicone, and a peculiar pigment composition. In addition, preliminary assays showed a haemolytic activity.
Harmful Algae (1568-9883) (Elsevier), 2014-12 , Vol. 40 , P. 75-91

Droits : 2014 Elsevier B.V. All rights reserved.
http://archimer.ifremer.fr/doc/00225/33611/32310.pdf
DOI:10.1016/j.hal.2014.10.006
http://archimer.ifremer.fr/doc/00225/33611/

Éditeur(s) : HAL CCSD
Résumé : International audience
As subducting plates reach the base of the upper mantle, some appear to flatten and stagnate, while others seemingly go through unimpeded. This variable resistance to slab sinking has been proposed to affect long-term thermal and chemical mantle circulation. A review of observational constraints and dynamic models highlights that neither the increase in viscosity between upper and lower mantle (likely by a factor 20–50) nor the coincident endothermic phase transition in the main mantle silicates (with a likely Clapeyron slope of –1 to –2 MPa/K) suffice to stagnate slabs. However, together the two provide enough resistance to temporarily stagnate subducting plates, if they subduct accompanied by significant trench retreat. Older, stronger plates are more capable of inducing trench retreat, explaining why backarc spreading and flat slabs tend to be associated with old-plate subduction. Slab viscosities that are ∼2 orders of magnitude higher than background mantle (effective yield stresses of 100–300 MPa) lead to similar styles of deformation as those revealed by seismic tomography and slab earthquakes. None of the current transition-zone slabs seem to have stagnated there more than 60 m.y. Since modeled slab destabilization takes more than 100 m.y., lower-mantle entry is apparently usually triggered (e.g., by changes in plate buoyancy). Many of the complex morphologies of lower-mantle slabs can be the result of sinking and subsequent deformation of originally stagnated slabs, which can retain flat morphologies in the top of the lower mantle, fold as they sink deeper, and eventually form bulky shapes in the deep mantle.
ISSN: 1553-040X

hal-01571965
https://hal.archives-ouvertes.fr/hal-01571965
DOI : 10.1130/GES01476.1

Éditeur(s) : HAL CCSD Botanical Society of America
Résumé :  
To investigate the existence of coordinated sets of seedling traits adapted to contrasting establishment conditions, we examined evolutionary convergence in seedling traits for 299 French Guianan woody plant species and the stress response in a shadehouse of species representing seed size gradients within five major cotyledon morphology types. The French Guianan woody plant community has larger seeds than other tropical forest communities and the largest proportion of hypogeal cotyledon type (59.2%) reported for tropical forests. Yet the community includes many species with intermediate size seeds that produce seedlings with different cotyledonal morphologies. A split-plot factorial design with two light levels (0.8% and 16.1% PAR) and four damage treatments (control, seed damage, leaf damage, stem damage) was used in the shadehouse experiment. Although larger-seeded species had higher survival and slower growth, these patterns were better explained by cotyledon type than by seed mass. Even larger-seeded species with foliar cotyledons grew faster than species with reserve-type cotyledons, and survival after stem grazing was five times higher in seedlings with hypogeal cotyledons than with epigeal cotyledons. Thus, to predict seedling performance using seed size, seedling morphology must also be considered.
ISSN: 0002-9122

hal-01032177
https://hal.archives-ouvertes.fr/hal-01032177
DOI : 10.3732/ajb.94.6.901

Éditeur(s) : HAL CCSD Biopress Limited
Résumé : International audience
Obligately epizoic diatoms (Bacillariophyta) on vertebrates were first described from cetaceans, but turtles, both freshwater and marine, also host very specific floras. Several scrapings of juvenile Chelonia mydas have allowed the description of two new diatom taxa whose valves are asymmetrical about the transapical axis, Tripterion societatis sp. nov. and Chelonicola caribeana sp. nov. These taxa are very small and show some morphological plasticity. Such plasticity might suggest their inclusion in genera with slightly different characteristics from Tripterion and Chelonicola as originally delimited. Based on our observations, an emended diagnosis is proposed for Chelonicola.
ISSN: 2159-8347

hal-01500418
https://hal.archives-ouvertes.fr/hal-01500418
DOI : 10.1080/0269249X.2017.1299042

