Éditeur(s) : HAL CCSD American Institute of Mathematical Sciences
Résumé : International audience
In this paper, shape optimization tools are applied to coastal engineering. A barred beach protection study is described, using a new type of water wave attenuator device, namely geotextile tube, to reduce the mobilization of sediments. A global optimization algorithm, able to pursue beyond local minima, is used to search for the optimum properties of the geotextile tube. The optimal configuration is then post-validated for generated currents.
ISSN: 1531-3492

hal-00475636
https://hal.archives-ouvertes.fr/hal-00475636
DOI : 10.3934/dcdsb.2010.13.759

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
The paper presents coastal structures design in the presence of waves by the minimization of a cost function. It aims to show that shape optimization can be efficiently applied to ocean engineering. This is an underlying guiding principle for the design of harbors or offshore breakwaters. We compute the solution of a specific simplified boundary value problem describing the short wave propagation toward a vertical sea cliff or vertical wall and modify accordingly the shape of defense structures in order to minimize a pre-defined cost function taking into account the strength (energy) of the water waves. The optimization procedure relies on a global semi-deterministic search algorithm able to escape from local minima.
ISSN: 0378-3839

hal-00411905
https://hal.archives-ouvertes.fr/hal-00411905
DOI : 10.1016/j.coastaleng.2007.06.006

Éditeur(s) : HAL CCSD Editions Paralia CFL
Résumé : Des techniques d'optimisation de formes sont utilisées dans des problèmes du Génie Côtier pour la protection des plages. En collaboration avec le bureau d'étude Bas-Rhône Languedoc ingénierie, un projet d'aménagement concret de la plage du Lido de Sète, utilisant des ouvrages immergés en géotextile, a été étudié. Des solutions optimales, visant à réduire la mise en suspension des sédiments, pour les structures de défenses ont été obtenues à partir d'un modèle hydrodynamique de propagation de houle. Une étude complémentaire à partir d'un modèle de circulation et des travaux expérimentaux en canal à houle permettent ensuite de valider les résultats optimaux numériques obtenus. Shape optimization techniques, focusing on coastal structures design, are used to solve coastal engineering problem. In collaboration with the Bas-Rhône Languedoc engineering Company, a actual development plan concerning the beach of the Lido of Sète has been studied. Optimal solutions, aimed at reducing sediments suspended, for defense structures have been obtained with a hydrodynamic water wave model. An additional study using a circulation model and experimental works in flume tend to validate optimal numerical results.
ISSN: 1760-8716

hal-00854031
https://hal.archives-ouvertes.fr/hal-00854031
DOI : 10.5150/jngcgc.2008.025-I

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
We show how to introduce the Value at Risk (VaR) concept in the analysis of the adaptation of the shape of a soft bed to a flow knowing the Probability Density Function (PDF) of the responses of the shape to flow perturbations (bed receptivity). Our aim is to quantify our confidence on simulation scenarios by an available morphodynamic model for the shape. The approach permits to perform this task at low complexity as it does not require any sampling of the bed receptivity parameter space. The paper goes beyond stationarity for the variability of the bed receptivity by linking its dynamics to the bottom morphodynamics through an original transport equation for the local bed receptivity standard deviation. The approach has been applied to the analysis of bed morphodynamics based on minimization principles. The results show the importance of including uncertainty information during the coupling and not only eventually through simple margins on the results.
ISSN: 0045-7930

hal-01054937
https://hal.archives-ouvertes.fr/hal-01054937
https://hal.archives-ouvertes.fr/hal-01054937/document
https://hal.archives-ouvertes.fr/hal-01054937/file/paper_var_litto.pdf
DOI : 10.1016/j.compfluid.2013.10.021