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
The Gulf of Cadiz lies astride the complex plate boundary between Africa and Eurasia west of the Betic-Rif mountain belt. We report on the results of recent bathymetric swathmapping and multi-channel seismic surveys carried out here. The seafloor is marked by contrasting morphological provinces, spanning the SW Iberian and NW Moroccan continental margins, abyssal plains and an elongate, arcuate, accretionary wedge. A wide variety of tectonic and gravitational processes appear to have shaped these structures. Active compressional deformation of the wedge is suggested by folding and thrusting of the frontal sedimentary layers as well as basal duplexing in deeper internal units. There is evidence for simultaneous gravitational spreading occurring upslope. The very shallow mean surface and basal slopes of the accretionary wedge (1° each) indicate a very weak decollement layer, geometrically similar to the Mediterranean Ridge accretionary complex. Locally steep slopes (up to 10°) indicate strongly focused, active deformation and potential gravitational instabilities. The unusual surface morphology of the upper accretionary wedge includes “raft-tectonics” type fissures and abundant sub-circular depressions. Dissolution and/or diapiric processes are proposed to be involved in the formation of these depressions.
ISSN: 0264-8172

insu-00401683
https://hal-insu.archives-ouvertes.fr/insu-00401683
DOI : 10.1016/j.marpetgeo.2007.11.008

Éditeur(s) : HAL CCSD
Résumé : The evolution of mountain belt piedmont is controlled by interactions between tectonics, erosion and sedimentation. To study coupling between these processes, we analyze morphometric data collected in the eastern Tian Shan piedmont (NW China) and develop a new analogue modelling technique. The modeling approach uses an experimental set-up and analog material specifically designed to study simultaneously tectonic structures (faults, folds), detailed morphology (drainage basins, channels, alluvial fans, etc.) and stratified sedimentation. Measurement techniques based on laser interferometry and image correlation are also developed to quantify the topographic and kinematic evolution of models.
Our experiments allow a new approach for the study of piedmont morphotectonic evolution. Our results indicate that tectonics mainly controls this evolution. The propagation of deformation and the formation of relief both significantly influence the development of drainage networks, the evolution of drainage basins and the formation of morphotectonic markers. Particularly, a study of alluvial fans and watershed metrics suggests that there is a dynamical equilibrium between uplift, erosion and morphology. In addition, our results show that terrace nucleation is controlled by thrust activity and hydrography adjustments. Folding of terraces responds to a homothetic deformation pattern.
This new methodology brings promising perspectives in the fields of geomorphology, seismotectonics and sedimentology.
L'évolution d'un piémont de chaîne de montagnes est contrôlée par les interactions entre la tectonique, l'érosion et la sédimentation. Pour étudier ces processus, nous avons analysé des données morphométriques issues des piémonts orientaux du Tian Shan (NW Chine) et développé un nouveau type de modélisation analogique. Cette approche utilise un dispositif et un matériau expérimental spécialement conçus pour modéliser simultanément des structures tectoniques (failles, plis), une morphologie détaillée (bassins versants, rivières, cônes alluviaux, etc.) et une sédimentation stratifiée. Des techniques de mesure optique ont été également mises en oeuvre afin de quantifier l'évolution topographique et cinématique des modèles.
Les expériences réalisées offrent une opportunité inédite d'étudier l'évolution morphotectonique d'un piémont. Nos résultats montrent que la tectonique exerce un contrôle de premier ordre sur cette évolution. La propagation de la déformation et la formation des reliefs influencent en effet significativement le développement du réseau de drainage, l'évolution des bassins versants et la formation des marqueurs morphotectoniques. En particulier, l'analyse de la morphométrie des cônes alluviaux et de leurs bassins versants suggère qu'un équilibre dynamique s'installe entre la surrection, l'érosion et la morphologie. Nos résultats montrent également que l'apparition des terrasses est guidée par l'activité des chevauchements et les adaptations de l'hydrographie. Leur modèle de plissement répond à une déformation homothétique.
Cette nouvelle approche ouvre des perspectives d'étude prometteuses en géomorphologie, sismotectonique et stratigraphie.
https://tel.archives-ouvertes.fr/tel-00339145

tel-00339145
https://tel.archives-ouvertes.fr/tel-00339145
https://tel.archives-ouvertes.fr/tel-00339145v2/document
https://tel.archives-ouvertes.fr/tel-00339145/file/These_Graveleau08.pdf

Éditeur(s) : HAL CCSD Wiley
Résumé : International audience
Microalgae in the division Haptophyta play key roles in the marine ecosystem and in global biogeochemical processes. Despite their ecological importance, knowledge on seasonal dynamics, community composition and abundance at the species level is limited due to their small cell size and few morphological features visible under the light microscope. Here, we present unique data on haptophyte seasonal diversity and dynamics from two annual cycles, with the taxonomic resolution and sampling depth obtained with high-throughput sequencing. From outer Oslofjorden, S Norway, nano- and picoplanktonic samples were collected monthly for 2years, and the haptophytes targeted by amplification of RNA/cDNA with Haptophyta-specific 18S rDNA V4 primers. We obtained 156 operational taxonomic units (OTUs), from c. 400.000 454 pyrosequencing reads, after rigorous bioinformatic filtering and clustering at 99.5%. Most OTUs represented uncultured and/or not yet 18S rDNA-sequenced species. Haptophyte OTU richness and community composition exhibited high temporal variation and significant yearly periodicity. Richness was highest in September-October (autumn) and lowest in April-May (spring). Some taxa were detected all year, such as Chrysochromulina simplex, Emiliania huxleyi and Phaeocystis cordata, whereas most calcifying coccolithophores only appeared from summer to early winter. We also revealed the seasonal dynamics of OTUs representing putative novel classes (clades HAP-3-5) or orders (clades D, E, F). Season, light and temperature accounted for 29% of the variation in OTU composition. Residual variation may be related to biotic factors, such as competition and viral infection. This study provides new, in-depth knowledge on seasonal diversity and dynamics of haptophytes in North Atlantic coastal waters. See also the Perspective by Massana
ISSN: 0962-1083

hal-01545321
https://hal.archives-ouvertes.fr/hal-01545321
DOI : 10.1111/mec.13160

Éditeur(s) : Springer
Résumé : The Golo Margin in eastern Corsica is dissected by four canyons and two gullies which fed turbidite systems. Study of the dispersal of surficial sediments and flow dynamic in the Golo system is based on Kullenberg and interface cores interpreted in relation to a previously published seismic dataset. Cores were described in detail and interpreted within a sedimentary and stratigraphic framework. During the last 42,000 years, gravity processes which occurred in the large systems with a canyon source were mainly slide-induced, differentiated turbulent surges and hyperpycnal flows. Processes occurring in the small system with a gully source are mainly hyperconcentrated and concentrated flows. Deposits from the Corsican Margin can intercalate with products of processes triggered on the Pianosa Ridge located in the eastern part of the basin. During relative sea-level lowstands or during periods of rapid or high-amplitude sea-level fall, only large canyons (South and North Golo) are supplied by carbonate-rich hyperconcentrated and concentrated flows which are channelled in incised valleys on the shelf. During periods of slow or low-amplitude sea-level fall and during sea-level rise, sediments are trapped on a shelf delta and intensely winnowed by shelf hydrodynamic processes. Sand-rich hyperconcentrated and concentrated flows occur. All the systems fed by a canyon are active simultaneously. Gullies form and are active only during periods of sea-level rise. During relative highstands of sea level (Holocene), all the system is draped by hemipelagic sediments. Relative sea-level changes and canyon location relative to river mouths have a strong influence on the nature of sediment input, and the initiation and type of gravity flows which, in turn, control morphology and geometry.
Geo-Marine Letters (0276-0460) (Springer), 2006-12 , Vol. 26 , N. 6 , P. 373-395

Droits : 2006 Springer
http://archimer.ifremer.fr/doc/2006/publication-3594.pdf
DOI:10.1007/s00367-006-0045-z
http://archimer.ifremer.fr/doc/00000/3594/