Éditeur(s) : HAL CCSD Public Library of Science
Résumé : International audience
Plant-ants live in a mutualistic association with host plants known as "myrmecophytes" that provide them with a nesting place and sometimes with extra-floral nectar (EFN) and/or food bodies (FBs); the ants can also attend sap-sucking Hemiptera for their honeydew. In return, plant-ants, like most other arboreal ants, protect their host plants from defoliators. To satisfy their nitrogen requirements, however, some have optimized their ability to capture prey in the restricted environment represented by the crowns of trees by using elaborate hunting techniques. In this study, we investigated the predatory behavior of the ant Azteca andreae which is associated with the myrmecophyte Cecropia obtusa. We noted that up to 8350 ant workers per tree hide side-by-side beneath the leaf margins of their host plant with their mandibles open, waiting for insects to alight. The latter are immediately seized by their extremities, and then spread-eagled; nestmates are recruited to help stretch, carve up and transport prey. This group ambush hunting technique is particularly effective when the underside of the leaves is downy, as is the case for C. obtusa. In this case, the hook-shaped claws of the A. andreae workers and the velvet-like structure of the underside of the leaves combine to act like natural Velcro that is reinforced by the group ambush strategy of the workers, allowing them to capture prey of up to 13,350 times the mean weight of a single worker.
ISSN: 1932-6203

hal-00818187
https://hal.archives-ouvertes.fr/hal-00818187
https://hal.archives-ouvertes.fr/hal-00818187/document
https://hal.archives-ouvertes.fr/hal-00818187/file/Dejean2010_Arboreal.pdf
DOI : 10.1371/journal.pone.0011331

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Meconium is the first fecal excretion of newborns. This complex accumulative matrix allows assessing the exposure of the fetus to xenobiotics during the last 6 months of pregnancy. To determine the eventual effect of fetal exposure to micropollutants in this matrix, robust and sensitive analytical methods must be developed. This article describes the method development of liquid chromatography methods coupled to triple quadrupole mass spectrometry for relevant pollutants. The 28 selected target compounds had different physico-chemical properties from very polar (glyphosate) to non-polar molecules (pyrethroids). Tests were performed with three different types of columns: reversed phase, ion exchange and HILIC. As a unique method could not be determined for the simultaneous analysis of all compounds, three columns were selected and suitable chromatographic methods were optimized. Similar results were noticed for the separation of the target compounds dissolved in either meconium extract or solvent for reversed phase and ion exchange columns. However, for HILIC, the matrix had a significant influence on the peak shape and robustness of the method. Finally, the analytical methods were applied to “real” meconium samples.
ISSN: 0039-9140

hal-01141722
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01141722
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01141722/document
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01141722/file/Development%20of%20liquid%20chromatography%20%281%29.pdf
PUBMED : 25863396

Éditeur(s) : HAL CCSD Wiley
Résumé : International audience
This paper describes how to tackle new challenging coastal engineering problems related to beach erosion with a shape optimization approach. The method modifies the shape of the sea bottom in order to reduce beach erosion effects. Global optimization is shown to be necessary as the related functionals have several local minima. We describe the physical model used, the proposed protection devices against beach erosion and real case applications.
ISSN: 0029-5981

hal-00411912
https://hal.archives-ouvertes.fr/hal-00411912
DOI : 10.1002/nme.2209

Éditeur(s) : HAL CCSD Microbiology Society
Résumé : International audience
An actinobacterial strain, designated ViU22(T), was isolated from a natural uranium-rich soil and was studied using a polyphasic approach. Cells formed orange-pigmented colonies, were rod-shaped, Gram-positive (non-staining method), non-motile and non-spore-forming. This organism grew in 0-4.5 % (w/v) NaCl and at 15-37 °C, with optimal growth occurring in 0.5 % (w/v) NaCl and at 30 °C. Comparative 16S rRNA gene sequence analysis revealed that the strain ViU22(T) belonged to the genus Microbacterium. It exhibited highest 16S rRNA gene sequence similarity with the type strains of Microbacterium testaceum (98.14 %) and Microbacterium binotii (98.02 %). The DNA-DNA relatedness of strains ViU22(T) with the most closely related type strains Microbacterium testaceum and Microbacterium binotii DSM 19164(T) was 20.10 % (± 0.70) and 28.05 % (± 0.35), respectively. Strain ViU22(T) possessed a type B2β peptidoglycan with partial substitution of glutamic acid by 3-hydroxy glutamic acid. The major menaquinones were MK-11 and MK-12. Major polar lipids detected in the strain ViU22(T) were diphosphatidylglycerol, phosphatidylglycerol, an unknown phospholipid and unknown glycolipids. The predominant fatty acids were anteiso-C15 : 0, anteiso-C17 : 0 and iso-C16 : 0, a pattern reported for other Microbacterium species. The major cell-wall sugars were galactose, xylose and mannose and the DNA G+C content was 71 mol%. Together, the DNA-DNA hybridization results and the differentiating phenotypic characteristics, showed that strain ViU22(T) should be classified as the type strain of a novel species within the genus Microbacterium, for which the name Microbacterium lemovicicum sp. nov. is proposed. The type strain is ViU22(T) ( = ATCC BAA-2396(T) = CCUG 62198(T) = DSM 25044(T)).
ISSN: 1466-5026