Éditeur(s) : HAL CCSD Oxford University Press (OUP)
Résumé : International audience
Are bisphenol A (BPA) and BPA analogs (BPA-A) safe for male human reproductive function? The endocrine function of human testes explants [assessed by measuring testosterone and insulin-like factor 3 (INSL3)] was impacted by exposure of the human adult testis explants to BPA/BPA-A. The few epidemiologic studies performed suggest that bisphenols have potential endocrine disruptive properties, but they did not identify clear and direct patterns of endocrine disruption. Adult human testis explants in culture were exposed to BPA and the analogs bisphenol F (BPF), bisphenol S (BPS), bisphenol E (BPE), bisphenol B (BPB) and bisphenol A diglycidyl ether (BADGE) at 10(-9)-10(-5) M for 24 or 48 h. Human adult testes were obtained from prostate cancer patients who had no hormone therapy, or from multiorgan donors. After ex vivo exposure to the investigated bisphenols, the measured outcomes were related to histopathology (gross morphology and germ cell viability determined by anti-caspase three immunohistochemistry), and the levels of testosterone, INSL3 and inhibin B were measured using immunoassays. The levels of mRNA encoding key enzymes of bisphenol biotransformation were investigated by quantitative PCR: UGT2B15 UDP (glucuronosyltransferase two family, polypeptide B15), GUSB (glucuronidase beta), SULT1A1 and 3 (sulfotransferase family 1 A member 1 and 3) and STS (steroid sulfatase). A significant dose-dependent inhibition was found between testosterone levels measured in the culture medium and concentrations of BPA (P = 0.00778 at 24 h and P = 0.0291 at 48 h), BPE (P = 0.039) and BPF (P = 0.00663). The observed BPA and BPA-A-induced inhibition of testosterone production varied according to duration of exposure and BPA/BPA-A concentrations. BPA (10(-9) M; P < 0.05), BPB (10(-9) M; P < 0.05), BPS (10(-9) and 10(-8) M; P < 0.05) and BADGE (10(-5) M; P < 0.05) increased Leydig cell INSL3 production. By contrast, BPE dose dependently inhibited INSL3 (P = 0.0372). Conversely, Sertoli cell function (inhibin B) and germ cell viability were not significantly affected by either bisphenols. N/A. Environmental compounds cannot be deliberately administered to men, justifying the use of an ex vivo approach. A relatively low number of testes samples were available for analysis (n = 3, except for testosterone secretion with n = 5). The active concentrations of BPA and BPA-A used in the study were higher than those found in human biological fluids. Under our experimental conditions, direct exposure to BPA or BPA-A can result in endocrine disturbance in the adult human testis.
ISSN: 0268-1161

hal-01578582
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01578582
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01578582/document
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01578582/file/Parallel%20assessment%20of%20the%20effects%20of%20bisphenol%20A_accepted.pdf
DOI : 10.1093/humrep/dex093

Éditeur(s) : HAL CCSD Public Library of Science
Résumé : International audience
We assessed the occurrence of algae in five species of tank-bromeliads found in contrasting environmental sites in a Neotropical, primary rainforest around the Nouragues Research Station, French Guiana. The distributions of both algal abundance and biomass were examined based on physical parameters, the morphological characteristics of bromeliad species and with regard to the structure of other aquatic microbial communities held in the tanks. Algae were retrieved in all of the bromeliad species with mean densities ranging from ∼10(2) to 10(4) cells/mL. Their biomass was positively correlated to light exposure and bacterial biomass. Algae represented a tiny component of the detrital food web in shaded bromeliads but accounted for up to 30 percent of the living microbial carbon in the tanks of Catopsis berteroniana, located in a highly exposed area. Thus, while nutrient supplies are believed to originate from wind-borne particles and trapped insects (i.e., allochtonous organic matter), our results indicate that primary producers (i.e., autochtonous organic matter) are present in this insectivorous bromeliad. Using a 24-h incubation of size-fractionated and manipulated samples from this plant, we evaluated the impact of mosquito foraging on algae, other microorganisms and rotifers. The prey assemblages were greatly altered by the predation of mosquito larvae. Grazing losses indicated that the dominant algal taxon, Bumilleriopsis sp., like protozoa and rotifers, is a significant part of the diet of mosquito larvae. We conclude that algae are a relevant functional community of the aquatic food web in C. berteroniana and might form the basis of a complementary non-detrital food web.
ISSN: 1932-6203

hal-00819161
https://hal.archives-ouvertes.fr/hal-00819161
https://hal.archives-ouvertes.fr/hal-00819161/document
https://hal.archives-ouvertes.fr/hal-00819161/file/Brouard2011_AreAlgae.pdf
DOI : 10.1371/journal.pone.0020129

Éditeur(s) : HAL CCSD Czech Phycological Society
Résumé : International audience
As first observed on a group of taxa related to Cocconeis peltoides Hustedt, several other Cocconeis eHRenbeRG (Bacillariophyta) taxa possess a row of minute marginal pores on the external side of their sternum valve (SV) connected to small and simple internal portules, or processes. These processes are often located in continuity with the striae, but can also be slightly shifted or distant from the distal areola of the striae. The row of pores is often, but not always, externally separated from the stria by a crista marginalis. Within Cocconeis, and possibly all raphid diatoms, these processes seem unique and restricted to a few taxa. A list is presented of the taxa pertaining (or close) to Cocconeis that are actually known to share these micro–structures. In addition, the morphological variability of the processes is described in detail and a morphological comparison of the taxa is provided. The characteristic features of taxa showing a row of SV processes permit the tentative definition of several morphological groups. It is difficult to prove the taxonomic affiliation of these taxa and demonstrate or refute that these processes are ancestral characters. Some of these taxa are rare and restricted to low latitudes (e.g., tropical taxa) while others are frequent and ubiquitous. Abbreviations: (LM) light microscope, (SEM) scanning electron microscope, (RV) raphe valve, (SV) sternum valve, (RVVC) raphe valve valvocopula, (SVVC) sternum valve valvocopula
ISSN: 1802-5439

hal-01212883
https://hal-univ-perp.archives-ouvertes.fr/hal-01212883
https://hal-univ-perp.archives-ouvertes.fr/hal-01212883/document
https://hal-univ-perp.archives-ouvertes.fr/hal-01212883/file/fottea_fot-201502-0003.pdf
DOI : 10.5507/fot.2015.015

Éditeur(s) : Public Library Science
Résumé : Background: The Astrophorida (Porifera, Demospongiae(rho)) is geographically and bathymetrically widely distributed. Systema Porifera currently includes five families in this order: Ancorinidae, Calthropellidae, Geodiidae, Pachastrellidae and Thrombidae. To date, molecular phylogenetic studies including Astrophorida species are scarce and offer limited sampling. Phylogenetic relationships within this order are therefore for the most part unknown and hypotheses based on morphology largely untested. Astrophorida taxa have very diverse spicule sets that make them a model of choice to investigate spicule evolution. Methodology/Principal Findings: With a sampling of 153 specimens (9 families, 29 genera, 89 species) covering the deep- and shallow-waters worldwide, this work presents the first comprehensive molecular phylogeny of the Astrophorida, using a cytochrome c oxidase subunit I (COI) gene partial sequence and the 59 end terminal part of the 28S rDNA gene (C1-D2 domains). The resulting tree suggested that i) the Astrophorida included some lithistid families and some Alectonidae species, ii) the sub-orders Euastrophorida and Streptosclerophorida were both polyphyletic, iii) the Geodiidae, the Ancorinidae and the Pachastrellidae were not monophyletic, iv) the Calthropellidae was part of the Geodiidae clade (Calthropella at least), and finally that v) many genera were polyphyletic (Ecionemia, Erylus, Poecillastra, Penares, Rhabdastrella, Stelletta and Vulcanella). Conclusion: The Astrophorida is a larger order than previously considered, comprising ca. 820 species. Based on these results, we propose new classifications for the Astrophorida using both the classical rank-based nomenclature (i.e., Linnaean classification) and the phylogenetic nomenclature following the PhyloCode, independent of taxonomic rank. A key to the Astrophorida families, sub-families and genera incertae sedis is also included. Incongruences between our molecular tree and the current classification can be explained by the banality of convergent evolution and secondary loss in spicule evolution. These processes have taken place many times, in all the major clades, for megascleres and microscleres.
Plos One (1932-6203) (Public Library Science), 2011-04 , Vol. 6 , N. 4 , P. -

Droits : 2011 Ca´rdenas et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
http://archimer.ifremer.fr/doc/00137/24817/22903.pdf
DOI:10.1371/journal.pone.0018318
http://archimer.ifremer.fr/doc/00137/24817/