hal-01561095
https://hal-amu.archives-ouvertes.fr/hal-01561095
PUBMED : 23264499
DOI : 10.1099/ijs.0.048454-0

Éditeur(s) : HAL CCSD Oxford University Press (OUP)
Résumé : International audience
Conflict between mates, as well as conflict between parents and offspring are due to divergent evolutionary interests of the interacting individuals. Hormone systems provide genetically based proximate mechanisms for mediating phenotypic adaptation and maladaptation characteristic of evolutionary conflict between individuals. Testosterone (T) is among the most commonly studied hormones in evolutionary biology, and as such, its role in shaping sexually dimorphic behaviors and physiology is relatively well understood, but its role in evolutionary conflict is not as clear. In this review, we outline the genomic conflicts arising within the family unit, and incorporate multiple lines of evidence from the bank vole (Myodes glareolus) system to outline how T impacts traits associated with reproduction and survival, resulting in a sexually antagonistic genetic trade-off in fitness. A major prediction arising from this work is that lower T is favored in females, whereas the optimal T level in males fluctuates in relation to social and ecological factors. We additionally discuss future directions to further integrate endocrinology into the study of sexual and parent–offspring conflicts.
ISSN: 1540-7063

hal-01357902
https://hal-univ-perp.archives-ouvertes.fr/hal-01357902
DOI : 10.1093/icb/icw053

Éditeur(s) : HAL CCSD Elsevier Masson
Résumé : 14 pages
International audience
Central Africa hosts the world's second largest tropical forest after the Amazonian basin. However, as compared to its Amazonian counterpart, the Central Africa forests receive much less rain (∼1500 mm/year in mean spread over two rainy seasons in March-May and September-November, and two dry seasons). They also experience a slower deforestation rate, so that the main threat for the next decades might come from climate variations. Nonetheless, their response to the annual cycle of solar radiation and rainfall/clouds is still poorly known. Analysing high resolution remote sensing data of Enhanced Vegetation Index, rainfall, cloudiness, and solar radiation for a target region located between 0 and 5°N and 12–19°E, we explore the climatic drivers of the forests greenness mean annual cycle. Three main points emerge; first, the diurnal cycle is a key-scale for understanding the mean annual cycles of rainfall and incoming solar radiation at surface, then how climate shapes the greenness mean annual evolution; second, neither the two dry seasons nor the two rainy seasons resemble each other in terms of cloud cover, solar radiation and rainfall, and their links with greenness levels; third, whereas the first rainy season (March-May) appears optimal for greenness especially because of favorable light conditions, water availability is the main controlling factor during the main dry season and at the start of the first vegetative season (February). Regarding the little dry season (mid-June-mid-August) and the second rainy season (September-October), light availability might be the main limiting factor. These findings pave the way for further studies of the climate interannual variability and change impacts on the Central Africa forests, taking into account time-scale interactions.
ISSN: 0168-1923

hal-01309565
https://hal.archives-ouvertes.fr/hal-01309565
DOI : 10.1016/j.agrformet.2016.04.005