Éditeur(s) : HAL CCSD American Geophysical Union
Résumé : International audience
This study describes a laboratory experiment on rip current circulations over a moveable bed. Rip current characteristics over eight contrasting nature-like beach morphologies are investigated. The seabed varied from reasonably alongshore uniform to strongly alongshore nonuniform with crescentic patterns and bar-rip morphologies, representative of a full morphological down-state sequence. The same offshore shore-normal waves were generated by the wavemaker for the eight situations with the same mean water level to study the sensitivity of rip current characteristics as a function of the beach morphology only. In each case, a 30 to 60 min video run was used to track a large number of drifters released within the surf zone. Results show the presence of classic rip current patterns with counterrotating cells and a relatively narrow offshore-directed jet varying from shore-normal to strongly skewed. Wave-driven circulations were strongly unstable. Computed standard deviations of flow intensity and direction provide high-resolution information on the spatial variability of rip current instabilities. Highly pulsating and weakly directionally variable offshore-directed flow is observed in the rip neck for well-developed bar-rip morphologies that turns into a weakly pulsating and highly directional variable rip current flow with decreasing beach alongshore nonuniformity. Proposing a definition of rip current intensity based on the rip current circulation geometry, rip current intensity was found to linearly increase with increasing measure of beach alongshore nonuniformity within both the low-energy and moderate-energy rip current regimes. To date, our laboratory experiment provides the first extensive quantitative rip current information during a full down-state sequence for a given wave condition.
ISSN: 0148-0227

hal-00602920
https://hal.archives-ouvertes.fr/hal-00602920
DOI : 10.1029/2010JC006343

Éditeur(s) : HAL CCSD
Résumé : During the course of their life cycle organisms are exposed to natural environment variations capable of inducing physiological, morphological and behaviour changes, thus a phenotypic plasticity. Phenotypic plasticity is the ability of a genotype to generate a new phenotype following exogeneous or endogeneous stress. Here, we investigated the phenotypic plasticity of the non-calcifying symbiotic cnidarian Anemonia viridis at multiple levels of structural complexity, in vivo and in vitro. In vivo, we determined the mechanisms behind the phenotypic plasticity under expected future climate change (i.e. ocean acidification and ocean warming). Our results show physiological changes in the inorganic carbon use of the sea anemone A. viridis exposed to high pCO2 during a long-term stress in natura or a short-term stress in controlled conditions. We then observed an equivalent decrease in carbonic anhydrase activity, a key enzyme of cnidarian carbon concentrating mechanisms. Also, we demonstrated that an increase in seawater temperature modified the response observed during a high pCO2 scenario. In vitro, we established a viable primary cell culture from regenerating tentacles of A. viridis. We determined the gastrodermal tissue origin of the cultivated cells and validated the use of this new tool to the in vitro study of stress response at the cellular level. The set-up of this powerful in vitro tool will open a multitude of perspectives for the study of cellular responses to exogeneous stress (as global change perturbations) and to endogeneous stress (as the symbiosis constraints experienced by symbiotic cnidarians)
Durant leur cycle de vie, les organismes sont exposés à des variations environnementales capables d'induire des changements physiologiques, morphologiques et comportementaux, résultant d’une plasticité phénotypique. La plasticité phénotypique est la capacité d'un génotype à générer un nouveau phénotype suite à un stress. Ici, nous avons étudié la plasticité phénotypique d’un Cnidaire symbiotique et non-calcifiant, l’anémone de mer Anemonia viridis, à de multiples niveaux de complexité structurale, in vivo et in vitro. In vivo, nous avons identifié les mécanismes sous-jacents de la plasticité phénotypique potentiellement induits par les futurs changements climatiques (acidification et réchauffement des océans). Nos résultats montrent des modifications dans l'utilisation du carbone inorganique par A. viridis exposée à une forte pCO2 lors d’un stress chronique in natura ou lors d’un stress court en conditions contrôlées. Nous avons ainsi observé une diminution des activités anhydrase carbonique, une enzyme clé des mécanismes de concentration du carbone chez les Cnidaires. Nous avons aussi démontré que l'augmentation concomittante de la température modifie la réponse observée lors d'une élévation seule de la pCO2. In vitro, nous avons établi une culture de cellules primaires viables issue de tentacules d’A. viridis en régénération. Nous avons déterminé l'origine gastrodermale des cellules cultivées et validé l'utilisation de ce nouvel outil pour l'étude de la réponse au stress au niveau cellulaire. Ce nouvel outil ouvre une multitude de perspectives pour l'étude des réponses cellulaires aux stress exogènes (changement climatique) et endogènes (contraintes dues à la symbiose)
https://tel.archives-ouvertes.fr/tel-01674220

Droits : info:eu-repo/semantics/OpenAccess
NNT : 2016AZUR4136
tel-01674220
https://tel.archives-ouvertes.fr/tel-01674220
https://tel.archives-ouvertes.fr/tel-01674220/document
https://tel.archives-ouvertes.fr/tel-01674220/file/2016AZUR4136.pdf

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Tectonically controlled landforms develop morphologic features that provide useful markers to investigate crustal deformation and relief growth dynamics. In this paper, we present results of morphotectonic experiments obtained with an innovative approach combining tectonic and surface processes (erosion, transport, and sedimentation), coupled with accurate model monitoring techniques. This approach allows for a qualitative and quantitative analysis of landscape evolution in response to active deformation in the three end-member geological settings: compression, extension, and strike–slip.Experimental results outline first that experimental morphologies evolve significantly at a short time scale. Numerous morphologic markers form continuously, but their lifetime is generally short because erosion and sedimentation processes tend to destroy or bury them. For the compressional setting, the formation of terraces above an active thrust appears mainly controlled by narrowing and incision of the main channel through the uplifting hanging-wall and by avulsion of deposits on fan-like bodies. Terrace formation is irregular even under steady tectonic rates and erosional conditions. Terrace deformation analysis allows retrieving the growth history of the structure and the fault slip rate evolution. For the extensional setting, the dynamics of hanging-wall sedimentary filling appears to control the position of the base level, which in turn controls footwall erosion. Two phases of relief evolution can be evidenced: the first is a phase of relief growth, and the second is a phase of upstream propagation of topographic equilibrium that is reached first in the sedimentary basin. During the phase of relief growth, the formation of triangular facets occurs by degradation of the fault scarp, and their geometry (height) becomes stationary during the phase of upstream propagation of the topographic equilibrium. For the strike–slip setting, the complex morphology of the wrench zone, composed of several interacting fault segments, enhances the interactions with the drainage network. Because of the widening of the main fault zone toward the surface, a significant amount of distributed deformation is observed along the wrench zone. Locally, where two terminations of fault segments interact, less than a quarter of the far field displacement can remain measurable using fault offsets, leading to a systematic underestimation of the real fault slip rate.These different experimental examples illustrate the great potential of the approach coupling deformation mechanisms and erosion–transport–sedimentation processes to investigate qualitatively and quantitatively the morphotectonic evolution of tectonically controlled landscapes.
ISSN: 0169-555X

hal-01243587
https://hal.archives-ouvertes.fr/hal-01243587
DOI : 10.1016/j.geomorph.2015.02.011

Éditeur(s) : AGU
Résumé : Submarine canyons are narrow but deep submarine valleys that extend for hundreds of meters. They represent the most impressive structures that shape the present morphology of passive continental margins. They can occur off the mouth of rivers: the Tagus, Zaire, Amazon, and Orinoco in the Atlantic; the Indus in the Indian Ocean; and the Var, Rhone, and Ebro in the Mediterranean. Some are at times disconnected from any stream mouth such as the Nazare canyon, off Portugal, despite the fact that it is close to the coast. Some were connected to a river mouth during lowstands of sea level, such as the Wilmington canyon in the northwest Atlantic, or the Blackmud canyon in the northeast Atlantic.
EOS, Transactions American Geophysical Union (0096-3941) (AGU), 2004-07-06 , Vol. 85 , N. 27 , P. 257

Droits : 2004 AGU
http://archimer.ifremer.fr/doc/00071/18201/15769.pdf
DOI:10.1029/2004EO270001
http://archimer.ifremer.fr/doc/00071/18201/

Éditeur(s) : HAL CCSD Société géologique de France
Résumé : The mechanical equilibrium of an orogenic wedge is maintained thanks to interactions between tectonic processes and surface processes. To better constrain the influence of erosion and sedimentation on the evolution of orogens, we performed a series of analogue models based on the tapered wedge principle, varying the amounts of erosion and sedimentation. The models develop by frontal accretion in the foreland basin and by simple underthrusting and subsequent underplating in the hinterland. The variations in rates of erosion and sedimentation strongly modify the extent, the morphology, the structures, the timing of development and the material paths in the different models. Under certain conditions, entire structural units can be formed and subsequently eroded out of the geological record, leading to important underestimations when restoring sections. Particles located in the converging lower-plate or in the upper-plate show complex uplift paths related to tectonic stages. The correlation between models and three Alpine tectonic cross-sections emphasizes the role of erosion and sedimentation on the dynamics and development of the orogen and adjacent Molasse basin. Along strike changes in the present structure of the orogen could be explained in part by differences in surface processes.
EISSN: 1777-5817

hal-00411140
https://hal.archives-ouvertes.fr/hal-00411140
DOI : 10.2113/gssgfbull.3.297